CA3024355A1 - Methods for identification of samples - Google Patents

Methods for identification of samples Download PDF

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Publication number
CA3024355A1
CA3024355A1 CA3024355A CA3024355A CA3024355A1 CA 3024355 A1 CA3024355 A1 CA 3024355A1 CA 3024355 A CA3024355 A CA 3024355A CA 3024355 A CA3024355 A CA 3024355A CA 3024355 A1 CA3024355 A1 CA 3024355A1
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CA
Canada
Prior art keywords
sequences
barcode
nucleotide
sequence
nucleotide barcode
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Pending
Application number
CA3024355A
Other languages
English (en)
French (fr)
Inventor
Harry Cuppens
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Dname-It Nv
Original Assignee
Dname-It Nv
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from EP16169997.0A external-priority patent/EP3246412A1/en
Priority claimed from GBGB1701908.4A external-priority patent/GB201701908D0/en
Application filed by Dname-It Nv filed Critical Dname-It Nv
Publication of CA3024355A1 publication Critical patent/CA3024355A1/en
Pending legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L3/00—Containers or dishes for laboratory use, e.g. laboratory glassware; Droppers
    • B01L3/54—Labware with identification means
    • B01L3/545—Labware with identification means for laboratory containers
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
    • B01L2300/00—Additional constructional details
    • B01L2300/02—Identification, exchange or storage of information
    • B01L2300/021—Identification, e.g. bar codes
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2525/00—Reactions involving modified oligonucleotides, nucleic acids, or nucleotides
    • C12Q2525/10—Modifications characterised by
    • C12Q2525/179—Modifications characterised by incorporating arbitrary or random nucleotide sequences
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2535/00—Reactions characterised by the assay type for determining the identity of a nucleotide base or a sequence of oligonucleotides
    • C12Q2535/122—Massive parallel sequencing
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2545/00—Reactions characterised by their quantitative nature
    • C12Q2545/10—Reactions characterised by their quantitative nature the purpose being quantitative analysis
    • C12Q2545/101—Reactions characterised by their quantitative nature the purpose being quantitative analysis with an internal standard/control
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2563/00—Nucleic acid detection characterized by the use of physical, structural and functional properties
    • C12Q2563/179—Nucleic acid detection characterized by the use of physical, structural and functional properties the label being a nucleic acid
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2563/00—Nucleic acid detection characterized by the use of physical, structural and functional properties
    • C12Q2563/185—Nucleic acid dedicated to use as a hidden marker/bar code, e.g. inclusion of nucleic acids to mark art objects or animals

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Analytical Chemistry (AREA)
  • Molecular Biology (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Genetics & Genomics (AREA)
  • Immunology (AREA)
  • Biotechnology (AREA)
  • General Health & Medical Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Microbiology (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Clinical Laboratory Science (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
  • Micro-Organisms Or Cultivation Processes Thereof (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
CA3024355A 2016-05-17 2017-05-17 Methods for identification of samples Pending CA3024355A1 (en)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
EP16169997.0 2016-05-17
EP16169997.0A EP3246412A1 (en) 2016-05-17 2016-05-17 Methods for identification of samples
GB1701908.4 2017-02-06
GBGB1701908.4A GB201701908D0 (en) 2017-02-06 2017-02-06 Methods for identification of samples
PCT/EP2017/061902 WO2017198742A1 (en) 2016-05-17 2017-05-17 Methods for identification of samples

Publications (1)

Publication Number Publication Date
CA3024355A1 true CA3024355A1 (en) 2017-11-23

Family

ID=58992806

Family Applications (1)

Application Number Title Priority Date Filing Date
CA3024355A Pending CA3024355A1 (en) 2016-05-17 2017-05-17 Methods for identification of samples

Country Status (9)

Country Link
US (1) US12297495B2 (enExample)
EP (1) EP3458606B1 (enExample)
JP (1) JP7071341B2 (enExample)
KR (2) KR102806552B1 (enExample)
CN (1) CN109477141B (enExample)
AU (2) AU2017266299A1 (enExample)
CA (1) CA3024355A1 (enExample)
ES (1) ES3030501T3 (enExample)
WO (1) WO2017198742A1 (enExample)

