CN107083412A - A kind of application of middle short chain acyl CoA synthase - Google Patents

A kind of application of middle short chain acyl CoA synthase Download PDF

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CN107083412A
CN107083412A CN201710440525.0A CN201710440525A CN107083412A CN 107083412 A CN107083412 A CN 107083412A CN 201710440525 A CN201710440525 A CN 201710440525A CN 107083412 A CN107083412 A CN 107083412A
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刘超
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Abstract

The present invention relates to a kind of application of middle short chain acyl CoA synthase.The applying step is as follows:(1) middle short chain acyl CoA synthase of the amino acid sequence as shown in SEQ ID NO.2 is prepared;(2) reaction system is prepared using middle short chain acyl CoA synthase made from step (1);(3) after reacting, terminating reaction removes zymoprotein, purified, dries, produces.Present invention firstly discloses the technical scheme by middle short chain acyl CoA synthase preparation enoyl CoA in 2 heptan and hexamethylene methylacyl coenzyme A; overcome and be only capable of thinking that malonyl coenzyme A synzyme can only be with 1 in the prior art; 3 dicarboxylic acids or its salt are used as substrate; it is catalyzed them and forms corresponding acyl-CoA product; and the technology prejudice using monocarboxylic acid as the reaction of substrate can not possibly be catalyzed, widen the application of the enzyme.

