CN110616220A - Method for improving hardness of wheat grains - Google Patents

Method for improving hardness of wheat grains Download PDF

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CN110616220A
CN110616220A CN201910953401.1A CN201910953401A CN110616220A CN 110616220 A CN110616220 A CN 110616220A CN 201910953401 A CN201910953401 A CN 201910953401A CN 110616220 A CN110616220 A CN 110616220A
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wheat
sequence
nucleic acid
acid molecule
expression cassette
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张淑娟
李根英
李玉莲
高洁
张荣志
宋国琦
李玮
刘敏
陈明丽
李吉虎
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CROP Research Institute of Shandong Academy of Agricultural Sciences
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Abstract

The invention discloses a method for improving the hardness of wheat grains. The invention discloses a method for improving the hardness of wheat grains, which comprises the following steps: A1) editing a target DNA fragment in a receptor wheat genome by using a gene editing method to obtain a gene-edited wheat with the target DNA fragment changed; the sequence of the target DNA fragment is sequence 5 in the sequence table; A2) the target wheat with grain hardness increased compared with receptor wheat is obtained by screening from the gene editing wheat. The method for cultivating wheat with improved wheat grain hardness and the used reagent set provide powerful tools for improving wheat processing quality, and have wide application prospects.

Description

Method for improving hardness of wheat grains
Technical Field
The invention relates to the field of biotechnology, and discloses a method for improving the hardness of wheat grains.
Background
The hardness of wheat grains refers to the amount of force required to grind the wheat grains. According to the hardness of grains, common wheat is internationally divided into hard wheat and soft wheat. The hard wheat grains have high hardness, high protein content, high gluten strength, relatively thick flour particles and high water absorption rate, and are suitable for baking bread; the soft wheat has soft endosperm, low protein content, weak gluten, fine flour particles and low water absorption, and is suitable for making various foods such as biscuits, cakes and the like. The semi-hard wheat between the two has the same protein content and gluten strength, can be used for making soft and hard bread with short fermentation time and various types of thin pancakes, and is also suitable for making food such as Chinese steamed bread, noodles and the like. Grain hardness is a main index of international wheat market classification, and the Chinese (GB1351-1999) distinguishes soft from hard by cutin rate, wherein the cutin rate is not less than 70% of hard, and the flour rate is not less than 70% of soft. However, cutin rate and hardness are two different concepts, and wheat hardness in China is a mixed population and is not matched with the quantity and quality of protein. Although the protein content and quality of part of high-quality wheat varieties widely popularized in China are close to the standard of high-quality bread wheat, the grain hardness is soft, the water absorption of flour is low, and the commercial value of the flour is seriously influenced, so that the genetic improvement of hardness becomes one of the main targets of wheat quality improvement in China.
Disclosure of Invention
The invention aims to solve the technical problem of how to improve the hardness of wheat grains.
In order to solve the technical problems, the invention firstly provides a method for cultivating wheat with improved wheat grain hardness, which comprises A1) and A2):
A1) editing a target DNA fragment in a receptor wheat genome by using a gene editing method to obtain a gene-edited wheat with the target DNA fragment changed; the sequence of the target DNA fragment is sequence 5 in the sequence table;
A2) and screening the target wheat with grain hardness increased compared with the receptor wheat from the gene editing wheat.
The invention also provides a method for improving the hardness of wheat grains, which comprises A1) and A2):
A1) editing a target DNA fragment in a receptor wheat genome by using a gene editing method to obtain a gene-edited wheat with the target DNA fragment changed; the sequence of the target DNA fragment is sequence 5 in the sequence table;
A2) and screening the target wheat with grain hardness increased compared with the receptor wheat from the gene editing wheat to realize the improvement of the grain hardness of the wheat.
Above, the gene editing method can be performed using the CRISPR/Cas9 system.
The target sequence of sgRNA in the CRISPR/Cas9 system can be sequence 1 in the sequence table.
The sequence of the sgRNA can be a sequence 2 in a sequence table.
Compared with the acceptor wheat, the target DNA fragment of the target wheat can lack 94 th to 127 th positions of a sequence 5 in a sequence table.
Editing the target DNA fragment in the genome of the receptor wheat by using a CRISPR/Cas9 system can be realized by introducing an expression cassette (marked as a sgRNA expression cassette) containing a coding gene of the sgRNA and an expression cassette (marked as a Cas9 expression cassette) containing a coding gene of a Cas9 protein into the receptor wheat.
The sgRNA expression cassette refers to a DNA capable of transcribing the sgRNA in a host cell, and the DNA may include not only a promoter that initiates transcription of the sgRNA-encoding gene but also a terminator that terminates transcription of the sgRNA-encoding gene. Further, the expression cassette may also include an enhancer sequence. In the sgRNA expression cassette, transcription of a gene encoding the sgRNA can be driven by a wheat U3 promoter TaU 3.
The Cas9 expression cassette refers to DNA capable of expressing Cas9 protein in a host cell, which may include not only a promoter for initiating transcription of the Cas9 protein-encoding gene, but also a terminator for terminating transcription of the Cas9 protein-encoding gene. Further, the expression cassette may also include an enhancer sequence. In the Cas9 expression cassette, the expression of the encoding gene of Cas9 can be specifically driven by the maize ubiqutin promoter.
The invention also provides the following products I or II:
I. the sgRNA;
II. A biomaterial associated with the sgRNA, any of the following B1) to B9):
B1) a nucleic acid molecule encoding the sgRNA;
B2) an expression cassette comprising the nucleic acid molecule of B1);
B3) a recombinant vector containing the nucleic acid molecule of B1) or a recombinant vector containing the expression cassette of B2);
B4) a recombinant microorganism containing B1) the nucleic acid molecule, or a recombinant microorganism containing B2) the expression cassette, or a recombinant microorganism containing B3) the recombinant vector;
B5) a transgenic plant cell line comprising B1) the nucleic acid molecule or a transgenic plant cell line comprising B2) the expression cassette;
B6) transgenic plant tissue comprising the nucleic acid molecule of B1) or transgenic plant tissue comprising the expression cassette of B2);
B7) a transgenic plant organ containing B1) the nucleic acid molecule or a transgenic plant organ containing B2) the expression cassette.
In the product, the nucleic acid molecule B1) can be a DNA molecule shown in a sequence obtained by replacing all U in a sequence 2 in a sequence table with T.
B2) The expression cassette can be the sgRNA expression cassette. The sequence of the sgRNA expression cassette can be sequence 6.
The invention also provides a kit of reagents, which kit is III or IV:
III, a kit consisting of the product and a Cas9 protein;
IV, a kit consisting of the product and a biological material associated with Cas9 protein; the biomaterial is any one of the following C1) to C9):
C1) a nucleic acid molecule encoding a Cas9 protein;
C2) an expression cassette comprising the nucleic acid molecule of C1);
C3) a recombinant vector comprising the nucleic acid molecule of C1), or a recombinant vector comprising the expression cassette of C2);
C4) a recombinant microorganism containing C1) the nucleic acid molecule, or a recombinant microorganism containing C2) the expression cassette, or a recombinant microorganism containing C3) the recombinant vector;
C5) a transgenic plant cell line comprising C1) the nucleic acid molecule or a transgenic plant cell line comprising C2) the expression cassette;
C6) transgenic plant tissue comprising the nucleic acid molecule of B1), or transgenic plant tissue comprising the expression cassette of C2);
C7) a transgenic plant organ containing B1) the nucleic acid molecule or a transgenic plant organ containing C2) the expression cassette.
