DE602007009233D1 - Genomische kartierung mit hohem durchsatz unter verwendung von aflp - Google Patents

Genomische kartierung mit hohem durchsatz unter verwendung von aflp

Info

Publication number
DE602007009233D1
DE602007009233D1 DE602007009233T DE602007009233T DE602007009233D1 DE 602007009233 D1 DE602007009233 D1 DE 602007009233D1 DE 602007009233 T DE602007009233 T DE 602007009233T DE 602007009233 T DE602007009233 T DE 602007009233T DE 602007009233 D1 DE602007009233 D1 DE 602007009233D1
Authority
DE
Germany
Prior art keywords
restriction fragments
ligated
aflp
speed
sample
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Active
Application number
DE602007009233T
Other languages
English (en)
Inventor
Eijk Michael Josephus Van
Taco Peter Jesse
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Keygene NV
Original Assignee
Keygene NV
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Keygene NV filed Critical Keygene NV
Publication of DE602007009233D1 publication Critical patent/DE602007009233D1/de
Active legal-status Critical Current
Anticipated expiration legal-status Critical

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C12Q1/6874—Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Analytical Chemistry (AREA)
  • Biotechnology (AREA)
  • Physics & Mathematics (AREA)
  • Biophysics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Immunology (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Thin Film Transistor (AREA)
  • Catalysts (AREA)
  • Ultra Sonic Daignosis Equipment (AREA)
  • Surface Acoustic Wave Elements And Circuit Networks Thereof (AREA)
  • Signal Processing For Digital Recording And Reproducing (AREA)
  • Measurement And Recording Of Electrical Phenomena And Electrical Characteristics Of The Living Body (AREA)
  • Magnetic Resonance Imaging Apparatus (AREA)
DE602007009233T 2006-07-12 2007-07-10 Genomische kartierung mit hohem durchsatz unter verwendung von aflp Active DE602007009233D1 (de)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US83012106P 2006-07-12 2006-07-12
PCT/NL2007/000177 WO2008007951A1 (en) 2006-07-12 2007-07-10 High throughput physical mapping using aflp

Publications (1)

Publication Number Publication Date
DE602007009233D1 true DE602007009233D1 (de) 2010-10-28

Family

ID=38572835

Family Applications (1)

Application Number Title Priority Date Filing Date
DE602007009233T Active DE602007009233D1 (de) 2006-07-12 2007-07-10 Genomische kartierung mit hohem durchsatz unter verwendung von aflp

Country Status (10)

Country Link
US (6) US8178300B2 (de)
EP (4) EP2182079B1 (de)
JP (3) JP5491177B2 (de)
CN (2) CN101484589B (de)
AT (1) ATE481506T1 (de)
DE (1) DE602007009233D1 (de)
DK (1) DK2038425T3 (de)
ES (1) ES2352987T3 (de)
PL (1) PL2038425T3 (de)
WO (1) WO2008007951A1 (de)

Families Citing this family (16)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP2121983A2 (de) 2007-02-02 2009-11-25 Illumina Cambridge Limited Verfahren zur kennzeichnung von proben und sequenzierung mehrerer nukleotidmatrizen
EP2379751B1 (de) * 2009-01-13 2013-03-20 Keygene N.V. Neue genomsequenzierungsstrategien
EP2248914A1 (de) * 2009-05-05 2010-11-10 Max-Planck-Gesellschaft zur Förderung der Wissenschaften e.V. Die Verwendung von IIB-Restriktionsendonukleasen in Sequenzierungsanwendungen der zweiten Generation
WO2011071382A1 (en) 2009-12-10 2011-06-16 Keygene N.V. Polymorfphic whole genome profiling
AU2010330936B2 (en) * 2009-12-17 2014-05-22 Keygene N.V. Restriction enzyme based whole genome sequencing
WO2012008831A1 (en) 2010-07-13 2012-01-19 Keygene N.V. Simplified de novo physical map generation from clone libraries
US9029103B2 (en) 2010-08-27 2015-05-12 Illumina Cambridge Limited Methods for sequencing polynucleotides
CN101967684B (zh) * 2010-09-01 2013-02-27 深圳华大基因科技有限公司 一种测序文库及其制备方法、一种末端测序方法和装置
WO2014047561A1 (en) 2012-09-21 2014-03-27 The Broad Institute Inc. Compositions and methods for labeling of agents
EP2898071A4 (de) * 2012-09-21 2016-07-20 Broad Inst Inc Zusammensetzungen und verfahren für bibliotheken mit langem einsatz und gepaartem ende von nukleinsäuren in emulsionstropfen
EP2959011A1 (de) * 2013-02-19 2015-12-30 Cergentis B.V. Sequenzierungsstrategien für relevante genombereiche
WO2014143158A1 (en) * 2013-03-13 2014-09-18 The Broad Institute, Inc. Compositions and methods for labeling of agents
DE102014200446B3 (de) * 2014-01-13 2015-01-08 Technische Universität Dresden Verfahren zur Dekonvolution Nukleinsäure enthaltender Substanzgemische
US20180016631A1 (en) * 2014-12-24 2018-01-18 Keygene N.V. Backbone mediated mate pair sequencing
US11326159B2 (en) 2015-04-06 2022-05-10 The Regents Of The University Of California Methods and compositions for long-range haplotype phasing
EP3187040A1 (de) 2015-12-30 2017-07-05 Vilmorin et Cie Resistenz gegen tolcndv in melonen

