ES2869292T3 - Cartografía rápida y exacta de lecturas de secuenciación dirigida - Google Patents
Cartografía rápida y exacta de lecturas de secuenciación dirigida Download PDFInfo
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- ES2869292T3 ES2869292T3 ES13795516T ES13795516T ES2869292T3 ES 2869292 T3 ES2869292 T3 ES 2869292T3 ES 13795516 T ES13795516 T ES 13795516T ES 13795516 T ES13795516 T ES 13795516T ES 2869292 T3 ES2869292 T3 ES 2869292T3
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- 238000012163 sequencing technique Methods 0.000 title claims abstract description 67
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Classifications
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
- G16B30/10—Sequence alignment; Homology search
-
- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
Landscapes
- Physics & Mathematics (AREA)
- Life Sciences & Earth Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Analytical Chemistry (AREA)
- Biophysics (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Bioinformatics & Computational Biology (AREA)
- Biotechnology (AREA)
- Evolutionary Biology (AREA)
- General Health & Medical Sciences (AREA)
- Medical Informatics (AREA)
- Spectroscopy & Molecular Physics (AREA)
- Theoretical Computer Science (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Apparatus Associated With Microorganisms And Enzymes (AREA)
Applications Claiming Priority (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US13/689,314 US9218450B2 (en) | 2012-11-29 | 2012-11-29 | Accurate and fast mapping of reads to genome |
| PCT/EP2013/074799 WO2014083023A1 (en) | 2012-11-29 | 2013-11-27 | Accurate and fast mapping of targeted sequencing reads |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| ES2869292T3 true ES2869292T3 (es) | 2021-10-25 |
Family
ID=49641777
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| ES13795516T Active ES2869292T3 (es) | 2012-11-29 | 2013-11-27 | Cartografía rápida y exacta de lecturas de secuenciación dirigida |
Country Status (7)
| Country | Link |
|---|---|
| US (2) | US9218450B2 (cg-RX-API-DMAC7.html) |
| EP (1) | EP2926288B1 (cg-RX-API-DMAC7.html) |
| JP (1) | JP6240210B2 (cg-RX-API-DMAC7.html) |
| CN (1) | CN104937598B (cg-RX-API-DMAC7.html) |
| CA (1) | CA2891731C (cg-RX-API-DMAC7.html) |
| ES (1) | ES2869292T3 (cg-RX-API-DMAC7.html) |
| WO (1) | WO2014083023A1 (cg-RX-API-DMAC7.html) |
Families Citing this family (25)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| EP2697397B1 (en) | 2011-04-15 | 2017-04-05 | The Johns Hopkins University | Safe sequencing system |
| WO2014070462A1 (en) | 2012-10-29 | 2014-05-08 | The Johns Hopkins University | Papanicolaou test for ovarian and endometrial cancers |
| US10216895B2 (en) * | 2014-05-12 | 2019-02-26 | Roche Molecular Systems, Inc. | Rare variant calls in ultra-deep sequencing |
| ES2898435T3 (es) * | 2014-09-03 | 2022-03-07 | Otsuka Pharma Co Ltd | Dispositivo de ayuda para la determinación de patología, método, programa y medio de almacenamiento |
| US20160125130A1 (en) * | 2014-11-05 | 2016-05-05 | Agilent Technologies, Inc. | Method for assigning target-enriched sequence reads to a genomic location |
| US9857328B2 (en) | 2014-12-18 | 2018-01-02 | Agilome, Inc. | Chemically-sensitive field effect transistors, systems and methods for manufacturing and using the same |
| EP3235010A4 (en) | 2014-12-18 | 2018-08-29 | Agilome, Inc. | Chemically-sensitive field effect transistor |
| US10020300B2 (en) | 2014-12-18 | 2018-07-10 | Agilome, Inc. | Graphene FET devices, systems, and methods of using the same for sequencing nucleic acids |
| US9618474B2 (en) | 2014-12-18 | 2017-04-11 | Edico Genome, Inc. | Graphene FET devices, systems, and methods of using the same for sequencing nucleic acids |
| US10006910B2 (en) | 2014-12-18 | 2018-06-26 | Agilome, Inc. | Chemically-sensitive field effect transistors, systems, and methods for manufacturing and using the same |
| US9859394B2 (en) | 2014-12-18 | 2018-01-02 | Agilome, Inc. | Graphene FET devices, systems, and methods of using the same for sequencing nucleic acids |