In the kit, the Cas9 protein can be a protein encoded by the DNA fragment shown in the 4530-8630 site of the sequence 3 in the sequence table.
C1) The nucleic acid molecule can be a DNA molecule shown in the 4530-8630 site of the sequence 3 in the sequence table.
C2) The expression cassette may be the Cas9 expression cassette. The sequence of the Cas9 expression cassette can be 2403-9201 of sequence 3.
Existing expression vectors can be used to construct recombinant vectors containing the sgRNA expression cassette and/or the Cas9 expression cassette.
As above, the vector may be a plasmid, cosmid, phage or viral vector. The vector may specifically be a pBUE411 vector.
The recombinant vector can be pBUE411-Cas 9-gR. The pBUE411-Cas9-gR is a recombinant vector obtained by inserting a DNA fragment shown in a sequence 1 in a sequence table between BsaI recognition sequences of a pBUE411 vector by using BsaI, and a T-DNA region of the pBUE411-Cas9-gR contains a Cas9 expression cassette and a sgRNA expression cassette, can express Cas9 and can transcribe the sgRNA shown in a sequence 2 in the sequence table.
The microorganism may be a yeast, bacterium, algae or fungus. Wherein the bacteria can be Agrobacterium.
The transgenic plant cell line, the transgenic plant tissue and the transgenic plant organ do not comprise propagation material.
The invention also provides any of the following applications:
x1) use of the product or the kit for increasing the hardness of wheat grain;
x2) the use of the product or the kit for the preparation of a product for increasing the hardness of wheat grain;
x3) the use of the product or the kit for breeding wheat with increased grain hardness;
x4) the use of the product or the kit for the preparation of a product for breeding wheat with increased grain hardness;
x5) use of the product or the kit in wheat breeding;
x6) the method for improving wheat grain hardness by cultivating wheat or the application of the method for improving wheat grain hardness in wheat breeding.
The method for cultivating wheat with improved wheat grain hardness and the kit used in the method provide a powerful tool for improving wheat processing quality, and have wide application prospects.
Drawings
FIG. 1 is the identification of transgenic lines. Samples 1-10 are T0 generation transgenic lines, 11 is a positive control, 12 is a negative control, wherein two bands appear in samples 1,3,4, 5, 6,7,8 and 10, the result is consistent with the result of the positive control 11, and the samples are positive transgenic lines; 2 and 9, a band appears, which is consistent with a negative control and is a negative transgenic line.
Detailed Description
The present invention is described in further detail below with reference to specific embodiments, which are given for the purpose of illustration only and are not intended to limit the scope of the invention. The experimental procedures in the following examples are conventional unless otherwise specified. Materials, reagents, instruments and the like used in the following examples are commercially available unless otherwise specified. The quantitative tests in the following examples, all set up three replicates and the results averaged. In the following examples, unless otherwise specified, the 1 st position of each nucleotide sequence in the sequence listing is the 5 'terminal nucleotide of the corresponding DNA/RNA, and the last position is the 3' terminal nucleotide of the corresponding DNA/RNA.
High-fidelity enzyme required by PCR amplification, T4 ligase required by DNA fragment connection, gel recovery kit required by enzyme digestion fragment recovery and plasmid extraction kit are all products of Dalibao biological company. The plasmid extraction kit is a biological product of Tiangen, the inorganic salt required by the preparation of the culture medium is a product of a national medicine group, and the vitamins, antibiotics and hormones are products of Sigma company.
Reagents such as T4 ligase, DNA Marker DL2000 and the like are products of Takara company; fastpfu, 2 × Taq Mix, DH5 α and the like are products of Beijing Quanzijin company; restriction enzyme BsaI-HF is a product of NEB.
The wheat variety K35 (early-maturing wheat new germplasm K35 cultured by the easily-flowering medicine; Suisuxia, Huangyan, Chuxisheng, Li-gen, Qiqing, Shandong agricultural science, No. 1-116-plus-117 in 2007) is a new germplasm with good tissue culture capability which is self-bred by crops in the Shandong province academy of farming, the public can obtain the biological material from the applicant, and the biological material is only used for repeating the related experiments of the invention and cannot be used for other purposes.
The pBUE411 vector is represented by a sequence 3 (17431bp) in the sequence table, is provided by Susan Youth task group of Chinese agricultural university, and can be obtained by the public from the institute of crop science of Chinese agricultural academy after the Susan Youth task group of Chinese agricultural university agrees. The pBUE411 vector contains the wheat U3 promoter TaU3 to start sgRNA.
Experimental example 1 preparation of wheat Material with grain hardness increased
First, construction of expression vector
A DNA fragment shown as a sequence 1 in a sequence table is used as a target sequence of sgRNA to prepare a recombinant vector used by a CRISPR/Cas9 system, and the steps are as follows:
1. synthesizing single-stranded DNA: single-stranded DNAs with the names of gR1-TaU3-F and gR1-TaU3-R were synthesized, and the sequences of gR1-TaU3-F and gR1-TaU3-R were as follows:
gR1-TaU3-F:5′-GGCGACTTAGCTTCGGCCGCTCCTG-3′;
gR1-TaU3-R:5′-AAACCAGGAGCGGCCGAAGCTAAGT-3′。
where the underlined positions match the sequence in the pBUE411 vector.
2. Preparation of double-stranded DNA: gR1-TaU3-F and gR1-TaU3-R are respectively phosphorylated and then annealed in the same system to form double-stranded DNA.
3. Linearization of the pBUE411 vector: the pBUE411 vector was digested with BsaI to obtain a linear vector fragment.
4. Preparation of recombinant vector: and (3) connecting the double-stranded DNA obtained in the step (2) with the linear vector fragment obtained in the step (3) to obtain a recombinant vector, marking the recombinant vector as pBUE411-Cas9-gR, inserting the DNA fragment shown in the sequence 1 in the sequence table between BsaI recognition sequences of the pBUE411 vector by using BsaI to obtain the pBUE411-Cas9-gR, wherein a T-DNA region of the recombinant vector contains a bar expression cassette, a Cas9 expression cassette and a sgRNA expression cassette, and can express bar and Cas9 and can transcribe the sgRNA shown in the sequence 2 in the sequence table. The sequence of the Cas9 expression cassette is 2403-9201 th site of the sequence 3 in the sequence table, the 4530-8630 th site of the sequence 3 is a Cas9 coding gene sequence, the upstream of the Cas9 coding gene sequence contains a maize ubiqutin promoter, and the expression of the Cas9 is driven by the maize ubiqutin promoter; the sequence of the sgRNA expression cassette is sequence 6 in the sequence table, the upstream of the coding gene (1750-1846 site of sequence 6) of the sgRNA shown in sequence 2 contains a wheat U3 promoter TaU3, and the transcription of the sgRNA is driven by a wheat U3 promoter TaU 3; the bar expression cassette contains the gene coding for bar.
II, activity of pBUE411-Cas9-gR in transcribing sgRNA
Protoplast was used to detect the sgRNA transcription activity of pBUE411-Cas9-gR, as follows:
1. protoplast transformation: reference wheat protoplast preparation and transformation and appropriate adjustment. Growing wheat K35 seed at 25 deg.C for 7-10 days, preparing protoplast from 15-20 fresh leaves, and culturing with MMG solution (0.4Mmannitol,15mM MgCl)2,4mM MES, balance water) to obtain a protoplast suspension. Transforming the recombinant vector pBUE411-Cas9-gR obtained in the step one into a protoplast by a PEG mediated method, finally, culturing the protoplast containing the pBUE411-Cas9-gR for 2-3 days at 25 ℃ in the dark or in the weak light, centrifuging, collecting the wheat protoplast, and extracting the genome DNA of the wheat protoplast.
