Embodiment
Be intended to further illustrate the present invention below in conjunction with embodiment, and unrestricted the present invention.
Embodiment 1: the Isolation and ldentification that Oil Tea Anthracnose is former
The separation and ientification of pathogenic bacteria
The sick leaf of oil tea picks up from Hunan, Jiangxi, Guangxi, Hainan, Fujian, Hubei and Chongqing.Adopt conventional separation technique, be good for intersection tissue from sick leaf disease and be separated, after pure growth slant culture, 4 DEG C of Refrigerator stores are for subsequent use.
Pathogens is observed
Observe colony characteristics, optical microphotograph Microscopic observation mycelia feature, conidium form, and measure its size.
Tieback is tested
To national Approved variety ' Hua Xin ' oil tea plants leaf, with 75% ethanol surface sterilization process, fine needle dips puncture Camellia Leaves after isolate spore suspension, compare (CK) with aqua sterilisa process, in vitro observes Occurrence and development of disease situation, and carries out germ to inoculation sequela leaf and be separated.
The polygenic pcr amplification of germ and sequential analysis
The extraction of pathogenic bacteria DNA
The extraction of pathogenic bacteria DNA.Isolated strains is inoculated on PDA flat board and activates, in 28 DEG C of incubators after dark culturing 6d, with the spoon of sterilizing, mycelia is scraped, take 0.5g in mortar, add 1mL lysate, 3/10 volume quartz sand, proceed in 1.5mL EP pipe after grinding fully, 65 DEG C of water-bath 10min, then add 600 μ L7.5mol/L NaCl solution, the centrifugal 5min of 13000r/min after ice bath 8min; Get 600 μ L supernatant liquors in a new EP pipe, add 400 μ L chloroforms: primary isoamyl alcohol (24:1), mixing; Get 500 μ L supernatants after stratification to another new EP pipe, add the dehydrated alcohol of 0.1 times of volume NaAc and 2 times volume, collect DNA after the centrifugal 8min of 14000g, wash DNA2 time with 70% ethanol; After ethanol volatilization, with 0.1 × TE dissolving DNA ,-20 DEG C of preservations.
Gene Selection and object fragment amplification and order-checking
The bacterial strain that we obtain all separation screenings, selects rrna transcribed spacer (ITS), glyceraldehyde 3-phosphate dehydro-genase gene (GAPDH) and Calmodulin gene (CAL) to carry out increasing and checks order.Corresponding pcr amplification primer is in table 1.PCR primer entrusts the order-checking of Shanghai Bo Shang Bioisystech Co., Ltd.
This test of table 1 the primer and annealing temperature list
Bacterial strain polygenic system is grown tree and is built
By 3 genes of each bacterial strain that order-checking obtains, each gene through Clustal W software comparison and after manual correction joins end to end respectively according to the order of ITS-CAL-GAPDH, and download in GenBank simultaneously containing ITS, carry out homology analysis after 3 genes also join end to end according to the order of ITS-CAL-GAPDH, build the N-J phylogenetic tree of all bacterial strains 3 assortments of genes with software MEGA4.0.
Results and analysis
Pathogenicbacteria separation and Pathogenicity
From Hunan, Jiangxi, Guangxi, Hainan, Fujian, Hubei and 7 provinces such as Chongqing oil tea producing region is separated, purifying obtains the strain of morphological specificity doubtful anthrax pathogenic bacteria 269, tested by tieback, we find that 35 fungal strains can cause the symptom of anthrax.These scabs are organized and again carries out pathogenicbacteria separation, obtain the bacterium colony consistent with former inoculating strain morphological specificity and conidium; Sterilized water (CK) process does not all find scab, is not separated to germ yet.Can determine thus, this 35 fungal strain that we are separated is the pathogenic bacteria causing Oil Tea Anthracnose.35 fungal strains, according to morphological feature, can be divided into 7 classes, and we represent with FA, FB, FC, FD, FE, FF, FG respectively.
(1) FF class bacterial strain
Conidium is straight, cylindric or fusiform, and the blunt circle in two ends is smooth, colourless, 13-17 μm (Fig. 1, B).
On PDA substratum, the speed of growth, 11.3-14.3mm/day, bacterium colony is light grey to Dark grey, circular, rule, and edge color is slightly shallow; Back side black, forms black concentricity (Fig. 1, C, D) sometimes.Conidium is straight, cylindric, the blunt circle in two ends, and monospore is smooth, colourless.
Bacterial strain research and host: strains separation is from the sick leaf of oil tea.Oil tea causes oval light brown pit, the sick strong water stain shape (Fig. 1, A) of intersection.Fig. 1, A are the anthrax scabs caused on oil tea excised leaf.
(2) FC class bacterial strain
On bacterium colony PDA substratum, the speed of growth, 11.2-13.3mm/day, bacterium colony is light grey, fine hair shape, neat in edge; The back side outwards gradually becomes Vandyke brown (Fig. 2, C, D) by thin rice gruel look from center.Conidium monospore, directly, cylindric, the blunt circle in two ends, colourless, smooth, 12-15 μm (Fig. 2, B).