Description

A kind of application of middle short chain acyl CoA synthase
Technical field
The present invention relates to a kind of application of middle short chain acyl CoA synthase, more particularly to a kind of middle short chain acyl coacetylase Application of the synzyme in 2- enoyl CoAs in heptan, hexamethylene methylacyl coenzyme A is prepared, belongs to technical field of enzyme engineering.
Background technology
Coacetylase (coenzyme A, CoA) contributes to Acyl activating and transfer crucial co-factor during being enzymatic reaction, Aliphatic acid, macrolide (macrolides), aromatic compound biosynthesis, catabolism or oxidizing process, carbohydrate Modification, and played a significant role in the extensive biological pathway such as enzyme regulation and control.It is estimated that thering is 4% to make among known enzyme Co-factor is used as with CoA.
Acyl-CoA (acyl-CoA) is that CoA sulfydryl (- SH) is covalently attached to the carboxyl (- COOH) formation of free carboxy acid Interim compound, as acry radical donor primary and secondary metabolism in be essential.Macrolide, polyethers (polyethers), the compound such as polyenoid (polyenes), flavonoids (flavonoids), stilbene class (stilbenes) is to excavate The important sources of natural products with medical value, and the biosynthesis of above-mentioned polyketone class secondary metabolites all refer to it is all kinds of In, short chain acyl CoA (medium, short-chain acyl-CoA) be used as construction unit.Various acyl-CoA is used as starting Or extension apparatus is integrated into the skeleton of polyketone molecule under polyketide synthase (PKS) catalysis.
Up to the present, researcher still must not independent of various acyl-CoAs,13The acyl-CoA of C- marks, radioactivity Mark14C- acyl-CoAs carry out the research experiment of polyketone class natural drug biosynthesis.Currently, only Sigma-Aldrich etc. Only a few offshore company can provide the acyl-CoA reagent of commercialization, but kind is extremely limited and price is extremely expensive, every gram Price is up to 12.2-53.6 ten thousand yuan, shown in such as table 1 (the commercialization acyl-CoA reagent information of Sigma-Aldrich companies):
Table 1
Kind just because of the acyl-CoA derivative of existing commercialization is fairly limited, and some species are in economy On make us hanging back or it is commercial can not obtain, be also difficult to synthesize using chemical method, it is domestic each for can independently synthesize The demand of the new acyl-CoA derivative of the form of kind is very urgent.
At present, the substrate broad spectrum activity that has been reported is most wide, synthesizing acyl CoA species most abundant acylCoA synthetase Product is only limitted to malonyl CoA (malonyl-CoA), methylmalonyl CoA (methylmalonyl-CoA), ethyl malonyl CoA (ethylmalonyl-CoA), methoxyl group malonyl CoA (methoxymalonyl-CoA), hydroxyl malonyl CoA (hydroxymalonyl-CoA), report is had no for the enzyme that can synthesize more other acyl-CoAs.
The content of the invention
In view of the deficiencies of the prior art, the present invention provides a kind of application of middle short chain acyl CoA synthase.
Technical solution of the present invention is as follows:
A kind of application of middle short chain acyl CoA synthase in 2- enoyl CoAs in heptan, hexamethylene methylacyl coenzyme A is prepared.
Above-mentioned application, step is as follows:
(1) middle short chain acyl CoA synthase of the amino acid sequence as shown in SEQ ID NO.2 is prepared;
(2) it is formulated as follows reaction system using middle short chain acyl CoA synthase made from step (1):
100mM 4- hydroxyethyl piperazineethanesulfonic acids;The glycerine of quality percent by volume 10%, unit g/ml;100mM magnesium chlorides; 15~50mM2- heptenoic acids, the sodium salt of 2- heptenoic acids, the sodium salt of naphthenic acid or naphthenic acid;20mM atriphos; 5mM coacetylases;The malonyl coenzyme A synzyme of 10 μM of purifying;pH 7.5;
(3) above-mentioned reaction system reacts 7.5~10h under the conditions of 20~24 DEG C, and terminating reaction removes zymoprotein, through pure Change, dry, produce.
It is short in preparing amino acid sequence as shown in SEQ ID NO.2 in the step (1) according to currently preferred Chain acyl CoA synthase is adopted with the following method:
The malonyl coenzyme A synthase gene for expanding streptomyces coelicolor is reacted through PCR using primer matBF and matBR MatB, then by construction of expression vector and engineering bacteria, then induced expression closes through Ni-NTA ni-sepharose purifications malonyl coenzyme A Into enzyme, produce;
The nucleotide sequence of the primer matBF and matBR is as follows:
matBF:5’-TCGATTGCACATATGTCCTCTCTCTTCCCGGCCCTCT-3’
matBR:5’-ATCGGATAGCTCGAGTCAGTCACGGTTCAGCGCCCGCTT-3’。
According to currently preferred, in the step (3), remove zymoprotein to remove using ultrafiltration centrifugal filtration.
According to currently preferred, in the step (3), described purifying is to be purified using HPLC chromatogram.