2. Gene editing result detection
The target DNA fragment is amplified using specific primers. Forward and reverse Barcode were added to the 5' end of the PCR primers, respectively, for library construction (primers PF and PR in table 1, underlined Barcode). Regions corresponding to the upstream and downstream regions of the target sequence were amplified by primers with corresponding barcodes. After amplification, equal amounts of PCR products were mixed and a 2X150bp paired-end library was constructed according to the literature (German MA, Luo S, Schroth G, Meyers BC, Green PJ: Construction of Parallel Analysis of RNA Ends (PARE) libraries for the study of the captured miRNA targets and the RNA degradome [ J ]. Nat Protoc 2009,4(3):356-362.) for Illumina sequencing by Novista, and the resulting sequenced sequences were aligned to wheat genomic sequences. Sequence changes (including substitutions, insertions and deletions) that occur at the DNA segment of interest are considered mutations.
TABLE 1 primer sequences
Transforming the wheat protoplast by a PEG method, extracting the wheat genome DNA from the wheat protoplast which is incubated for 2-3 days after transformation by using a plant genome DNA extraction kit, amplifying a target DNA fragment, and then establishing a library for sequencing. Sequencing results showed that the editing types of the target DNA fragments were mainly single nucleotide mutations (SNPs) and indels (insertions/deletions). Among them, the target DNA fragment had a mutation efficiency of 3.86%, including 3.83% of SNPs (21982 single nucleotide mutations) and 0.03% of insertions/deletions (178 indels). The mutation site detection of the target DNA fragment discovers the substitution and deletion of nucleotides at the editing site (the 4 th site before the PAM sequence), including the substitution and deletion of mononucleotide and the like. In addition, mutations were also detected at other sites before PAM.
Identification of common wheat and positive transgenic wheat transformed by pBUE411-Cas9-gR
And (3) after the pBUE411-Cas9-gR obtained in the step one is introduced into agrobacterium EHA105, transforming a wheat variety K35 by using an agrobacterium-mediated wheat genetic transformation method to obtain a T0 generation transgenic strain.
The nontransgenic wheat variety K35 is used as a negative control, and a bar gene detection kit Quickstix of Meitson scientific and technical Co Ltd is utilizedTMAnd (3) detecting the T0 generation transgenic lines, screening to obtain positive transgenic lines, wherein partial detection results are shown in figure 1, and samples 1,3,4, 5, 6,7,8 and 10 in figure 1 are all positive transgenic lines.
Fourth, detection of target DNA fragment mutation condition
Whether the target DNA fragment is successfully edited needs sequencing for identification, and the invention adopts a Hi-TOM gene editing site detection kit produced by Tianjinnuo grass genesis company to detect whether the target DNA fragment of the positive transgenic plant strain obtained by screening in the step three is mutated. The kit completes the high-throughput library building process by a PCR method, and then directly analyzes the variation information of multiple samples and multiple sites by Hi-TOM online software. And (3) amplifying the A by using specific primers on both sides of the target sequence, and sending an amplification product to a Nordheim source for sequencing after a library is built.
A strain with mutation of a target DNA fragment is detected by using a Hi-TOM gene editing site detection kit, and the number of the strain is No. 47 wheat. The sequence of the target DNA fragment of No. 47 wheat is sequence 4 in the sequence table, and the sequence of the target DNA fragment of wheat variety K35 is sequence 5 in the sequence table. Compared with wheat variety K35, wheat No. 47 has 34 nucleotides missing in the target DNA fragment.
And performing PCR amplification and sequencing on the genome DNA of the No. 47 wheat by using the primer pair A, and verifying the mutation condition of the No. 47 wheat at the target DNA fragment by using the wheat variety K35 as a control. The sequences of primer pair a are as follows: 5'-TGTAGCGAGCACAACCTT-3', 5'-GTGGTGCTATCTGGCTCA-3' are provided.
Hardness analysis of No. five and 47 wheat grains
And (3) breeding No. 47 wheat to T2 generation, collecting seeds of a strain 47-1-3 with homozygous mutation of a target DNA fragment, placing the seeds and the seeds of the wheat variety K35 harvested at the same time under the same condition for 3 days, and controlling the water content to be 11-13%. Hardness values were determined for 300 wheat samples of 47-1-3 and wheat variety K35, respectively, using a Perten model 4100 Single grain hardness tester (SKCS). Results show that the average grain hardness of 47-1-3 is 62, while the average grain hardness of the wheat variety K35 is 45, compared with the wheat variety K35, the grain hardness of 47-1-3 is obviously improved by 37.8%, and the wheat with high grain hardness is successfully obtained.
<110> institute of agricultural sciences of Shandong province
<120> method for improving hardness of wheat grains
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ggcgatgagc gaaatgtagt gcttacgttg tcccgcattt ggtacagcgc agtaaccggc 1680
aaaatcgcgc cgaaggatgt cgctgccgac tgggcaatgg agcgcctgcc ggcccagtat 1740
