CN109477141B - 样品鉴定方法 - Google Patents
样品鉴定方法 Download PDFInfo
- Publication number
- CN109477141B CN109477141B CN201780040677.XA CN201780040677A CN109477141B CN 109477141 B CN109477141 B CN 109477141B CN 201780040677 A CN201780040677 A CN 201780040677A CN 109477141 B CN109477141 B CN 109477141B
- Authority
- CN
- China
- Prior art keywords
- barcode
- sequence
- nucleotide
- sequences
- nucleotide barcode
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
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Classifications
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6869—Methods for sequencing
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L3/00—Containers or dishes for laboratory use, e.g. laboratory glassware; Droppers
- B01L3/54—Labware with identification means
- B01L3/545—Labware with identification means for laboratory containers
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L2300/00—Additional constructional details
- B01L2300/02—Identification, exchange or storage of information
- B01L2300/021—Identification, e.g. bar codes
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2525/00—Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
- C12Q2525/10—Modifications characterised by
- C12Q2525/179—Modifications characterised by incorporating arbitrary or random nucleotide sequences
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2535/00—Reactions characterised by the assay type for determining the identity of a nucleotide base or a sequence of oligonucleotides
- C12Q2535/122—Massive parallel sequencing
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2545/00—Reactions characterised by their quantitative nature
- C12Q2545/10—Reactions characterised by their quantitative nature the purpose being quantitative analysis
- C12Q2545/101—Reactions characterised by their quantitative nature the purpose being quantitative analysis with an internal standard/control
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2563/00—Nucleic acid detection characterized by the use of physical, structural and functional properties
- C12Q2563/179—Nucleic acid detection characterized by the use of physical, structural and functional properties the label being a nucleic acid
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2563/00—Nucleic acid detection characterized by the use of physical, structural and functional properties
- C12Q2563/185—Nucleic acid dedicated to use as a hidden marker/bar code, e.g. inclusion of nucleic acids to mark art objects or animals
Landscapes
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Health & Medical Sciences (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Engineering & Computer Science (AREA)
- Analytical Chemistry (AREA)
- Molecular Biology (AREA)
- Microbiology (AREA)
- General Health & Medical Sciences (AREA)
- Biotechnology (AREA)
- Genetics & Genomics (AREA)
- Immunology (AREA)
- General Engineering & Computer Science (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Biochemistry (AREA)
- Physics & Mathematics (AREA)
- Biophysics (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Clinical Laboratory Science (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Micro-Organisms Or Cultivation Processes Thereof (AREA)
- Investigating Or Analysing Biological Materials (AREA)
- Apparatus Associated With Microorganisms And Enzymes (AREA)
Applications Claiming Priority (5)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| EP16169997.0 | 2016-05-17 | ||