According to currently preferred, in the step (3), the drying is to be carried out using vacuum freeze-drying method.
The encoding gene of above-mentioned middle short chain acyl CoA synthase (malonyl coenzyme A synzyme) derives from sky blue chain Mould ZM12 (being purchased from synthetic biology key lab of the Chinese Academy of Sciences) matB genes, total length 1458bp (base-pair), such as Shown in SEQ ID NO.1,485 residues of its amino acid sequence total length, as shown in SEQ ID NO.2, molecular weight 50.6kDa.Should Enzyme has larger N- ends body (residue 1-387) and less C- end caps (residue 388-485).The enzyme with carboxylic acid or its Salt, ATP, CoA are substrate, are catalyzed the biosynthesis of a variety of acyl-CoAs.
The two-step reaction mechanism of above-mentioned malonyl coenzyme A synzyme is as shown in Figure 1:
In adenylate formation reaction, ATP alpha-phosphate is attacked to form acyl group-adenylate by the carboxyl of carboxylic acid derivates Intermediate and pyrophosphoric acid (PPi);Thioesters formation reaction in, CoA displacement AMP (AMP) with produce acyl-CoA and AMP。
Inventor has found that the enzyme has widely by furtheing investigate malonyl coenzyme A synzyme of the present invention Carboxylic acid substrate tolerance, this has overturned original cognition to such malonyl coenzyme A synzyme, and the enzyme can not only be with 1,3- bis- Carboxylic acid and its C-2 substitutive derivatives are substrate, moreover it is possible to using straight chain and the monocarboxylic acid with cyclic structure is substrate, such as utilize 2- heptan Olefin(e) acid (2-heptenate), naphthenic acid (cyclohexanecarboxylic acid) generation 2- heptene acyl-CoA and ring Own formyl-CoA.Therefore, malonyl coenzyme A synzyme of the present invention can widely adapt to short chain or middle chain, dicarboxylic acids or Monocarboxylic acid substrate, and it is catalyzed its corresponding acyl-CoA product of formation.
Beneficial effect
Present invention firstly discloses prepare 2- enoyl CoAs in heptan and hexamethylene formyl by middle short chain acyl CoA synthase The technical scheme of coacetylase, overcome be only capable of thinking in the prior art malonyl coenzyme A synzyme can only with 1,3- dicarboxylic acids or its Salt is catalyzed them and forms corresponding acyl-CoA products as substrate, such as malonyl CoA, methylmalonyl CoA, ethyl the third two Acyl CoA, methoxyl group malonyl CoA, hydroxyl malonyl CoA, and can not possibly be catalyzed inclined using monocarboxylic acid as the technology of the reaction of substrate See, widened the application of the enzyme.
Brief description of the drawings
Fig. 1 is the two-step reaction mechanism of malonyl coenzyme A synzyme;
Fig. 2 is N- ends His6The SDS-PAGE detection figures of the malonyl coenzyme A synzyme of-tag fusion;
In figure:T, S are LB culture mediums, 15 DEG C, the total protein of expressive host bacterium under 0.5mM IPTG inductive conditions respectively With supernatant (control);
Ft is Flow-through effluxes;
15 be the eluent under 15mM imidazole concentrations;
150 be the eluent under 150mM imidazole concentrations;
500 be the eluent under 500mM imidazole concentrations;
M is protein molecular weight standard (PageRuler Broad Range Unstained Protein Ladeder);
Fig. 3 is test group and the HPLC-MS testing results of control group;
In figure:1) control group, 2) test group.
Embodiment
Following embodiment facilitates a better understanding of the present invention, but does not limit the present invention.
Biological sample is originated
Streptomyces coelicolor ZM12 is existing known bacterial strain, purchased from synthetic biology key lab of the Chinese Academy of Sciences;
Coacetylase is purchased from Sigma-Aldrich (China) company.
Equipment source
Ultrafiltration in embodiment is usedUltra-0.5 ultrafiltration centrifugal filter devices;
Detection couples MS (ESI mass spectrometry, electrospray ionization mass spectrometry) using HPLC, by analyzing ultrafiltration A small amount of sample after removing protein, it is determined that and checking the retention time (retention time) of acyl-CoA product, ultraviolet absorption peak Shape (UV absorption peak shape) and molecular weight (molecular weight);
Purifying uses preparation HPLC chromatographic column;
Dry using MAXI dry lyo vacuum concentrations/freeze-drying system (Heto-Holten, Denmark).
Embodiment 1
1. the structure of expression vector and engineering bacteria
Use primer matBF and matBR, using streptomyces coelicolor genomic DNA as template, PCR amplifying target genes matB.PCR primer after purified is connected to by identical digestion processing simultaneously using being purified again after NdeI and XhoI double digestions And dephosphorylized contain N- ends His6The expression vector pET-28a (+) of-label.Plasmid pET-28a (+)-matB of formation Host Strains E.coli BL21 (DE3) are transformed into after being verified through DNA sequencing is used for protein expression.