cagcccgtca tacttgaagc tagacaggct tatcttggac aagaagaaga tcgcttggcc 1800
tcgcgcgcag atcagttgga agaatttgtc cactacgtga aaggcgagat caccaaggta 1860
gtcggcaaat aatgtctagc tagaaattcg ttcaagccga cgccgcttcg cggcgcggct 1920
taactcaagc gttagatgca ctaagcacat aattgctcac agccaaacta tcaggtcaag 1980
tctgctttta ttatttttaa gcgtgcataa taagccggtc tcggttttag agctagaaat 2040
agcaagttaa aataaggcta gtccgttatc aacttgaaaa agtggcaccg agtcggtgct 2100
tttttttttc gttttgcatt gagttttctc cgtcgcatgt ttgcagtttt attttccgtt 2160
ttgcattgaa atttctccgt ctcatgtttg cagcgtgttc aaaaagtacg cagctgtatt 2220
tcacttattt acggcgccac attttcatgc cgtttgtgcc aactatcccg agctagtgaa 2280
tacagcttgg cttcacacaa cactggtgac ccgctgacct gctcgtacct cgtaccgtcg 2340
tacggcacag catttggaat taaagggtgt gatcgatact gcttgctgct aagcttgcat 2400
gcctgcagtg cagcgtgacc cggtcgtgcc cctctctaga gataatgagc attgcatgtc 2460
taagttataa aaaattacca catatttttt ttgtcacact tgtttgaagt gcagtttatc 2520
tatctttata catatattta aactttactc tacgaataat ataatctata gtactacaat 2580
aatatcagtg ttttagagaa tcatataaat gaacagttag acatggtcta aaggacaatt 2640
gagtattttg acaacaggac tctacagttt tatcttttta gtgtgcatgt gttctccttt 2700
ttttttgcaa atagcttcac ctatataata cttcatccat tttattagta catccattta 2760
gggtttaggg ttaatggttt ttatagacta atttttttag tacatctatt ttattctatt 2820
ttagcctcta aattaagaaa actaaaactc tattttagtt tttttattta ataatttaga 2880
tataaaatag aataaaataa agtgactaaa aattaaacaa atacccttta agaaattaaa 2940
aaaactaagg aaacattttt cttgtttcga gtagataatg ccagcctgtt aaacgccgtc 3000
gacgagtcta acggacacca accagcgaac cagcagcgtc gcgtcgggcc aagcgaagca 3060
gacggcacgg catctctgtc gctgcctctg gacccctctc gagagttccg ctccaccgtt 3120
ggacttgctc cgctgtcggc atccagaaat tgcgtggcgg agcggcagac gtgagccggc 3180
acggcaggcg gcctcctcct cctctcacgg cacggcagct acgggggatt cctttcccac 3240
cgctccttcg ctttcccttc ctcgcccgcc gtaataaata gacaccccct ccacaccctc 3300
tttccccaac ctcgtgttgt tcggagcgca cacacacaca accagatctc ccccaaatcc 3360
acccgtcggc acctccgctt caaggtacgc cgctcgtcct cccccccccc ccctctctac 3420
cttctctaga tcggcgttcc ggtccatggt tagggcccgg tagttctact tctgttcatg 3480
tttgtgttag atccgtgttt gtgttagatc cgtgctgcta gcgttcgtac acggatgcga 3540
cctgtacgtc agacacgttc tgattgctaa cttgccagtg tttctctttg gggaatcctg 3600
ggatggctct agccgttccg cagacgggat cgatttcatg attttttttg tttcgttgca 3660
tagggtttgg tttgcccttt tcctttattt caatatatgc cgtgcacttg tttgtcgggt 3720
catcttttca tgcttttttt tgtcttggtt gtgatgatgt ggtctggttg ggcggtcgtt 3780
ctagatcgga gtagaattct gtttcaaact acctggtgga tttattaatt ttggatctgt 3840
atgtgtgtgc catacatatt catagttacg aattgaagat gatggatgga aatatcgatc 3900
taggataggt atacatgttg atgcgggttt tactgatgca tatacagaga tgctttttgt 3960
tcgcttggtt gtgatgatgt ggtgtggttg ggcggtcgtt cattcgttct agatcggagt 4020
agaatactgt ttcaaactac ctggtgtatt tattaatttt ggaactgtat gtgtgtgtca 4080
tacatcttca tagttacgag tttaagatgg atggaaatat cgatctagga taggtataca 4140
tgttgatgtg ggttttactg atgcatatac atgatggcat atgcagcatc tattcatatg 4200
ctctaacctt gagtacctat ctattataat aaacaagtat gttttataat tattttgatc 4260
ttgatatact tggatgatgg catatgcagc agctatatgt ggattttttt agccctgcct 4320
tcatacgcta tttatttgct tggtactgtt tcttttgtcg atgctcaccc tgttgtttgg 4380
tgttacttct gcagccctag gcctactaga tggattacaa ggaccacgac ggggattaca 4440
aggaccacga cattgattac aaggatgatg atgacaagat ggctccgaag aagaagagga 4500
aggttggcat ccacggggtg ccagctgctg acaagaagta ctcgatcggc ctcgatattg 4560
ggactaactc tgttggctgg gccgtgatca ccgacgagta caaggtgccc tcaaagaagt 4620
tcaaggtcct gggcaacacc gatcggcatt ccatcaagaa gaatctcatt ggcgctctcc 4680
tgttcgacag cggcgagacg gctgaggcta cgcggctcaa gcgcaccgcc cgcaggcggt 4740
acacgcgcag gaagaatcgc atctgctacc tgcaggagat tttctccaac gagatggcga 4800
aggttgacga ttctttcttc cacaggctgg aggagtcatt cctcgtggag gaggataaga 4860
agcacgagcg gcatccaatc ttcggcaaca ttgtcgacga ggttgcctac cacgagaagt 4920
accctacgat ctaccatctg cggaagaagc tcgtggactc cacagataag gcggacctcc 4980
gcctgatcta cctcgctctg gcccacatga ttaagttcag gggccatttc ctgatcgagg 5040
gggatctcaa cccggacaat agcgatgttg acaagctgtt catccagctc gtgcagacgt 5100
acaaccagct cttcgaggag aaccccatta atgcgtcagg cgtcgacgcg aaggctatcc 5160
tgtccgctag gctctcgaag tctcggcgcc tcgagaacct gatcgcccag ctgccgggcg 5220
agaagaagaa cggcctgttc gggaatctca ttgcgctcag cctggggctc acgcccaact 5280
tcaagtcgaa tttcgatctc gctgaggacg ccaagctgca gctctccaag gacacatacg 5340
acgatgacct ggataacctc ctggcccaga tcggcgatca gtacgcggac ctgttcctcg 5400
ctgccaagaa tctgtcggac gccatcctcc tgtctgatat tctcagggtg aacaccgaga 5460
ttacgaaggc tccgctctca gcctccatga tcaagcgcta cgacgagcac catcaggatc 5520
tgaccctcct gaaggcgctg gtcaggcagc agctccccga gaagtacaag gagatcttct 5580
tcgatcagtc gaagaacggc tacgctgggt acattgacgg cggggcctct caggaggagt 5640
tctacaagtt catcaagccg attctggaga agatggacgg cacggaggag ctgctggtga 5700
agctcaatcg cgaggacctc ctgaggaagc agcggacatt cgataacggc agcatcccac 5760
accagattca tctcggggag ctgcacgcta tcctgaggag gcaggaggac ttctaccctt 5820
tcctcaagga taaccgcgag aagatcgaga agattctgac tttcaggatc ccgtactacg 5880
tcggcccact cgctaggggc aactcccgct tcgcttggat gacccgcaag tcagaggaga 5940
cgatcacgcc gtggaacttc gaggaggtgg tcgacaaggg cgctagcgct cagtcgttca 6000
tcgagaggat gacgaatttc gacaagaacc tgccaaatga gaaggtgctc cctaagcact 6060
cgctcctgta cgagtacttc acagtctaca acgagctgac taaggtgaag tatgtgaccg 6120
agggcatgag gaagccggct ttcctgtctg gggagcagaa gaaggccatc gtggacctcc 6180
tgttcaagac caaccggaag gtcacggtta agcagctcaa ggaggactac ttcaagaaga 6240
ttgagtgctt cgattcggtc gagatctctg gcgttgagga ccgcttcaac gcctccctgg 6300
ggacctacca cgatctcctg aagatcatta aggataagga cttcctggac aacgaggaga 6360