Family Cites Families (28)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CZ291877B6 (cs) 1991-09-24 2003-06-18 Keygene N.V. Způsob amplifikace přinejmenším jednoho restrikčního fragmentu z výchozí DNA a způsob přípravy sestavy amplifikovaných restrikčních fragmentů
US20100267023A1 (en) 1992-09-24 2010-10-21 Keygene N.V. Selective restriction fragment amplification: fingerprinting
EP1105529B2 (de) 1998-07-30 2013-05-29 Illumina Cambridge Limited Matrizen von biomolekülen und ihre verwendung in sequenzierung
GB0002310D0 (en) 2000-02-01 2000-03-22 Solexa Ltd Polynucleotide sequencing
US6480791B1 (en) * 1998-10-28 2002-11-12 Michael P. Strathmann Parallel methods for genomic analysis
EP1131153A1 (de) 1998-11-06 2001-09-12 Solexa Ltd. Verfahren zur reproduktion von molekülarrays
WO2000058507A1 (en) 1999-03-30 2000-10-05 Solexa Ltd. Polynucleotide sequencing
EP1218543A2 (de) 1999-09-29 2002-07-03 Solexa Ltd. Polynukleotidsequenzierung
GB0002389D0 (en) 2000-02-02 2000-03-22 Solexa Ltd Molecular arrays
DE60222628T2 (de) 2001-01-30 2008-07-17 Solexa Ltd., Saffron Walden Herstellung von matrizen aus polynukleotiden
US20050009022A1 (en) 2001-07-06 2005-01-13 Weiner Michael P. Method for isolation of independent, parallel chemical micro-reactions using a porous filter
GB0119719D0 (en) 2001-08-13 2001-10-03 Solexa Ltd DNA sequence analysis
US6975943B2 (en) 2001-09-24 2005-12-13 Seqwright, Inc. Clone-array pooled shotgun strategy for nucleic acid sequencing
US6902921B2 (en) 2001-10-30 2005-06-07 454 Corporation Sulfurylase-luciferase fusion proteins and thermostable sulfurylase
US7057026B2 (en) 2001-12-04 2006-06-06 Solexa Limited Labelled nucleotides
HUE032483T2 (en) 2002-08-23 2017-09-28 Illumina Cambridge Ltd Marked nucleotides
JP2006509040A (ja) 2002-08-23 2006-03-16 ソレックサ リミテッド 修飾されたヌクレオチド
WO2004050915A1 (en) 2002-12-02 2004-06-17 Solexa Limited Determination of methylation of nucleic acid sequences
JP4690307B2 (ja) * 2003-01-10 2011-06-01 ケイヘーネ・エヌ・ブイ 物理的および遺伝的地図を統合するためのａｆｌｐに基づいた方法
EP2159285B1 (de) 2003-01-29 2012-09-26 454 Life Sciences Corporation Verfahren zur Verstärkung und Sequenzierung von Nukleinsäuren
GB0304371D0 (en) 2003-02-26 2003-04-02 Solexa Ltd DNA Sequence analysis
GB0320059D0 (en) 2003-08-27 2003-10-01 Solexa Ltd A method of sequencing
GB0326073D0 (en) 2003-11-07 2003-12-10 Solexa Ltd Improvements in or relating to polynucleotide arrays
EP3673986A1 (de) 2004-01-07 2020-07-01 Illumina Cambridge Limited Verbesserungen in oder an molekül-arrays
GB0400584D0 (en) 2004-01-12 2004-02-11 Solexa Ltd Nucleic acid chacterisation
GB0400974D0 (en) 2004-01-16 2004-02-18 Solexa Ltd Multiple inexact matching
GB0402895D0 (en) 2004-02-10 2004-03-17 Solexa Ltd Arrayed polynucleotides
CA2613248A1 (en) * 2005-06-23 2006-12-28 Keygene N.V. Improved strategies for sequencing complex genomes using high throughput sequencing technologies