matBF:5’-TCGATTGCACATATGTCCTCTCTCTTCCCGGCCCTCT-3’
matBR:5’-ATCGGATAGCTCGAGTCAGTCACGGTTCAGCGCCCGCTT-3’
2. the expression and purifying of malonyl coenzyme A synzyme
It is used for the LB culture mediums for being inoculated with 37 DEG C of pre-temperatures of addition 50mg/l kanamycins after starting culture growth overnight.When OD600When=0.4,15 DEG C of cooling culture mediums are expressed with 0.5mM isopropyl-β-D-thiogalactosides (IPTG) inducible protein. After 16h, by the way that cell is harvested by centrifugation, being resuspended in lysis buffer, (quality percent by volume is 10% glycerine, g/ml, 0.5M NaCl, 100mMHEPESpH7.5) in, it is ultrasonically treated, and 16,000g centrifugation 45min are to remove cell fragment.Acellular cracking Nickel-NTA the posts that liquid is balanced by using lysis buffer.Wash the post with the lysis buffer containing 15mM imidazoles, and with containing The lysis buffer elution albumen of 150mM imidazoles.
Polyacrylamide gel electrophoresis (SDS-PAGE) is detected, as a result as shown in Fig. 2 destination protein is N- ends His6The malonyl coenzyme A synzyme of-tag fusion, molecular weight 52.8kDa.Use Thermo Scientific Nanodrop 1000 determine final protein concentration for 62.7 μM.
The in vitro test of 2- enoyl CoA in the heptan biosynthesis of embodiment 2
The reaction system of malonyl coenzyme A synzyme as shown in table 2, adds each component successively in order, in 22 DEG C of reactions Under the conditions of constant temperature stand overnight.
Table 2
The reaction system of control group such as test group, difference is that malonyl coenzyme A synzyme first passes through 96 DEG C of heat in advance Inactivation processing 10min.Response sample passes throughUltra-0.5 Centrifugal Filter Devices ultrafiltration is removed It is used for HPLC-MS (high-resolution positive-ESI mass spectrometry, high-resolution positive electricity after albumen Spraying MALDI-MS) to analyze, HPLC methods are shown in Table 3.
Table 3 is used for the HPLC method [solvent orange 2 As of Mass Spectrometer Method:10mM ammonium acetates (NH4OAc) the aqueous solution, solvent B:Acetonitrile (CH3CN), flow velocity=1ml/min, in 260nm detection reaction products (adenine, CoA groups)]
Table 3
Use Prominence Modular HPLC (Japanese Shimadzu Corporation) and Dikma reverse-phase chromatographic columns (Agilent 1200, ZORBAX Eclipse XDB-C18,250 × 4.6mm, 5 μm), couple LTQ-Obitrap Velos Pro mass spectrographs (Thermo Scientific companies), sample is analyzed by HPLC-HR-ESIMS, and mass-to-charge ratio (m/z) is swept in the positive-ion mode Scope 110-1200 is retouched, testing result is as shown in Figure 3;
As a result show, test group 2) occur newly-increased product peak A (2- enoyl CoAs in heptan) in retention time 16.75min, Its m/z observation is 878.1981 (theoretical values 878.19565, error only has 2.8ppm).Meanwhile, test group 2) and control 1) group observes substrate peak B (CoA, m/z observation 766.4, theoretical value 766.1).
Amplification prepares the reaction system of 2- enoyl CoAs in heptan as it was previously stated, difference is:Reacted system is passed through Enzyme is inactivated, ultrafiltration removing protein, then separates 2- enoyl CoA in heptan products with preparation HPLC, dense using MAXI dry lyo vacuum Contracting/freeze-drying system (Heto-Holten, Denmark) vacuum freezedrying, the encapsulation of gained chromatographically pure 2- enoyl CoAs in heptan freeze-dried powder - 80 DEG C of preservations are put in ampoule bottle.
The in vitro test of the hexamethylene methylacyl coenzyme A biosynthesis of embodiment 3
Reaction system is in addition to substrate need to replace with final concentration 16mM naphthenic acids (NaOH adjusts pH to 7.2), remaining component It is identical with table 3 with reaction condition.Follow-up preparation process is with reference to embodiment 2, isolated 10mg hexamethylenes methylacyl coenzyme A sterlings.Inspection Survey result as follows:
1H-NMR (nuclear magnetic resonance) data (300MHz, D2O):δ:0.56(s,H-10'),0.69(s,H-11'),1.55(m, ), H-5 2.26 (t, J=6.9Hz, H-4'), 2.40 (t, J=6.9, H-6), 2.55 (t, J=8.1Hz, H-4), 2.75 (t, J= 6.0Hz, H-1'), 3.11 (t, J=6.0, H-3and H-7), 3.27 (m, H-2'and H-5'), 3.35 (m, H-5 "), 3.64 (m,H-5”),3.82(s,H-7'),4.04(br s,CH2- 9'), 4.39 (br s, H-4 "), 5.98 (d, J=7.5Hz, H- 1”),8.08(s,adenine-CH),8.35(s,adenine-CH).ESI-MS mass spectrometric datas [negative ion mode (negative Ion mode), m/z]:876.0[M-H]-, 437.5 [M-2H]2-
Comparative example
According to coming from Rhodopseudomonas palustris (Rhodopseudomonas disclosed in U.S. Crosby in 2012 et al. PalustrisCGA009 the preparation method of malonyl coenzyme A synzyme) prepares malonyl coenzyme A synzyme, using embodiment 2 and embodiment 3 in method prepare 2- enoyl CoAs in heptan and hexamethylene methylacyl coenzyme A.
After testing, 2- enoyl CoAs in heptan and hexamethylene methylacyl coenzyme A generation are not found in reaction system.Marsh is red false single The malonyl coenzyme A synzyme of born of the same parents bacterium can not be catalyzed 2- heptenoic acids, naphthenic acid it is such in short unsaturated straight chain or with ring The monocarboxylic acid of shape structure is changed into the reaction of corresponding acyl-CoA.