atgaggatat cctcgaggac attgtgctga cactcactct gttcgaggac cgggagatga 6420
tcgaggagcg cctgaagact tacgcccatc tcttcgatga caaggtcatg aagcagctca 6480
agaggaggag gtacaccggc tgggggaggc tgagcaggaa gctcatcaac ggcattcggg 6540
acaagcagtc cgggaagacg atcctcgact tcctgaagag cgatggcttc gcgaaccgca 6600
atttcatgca gctgattcac gatgacagcc tcacattcaa ggaggatatc cagaaggctc 6660
aggtgagcgg ccagggggac tcgctgcacg agcatatcgc gaacctcgct ggctcgccag 6720
ctatcaagaa ggggattctg cagaccgtga aggttgtgga cgagctggtg aaggtcatgg 6780
gcaggcacaa gcctgagaac atcgtcattg agatggcccg ggagaatcag accacgcaga 6840
agggccagaa gaactcacgc gagaggatga agaggatcga ggagggcatt aaggagctgg 6900
ggtcccagat cctcaaggag cacccggtgg agaacacgca gctgcagaat gagaagctct 6960
acctgtacta cctccagaat ggccgcgata tgtatgtgga ccaggagctg gatattaaca 7020
ggctcagcga ttacgacgtc gatcatatcg ttccacagtc attcctgaag gatgactcca 7080
ttgacaacaa ggtcctcacc aggtcggaca agaaccgggg caagtctgat aatgttcctt 7140
cagaggaggt cgttaagaag atgaagaact actggcgcca gctcctgaat gccaagctga 7200
tcacgcagcg gaagttcgat aacctcacaa aggctgagag gggcgggctc tctgagctgg 7260
acaaggcggg cttcatcaag aggcagctgg tcgagacacg gcagatcact aagcacgttg 7320
cgcagattct cgactcacgg atgaacacta agtacgatga gaatgacaag ctgatccgcg 7380
aggtgaaggt catcaccctg aagtcaaagc tcgtctccga cttcaggaag gatttccagt 7440
tctacaaggt tcgggagatc aacaattacc accatgccca tgacgcgtac ctgaacgcgg 7500
tggtcggcac agctctgatc aagaagtacc caaagctcga gagcgagttc gtgtacgggg 7560
actacaaggt ttacgatgtg aggaagatga tcgccaagtc ggagcaggag attggcaagg 7620
ctaccgccaa gtacttcttc tactctaaca ttatgaattt cttcaagaca gagatcactc 7680
tggccaatgg cgagatccgg aagcgccccc tcatcgagac gaacggcgag acgggggaga 7740
tcgtgtggga caagggcagg gatttcgcga ccgtcaggaa ggttctctcc atgccacaag 7800
tgaatatcgt caagaagaca gaggtccaga ctggcgggtt ctctaaggag tcaattctgc 7860
ctaagcggaa cagcgacaag ctcatcgccc gcaagaagga ctgggatccg aagaagtacg 7920
gcgggttcga cagccccact gtggcctact cggtcctggt tgtggcgaag gttgagaagg 7980
gcaagtccaa gaagctcaag agcgtgaagg agctgctggg gatcacgatt atggagcgct 8040
ccagcttcga gaagaacccg atcgatttcc tggaggcgaa gggctacaag gaggtgaaga 8100
aggacctgat cattaagctc cccaagtact cactcttcga gctggagaac ggcaggaagc 8160
ggatgctggc ttccgctggc gagctgcaga aggggaacga gctggctctg ccgtccaagt 8220
atgtgaactt cctctacctg gcctcccact acgagaagct caagggcagc cccgaggaca 8280
acgagcagaa gcagctgttc gtcgagcagc acaagcatta cctcgacgag atcattgagc 8340
agatttccga gttctccaag cgcgtgatcc tggccgacgc gaatctggat aaggtcctct 8400
ccgcgtacaa caagcaccgc gacaagccaa tcagggagca ggctgagaat atcattcatc 8460
tcttcaccct gacgaacctc ggcgcccctg ctgctttcaa gtacttcgac acaactatcg 8520
atcgcaagag gtacacaagc actaaggagg tcctggacgc gaccctcatc caccagtcga 8580
ttaccggcct ctacgagacg cgcatcgacc tgtctcagct cgggggcgac aagcggccag 8640
cggcgacgaa gaaggcgggg caggcgaaga agaagaagtg agctcagagc tttcgttcgt 8700
atcatcggtt tcgacaacgt tcgtcaagtt caatgcatca gtttcattgc gcacacacca 8760
gaatcctact gagtttgagt attatggcat tgggaaaact gtttttcttg taccatttgt 8820
tgtgcttgta atttactgtg ttttttattc ggttttcgct atcgaactgt gaaatggaaa 8880
tggatggaga agagttaatg aatgatatgg tccttttgtt cattctcaaa ttaatattat 8940
ttgttttttc tcttatttgt tgtgtgttga atttgaaatt ataagagata tgcaaacatt 9000
ttgttttgag taaaaatgtg tcaaatcgtg gcctctaatg accgaagtta atatgaggag 9060
taaaacactt gtagttgtac cattatgctt attcactagg caacaaatat attttcagac 9120
ctagaaaagc tgcaaatgtt actgaataca agtatgtcct cttgtgtttt agacatttat 9180
gaactttcct ttatgtaatt ttccagaatc cttgtcagat tctaatcatt gctttataat 9240
tatagttata ctcatggatt tgtagttgag tatgaaaata ttttttaatg cattttatga 9300
cttgccaatt gattgacaac gaattcgtaa tcatggtcat agctgtttcc tgtgtgaaat 9360
tgttatccgc tcacaattcc acacaacata cgagccggaa gcataaagtg taaagcctgg 9420
ggtgcctaat gagtgagcta actcacatta attgcgttgc gctcactgcc cgctttccag 9480
tcgggaaacc tgtcgtgcca gctgcattaa tgaatcggcc aacgcgcggg gagaggcggt 9540
ttgcgtattg gctagagcag cttgccaaca tggtggagca cgacactctc gtctactcca 9600
agaatatcaa agatacagtc tcagaagacc aaagggctat tgagactttt caacaaaggg 9660
taatatcggg aaacctcctc ggattccatt gcccagctat ctgtcacttc atcaaaagga 9720
cagtagaaaa ggaaggtggc acctacaaat gccatcattg cgataaagga aaggctatcg 9780
ttcaagatgc ctctgccgac agtggtccca aagatggacc cccacccacg aggagcatcg 9840
tggaaaaaga agacgttcca accacgtctt caaagcaagt ggattgatgt gataacatgg 9900
tggagcacga cactctcgtc tactccaaga atatcaaaga tacagtctca gaagaccaaa 9960
gggctattga gacttttcaa caaagggtaa tatcgggaaa cctcctcgga ttccattgcc 10020
cagctatctg tcacttcatc aaaaggacag tagaaaagga aggtggcacc tacaaatgcc 10080
atcattgcga taaaggaaag gctatcgttc aagatgcctc tgccgacagt ggtcccaaag 10140
atggaccccc acccacgagg agcatcgtgg aaaaagaaga cgttccaacc acgtcttcaa 10200
agcaagtgga ttgatgtgat atctccactg acgtaaggga tgacgcacaa tcccactatc 10260
cttcgcaaga ccttcctcta tataaggaag ttcatttcat ttggagagga cacgctgaaa 10320
tcaccagtct ctctctacaa atctatctct ctcgagtcta ccatgagccc agaacgacgc 10380
ccggccgaca tccgccgtgc caccgaggcg gacatgccgg cggtctgcac catcgtcaac 10440
cactacatcg agacaagcac ggtcaacttc cgtaccgagc cgcaggaacc gcaggagtgg 10500
acggacgacc tcgtccgtct gcgggagcgc tatccctggc tcgtcgccga ggtggacggc 10560
gaggtcgccg gcatcgccta cgcgggcccc tggaaggcac gcaacgccta cgactggacg 10620
gccgagtcga ccgtgtacgt ctccccccgc caccagcgga cgggactggg ctccacgctc 10680
tacacccacc tgctgaagtc cctggaggca cagggcttca agagcgtggt cgctgtcatc 10740
gggctgccca acgacccgag cgtgcgcatg cacgaggcgc tcggatatgc cccccgcggc 10800
atgctgcggg cggccggctt caagcacggg aactggcatg acgtgggttt ctggcagctg 10860
gacttcagcc tgccggtacc gccccgtccg gtcctgcccg tcaccgagat ttgactcgag 10920
tttctccata ataatgtgtg agtagttccc agataaggga attagggttc ctatagggtt 10980
