CN107849600A - 用于分子标记的方法、系统、组合物、试剂盒、装置和计算机可读媒体 - Google Patents
用于分子标记的方法、系统、组合物、试剂盒、装置和计算机可读媒体 Download PDFInfo
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- CN107849600A CN107849600A CN201680042448.7A CN201680042448A CN107849600A CN 107849600 A CN107849600 A CN 107849600A CN 201680042448 A CN201680042448 A CN 201680042448A CN 107849600 A CN107849600 A CN 107849600A
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- Prior art keywords
- sequence
- polynucleotide
- sequencing reads
- tag
- polynucleotides
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
- C12Q1/6886—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6869—Methods for sequencing
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6869—Methods for sequencing
- C12Q1/6874—Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/156—Polymorphic or mutational markers
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- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Health & Medical Sciences (AREA)
- Wood Science & Technology (AREA)
- Engineering & Computer Science (AREA)
- Zoology (AREA)
- Genetics & Genomics (AREA)
- Immunology (AREA)
- Analytical Chemistry (AREA)
- Molecular Biology (AREA)
- Biochemistry (AREA)
- Microbiology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Biotechnology (AREA)
- Physics & Mathematics (AREA)
- Biophysics (AREA)
- Pathology (AREA)
- Hospice & Palliative Care (AREA)
- Oncology (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Chemical Kinetics & Catalysis (AREA)
Applications Claiming Priority (15)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201562172836P | 2015-06-09 | 2015-06-09 | |
| US62/172,836 | 2015-06-09 | ||
| US201562207177P | 2015-08-19 | 2015-08-19 | |
| US62/207,177 | 2015-08-19 | ||
| US201562248978P | 2015-10-30 | 2015-10-30 | |
| US62/248,978 | 2015-10-30 | ||
| US201662304530P | 2016-03-07 | 2016-03-07 | |
| US62/304,530 | 2016-03-07 | ||
| US201662310647P | 2016-03-18 | 2016-03-18 | |
| US62/310,647 | 2016-03-18 | ||
| US201662311276P | 2016-03-21 | 2016-03-21 | |
| US62/311,276 | 2016-03-21 | ||
| US201662323142P | 2016-04-15 | 2016-04-15 | |
| US62/323,142 | 2016-04-15 | ||
| PCT/US2016/036763 WO2016201142A1 (en) | 2015-06-09 | 2016-06-09 | Methods, systems, compositions, kits, apparatus and computer-readable media for molecular tagging |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| CN107849600A true CN107849600A (zh) | 2018-03-27 |
Family
ID=56292898
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CN201680042448.7A Pending CN107849600A (zh) | 2015-06-09 | 2016-06-09 | 用于分子标记的方法、系统、组合物、试剂盒、装置和计算机可读媒体 |
Country Status (5)
| Country | Link |
|---|---|
| US (3) | US10344336B2 (https=) |
| EP (2) | EP3307908B1 (https=) |
| JP (1) | JP6698708B2 (https=) |
| CN (1) | CN107849600A (https=) |
| WO (1) | WO2016201142A1 (https=) |
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| CN108486230A (zh) * | 2018-05-18 | 2018-09-04 | 中国人民解放军陆军军医大学第附属医院 | 用于无创检测mitf基因突变的试剂盒及其制备方法 |
| CN108959851A (zh) * | 2018-06-12 | 2018-12-07 | 哈尔滨工程大学 | 一种Illumina高通量测序数据误差校正方法 |