Described above is only one embodiment of the present of invention, it is noted that for those skilled in the art For, under the premise without departing from the principles of the invention, some improvements and modifications can also be made, these improvements and modifications should also be regarded For protection scope of the present invention.
SEQUENCE LISTING
<110>Liu, surpasses
<120>A kind of application of middle short chain acyl CoA synthase
<160> 4
<170> PatentIn version 3.5
<210> 1
<211> 1458
<212> DNA
<213> Streptomyces coelicolor
<400> 1
atgtcctctc tcttcccggc cctctccccg gccccgaccg gcgccccggc cgaccggccc 60
gcgctgcggt tcggcgagcg ctccctgacc tacgcggaac tcgccgcggc ggcgggcgcc 120
acggccgggc ggatcggcgg cgccggccgg gtcgcggtct gggccacccc ggcgatggag 180
accggcgtcg ccgtggtggc ggcgctgctg gccggggtcg ccgccgtacc gctcaacccg 240
aagtccggcg acaaggaact cgcgcacatc ctctccgaca gcgcgccctc gctcgtcctg 300
gcgcccccgg acgcggaact cccgcccgcc ctcggggccc tggagcgcgt cgacgtcgac 360
gtgcgggccc gcggggcggt ccccgaggac ggtgccgacg acggcgaccc cgcgctcgtc 420
gtctacacct cgggcaccac gggaccgccg aagggcgccg tcatcccccg gcgggcgctc 480
gccacgaccc tggacgcgct cgccgacgcg tggcagtgga ccggcgagga cgtgctggtg 540
caggggctgc cgctgttcca cgtgcacggg ctggtcctcg gcatcctcgg cccgctgcgc 600
cggggcgggt ccgtgcggca cctgggccgg ttctccaccg agggtgcggc gcgggagctg 660
aacgacggcg cgaccatgct gttcggggtg ccgacgatgt accaccggat cgccgagacg 720
ctccccgccg acccggagct ggcgaaggcg ctcgccgggg cccggctgct ggtgtcgggg 780
tcggccgcgc tgccggtgca cgaccacgag cgcatcgccg ccgccaccgg gcgccgggtg 840
atcgagcggt acggcatgac cgagacgctg atgaacacca gcgtgcgcgc cgacggcgag 900
ccgcgcgccg ggacggtggg cgtgccgctg cccggtgtgg agctgcggct ggtggaggag 960
gacggcacgc cgatcgcggc gctcgacggg gagagcgtcg gcgagatcca ggttcgcggc 1020
ccgaacctgt tcaccgagta cctgaaccgc cccgacgcca ccgccgccgc cttcaccgag 1080
gacggcttct tccgcaccgg cgacatggcg gtgcgcgacc ccgacggcta tgtccgcatc 1140
gtcggccgca aggccaccga cctgatcaag agcggcggtt acaagatcgg ggccggggag 1200
atcgagaacg ccctgctcga acacccggag gtccgggagg ccgccgtcac cggcgaaccc 1260
gaccccgacc tcggggaacg gatcgtggcc tggatcgtcc cggccgaccc cgccgccccg 1320
cccgccctcg gcacgctggc cgaccacgtc gccgcccggc tcgccccgca caagcggccg 1380
cgcgtcgtcc ggtacctcga cgcggtgccc cgcaacgaca tggggaagat catgaagcgg 1440
gcgctgaacc gtgactga 1458
<210> 2
<211> 485
<212> PRT
<213> Streptomyces coelicolor
<400> 2
Met Ser Ser Leu Phe Pro Ala Leu Ser Pro Ala Pro Thr Gly Ala Pro
1 5 10 15
Ala Asp Arg Pro Ala Leu Arg Phe Gly Glu Arg Ser Leu Thr Tyr Ala
20 25 30
Glu Leu Ala Ala Ala Ala Gly Ala Thr Ala Gly Arg Ile Gly Gly Ala
35 40 45
Gly Arg Val Ala Val Trp Ala Thr Pro Ala Met Glu Thr Gly Val Ala
50 55 60
Val Val Ala Ala Leu Leu Ala Gly Val Ala Ala Val Pro Leu Asn Pro
65 70 75 80
Lys Ser Gly Asp Lys Glu Leu Ala His Ile Leu Ser Asp Ser Ala Pro
85 90 95
Ser Leu Val Leu Ala Pro Pro Asp Ala Glu Leu Pro Pro Ala Leu Gly
100 105 110
Ala Leu Glu Arg Val Asp Val Asp Val Arg Ala Arg Gly Ala Val Pro
115 120 125
Glu Asp Gly Ala Asp Asp Gly Asp Pro Ala Leu Val Val Tyr Thr Ser
130 135 140
Gly Thr Thr Gly Pro Pro Lys Gly Ala Val Ile Pro Arg Arg Ala Leu
145 150 155 160
Ala Thr Thr Leu Asp Ala Leu Ala Asp Ala Trp Gln Trp Thr Gly Glu
165 170 175
Asp Val Leu Val Gln Gly Leu Pro Leu Phe His Val His Gly Leu Val
180 185 190
Leu Gly Ile Leu Gly Pro Leu Arg Arg Gly Gly Ser Val Arg His Leu
195 200 205
Gly Arg Phe Ser Thr Glu Gly Ala Ala Arg Glu Leu Asn Asp Gly Ala
210 215 220
Thr Met Leu Phe Gly Val Pro Thr Met Tyr His Arg Ile Ala Glu Thr
225 230 235 240
Leu Pro Ala Asp Pro Glu Leu Ala Lys Ala Leu Ala Gly Ala Arg Leu
245 250 255
Leu Val Ser Gly Ser Ala Ala Leu Pro Val His Asp His Glu Arg Ile
260 265 270
Ala Ala Ala Thr Gly Arg Arg Val Ile Glu Arg Tyr Gly Met Thr Glu
275 280 285
Thr Leu Met Asn Thr Ser Val Arg Ala Asp Gly Glu Pro Arg Ala Gly
290 295 300
Thr Val Gly Val Pro Leu Pro Gly Val Glu Leu Arg Leu Val Glu Glu
305 310 315 320
Asp Gly Thr Pro Ile Ala Ala Leu Asp Gly Glu Ser Val Gly Glu Ile
325 330 335
Gln Val Arg Gly Pro Asn Leu Phe Thr Glu Tyr Leu Asn Arg Pro Asp
340 345 350
Ala Thr Ala Ala Ala Phe Thr Glu Asp Gly Phe Phe Arg Thr Gly Asp
355 360 365
Met Ala Val Arg Asp Pro Asp Gly Tyr Val Arg Ile Val Gly Arg Lys
370 375 380
Ala Thr Asp Leu Ile Lys Ser Gly Gly Tyr Lys Ile Gly Ala Gly Glu
385 390 395 400
Ile Glu Asn Ala Leu Leu Glu His Pro Glu Val Arg Glu Ala Ala Val
405 410 415
Thr Gly Glu Pro Asp Pro Asp Leu Gly Glu Arg Ile Val Ala Trp Ile
420 425 430
Val Pro Ala Asp Pro Ala Ala Pro Pro Ala Leu Gly Thr Leu Ala Asp
435 440 445
His Val Ala Ala Arg Leu Ala Pro His Lys Arg Pro Arg Val Val Arg
450 455 460
Tyr Leu Asp Ala Val Pro Arg Asn Asp Met Gly Lys Ile Met Lys Arg
465 470 475 480
Ala Leu Asn Arg Asp
485
<210> 3
<211> 37
<212> DNA
<213>It is artificial synthesized
<400> 3
tcgattgcac atatgtcctc tctcttcccg gccctct 37
<210> 4
<211> 39
<212> DNA
<213>It is artificial synthesized
<400> 4
atcggatagc tcgagtcagt cacggttcag cgcccgctt 39