tcgctcatgt gttgagcata taagaaaccc ttagtatgta tttgtatttg taaaatactt 11040
ctatcaataa aatttctaat tcctaaaacc aaaatccagt actaaaatcc agatcccccg 11100
aattaattcg gcgttaattc agtacattaa aaacgtccgc aatgtgttat taagttgtct 11160
aagcgtcaat ttgtttacac cacaatatat cctgccacca gccagccaac agctccccga 11220
ccggcagctc ggcacaaaat caccactcga tacaggcagc ccatcagtcc gggacggcgt 11280
cagcgggaga gccgttgtaa ggcggcagac tttgctcatg ttaccgatgc tattcggaag 11340
aacggcaact aagctgccgg gtttgaaaca cggatgatct cgcggagggt agcatgttga 11400
ttgtaacgat gacagagcgt tgctgcctgt gatcaccgcg gtttcaaaat cggctccgtc 11460
gatactatgt tatacgccaa ctttgaaaac aactttgaaa aagctgtttt ctggtattta 11520
aggttttaga atgcaaggaa cagtgaattg gagttcgtct tgttataatt agcttcttgg 11580
ggtatcttta aatactgtag aaaagaggaa ggaaataata aatggctaaa atgagaatat 11640
caccggaatt gaaaaaactg atcgaaaaat accgctgcgt aaaagatacg gaaggaatgt 11700
ctcctgctaa ggtatataag ctggtgggag aaaatgaaaa cctatattta aaaatgacgg 11760
acagccggta taaagggacc acctatgatg tggaacggga aaaggacatg atgctatggc 11820
tggaaggaaa gctgcctgtt ccaaaggtcc tgcactttga acggcatgat ggctggagca 11880
atctgctcat gagtgaggcc gatggcgtcc tttgctcgga agagtatgaa gatgaacaaa 11940
gccctgaaaa gattatcgag ctgtatgcgg agtgcatcag gctctttcac tccatcgaca 12000
tatcggattg tccctatacg aatagcttag acagccgctt agccgaattg gattacttac 12060
tgaataacga tctggccgat gtggattgcg aaaactggga agaagacact ccatttaaag 12120
atccgcgcga gctgtatgat tttttaaaga cggaaaagcc cgaagaggaa cttgtctttt 12180
cccacggcga cctgggagac agcaacatct ttgtgaaaga tggcaaagta agtggcttta 12240
ttgatcttgg gagaagcggc agggcggaca agtggtatga cattgccttc tgcgtccggt 12300
cgatcaggga ggatatcggg gaagaacagt atgtcgagct attttttgac ttactgggga 12360
tcaagcctga ttgggagaaa ataaaatatt atattttact ggatgaattg ttttagtacc 12420
tagaatgcat gaccaaaatc ccttaacgtg agttttcgtt ccactgagcg tcagaccccg 12480
tagaaaagat caaaggatct tcttgagatc ctttttttct gcgcgtaatc tgctgcttgc 12540
aaacaaaaaa accaccgcta ccagcggtgg tttgtttgcc ggatcaagag ctaccaactc 12600
tttttccgaa ggtaactggc ttcagcagag cgcagatacc aaatactgtc cttctagtgt 12660
agccgtagtt aggccaccac ttcaagaact ctgtagcacc gcctacatac ctcgctctgc 12720
taatcctgtt accagtggct gctgccagtg gcgataagtc gtgtcttacc gggttggact 12780
caagacgata gttaccggat aaggcgcagc ggtcgggctg aacggggggt tcgtgcacac 12840
agcccagctt ggagcgaacg acctacaccg aactgagata cctacagcgt gagctatgag 12900
aaagcgccac gcttcccgaa gggagaaagg cggacaggta tccggtaagc ggcagggtcg 12960
gaacaggaga gcgcacgagg gagcttccag ggggaaacgc ctggtatctt tatagtcctg 13020
tcgggtttcg ccacctctga cttgagcgtc gatttttgtg atgctcgtca ggggggcgga 13080
gcctatggaa aaacgccagc aacgcggcct ttttacggtt cctggccttt tgctggcctt 13140
ttgctcacat gttctttcct gcgttatccc ctgattctgt ggataaccgt attaccgcct 13200
ttgagtgagc tgataccgct cgccgcagcc gaacgaccga gcgcagcgag tcagtgagcg 13260
aggaagcgga agagcgcctg atgcggtatt ttctccttac gcatctgtgc ggtatttcac 13320
accgcatatg gtgcactctc agtacaatct gctctgatgc cgcatagtta agccagtata 13380
cactccgcta tcgctacgtg actgggtcat ggctgcgccc cgacacccgc caacacccgc 13440
tgacgcgccc tgacgggctt gtctgctccc ggcatccgct tacagacaag ctgtgaccgt 13500
ctccgggagc tgcatgtgtc agaggttttc accgtcatca ccgaaacgcg cgaggcaggg 13560
tgccttgatg tgggcgccgg cggtcgagtg gcgacggcgc ggcttgtccg cgccctggta 13620
gattgcctgg ccgtaggcca gccatttttg agcggccagc ggccgcgata ggccgacgcg 13680
aagcggcggg gcgtagggag cgcagcgacc gaagggtagg cgctttttgc agctcttcgg 13740
ctgtgcgctg gccagacagt tatgcacagg ccaggcgggt tttaagagtt ttaataagtt 13800
ttaaagagtt ttaggcggaa aaatcgcctt ttttctcttt tatatcagtc acttacatgt 13860
gtgaccggtt cccaatgtac ggctttgggt tcccaatgta cgggttccgg ttcccaatgt 13920
acggctttgg gttcccaatg tacgtgctat ccacaggaaa cagacctttt cgaccttttt 13980
cccctgctag ggcaatttgc cctagcatct gctccgtaca ttaggaaccg gcggatgctt 14040
cgccctcgat caggttgcgg tagcgcatga ctaggatcgg gccagcctgc cccgcctcct 14100
ccttcaaatc gtactccggc aggtcatttg acccgatcag cttgcgcacg gtgaaacaga 14160
acttcttgaa ctctccggcg ctgccactgc gttcgtagat cgtcttgaac aaccatctgg 14220
cttctgcctt gcctgcggcg cggcgtgcca ggcggtagag aaaacggccg atgccgggat 14280
cgatcaaaaa gtaatcgggg tgaaccgtca gcacgtccgg gttcttgcct tctgtgatct 14340
cgcggtacat ccaatcagct agctcgatct cgatgtactc cggccgcccg gtttcgctct 14400
ttacgatctt gtagcggcta atcaaggctt caccctcgga taccgtcacc aggcggccgt 14460
tcttggcctt cttcgtacgc tgcatggcaa cgtgcgtggt gtttaaccga atgcaggttt 14520
ctaccaggtc gtctttctgc tttccgccat cggctcgccg gcagaacttg agtacgtccg 14580
caacgtgtgg acggaacacg cggccgggct tgtctccctt cccttcccgg tatcggttca 14640
tggattcggt tagatgggaa accgccatca gtaccaggtc gtaatcccac acactggcca 14700
tgccggccgg ccctgcggaa acctctacgt gcccgtctgg aagctcgtag cggatcacct 14760
cgccagctcg tcggtcacgc ttcgacagac ggaaaacggc cacgtccatg atgctgcgac 14820
tatcgcgggt gcccacgtca tagagcatcg gaacgaaaaa atctggttgc tcgtcgccct 14880
tgggcggctt cctaatcgac ggcgcaccgg ctgccggcgg ttgccgggat tctttgcgga 14940
ttcgatcagc ggccgcttgc cacgattcac cggggcgtgc ttctgcctcg atgcgttgcc 15000
gctgggcggc ctgcgcggcc ttcaacttct ccaccaggtc atcacccagc gccgcgccga 15060
tttgtaccgg gccggatggt ttgcgaccgc tcacgccgat tcctcgggct tgggggttcc 15120
agtgccattg cagggccggc agacaaccca gccgcttacg cctggccaac cgcccgttcc 15180
tccacacatg gggcattcca cggcgtcggt gcctggttgt tcttgatttt ccatgccgcc 15240
tcctttagcc gctaaaattc atctactcat ttattcattt gctcatttac tctggtagct 15300
gcgcgatgta ttcagatagc agctcggtaa tggtcttgcc ttggcgtacc gcgtacatct 15360
tcagcttggt gtgatcctcc gccggcaact gaaagttgac ccgcttcatg gctggcgtgt 15420
ctgccaggct ggccaacgtt gcagccttgc tgctgcgtgc gctcggacgg ccggcactta 15480