Bacterial strain research and host: strains separation, from the sick leaf of oil tea, causes the light brown scab (Fig. 2, A) arriving brown ellipse or strip at blade edge or top.Fig. 2, A are the anthrax scabs caused on oil tea excised leaf.
(3) FK class bacterial strain
Conidium monospore, smooth, cylindric, base portion is truncate, the blunt circle in top, and base portion is wider, gradually thin to top, in taper.
On PDA, speed of growth 10.1-11.7mm/day, bacterium colony fine hair shape, neat in edge; Slightly be with yellow (Fig. 3, C, D) conidium monospore, directly, cylindric, colourless, 15-19 μm.Base portion is truncate, the blunt circle (Fig. 3, B) in top.
Bacterial strain research and host: strains separation, from the sick leaf of oil tea, blade causes the nearly oval scab (Fig. 3, A) of Vandyke brown.Fig. 3, A are the anthrax scabs caused on oil tea excised leaf.
(4) FG class bacterial strain
Conidium is straight, sometimes at middle part around contracting, the blunt circle in two ends, colourless 11-18 μm.
On PDA substratum, speed of growth 9.7-12.7mm/day, bacterium colony is various, light grey to Dark grey, fine hair shape, neat in edge; Back side thin rice gruel look to Vandyke brown, peripheral zone point yellow (Fig. 4, C, D).Conidium orange, conidium is cylindric, the blunt circle in two ends, smooth, has oily ball (Fig. 4, B).
Bacterial strain research and host: strains separation is from the sick leaf of oil tea, and hygrophanous subcircular scab, sink gradually, later stage browning look, has dispersion stain (piling blackening by conidium) (Fig. 4, A).Fig. 4, A are the anthrax scabs caused on oil tea excised leaf.
(5) FA class bacterial strain
The slightly narrow corynebacterium in conidium oblong or one end, colourless, unit cell, yardstick is 13-17 μm (Fig. 5, B).
On PDA substratum, speed of growth 9.9-12.9mm/day, bacterium colony grey, aerial hyphae is rare, is close to substratum, neat in edge, back side black slightly green (Fig. 5, C, D).Conidium is straight, cylindric or fusiform, the blunt circle in two ends, smooth, colourless (Fig. 5, B).
Bacterial strain research and host: strains separation is from the sick leaf of oil tea, and scab tawny on leaf, edge sorrel, has orange viscous substance above, i.e. germ conidium (Fig. 5, A).Produce sorrel fusiformis streak, rear expansion browning after the morbidity of children's basal part of stem, slightly depression, scab has orange goo.Fig. 5, A are the anthrax scabs caused on oil tea excised leaf.
(6) FB class bacterial strain
Conidium, monospore, colourless, smooth, two terminal circle length 13-19 μm (Fig. 6, B).
On PDA substratum, speed of growth 9.9-16.4mm/day, bacteria colony white is to grey, flat, neat in edge; In the middle of the back side, black outwards somewhat light yellow (Fig. 6, C, D).
Bacterial strain research and host: strains separation, in the sick leaf of oil tea, produces brown circle, oval scab (Fig. 6, A) at blade proximal edge place or nearly blade tip place.Fig. 6, A are the anthrax scabs caused on oil tea excised leaf.
(7) FD class bacterial strain
Conidium, monospore, colourless, smooth, two terminal circle length 12-18 μm (Fig. 7, B).
On PDA substratum, growth is comparatively slow, 2.4-5.7mm/day bacterium colony fine hair shape, grey, and circular, the back side is light brown to black (Fig. 7, C, D).
Bacterial strain research and host: strains separation, in the sick leaf of oil tea, forms light brown subcircular or bar shaped scab (Fig. 7, A).Fig. 7, A are the anthrax scabs caused on oil tea excised leaf.
Bacterial strain polygenic system developmental analysis
35 pathogenic strains belong to other kind of bacterial strain with the anthrax downloaded from Genbank and (splice ITS, CAL and GAPDH3 gene order) build phylogenetic tree (Fig. 8) display, 35 bacterial strain copolymerization are 7 branches: wherein, Ith has 10 FF class bacterial strains and all C.fructicola participating in analyzing to gather is one, IIth has 1 FD class bacterial strain and C.alienum to gather is one, but supporting rate is not high, title is fixed tentatively as Colletotrichum sp.2, IIIth has 10 FC class bacterial strains and C.siamense to gather is one, IVth has 5 FG class bacterial strains and C.gloeosporioides to gather is one, Vth has 4 FB class bacterial strains not gather with other bacterial strain is one, suspected of a novel species, title is fixed tentatively as Colletotrichum sp.1, VIth has 4 FA class bacterial strains and Glomerella cingulata to gather is one, VIIth has 1 FE class bacterial strain and C.karstii to gather is one.In polygenic system tree, 7 branch's bacterial strains can belong to other kinds with anthrax and well distinguish.According to the morphological feature of each bacterial strain, consult Fungal identification handbook, tree is grown in conjunction with polygenic system, we identify that be separated to pathogenic bacteria has 6 oil tea New Records: C.fructicola, C.siamense, C.karstii, Colletotrichum sp.1, Colletotrichum sp.2, Glomerellacingulata and 1 report kind: C.gloeosporioides.