| CN111254198A (zh) * | 2020-03-09 | 2020-06-09 | 苏州宏元生物科技有限公司 | 一种尿路上皮癌诊断和预后评估试剂盒 |
| CN111466508A (zh) * | 2020-04-10 | 2020-07-31 | 四川长虹电器股份有限公司 | 射频解冻装置、冰箱及射频解冻方法 |
| CN112029840A (zh) * | 2019-06-04 | 2020-12-04 | 希森美康株式会社 | 核酸序列的分析方法 |
| CN112654715A (zh) * | 2018-12-19 | 2021-04-13 | 亿明达股份有限公司 | 改进多核苷酸簇克隆性优先性的方法 |
| CN114514328A (zh) * | 2019-08-21 | 2022-05-17 | 生命技术公司 | 用于测序的系统和方法 |
| TWI902068B (zh) * | 2022-12-02 | 2025-10-21 | 盛生生技有限公司 | 磁性支架 |
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| EP3102691B1 (en) * | 2014-02-03 | 2019-09-11 | Thermo Fisher Scientific Baltics UAB | Method for controlled dna fragmentation |
| US11136576B2 (en) | 2014-02-03 | 2021-10-05 | Thermo Fisher Scientific Baltics Uab | Method for controlled DNA fragmentation |
| US10196678B2 (en) | 2014-10-06 | 2019-02-05 | ALVEO Technologies Inc. | System and method for detection of nucleic acids |
| EP3307908B1 (en) | 2015-06-09 | 2019-09-11 | Life Technologies Corporation | Methods for molecular tagging |
| CA3006792A1 (en) | 2015-12-08 | 2017-06-15 | Twinstrand Biosciences, Inc. | Improved adapters, methods, and compositions for duplex sequencing |
| CN109996888A (zh) | 2016-09-23 | 2019-07-09 | 阿尔韦奥科技公司 | 用于检测分析物的方法和组合物 |
| SG11201901730QA (en) | 2016-09-27 | 2019-03-28 | Ubiome Inc | Method and system for crispr-based library preparation and sequencing |
| IL266197B2 (en) | 2016-10-24 | 2024-03-01 | Geneinfosec Inc | Hiding information contained within nucleic acids |
| WO2018089944A1 (en) | 2016-11-11 | 2018-05-17 | uBiome, Inc. | Method and system for fragment assembly and sequence identification |
| CA3049455C (en) * | 2017-01-20 | 2023-06-13 | Sequenom, Inc. | Sequencing adapter manufacture and use |
| EP3625714B1 (en) | 2017-05-16 | 2021-03-17 | Life Technologies Corporation | Methods for compression of molecular tagged nucleic acid sequence data |
| CN110997934B (zh) * | 2017-05-31 | 2025-02-28 | 生捷科技控股公司 | 具有电子检测系统的寡核苷酸探针阵列 |
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| ES3055990T3 (en) * | 2017-06-20 | 2026-02-17 | Illumina Inc | Methods for addressing inefficiencies in amplification reactions |
| JP2020532976A (ja) * | 2017-09-14 | 2020-11-19 | エフ．ホフマン−ラ ロシュ アーゲーＦ． Ｈｏｆｆｍａｎｎ−Ｌａ Ｒｏｃｈｅ Ａｋｔｉｅｎｇｅｓｅｌｌｓｃｈａｆｔ | 環状一本鎖ｄｎａライブラリーを生成するための新規な方法 |
| CN111108218B (zh) | 2017-09-20 | 2024-06-25 | 生命科技股份有限公司 | 使用压缩的分子标记的核酸序列数据检测融合的方法 |
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| CN119264211A (zh) | 2018-08-27 | 2025-01-07 | 瑞泽恩制药公司 | 拉曼光谱在下游纯化中的应用 |
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| JP7532396B2 (ja) | 2019-03-22 | 2024-08-13 | ライフ テクノロジーズ コーポレーション | パートナー非依存性遺伝子融合検出のための方法 |
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| US20190323091A1 (en) | 2019-10-24 |
| EP3653728B1 (en) | 2023-02-01 |
| US20160362748A1 (en) | 2016-12-15 |
| US20210363596A1 (en) | 2021-11-25 |
| EP3653728A1 (en) | 2020-05-20 |
| EP3307908B1 (en) | 2019-09-11 |
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| US11124842B2 (en) | 2021-09-21 |
| US10344336B2 (en) | 2019-07-09 |
| JP6698708B2 (ja) | 2020-05-27 |
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