gcgtgtttgt gcttttgctc attttctctt tacctcatta actcaaatga gttttgattt 15540
aatttcagcg gccagcgcct ggacctcgcg ggcagcgtcg ccctcgggtt ctgattcaag 15600
aacggttgtg ccggcggcgg cagtgcctgg gtagctcacg cgctgcgtga tacgggactc 15660
aagaatgggc agctcgtacc cggccagcgc ctcggcaacc tcaccgccga tgcgcgtgcc 15720
tttgatcgcc cgcgacacga caaaggccgc ttgtagcctt ccatccgtga cctcaatgcg 15780
ctgcttaacc agctccacca ggtcggcggt ggcccatatg tcgtaagggc ttggctgcac 15840
cggaatcagc acgaagtcgg ctgccttgat cgcggacaca gccaagtccg ccgcctgggg 15900
cgctccgtcg atcactacga agtcgcgccg gccgatggcc ttcacgtcgc ggtcaatcgt 15960
cgggcggtcg atgccgacaa cggttagcgg ttgatcttcc cgcacggccg cccaatcgcg 16020
ggcactgccc tggggatcgg aatcgactaa cagaacatcg gccccggcga gttgcagggc 16080
gcgggctaga tgggttgcga tggtcgtctt gcctgacccg cctttctggt taagtacagc 16140
gataaccttc atgcgttccc cttgcgtatt tgtttattta ctcatcgcat catatacgca 16200
gcgaccgcat gacgcaagct gttttactca aatacacatc acctttttag acggcggcgc 16260
tcggtttctt cagcggccaa gctggccggc caggccgcca gcttggcatc agacaaaccg 16320
gccaggattt catgcagccg cacggttgag acgtgcgcgg gcggctcgaa cacgtacccg 16380
gccgcgatca tctccgcctc gatctcttcg gtaatgaaaa acggttcgtc ctggccgtcc 16440
tggtgcggtt tcatgcttgt tcctcttggc gttcattctc ggcggccgcc agggcgtcgg 16500
cctcggtcaa tgcgtcctca cggaaggcac cgcgccgcct ggcctcggtg ggcgtcactt 16560
cctcgctgcg ctcaagtgcg cggtacaggg tcgagcgatg cacgccaagc agtgcagccg 16620
cctctttcac ggtgcggcct tcctggtcga tcagctcgcg ggcgtgcgcg atctgtgccg 16680
gggtgagggt agggcggggg ccaaacttca cgcctcgggc cttggcggcc tcgcgcccgc 16740
tccgggtgcg gtcgatgatt agggaacgct cgaactcggc aatgccggcg aacacggtca 16800
acaccatgcg gccggccggc gtggtggtgt cggcccacgg ctctgccagg ctacgcaggc 16860
ccgcgccggc ctcctggatg cgctcggcaa tgtccagtag gtcgcgggtg ctgcgggcca 16920
ggcggtctag cctggtcact gtcacaacgt cgccagggcg taggtggtca agcatcctgg 16980
ccagctccgg gcggtcgcgc ctggtgccgg tgatcttctc ggaaaacagc ttggtgcagc 17040
cggccgcgtg cagttcggcc cgttggttgg tcaagtcctg gtcgtcggtg ctgacgcggg 17100
catagcccag caggccagcg gcggcgctct tgttcatggc gtaatgtctc cggttctagt 17160
cgcaagtatt ctactttatg cgactaaaac acgcgacaag aaaacgccag gaaaagggca 17220
gggcggcagc ctgtcgcgta acttaggact tgtgcgacat gtcgttttca gaagacggct 17280
gcactgaacg tcagaagccg actgcactat agcagcggag gggttggatc aaagtacttt 17340
gatcccgagg ggaaccctgt ggttggcatg cacatacaaa tggacgaacg gataaacctt 17400
ttcacgccct tttaaatatc cgttattcta a 17431
<210> 4
<211> 413
<212> DNA
<213> Artificial sequence
<400> 4
atgaagacct tattcctcct agctctcctt gctcttgtag cgagcacaac cttcgcgcaa 60
tactcagaag ttggcggctg gtacaatgaa gttagcggcc gaagctaagc tcttgcaagg 120
attacgtgat ggagcgatgt ttcacaatga aggattttcc agtcacctgg cccacaaaat 180
ggtggaaggg cggctgtgag catgaggttc gggagaagtg ctgcaagcag ctgagccaga 240
tagcaccaca atgtcgctgt gattctatcc ggcgagtgat ccaaggcagg ctcggtggct 300
tcttgggcat ttggcgaggt gaggtattca aacaacttca gagggcccag agcctcccct 360
caaagtgcaa catgggcgcc gactgcaagt tccctagtgg ctattactgg tga 413
<210> 5
<211> 447
<212> DNA
<213> Artificial sequence
<400> 5
atgaagacct tattcctcct agctctcctt gctcttgtag cgagcacaac cttcgcgcaa 60
tactcagaag ttggcggctg gtacaatgaa gttggcggag gaggtggttc tcaacaatgt 120
ccgcaggagc ggccgaagct aagctcttgc aaggattacg tgatggagcg atgtttcaca 180
atgaaggatt ttccagtcac ctggcccaca aaatggtgga agggcggctg tgagcatgag 240
gttcgggaga agtgctgcaa gcagctgagc cagatagcac cacaatgtcg ctgtgattct 300
atccggcgag tgatccaagg caggctcggt ggcttcttgg gcatttggcg aggtgaggta 360
ttcaaacaac ttcagagggc ccagagcctc ccctcaaagt gcaacatggg cgccgactgc 420
aagttcccta gtggctatta ctggtga 447
<210> 6
<211> 2137
<212> DNA
<213> Artificial sequence
<400> 6
catgaatcca aaccacacgg agttcaaatt cccacagatt aaggctcgtc cgtcgcacaa 60
ggtaatgtgt gaatattata tctgtcgtgc aaaattgcct ggcctgcaca attgctgtta 120
tagttggcgg cagggagagt tttaacattg actagcgtgc tgataatttg tgagaaataa 180
taattgacaa gtagatactg acatttgaga agagcttctg aactgttatt agtaacaaaa 240
atggaaagct gatgcacgga aaaaggaaag aaaaagccat actttttttt aggtaggaaa 300
agaaaaagcc atacgagact gatgtctctc agatgggccg ggatctgtct atctagcagg 360
cagcagccca ccaacctcac gggccagcaa ttacgagtcc ttctaaaagc tcccgccgag 420
gggcgctggc gctgctgtgc agcagcacgt ctaacattag tcccacctcg ccagtttaca 480
gggagcagaa ccagcttata agcggaggcg cggcaccaag aagcggcgtg agaccaaccc 540
agtggacata agcctgttcg gttcgtaagc tgtaatgcaa gtagcgtatg cgctcacgca 600
actggtccag aaccttgacc gaacgcagcg gtggtaacgg cgcagtggcg gttttcatgg 660
cttgttatga ctgttttttt ggggtacagt ctatgcctcg ggcatccaag cagcaagcgc 720
gttacgccgt gggtcgatgt ttgatgttat ggagcagcaa cgatgttacg cagcagggca 780
gtcgccctaa aacaaagtta aacatcatgg gggaagcggt gatcgccgaa gtatcgactc 840
aactatcaga ggtagttggc gtcatcgagc gccatctcga accgacgttg ctggccgtac 900
atttgtacgg ctccgcagtg gatggcggcc tgaagccaca cagtgatatt gatttgctgg 960
ttacggtgac cgtaaggctt gatgaaacaa cgcggcgagc tttgatcaac gaccttttgg 1020
aaacttcggc ttcccctgga gagagcgaga ttctccgcgc tgtagaagtc accattgttg 1080
tgcacgacga catcattccg tggcgttatc cagctaagcg cgaactgcaa tttggagaat 1140
ggcagcgcaa tgacattctt gcaggtatct tcgagccagc cacgatcgac attgatctgg 1200
ctatcttgct gacaaaagca agagaacata gcgttgcctt ggtaggtcca gcggcggagg 1260
aactctttga tccggttcct gaacaggatc tatttgaggc gctaaatgaa accttaacgc 1320
tatggaactc gccgcccgac tgggctggcg atgagcgaaa tgtagtgctt acgttgtccc 1380
gcatttggta cagcgcagta accggcaaaa tcgcgccgaa ggatgtcgct gccgactggg 1440
caatggagcg cctgccggcc cagtatcagc ccgtcatact tgaagctaga caggcttatc 1500
ttggacaaga agaagatcgc ttggcctcgc gcgcagatca gttggaagaa tttgtccact 1560
acgtgaaagg cgagatcacc aaggtagtcg gcaaataatg tctagctaga aattcgttca 1620
