CN109477145B - 炎症性肠病的生物标志物 - Google Patents

炎症性肠病的生物标志物 Download PDF

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CN109477145B
CN109477145B CN201780041664.4A CN201780041664A CN109477145B CN 109477145 B CN109477145 B CN 109477145B CN 201780041664 A CN201780041664 A CN 201780041664A CN 109477145 B CN109477145 B CN 109477145B
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ibd
genes
individual
risk
progression
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CN109477145A (zh
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保罗·A·莱昂斯
约恩·F·麦金尼
达妮埃莱·比亚希
詹姆斯·李
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Cambridge Enterprise Ltd
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    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P1/00Drugs for disorders of the alimentary tract or the digestive system
    • A61P1/04Drugs for disorders of the alimentary tract or the digestive system for ulcers, gastritis or reflux esophagitis, e.g. antacids, inhibitors of acid secretion, mucosal protectants
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
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    • G16B25/00ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G16B25/10Gene or protein expression profiling; Expression-ratio estimation or normalisation
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G16B25/20Polymerase chain reaction [PCR]; Primer or probe design; Probe optimisation
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    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/112Disease subtyping, staging or classification
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    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/158Expression markers
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    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/16Primer sets for multiplex assays

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CN201780041664.4A 2016-07-05 2017-07-05 炎症性肠病的生物标志物 Expired - Fee Related CN109477145B (zh)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
GBGB1611738.4A GB201611738D0 (en) 2016-07-05 2016-07-05 Biomarkers for inflammatory bowel disease
GB1611738.4 2016-07-05
PCT/IB2017/000997 WO2018007872A1 (en) 2016-07-05 2017-07-05 Biomarkers for inflammatory bowel disease

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CN109477145A CN109477145A (zh) 2019-03-15
CN109477145B true CN109477145B (zh) 2021-04-09

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US (3) US11041206B2 (https=)
EP (1) EP3481964B1 (https=)
JP (2) JP7111630B2 (https=)
KR (1) KR102352847B1 (https=)
CN (1) CN109477145B (https=)
AU (1) AU2017293417B2 (https=)
CA (1) CA3029912A1 (https=)
DK (1) DK3481964T3 (https=)
ES (1) ES2906192T3 (https=)
GB (1) GB201611738D0 (https=)
HU (1) HUE058197T2 (https=)
LT (1) LT3481964T (https=)
PL (1) PL3481964T3 (https=)
PT (1) PT3481964T (https=)
WO (1) WO2018007872A1 (https=)

Families Citing this family (14)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US10515408B2 (en) 2003-08-13 2019-12-24 Bgc Partners, Inc. Systems and methods for bid/offer liquidity spread trading
GB201611738D0 (en) 2016-07-05 2016-08-17 Cambridge Entpr Ltd Biomarkers for inflammatory bowel disease
US11978543B2 (en) 2016-12-14 2024-05-07 Astarte Medical Partners Inc. System and methods for developing and using a microbiome-based action component
CA3047302C (en) * 2016-12-14 2024-01-02 Tracy WARREN System and methods for developing and using a microbiome-based action component for patient health
US20210338486A1 (en) 2018-10-18 2021-11-04 T.J.Smith And Nephew,Limited Tissue treatment device
GB201817052D0 (en) 2018-10-19 2018-12-05 Smith & Nephew Tissue treatment device
CN110400603A (zh) * 2019-07-23 2019-11-01 中国石油大学(华东) 基于格局加权的ibd矩阵计算方法
GB201912518D0 (en) 2019-08-30 2019-10-16 Cambridge Entpr Ltd Inflammatory disease prognostics
GB202005867D0 (en) 2020-04-22 2020-06-03 Smith & Nephew Tissue treatment device
GB202100527D0 (en) 2021-01-15 2021-03-03 Smith & Nephew Systems and methods for managing operation of wound dressings or wound treatment devices
IL305808A (en) * 2021-03-12 2023-11-01 Janssen Biotech Inc Methods for predicting response to the treatment of ulcerative colitis
CN114517228A (zh) * 2021-12-31 2022-05-20 青岛锐翌精准医学检验有限公司 炎症性肠病标志基因及其应用
CN114645088B (zh) * 2022-04-22 2023-12-15 广东省人民医院 克罗恩病进展风险相关评估基因集、试剂盒、应用和系统
EP4606910A1 (en) * 2024-02-21 2025-08-27 Royal College of Surgeons in Ireland Diagnostic and prognostic methods relating to ulcerative colitis

Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2005118851A1 (en) * 2004-06-02 2005-12-15 Diagenic As Oligonucleotides for cancer diagnosis
CN101970689A (zh) * 2007-11-29 2011-02-09 健泰科生物技术公司 炎性肠病的基因表达标志物
CN103025890A (zh) * 2010-04-06 2013-04-03 卡里斯生命科学卢森堡控股 疾病的循环生物标志物
WO2016066288A1 (en) * 2014-10-28 2016-05-06 Comprehensive Biomarker Center Gmbh Mirnas as non-invasive biomarkers for inflammatory bowel disease

