ES2844852T3 - Acidos nucleicos bloqueados para capturar genes de fusión - Google Patents

Acidos nucleicos bloqueados para capturar genes de fusión Download PDF

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Publication number
ES2844852T3
ES2844852T3 ES16828575T ES16828575T ES2844852T3 ES 2844852 T3 ES2844852 T3 ES 2844852T3 ES 16828575 T ES16828575 T ES 16828575T ES 16828575 T ES16828575 T ES 16828575T ES 2844852 T3 ES2844852 T3 ES 2844852T3
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Prior art keywords
nucleotides
length
polynucleotide
probe
polynucleotides
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ES16828575T
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English (en)
Spanish (es)
Inventor
Stefanie Ann Ward Mortimer
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Guardant Health Inc
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Guardant Health Inc
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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • C12Q1/6886Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6827Hybridisation assays for detection of mutation or polymorphism
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/156Polymorphic or mutational markers
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/158Expression markers

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  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Immunology (AREA)
  • Analytical Chemistry (AREA)
  • Genetics & Genomics (AREA)
  • Physics & Mathematics (AREA)
  • Pathology (AREA)
  • Biotechnology (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • General Health & Medical Sciences (AREA)
  • General Engineering & Computer Science (AREA)
  • Biophysics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Oncology (AREA)
  • Hospice & Palliative Care (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
ES16828575T 2015-07-21 2016-07-21 Acidos nucleicos bloqueados para capturar genes de fusión Active ES2844852T3 (es)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US201562195280P 2015-07-21 2015-07-21
PCT/US2016/043430 WO2017015513A1 (en) 2015-07-21 2016-07-21 Locked nucleic acids for capturing fusion genes

Publications (1)

Publication Number Publication Date
ES2844852T3 true ES2844852T3 (es) 2021-07-22

Family

ID=57835293

Family Applications (1)

Application Number Title Priority Date Filing Date
ES16828575T Active ES2844852T3 (es) 2015-07-21 2016-07-21 Acidos nucleicos bloqueados para capturar genes de fusión

Country Status (7)

Country Link
US (3) US20190071730A9 (show.php)
EP (2) EP3325667B1 (show.php)
JP (1) JP7074661B2 (show.php)
CN (1) CN108138230B (show.php)
AU (1) AU2016297096B2 (show.php)
ES (1) ES2844852T3 (show.php)
WO (1) WO2017015513A1 (show.php)

Families Citing this family (18)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP3246416B1 (en) 2011-04-15 2024-06-05 The Johns Hopkins University Safe sequencing system
EP2912468B1 (en) 2012-10-29 2018-09-12 The Johns Hopkins University Papanicolaou test for ovarian and endometrial cancers
WO2017027653A1 (en) 2015-08-11 2017-02-16 The Johns Hopkins University Assaying ovarian cyst fluid
ES2840003T3 (es) 2016-09-30 2021-07-06 Guardant Health Inc Métodos para análisis multi-resolución de ácidos nucleicos libres de células
US9850523B1 (en) 2016-09-30 2017-12-26 Guardant Health, Inc. Methods for multi-resolution analysis of cell-free nucleic acids
CN110832076B (zh) * 2017-06-27 2024-05-17 国立大学法人东京大学 用于检测由融合基因和/或外显子跳跃产生的转录产物的探针以及方法
CA3072195A1 (en) 2017-08-07 2019-04-04 The Johns Hopkins University Methods and materials for assessing and treating cancer
CN108642159B (zh) * 2018-06-27 2022-07-01 上海宏滩生物科技有限公司 生物芯片检测系统
EP4567131A3 (en) 2019-01-31 2025-09-03 Guardant Health, Inc. Compositions and methods for isolating cell-free dna
EP3938505A4 (en) * 2019-02-25 2022-11-30 Twist Bioscience Corporation COMPOSITIONS AND METHODS FOR SEQUENCING THE NEXT GENERATION
CN110195098A (zh) * 2019-05-10 2019-09-03 广州安必平医药科技股份有限公司 用于检测braf相关融合基因的探针组、试剂盒及其应用
WO2021061842A1 (en) 2019-09-23 2021-04-01 Twist Bioscience Corporation Variant nucleic acid libraries for single domain antibodies
MX2022010038A (es) 2020-02-14 2022-09-05 Univ Johns Hopkins Metodos y materiales para la evaluacion de acidos nucleicos.
US11211144B2 (en) 2020-02-18 2021-12-28 Tempus Labs, Inc. Methods and systems for refining copy number variation in a liquid biopsy assay
US11211147B2 (en) 2020-02-18 2021-12-28 Tempus Labs, Inc. Estimation of circulating tumor fraction using off-target reads of targeted-panel sequencing
US11475981B2 (en) 2020-02-18 2022-10-18 Tempus Labs, Inc. Methods and systems for dynamic variant thresholding in a liquid biopsy assay
CN114958997B (zh) * 2020-08-31 2025-08-22 伯科生物科技有限公司 用于检测伴侣基因的方法
CN116240268B (zh) * 2023-02-27 2024-04-26 北京大学口腔医学院 用于检测多个基因重排探针系统