agccgacgcc gcttcgcggc gcggcttaac tcaagcgtta gatgcactaa gcacataatt 1680
gctcacagcc aaactatcag gtcaagtctg cttttattat ttttaagcgt gcataataag 1740
ccggtctcga cttagcttcg gccgctcctg gttttagagc tagaaatagc aagttaaaat 1800
aaggctagtc cgttatcaac ttgaaaaagt ggcaccgagt cggtgctttt ttttttcgtt 1860
ttgcattgag ttttctccgt cgcatgtttg cagttttatt ttccgttttg cattgaaatt 1920
tctccgtctc atgtttgcag cgtgttcaaa aagtacgcag ctgtatttca cttatttacg 1980
gcgccacatt ttcatgccgt ttgtgccaac tatcccgagc tagtgaatac agcttggctt 2040
cacacaacac tggtgacccg ctgacctgct cgtacctcgt accgtcgtac ggcacagcat 2100
ttggaattaa agggtgtgat cgatactgct tgctgct 2137

Claims (10)

1. A method for raising wheat with improved wheat grain hardness, which comprises A1) and A2):
A1) editing a target DNA fragment in a receptor wheat genome by using a gene editing method to obtain a gene-edited wheat with the target DNA fragment changed; the sequence of the target DNA fragment is sequence 5 in the sequence table;
A2) and screening the target wheat with grain hardness increased compared with the receptor wheat from the gene editing wheat.
2. A method of increasing the hardness of wheat grain comprising a1) and a 2):
A1) editing a target DNA fragment in a receptor wheat genome by using a gene editing method to obtain a gene-edited wheat with the target DNA fragment changed; the sequence of the target DNA fragment is sequence 5 in the sequence table;
A2) and screening the target wheat with grain hardness increased compared with the receptor wheat from the gene editing wheat to realize the improvement of the grain hardness of the wheat.
3. A method according to claim 1 or 2, characterized in that: the gene editing method is carried out by using a CRISPR/Cas9 system.
4. The method of claim 3, wherein: the target sequence of sgRNA in the CRISPR/Cas9 system is sequence 1 in the sequence table.
5. The method of claim 4, wherein: the sequence of the sgRNA is sequence 2 in the sequence table.
6. The method according to any one of claims 1-5, wherein: compared with the acceptor wheat, the target DNA fragment of the target wheat lacks 94 th to 127 th sites of a sequence 5 in a sequence table.
7. The following products I or II:
I. the sgRNA of claim 4 or 5;
II. The biological material related to the sgRNA of claim 4 or 5, which is any one of the following B1) to B9):
B1) a nucleic acid molecule encoding the sgRNA of claim 4 or 5;
B2) an expression cassette comprising the nucleic acid molecule of B1);
B3) a recombinant vector containing the nucleic acid molecule of B1) or a recombinant vector containing the expression cassette of B2);
B4) a recombinant microorganism containing B1) the nucleic acid molecule, or a recombinant microorganism containing B2) the expression cassette, or a recombinant microorganism containing B3) the recombinant vector;
B5) a transgenic plant cell line comprising B1) the nucleic acid molecule or a transgenic plant cell line comprising B2) the expression cassette;
B6) transgenic plant tissue comprising the nucleic acid molecule of B1) or transgenic plant tissue comprising the expression cassette of B2);
B7) a transgenic plant organ containing B1) the nucleic acid molecule or a transgenic plant organ containing B2) the expression cassette.
8. The product of claim 7, wherein: B1) the nucleic acid molecule is a DNA molecule shown in a sequence obtained by replacing U in a sequence 2 in a sequence table with T.
9. The kit is the following III or IV:
III, a kit consisting of the product of claim 7 or 8 and a Cas9 protein;
IV, a kit of reagents consisting of the product of claim 7 or 8 and a biological material associated with a Cas9 protein; the biomaterial is any one of the following C1) to C9):
C1) a nucleic acid molecule encoding a Cas9 protein;
C2) an expression cassette comprising the nucleic acid molecule of C1);
C3) a recombinant vector comprising the nucleic acid molecule of C1), or a recombinant vector comprising the expression cassette of C2);
C4) a recombinant microorganism containing C1) the nucleic acid molecule, or a recombinant microorganism containing C2) the expression cassette, or a recombinant microorganism containing C3) the recombinant vector;
C5) a transgenic plant cell line comprising C1) the nucleic acid molecule or a transgenic plant cell line comprising C2) the expression cassette;
C6) transgenic plant tissue comprising the nucleic acid molecule of B1), or transgenic plant tissue comprising the expression cassette of C2);
C7) a transgenic plant organ containing B1) the nucleic acid molecule or a transgenic plant organ containing C2) the expression cassette.
10. Any of the following applications:
x1) use of the product of claim 7 or 8 or the kit of claim 9 for increasing the hardness of wheat grain;
x2) use of the product of claim 7 or 8 or the kit of claim 9 for the manufacture of a product for increasing the hardness of wheat grain;
x3) use of the product of claim 7 or 8 or the kit of claim 9 for breeding wheat with increased grain hardness;
x4) use of the product of claim 7 or 8 or the kit of claim 9 for the preparation of a product for growing wheat having increased grain hardness;
x5) the use of a product according to claim 7 or 8 or a kit according to claim 9 in wheat breeding;
x6) use of the method of any one of claims 1 to 6 in wheat breeding.
CN201910953401.1A 2019-10-09 2019-10-09 Method for improving hardness of wheat grains Pending CN110616220A (en)

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