| EP16169997.0A EP3246412A1 (en) | 2016-05-17 | 2016-05-17 | Methods for identification of samples |
| GB1701908.4 | 2017-02-06 | ||
| GBGB1701908.4A GB201701908D0 (en) | 2017-02-06 | 2017-02-06 | Methods for identification of samples |
| PCT/EP2017/061902 WO2017198742A1 (en) | 2016-05-17 | 2017-05-17 | Methods for identification of samples |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| CN109477141A CN109477141A (zh) | 2019-03-15 |
| CN109477141B true CN109477141B (zh) | 2022-07-12 |
Family
ID=58992806
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CN201780040677.XA Active CN109477141B (zh) | 2016-05-17 | 2017-05-17 | 样品鉴定方法 |
Country Status (9)
| Country | Link |
|---|---|
| US (1) | US12297495B2 (enExample) |
| EP (1) | EP3458606B1 (enExample) |
| JP (1) | JP7071341B2 (enExample) |
| KR (2) | KR20190037203A (enExample) |
| CN (1) | CN109477141B (enExample) |
| AU (2) | AU2017266299A1 (enExample) |
| CA (1) | CA3024355A1 (enExample) |
| ES (1) | ES3030501T3 (enExample) |
| WO (1) | WO2017198742A1 (enExample) |
Families Citing this family (11)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| IT201600103909A1 (it) * | 2016-10-17 | 2018-04-17 | Marco Flavio Michele Vismara | Sistema e metodo di acquisizione, trasmissione ed elaborazione di dati ematochimici |
| US11702653B2 (en) | 2018-05-21 | 2023-07-18 | Battelle Memorial Institute | Control compositions and methods for sequencing |
| WO2020124003A1 (en) * | 2018-12-13 | 2020-06-18 | Battelle Memorial Institute | Methods and control compositions for a quantitative polymerase chain reaction |
| US20220059187A1 (en) * | 2020-08-07 | 2022-02-24 | Oxford Nanopore Technologies Limited | Methods of detecting nucleic acid barcodes |
| AU2021356733B2 (en) * | 2020-10-06 | 2022-06-09 | Nucleotrace Pty. Ltd. | Oligonucleotides representing digital data |
| CN115812103A (zh) * | 2020-11-06 | 2023-03-17 | 伊鲁米纳公司 | 使用寡核苷酸检测混合物中的材料 |
| KR20220122095A (ko) * | 2021-02-26 | 2022-09-02 | 지니너스 주식회사 | 분자 바코딩 효율을 향상시키기 위한 조성물 및 이의 용도 |
| WO2022192603A1 (en) * | 2021-03-10 | 2022-09-15 | Factorial Diagnostics, Inc. | Cell barcoding compositions and methods |
| GB202108684D0 (en) * | 2021-06-17 | 2021-08-04 | Salmotrace As | Method of tagging fish and other animals |
| DE102023205182A1 (de) * | 2023-06-02 | 2024-12-05 | Labor Berlin - Charité Vivantes GmbH | Verfahren zur identitätsverifizierung von patientenproben |
| US12287321B2 (en) * | 2023-09-08 | 2025-04-29 | Truvian Sciences, Inc. | Optical multianalyte detection |
Citations (10)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2003052101A1 (en) * | 2001-12-14 | 2003-06-26 | Rosetta Inpharmatics, Inc. | Sample tracking using molecular barcodes |
| CN101479750A (zh) * | 2006-05-11 | 2009-07-08 | 奇异编号有限公司 | 识别目标物的方法,识别标签,适于被识别的目标物以及相关装置和系统 |
| AU2007254626A1 (en) * | 2007-12-21 | 2009-07-09 | Canon Kabushiki Kaisha | Data encoding and decoding using circular configurations of marks |
| EP2201143A2 (en) * | 2007-09-21 | 2010-06-30 | Katholieke Universiteit Leuven | Tools and methods for genetic tests using next generation sequencing |
| WO2012019765A1 (en) * | 2010-08-10 | 2012-02-16 | European Molecular Biology Laboratory (Embl) | Methods and systems for tracking samples and sample combinations |
| CN103459038A (zh) * | 2011-01-06 | 2013-12-18 | 艾皮斯托姆有限公司 | 用于热循环的方法和系统 |
| CN103582887A (zh) * | 2011-06-07 | 2014-02-12 | 皇家飞利浦有限公司 | 提供核苷酸序列数据 |