Family Cites Families (17)

* Cited by examiner, † Cited by third party
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US5482834A (en) * 1982-05-17 1996-01-09 Hahnemann University Evaluation of nucleic acids in a biological sample hybridization in a solution of chaotrophic salt solubilized cells
US5200313A (en) * 1983-08-05 1993-04-06 Miles Inc. Nucleic acid hybridization assay employing detectable anti-hybrid antibodies
US6582908B2 (en) * 1990-12-06 2003-06-24 Affymetrix, Inc. Oligonucleotides
EP2164995A2 (en) * 2007-06-27 2010-03-24 Oslo Universitetssykehus HF Fusion gene microarray
CN101928767A (zh) * 2009-06-29 2010-12-29 林新华 用于检测慢性粒细胞白血病bcr/abl融合基因的电化学dna生物传感器
EP2494069B1 (en) * 2009-10-30 2013-10-02 Roche Diagniostics GmbH Method for detecting balanced chromosomal aberrations in a genome
WO2011146403A2 (en) * 2010-05-16 2011-11-24 Reniguard Life Sciences, Inc. Identification of polymorphic hepatitis b viruses and kras oncogene mutations and clinical use
JP5840708B2 (ja) * 2011-03-14 2016-01-06 ヴェンタナ メディカル システムズ, インク. 染色体転座を解析する方法及びそのシステム
CN103930563B (zh) * 2011-06-01 2016-11-09 医学预后研究所 用于预测癌症复发的方法和装置
AU2011372509B2 (en) * 2011-07-01 2017-02-09 Htg Molecular Diagnostics, Inc. Methods of detecting gene fusions
WO2013119950A2 (en) * 2012-02-08 2013-08-15 Insight Genetics, Inc. Methods and compositions relating to fusions of ros1 for diagnosing and treating cancer
US9512477B2 (en) * 2012-05-04 2016-12-06 Boreal Genomics Inc. Biomarker anaylsis using scodaphoresis
EP4424826A3 (en) 2012-09-04 2024-11-27 Guardant Health, Inc. Systems and methods to detect rare mutations and copy number variation
EP2971168B1 (en) 2013-03-15 2021-05-05 Guardant Health, Inc. Method of detecting cancer
EP3795696B1 (en) * 2013-03-15 2023-04-26 The Board of Trustees of the Leland Stanford Junior University Identification and use of circulating nucleic acid tumor markers
AU2014254394B2 (en) * 2013-04-17 2020-06-18 Life Technologies Corporation Gene fusions and gene variants associated with cancer
EP3378952B1 (en) * 2013-12-28 2020-02-05 Guardant Health, Inc. Methods and systems for detecting genetic variants

Also Published As

Publication number Publication date
AU2016297096A1 (en) 2018-02-15
EP3828292A1 (en) 2021-06-02
US20220411877A1 (en) 2022-12-29
EP3325667A1 (en) 2018-05-30
WO2017015513A9 (en) 2018-04-12
US20180195131A1 (en) 2018-07-12
JP7074661B2 (ja) 2022-05-25
CA2993019A1 (en) 2017-01-26
JP2018524014A (ja) 2018-08-30
US20170226590A1 (en) 2017-08-10
US20190071730A9 (en) 2019-03-07
AU2016297096B2 (en) 2021-03-18
EP3325667B1 (en) 2020-11-11
CN108138230A (zh) 2018-06-08
AU2016297096A9 (en) 2019-07-25
EP3325667A4 (en) 2018-12-19
CN108138230B (zh) 2023-03-10
WO2017015513A1 (en) 2017-01-26

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