Also Published As

Publication number Publication date
EP2182079B1 (de) 2014-09-10
US20130184166A1 (en) 2013-07-18
JP5491177B2 (ja) 2014-05-14
CN103333949B (zh) 2015-05-06
US20160251713A1 (en) 2016-09-01
JP2009542256A (ja) 2009-12-03
ATE481506T1 (de) 2010-10-15
CN101484589B (zh) 2013-08-14
US8975028B2 (en) 2015-03-10
US20090246780A1 (en) 2009-10-01
ES2352987T3 (es) 2011-02-24
EP2182079A1 (de) 2010-05-05
JP2014064578A (ja) 2014-04-17
US8178300B2 (en) 2012-05-15
US20140206551A1 (en) 2014-07-24
JP2013223502A (ja) 2013-10-31
CN103333949A (zh) 2013-10-02
JP5801349B2 (ja) 2015-10-28
US8394591B2 (en) 2013-03-12
EP2275576B1 (de) 2013-09-04
US8685650B2 (en) 2014-04-01
EP2275576A1 (de) 2011-01-19
DK2038425T3 (da) 2010-12-06
US9284606B2 (en) 2016-03-15
US20150148241A1 (en) 2015-05-28
CN101484589A (zh) 2009-07-15
WO2008007951A1 (en) 2008-01-17
EP2038425A1 (de) 2009-03-25
US20120108442A1 (en) 2012-05-03
PL2038425T3 (pl) 2011-03-31
EP2821506A1 (de) 2015-01-07
EP2038425B1 (de) 2010-09-15

Similar Documents

Publication Publication Date Title
DE602007009233D1 (de) Genomische kartierung mit hohem durchsatz unter verwendung von aflp
WO2007114693A3 (en) High throughput detection of molecular markers based on aflp and high throughput sequencing
PH12015501735A1 (en) Rice whole genome breeding chip and application thereof
WO2009092035A3 (en) Methods and compositions for the analysis of biological molecules
ATE522627T1 (de) Verfahren zur herstellung von nukleinsäuresonden
WO2009153775A3 (en) Methods for distinguishing between specific types of lung cancers
DE602006013831D1 (de) Verbesserte strategien zur sequenzierung komplexer genome unter verwendung von sequenziertechniken mit hohem durchsatz
ES2688623T3 (es) Proteínas de fusión que se unen a factores de crecimiento
WO2007065025A3 (en) Method of dna analysis using micro/nanochannel
ATE550430T1 (de) Aus bakterien der gattung corynebacterium stammende promoternukleinsäure , den promoter umfassende expressionskassette , den vektor umfassende wirtszelle sowie verfahren zur expression eines gens unter verwendung der zelle .
EP3431615A3 (de) Dna-sequenzierung mit nichtfluoreszierenden, reversiblen nukleotidterminatoren und spaltbaren, etikettmodifizierten nukleotidterminatoren
WO2009073201A3 (en) Alternate labeling strategies for single molecule sequencing
WO2010068289A3 (en) Classification of nucleic acid templates
WO2007010251A3 (en) Preparation of templates for nucleic acid sequencing
AU2006236363A8 (en) A method for providing DNA fragments derived from a remote sample
WO2007056250A3 (en) Heterogeneous assay of analytes in solution using polymers
WO2007100397A3 (en) Compositions for use in identification of adventitious contaminant viruses
JP2016507239A5 (de)
AU2017270377A1 (en) Tagged Multi-Nucleotides useful for Nucleic Acid sequencing
ATE513930T1 (de) Bestimmung des dna-methylierungsgrads
DK1766088T3 (da) Identificering af kromosomabnormaliteter i celler, der opnået fra follikelvæske
PT1490383E (pt) Métodos e composições para identificar e caracterizar a hepatite c
WO2010016071A3 (en) Identification of genomic signature for differentiating highly similar sequence variants of an organism
DE602004022972D1 (de) Mit cmv-resistenz assoziierter molekularer marker und verwendung davon
ES2875758T3 (es) Conjunto de cebadores y método para la detección e identificación de especies de mejillón del genero mytilus