| CN104603287A (zh) * | 2012-05-10 | 2015-05-06 | 通用医疗公司 | 用于测定核苷酸序列的方法 |
| CN104736722A (zh) * | 2012-05-21 | 2015-06-24 | 斯克利普斯研究所 | 样品制备方法 |
| CN105200530A (zh) * | 2015-10-13 | 2015-12-30 | 北京百迈客生物科技有限公司 | 一种适用于高通量全基因组测序的多样品混合文库的构建方法 |
Family Cites Families (22)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US5459073A (en) | 1991-05-08 | 1995-10-17 | Streck Laboratories, Inc. | Method and composition for preserving antigens and process for utilizing cytological material produced by same |
| US6030657A (en) | 1994-11-01 | 2000-02-29 | Dna Technologies, Inc. | Labeling technique for countering product diversion and product counterfeiting |
| US5776737A (en) | 1994-12-22 | 1998-07-07 | Visible Genetics Inc. | Method and composition for internal identification of samples |
| ATE347617T1 (de) | 1999-05-06 | 2006-12-15 | Sinai School Medicine | Steganographie auf dna basis |
| EP1515268A3 (en) * | 2001-03-01 | 2007-12-12 | NTT Data Technology Corporation | Method and system for individual authentication and digital signature utilizing article having DNA based ID information mark |
| GB2390055B (en) | 2002-03-22 | 2005-09-07 | Cypher Science Internat Ltd | A marking apparatus |
| US20040157220A1 (en) | 2003-02-10 | 2004-08-12 | Purnima Kurnool | Methods and apparatus for sample tracking |
| US20100285985A1 (en) | 2003-04-15 | 2010-11-11 | Applied Dna Sciences, Inc. | Methods and Systems for the Generation of Plurality of Security Markers and the Detection Therof |
| US8927213B2 (en) | 2004-12-23 | 2015-01-06 | Greg Hampikian | Reference markers for biological samples |
| WO2005093641A1 (en) * | 2004-03-26 | 2005-10-06 | Universite Libre De Bruxelles | Biological samples localisation, identification and tracking, system and method using electronic tag |
| US20150141264A1 (en) * | 2005-05-20 | 2015-05-21 | Apdn (B.V.I.) Inc. | In-field dna extraction, detection and authentication methods and systems therefor |
| US8785130B2 (en) | 2005-07-07 | 2014-07-22 | Bio-Id Diagnostic Inc. | Use of markers including nucleotide sequence based codes to monitor methods of detection and identification of genetic material |
| EP1924704B1 (en) | 2005-08-02 | 2011-05-25 | Rubicon Genomics, Inc. | Compositions and methods for processing and amplification of dna, including using multiple enzymes in a single reaction |
| US20080101666A1 (en) * | 2006-10-30 | 2008-05-01 | Cytyc Corporation | Automated imaging system with slide marking |
| GB2472371B (en) | 2009-04-24 | 2011-10-26 | Selectamark Security Systems Plc | Synthetic nucleotide containing compositions for use in security marking of property and/or for marking a thief or attacker |
| EP2670863B1 (en) * | 2011-01-31 | 2018-06-27 | H. Hoffnabb-La Roche Ag | Methods of identifying multiple epitopes in cells |
| CA2872017A1 (en) * | 2012-05-09 | 2013-11-14 | Apdn (B.V.I.) Inc. | Verification of physical encryption taggants using digital representatives and authentications thereof |
| WO2014005184A1 (en) | 2012-07-06 | 2014-01-09 | Geneworks Technologies Pty Ltd | Method of identification using nucleic acid tags |
| EP2938742B1 (en) | 2012-12-28 | 2017-02-15 | Fleury S.A. | Method for complete tracking of a set of biological samples containing dna or rna through molecular barcode identification during laboratorial workflow and kit for collecting biological samples containing dna or rna |