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IT201600103909A1 (it) * 2016-10-17 2018-04-17 Marco Flavio Michele Vismara Sistema e metodo di acquisizione, trasmissione ed elaborazione di dati ematochimici
US11702653B2 (en) 2018-05-21 2023-07-18 Battelle Memorial Institute Control compositions and methods for sequencing
EP3894553B1 (en) 2018-12-13 2025-10-08 Battelle Memorial Institute Methods for a quantitative polymerase chain reaction
IL298245A (en) 2020-05-18 2023-01-01 Truvian Sciences Inc An optical assembly for continuous scanning and a method for using it
CN116075596A (zh) * 2020-08-07 2023-05-05 牛津纳米孔科技公开有限公司 鉴定核酸条形码的方法
US12636859B2 (en) 2020-09-22 2026-05-26 Truvian Sciences, Inc. Methods for bonding plastics and components made by the same
EP4226379A4 (en) * 2020-10-06 2024-10-30 Nucleotrace Pty. Ltd. Oligonucleotides representing digital data
AU2021374567A1 (en) * 2020-11-06 2023-01-05 Illumina, Inc. Detecting materials in a mixture using oligonucleotides
KR102924534B1 (ko) * 2021-02-26 2026-02-06 지니너스 주식회사 분자 바코딩 효율을 향상시키기 위한 조성물 및 이의 용도
WO2022192603A1 (en) * 2021-03-10 2022-09-15 Factorial Diagnostics, Inc. Cell barcoding compositions and methods
GB202108684D0 (en) * 2021-06-17 2021-08-04 Salmotrace As Method of tagging fish and other animals
US12637722B2 (en) 2022-01-10 2026-05-26 Natural Trace Pte. Ltd. Method for confirming the identity of a product by means of a microbial DNA tag
USD1116151S1 (en) 2023-05-03 2026-03-03 Truvian Sciences, Inc. Monolayer
DE102023205182A1 (de) * 2023-06-02 2024-12-05 Labor Berlin - Charité Vivantes GmbH Verfahren zur identitätsverifizierung von patientenproben
US12287321B2 (en) * 2023-09-08 2025-04-29 Truvian Sciences, Inc. Optical multianalyte detection
FR3170768A1 (fr) * 2024-12-19 2026-06-26 Genaro Procédé de chiffrement de données génétiques d’un sujet

Family Cites Families (32)