Claims (6)

1. a kind of application of middle short chain acyl CoA synthase in 2- enoyl CoAs in heptan, hexamethylene methylacyl coenzyme A is prepared.
2. application as claimed in claim 1, it is characterised in that step is as follows:
(1) middle short chain acyl CoA synthase of the amino acid sequence as shown in SEQ ID NO.2 is prepared;
(2) it is formulated as follows reaction system using middle short chain acyl CoA synthase made from step (1):
100mM 4- hydroxyethyl piperazineethanesulfonic acids;The glycerine of quality percent by volume 10%, unit g/ml;100mM magnesium chlorides;15~ 50mM2- heptenoic acids, the sodium salt of 2- heptenoic acids, the sodium salt of naphthenic acid or naphthenic acid;20mM atriphos;5mM is auxiliary Enzyme A;The malonyl coenzyme A synzyme of 10 μM of purifying;pH 7.5;
(3) above-mentioned reaction system reacts 7.5~10h under the conditions of 20~24 DEG C, and terminating reaction removes zymoprotein, purified, does It is dry, produce.
3. application as claimed in claim 2, it is characterised in that in the step (1), prepare amino acid sequence such as SEQ ID Middle short chain acyl CoA synthase shown in NO.2 is adopted with the following method:
The malonyl coenzyme A synthase gene matB for expanding streptomyces coelicolor is reacted through PCR using primer matBF and matBR, Then by construction of expression vector and engineering bacteria, induced expression, then through Ni-NTA ni-sepharose purification malonyl coenzyme A synzyme, Produce;
The nucleotide sequence of the primer matBF and matBR is as follows:
matBF:5’-TCGATTGCACATATGTCCTCTCTCTTCCCGGCCCTCT-3’
matBR:5’-ATCGGATAGCTCGAGTCAGTCACGGTTCAGCGCCCGCTT-3’。
4. application as claimed in claim 2, it is characterised in that in the step (3), it is using ultrafiltration centrifugation to remove zymoprotein Filtering is removed.
5. application as claimed in claim 2, it is characterised in that in the step (3), described purifying is to use HPLC chromatogram Purified.
6. application as claimed in claim 2, it is characterised in that in the step (3), the drying is to be done using vacuum refrigeration Drying method is carried out.
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Cited By (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN108504705A (en) * 2017-12-26 2018-09-07 北京利德曼生化股份有限公司 The biochemistry of palmitoyl coenzyme A synthesizes and purification process
CN112410389A (en) * 2019-08-23 2021-02-26 中国科学院微生物研究所 Application of branched-chain alpha-ketoacid dehydrogenase complex in preparation of malonyl-CoA

Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN102061299A (en) * 2010-11-17 2011-05-18 中国科学院上海有机化学研究所 Biosynthetic gene cluster of phoslactomycins
CN103725652A (en) * 2013-12-25 2014-04-16 无锡新和源发酵技术研究院有限公司 Acyl-coenzyme A synthetase and application thereof
WO2015026944A1 (en) * 2013-08-21 2015-02-26 The Regents Of The University Of California Methods for the site-selective introduction of halogen into natural products
CN105916991A (en) * 2013-11-01 2016-08-31 康纳根有限公司 Methods of using acyl-CoA synthetase for biosynthetic production of acyl-CoAs

Patent Citations (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN102061299A (en) * 2010-11-17 2011-05-18 中国科学院上海有机化学研究所 Biosynthetic gene cluster of phoslactomycins
WO2015026944A1 (en) * 2013-08-21 2015-02-26 The Regents Of The University Of California Methods for the site-selective introduction of halogen into natural products
CN105916991A (en) * 2013-11-01 2016-08-31 康纳根有限公司 Methods of using acyl-CoA synthetase for biosynthetic production of acyl-CoAs
CN103725652A (en) * 2013-12-25 2014-04-16 无锡新和源发酵技术研究院有限公司 Acyl-coenzyme A synthetase and application thereof

Non-Patent Citations (5)

* Cited by examiner, † Cited by third party
Title
AMANDA J.HUGHES ET AL.: "Enzymatic Extender Unit Generation for in Vitro Polyketide Synthase Reactions:Structural and Functional Showcasing of Streptomyces coelicolor MatB", 《CHEMISTRY & BIOLOGY》 *
LIU C ET AL.: "Malonyl-CoA pathway:a promising route for 3-hydroxypropionate biosynthesis", 《CRITICAL REVIEWS IN BIOTECHNOLOGY》 *
无作者: "MULTISPECIES:acyl-CoA synthetase [Streptomyces]", 《GENBANK》 *
曹山等: "毛果杨中链酰基辅酶A合成酶的克隆及酶学分析", 《北京林业大学学报》 *
董爽爽等: "热稳定酯酰辅酶A合成酶的异源表达及酶学特性", 《微生物学报》 *

Cited By (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN108504705A (en) * 2017-12-26 2018-09-07 北京利德曼生化股份有限公司 The biochemistry of palmitoyl coenzyme A synthesizes and purification process
CN112410389A (en) * 2019-08-23 2021-02-26 中国科学院微生物研究所 Application of branched-chain alpha-ketoacid dehydrogenase complex in preparation of malonyl-CoA
WO2021036901A1 (en) * 2019-08-23 2021-03-04 中国科学院微生物研究所 APPLICATION OF BRANCHED-CHAIN α-KETOACID DEHYDROGENASE COMPLEX IN PREPARATION OF MALONYL COENZYME A

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