| WO2014152775A2 (en) | 2013-03-14 | 2014-09-25 | Certirx Corporation | Nucleic acid-based authentication and identification codes |
| US20150141257A1 (en) | 2013-08-02 | 2015-05-21 | Roche Nimblegen, Inc. | Sequence capture method using specialized capture probes (heatseq) |
| CN108449933A (zh) * | 2015-11-18 | 2018-08-24 | 宝生物工程(美国)有限公司 | 用于汇集来自多孔装置的样品的系统和方法 |
-
2017
- 2017-05-17 EP EP17727124.4A patent/EP3458606B1/en active Active
- 2017-05-17 KR KR1020187036548A patent/KR20190037203A/ko not_active Ceased
- 2017-05-17 US US16/302,345 patent/US12297495B2/en active Active
- 2017-05-17 CA CA3024355A patent/CA3024355A1/en active Pending
- 2017-05-17 JP JP2019513484A patent/JP7071341B2/ja active Active
- 2017-05-17 AU AU2017266299A patent/AU2017266299A1/en not_active Abandoned
- 2017-05-17 WO PCT/EP2017/061902 patent/WO2017198742A1/en not_active Ceased
- 2017-05-17 KR KR1020237014184A patent/KR102806552B1/ko active Active
- 2017-05-17 CN CN201780040677.XA patent/CN109477141B/zh active Active
- 2017-05-17 ES ES17727124T patent/ES3030501T3/es active Active
-
2023
- 2023-09-14 AU AU2023229558A patent/AU2023229558B2/en active Active
Patent Citations (10)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2003052101A1 (en) * | 2001-12-14 | 2003-06-26 | Rosetta Inpharmatics, Inc. | Sample tracking using molecular barcodes |
| CN101479750A (zh) * | 2006-05-11 | 2009-07-08 | 奇异编号有限公司 | 识别目标物的方法,识别标签,适于被识别的目标物以及相关装置和系统 |
| EP2201143A2 (en) * | 2007-09-21 | 2010-06-30 | Katholieke Universiteit Leuven | Tools and methods for genetic tests using next generation sequencing |
| AU2007254626A1 (en) * | 2007-12-21 | 2009-07-09 | Canon Kabushiki Kaisha | Data encoding and decoding using circular configurations of marks |
| WO2012019765A1 (en) * | 2010-08-10 | 2012-02-16 | European Molecular Biology Laboratory (Embl) | Methods and systems for tracking samples and sample combinations |
| CN103459038A (zh) * | 2011-01-06 | 2013-12-18 | 艾皮斯托姆有限公司 | 用于热循环的方法和系统 |
| CN103582887A (zh) * | 2011-06-07 | 2014-02-12 | 皇家飞利浦有限公司 | 提供核苷酸序列数据 |
| CN104603287A (zh) * | 2012-05-10 | 2015-05-06 | 通用医疗公司 | 用于测定核苷酸序列的方法 |
| CN104736722A (zh) * | 2012-05-21 | 2015-06-24 | 斯克利普斯研究所 | 样品制备方法 |
| CN105200530A (zh) * | 2015-10-13 | 2015-12-30 | 北京百迈客生物科技有限公司 | 一种适用于高通量全基因组测序的多样品混合文库的构建方法 |
Non-Patent Citations (1)
| Title |
|---|
| A scalable, fully automated process for construction of sequence-ready barcoded libraries for 454;Niall J Lennon等;《Genome Biology》;20100205;第11卷;R15 * |
Also Published As
| Publication number | Publication date |
|---|---|
| KR20190037203A (ko) | 2019-04-05 |
| AU2023229558B2 (en) | 2025-07-31 |
| KR20230065357A (ko) | 2023-05-11 |
| CN109477141A (zh) | 2019-03-15 |
| EP3458606C0 (en) | 2025-04-02 |
| ES3030501T3 (en) | 2025-06-30 |
| CA3024355A1 (en) | 2017-11-23 |
| AU2017266299A1 (en) | 2018-12-20 |
| EP3458606A1 (en) | 2019-03-27 |
| AU2023229558A1 (en) | 2023-09-28 |
| JP2019523652A (ja) | 2019-08-29 |
| EP3458606B1 (en) | 2025-04-02 |
| US12297495B2 (en) | 2025-05-13 |
| JP7071341B2 (ja) | 2022-05-18 |
| WO2017198742A1 (en) | 2017-11-23 |
| US20190300948A1 (en) | 2019-10-03 |
| KR102806552B1 (ko) | 2025-05-13 |
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| PB01 | Publication | ||
| PB01 | Publication | ||
| SE01 | Entry into force of request for substantive examination | ||
| SE01 | Entry into force of request for substantive examination | ||
| GR01 | Patent grant | ||
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