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Publication number Priority date Publication date Assignee Title
US5459073A (en) 1991-05-08 1995-10-17 Streck Laboratories, Inc. Method and composition for preserving antigens and process for utilizing cytological material produced by same
US6030657A (en) 1994-11-01 2000-02-29 Dna Technologies, Inc. Labeling technique for countering product diversion and product counterfeiting
US5776737A (en) 1994-12-22 1998-07-07 Visible Genetics Inc. Method and composition for internal identification of samples
AU4703300A (en) 1999-05-06 2000-11-21 Mount Sinai School Of Medicine Of The City University Of New York, The Dna-based steganography
US20020129251A1 (en) 2001-03-01 2002-09-12 Yukio Itakura Method and system for individual authentication and digital signature utilizing article having DNA based ID information mark
WO2003052101A1 (en) * 2001-12-14 2003-06-26 Rosetta Inpharmatics, Inc. Sample tracking using molecular barcodes
GB2390055B (en) 2002-03-22 2005-09-07 Cypher Science Internat Ltd A marking apparatus
US20040157220A1 (en) 2003-02-10 2004-08-12 Purnima Kurnool Methods and apparatus for sample tracking
US20100285985A1 (en) 2003-04-15 2010-11-11 Applied Dna Sciences, Inc. Methods and Systems for the Generation of Plurality of Security Markers and the Detection Therof
US8927213B2 (en) 2004-12-23 2015-01-06 Greg Hampikian Reference markers for biological samples
WO2005093641A1 (en) * 2004-03-26 2005-10-06 Universite Libre De Bruxelles Biological samples localisation, identification and tracking, system and method using electronic tag
US20150141264A1 (en) 2005-05-20 2015-05-21 Apdn (B.V.I.) Inc. In-field dna extraction, detection and authentication methods and systems therefor
US8785130B2 (en) 2005-07-07 2014-07-22 Bio-Id Diagnostic Inc. Use of markers including nucleotide sequence based codes to monitor methods of detection and identification of genetic material
DK1924704T3 (da) 2005-08-02 2011-09-05 Rubicon Genomics Inc Sammensætninger og fremgangsmåder til bearbejdning og mangfoldiggørelse af DNA, herunder ved anvendelse af flere enzymer i en enkelt reaktion
EP2016539A4 (en) * 2006-05-11 2010-06-09 Singular Id Pte Ltd OBJECT IDENTIFICATION METHOD, IDENTIFICATION LABEL, OBJECT ADAPTED TO BE IDENTIFIED, AND DEVICE AND SYSTEM RELATED THERETO
US20080101666A1 (en) * 2006-10-30 2008-05-01 Cytyc Corporation Automated imaging system with slide marking
CA2697640C (en) 2007-09-21 2016-06-21 Katholieke Universiteit Leuven Tools and methods for genetic tests using next generation sequencing
AU2007254626A1 (en) * 2007-12-21 2009-07-09 Canon Kabushiki Kaisha Data encoding and decoding using circular configurations of marks
GB2472371B (en) 2009-04-24 2011-10-26 Selectamark Security Systems Plc Synthetic nucleotide containing compositions for use in security marking of property and/or for marking a thief or attacker
WO2012019765A1 (en) * 2010-08-10 2012-02-16 European Molecular Biology Laboratory (Embl) Methods and systems for tracking samples and sample combinations
GB201100152D0 (en) * 2011-01-06 2011-02-23 Epistem Ltd Genedrive RFID
CN103703143B (zh) * 2011-01-31 2016-12-14 爱普瑞斯生物公司 鉴定细胞中的多个表位的方法
WO2012168803A2 (en) * 2011-06-07 2012-12-13 Koninklijke Philips Electronics N.V. Providing nucleotide sequence data
CA2872017A1 (en) 2012-05-09 2013-11-14 Apdn (B.V.I.) Inc. Verification of physical encryption taggants using digital representatives and authentications thereof
EP4026912A1 (en) * 2012-05-10 2022-07-13 The General Hospital Corporation Methods for determining a nucleotide sequence
WO2013177220A1 (en) * 2012-05-21 2013-11-28 The Scripps Research Institute Methods of sample preparation
US20150167054A1 (en) 2012-07-06 2015-06-18 Geneworks Technologies Pty Ltd a corporation Method of identification using nucleic acid tags
US20150322508A1 (en) 2012-12-28 2015-11-12 Fleury S.A. Method for complete tracking of a set of biological samples containing dna or rna through molecular barcode identification during laboratorial workflow and kit for collecting biological samples containing dna or rna
WO2014152775A2 (en) 2013-03-14 2014-09-25 Certirx Corporation Nucleic acid-based authentication and identification codes
US20150141257A1 (en) 2013-08-02 2015-05-21 Roche Nimblegen, Inc. Sequence capture method using specialized capture probes (heatseq)
CN105200530A (zh) * 2015-10-13 2015-12-30 北京百迈客生物科技有限公司 一种适用于高通量全基因组测序的多样品混合文库的构建方法
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Also Published As

Publication number Publication date
AU2023229558B2 (en) 2025-07-31
AU2023229558A1 (en) 2023-09-28
KR20190037203A (ko) 2019-04-05
CN109477141B (zh) 2022-07-12
CN109477141A (zh) 2019-03-15
KR20230065357A (ko) 2023-05-11
EP3458606B1 (en) 2025-04-02
JP7071341B2 (ja) 2022-05-18
KR102806552B1 (ko) 2025-05-13
WO2017198742A1 (en) 2017-11-23
EP3458606C0 (en) 2025-04-02
ES3030501T3 (en) 2025-06-30
JP2019523652A (ja) 2019-08-29
AU2017266299A1 (en) 2018-12-20
US12297495B2 (en) 2025-05-13
US20190300948A1 (en) 2019-10-03
EP3458606A1 (en) 2019-03-27

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