Family Cites Families (22)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2006133287A2 (en) 2005-06-06 2006-12-14 Wyeth Expression profiles of peripheral blood mononuclear cells for inflammatory bowel diseases
GB0610949D0 (en) * 2006-06-02 2006-07-12 Glaxosmithkline Biolog Sa Method
JP2011516492A (ja) * 2008-04-02 2011-05-26 メタプロテオミクス, エルエルシー 内皮炎症及び内皮−単球相互作用の置換1,3−シクロペンタジオンによる減弱
KR100985090B1 (ko) * 2008-05-23 2010-10-04 한국과학기술연구원 크라이센 노출 여부 확인용 바이오마커 및 이를 이용한확인 방법
AU2010207640B2 (en) * 2009-01-20 2016-09-08 Cambridge Enterprise Limited Methods for predicting autoimmune disease risk
EP2419532A1 (en) * 2009-04-17 2012-02-22 Université Libre de Bruxelles Methods and tools for predicting the efficiency of anthracyclines in cancer
EP2272977A1 (en) 2009-07-08 2011-01-12 Universite Libre De Bruxelles Diagnostic method and kit for the detection of a lymphocytic variant of hypereosinophilic syndrome
JP2013526852A (ja) 2010-04-06 2013-06-27 カリス ライフ サイエンシズ ルクセンブルク ホールディングス 疾患に対する循環バイオマーカー
EP2678448A4 (en) 2011-02-22 2014-10-01 Caris Life Sciences Luxembourg Holdings S A R L CIRCULATING BIOMARKERS
AU2012253422B2 (en) 2011-05-10 2015-08-13 Société des Produits Nestlé S.A. Methods of disease activity profiling for personalized therapy management
SG11201402490XA (en) 2011-11-23 2014-06-27 Amgen Inc Methods of treatment using an antibody against interferon gamma
CA2867118A1 (en) 2012-03-13 2013-09-19 Baylor Research Institute Early detection of tuberculosis treatment response
EP2904405B1 (en) 2012-10-05 2017-05-31 Nestec S.A. Methods for predicting and monitoring mucosal healing
WO2014093872A1 (en) 2012-12-13 2014-06-19 Baylor Research Institute Blood transcriptional signatures of active pulmonary tuberculosis and sarcoidosis
CN105683392A (zh) * 2013-03-15 2016-06-15 博德研究所 树突细胞应答基因表达、物质组合物及其使用方法
WO2015120382A1 (en) * 2014-02-07 2015-08-13 The Johns Hopkins University Predicting response to epigenetic drug therapy
WO2015148809A1 (en) 2014-03-27 2015-10-01 Genentech, Inc. Methods for diagnosing and treating inflammatory bowel disease
US10443100B2 (en) 2014-05-22 2019-10-15 The Scripps Research Institute Gene expression profiles associated with sub-clinical kidney transplant rejection
WO2016138488A2 (en) * 2015-02-26 2016-09-01 The Broad Institute Inc. T cell balance gene expression, compositions of matters and methods of use thereof
US20180305689A1 (en) 2015-04-22 2018-10-25 Mina Therapeutics Limited Sarna compositions and methods of use
US20170003277A1 (en) * 2015-07-01 2017-01-05 Michael Hayden Biological characterization of a glatiramer acetate related drug product using mammalian and human cells
GB201611738D0 (en) 2016-07-05 2016-08-17 Cambridge Entpr Ltd Biomarkers for inflammatory bowel disease

Patent Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2005118851A1 (en) * 2004-06-02 2005-12-15 Diagenic As Oligonucleotides for cancer diagnosis
CN101970689A (zh) * 2007-11-29 2011-02-09 健泰科生物技术公司 炎性肠病的基因表达标志物
CN103025890A (zh) * 2010-04-06 2013-04-03 卡里斯生命科学卢森堡控股 疾病的循环生物标志物
WO2016066288A1 (en) * 2014-10-28 2016-05-06 Comprehensive Biomarker Center Gmbh Mirnas as non-invasive biomarkers for inflammatory bowel disease

Non-Patent Citations (2)

* Cited by examiner, † Cited by third party
Title
A CD8+ T cell transcription signature predicts prognosis in autoimmune disease;Eoin F McKinney等;《Nature Medicine》;20100418;第16卷(第5期);586-591 *
血清标志物对炎症性肠病诊断和预后评判应用进展;唐颢等;《中国实用内科杂志》;20150930;第35卷(第9期);794-797 *

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Publication number Publication date
CN109477145A (zh) 2019-03-15
US10640829B2 (en) 2020-05-05
AU2017293417B2 (en) 2019-11-14
LT3481964T (lt) 2022-04-11
DK3481964T3 (da) 2022-02-07
KR20190025637A (ko) 2019-03-11
WO2018007872A9 (en) 2018-03-15
US20180010187A1 (en) 2018-01-11
PT3481964T (pt) 2022-02-17
ES2906192T3 (es) 2022-04-13
US11041206B2 (en) 2021-06-22
EP3481964A1 (en) 2019-05-15
US20180010189A1 (en) 2018-01-11
NZ750396A (en) 2020-12-18
PL3481964T3 (pl) 2022-04-11
US10202651B2 (en) 2019-02-12
HUE058197T2 (hu) 2022-07-28
GB201611738D0 (en) 2016-08-17
CA3029912A1 (en) 2018-01-11
JP7111630B2 (ja) 2022-08-02
EP3481964B1 (en) 2021-12-29
JP2020198884A (ja) 2020-12-17
JP2019527039A (ja) 2019-09-26
WO2018007872A1 (en) 2018-01-11
US20190032140A1 (en) 2019-01-31
AU2017293417A1 (en) 2019-02-21
KR102352847B1 (ko) 2022-01-17

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