| US20160300013A1 (en) * | 2015-04-10 | 2016-10-13 | Agilent Technologies, Inc. | METHOD FOR SIMULTANEOUS DETECTION OF GENOME-WIDE COPY NUMBER CHANGES, cnLOH, INDELS, AND GENE MUTATIONS |
| US10395759B2 (en) | 2015-05-18 | 2019-08-27 | Regeneron Pharmaceuticals, Inc. | Methods and systems for copy number variant detection |
| JP6675164B2 (ja) * | 2015-07-28 | 2020-04-01 | 株式会社理研ジェネシス | 変異判定方法、変異判定プログラムおよび記録媒体 |
| US11286531B2 (en) | 2015-08-11 | 2022-03-29 | The Johns Hopkins University | Assaying ovarian cyst fluid |
| JP6765433B2 (ja) | 2016-02-12 | 2020-10-07 | リジェネロン・ファーマシューティカルズ・インコーポレイテッドＲｅｇｅｎｅｒｏｎ Ｐｈａｒｍａｃｅｕｔｉｃａｌｓ， Ｉｎｃ． | 異常な核型の検出のための方法 |
| WO2017201081A1 (en) | 2016-05-16 | 2017-11-23 | Agilome, Inc. | Graphene fet devices, systems, and methods of using the same for sequencing nucleic acids |
| MX2019000762A (es) * | 2016-07-21 | 2019-10-30 | Walmart Apollo Llc | Caracterizaciones basadas en vectores de productos e individuos con respecto a la seleccion de articulos para ubicaciones de tiendas. |
| IL319255A (en) | 2017-08-07 | 2025-04-01 | Univ Johns Hopkins | Methods and materials for cancer assessment and treatment |
| JP7320345B2 (ja) * | 2017-10-27 | 2023-08-03 | シスメックス株式会社 | 遺伝子解析方法、遺伝子解析装置、遺伝子解析システム、プログラム、および記録媒体 |
| JP7054133B2 (ja) | 2017-11-09 | 2022-04-13 | 国立研究開発法人国立がん研究センター | 配列解析方法、配列解析装置、参照配列の生成方法、参照配列生成装置、プログラム、および記録媒体 |
| US10854317B2 (en) * | 2017-12-29 | 2020-12-01 | Act Genomics Co., Ltd. | Method and system for sequence alignment and variant calling |
| WO2021163546A1 (en) | 2020-02-14 | 2021-08-19 | The Johns Hopkins University | Methods and materials for assessing nucleic acids |
| CN111477274B (zh) * | 2020-04-02 | 2020-11-24 | 上海之江生物科技股份有限公司 | 微生物目标片段中特异性区域的识别方法、装置及应用 |
| KR20230009877A (ko) * | 2020-05-08 | 2023-01-17 | 일루미나, 인코포레이티드 | 게놈 서열분석 및 검출 기술 |
Family Cites Families (8)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| UY24389A1 (es) * | 1995-12-06 | 2001-10-25 | Karlsruhe Forschzent | Composición farmacéutica para el tratamiento de carcinoma de epitelio plano |
| US7809509B2 (en) | 2001-05-08 | 2010-10-05 | Ip Genesis, Inc. | Comparative mapping and assembly of nucleic acid sequences |
| US20030138778A1 (en) * | 2001-11-30 | 2003-07-24 | Garner Harold R. | Prediction of disease-causing alleles from sequence context |
| US20040229269A1 (en) | 2003-05-15 | 2004-11-18 | Ghazala Hashmi | Hybridization-mediated analysis of polymorphisms |
| CA2563694C (en) * | 2004-04-23 | 2014-01-07 | Oxonica, Inc. | Surface enhanced spectroscopy-active composite nanoparticles |
| CN1277924C (zh) * | 2004-06-25 | 2006-10-04 | 湖南西城杂交水稻基因科技有限公司 | 利用可转化大片段基因组文库发掘野生稻有利基因的方法 |
| US20140066317A1 (en) * | 2012-09-04 | 2014-03-06 | Guardant Health, Inc. | Systems and methods to detect rare mutations and copy number variation |
| KR102393608B1 (ko) * | 2012-09-04 | 2022-05-03 | 가던트 헬쓰, 인크. | 희귀 돌연변이 및 카피수 변이를 검출하기 위한 시스템 및 방법 |
-
2012
- 2012-11-29 US US13/689,314 patent/US9218450B2/en active Active
-
2013
- 2013-11-27 JP JP2015544446A patent/JP6240210B2/ja active Active
- 2013-11-27 CA CA2891731A patent/CA2891731C/en active Active
- 2013-11-27 WO PCT/EP2013/074799 patent/WO2014083023A1/en not_active Ceased
- 2013-11-27 EP EP13795516.7A patent/EP2926288B1/en active Active
- 2013-11-27 ES ES13795516T patent/ES2869292T3/es active Active
- 2013-11-27 CN CN201380062074.1A patent/CN104937598B/zh active Active
-
2015
- 2015-11-30 US US14/954,808 patent/US10127351B2/en active Active
Also Published As
| Publication number | Publication date |
|---|---|
| CN104937598A (zh) | 2015-09-23 |
| EP2926288B1 (en) | 2021-03-17 |
| US20140149049A1 (en) | 2014-05-29 |
| JP2015536661A (ja) | 2015-12-24 |
| CN104937598B (zh) | 2017-11-07 |
| CA2891731A1 (en) | 2014-06-05 |
| US10127351B2 (en) | 2018-11-13 |
| CA2891731C (en) | 2017-09-12 |
| US9218450B2 (en) | 2015-12-22 |
| WO2014083023A1 (en) | 2014-06-05 |
| US20160092630A1 (en) | 2016-03-31 |
| JP6240210B2 (ja) | 2017-11-29 |
| EP2926288A1 (en) | 2015-10-07 |
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