Embodiment 2: antagonistic bacterium is separated, screening
Parting material: from Liuyang oil tea Demonstration Base, the blade choosing C. olelfera healthy plant carries out the separation of endophyte.
For examination endogenetic bacteria: obtained by susceptible oil tea blade separation screening.
For examination pathogenic bacteria: 7 kinds of oily Anthracnose Pathogen bacterium, embodiment 1 is separated, identifies acquisition.
For examination substratum:
PDA: glucose 20.0g, potato 200.0g, agar 18.0g, distilled water 1000ml;
NB: extractum carnis 3.0g, peptone 10.0g, sodium-chlor 5g, distilled water 1000ml, pH7.2-7.4.
The isolation and purification of endogenetic bacteria:
Random selecting 20 tea oil trees from the oil tea demonstration test base of liuyang hunan, every tree gets 10 oil tea blades, loads in bag, mark time, place.Suitable healthy oil tealeaves tissue is chosen after the oil tea seedling leaf tap water adopted back is clean, cut into the bar shaped of 3cm, 15s is soaked in 75% ethanol, then aseptic water washing 30s is used, repeat flushing 3 times, being finally cut into size is the square of about 6mm, is placed in PDA substratum under aseptic technique, last numbering one by one also cultivates 3-7d, in order to purifying in incubator.
When the microbial culture be separated is after certain hour, a little with inoculating needle picking, and aseptically adopt method of scoring to be inoculated on PDA substratum, be placed in incubator and cultivate, to reach the object of purifying.
Dull and stereotyped face-off method screening:
Adopting dull and stereotyped face-off method to screen being separated raw Antagonistic Fungi in the oil tea seedling that obtains, obtaining resistant strain.Be that the Oil Tea Anthracnose pathogenic bacteria bacterium cake of 6mm is aseptically placed in the dull and stereotyped central authorities of PDA by diameter, then tested bacteria is dipped with toothpick, equidistant point connects 4 kinds of endogenetic bacterias, be placed in incubator 28 DEG C cultivation, after 5 days observed and recorded inhibition zone size and with or without, repeat 3 times, 6 bacterial strains selecting fungistatic effect best carry out multiple sieve.
The mensuration of interior raw antagonistic strain antimicrobial spectrum:
Dull and stereotyped face-off method is adopted to measure antagonistic strain to the antagonistic action of 7 kinds of pathogenic bacterias: the pathogenic bacteria that 7 kinds activate is cut into the square of 0.5cm, the dull and stereotyped central authorities of PDA are seeded in respectively under aseptic condition, surrounding inoculates the antagonistic bacterium of separation and purification apart from pathogenic bacteria 2cm place, every ware connects four kinds, often process and repeat for 3 times, be placed in dark culturing in incubator, every day observes, and measures the size of inhibition zone.
Results and analysis
The isolation and purification of Endophytic antagonistic bacteria
According to single colonial morphology, size, color, smooth surface degree, from the bacterium that all separation obtain, separation, purifying obtain 68 strain endogenetic bacterias (see table 2), and strain number is followed successively by No. 1-No. 70 (No. 21 and No. 53 is mistake numbering).As can be seen from the table, isolate host tree totally 5 strains of effective antagonistic bacterium, account for 25% of sum, separation of bacterial quantity is lower, and bacterial number obvious difference, No. 4 tea oil trees have isolated 32 strain bacteriums, and No. 2 tea oil trees have only been separated to 1 strain bacterium.Illustrate that the tea oil tree surely having grown Endophytic antagonistic bacteria in current camellia oleifera lam only accounts for sub-fraction, do not have Endophytic antagonistic bacteria in most tea oil tree, this may be one of major reason of Oil Tea Anthracnose generation.
The separation of endogenetic bacteria in table 2 Camellia Leaves
Interior raw antagonistic strain antimicrobial spectrum measures
With 7 kinds of Oil Tea Anthracnose bacterium C.fructicola, C.siamense, C.karstii, C.gloeoporioide, Glomerellacingulata, Colletotrichum sp.1 and Colletotrichum sp.2 various pathogenic bacteria for indicator, dull and stereotyped face-off method is adopted to measure the bacteriostatic action of 68 bacterial strains (see Fig. 9-15; Figure 16).6 antagonistic bacteriums such as can be seen from the figure No. 5, No. 8, No. 38, No. 48, No. 49, No. 65 all have stronger restraining effect to all 7 kinds of germs, account for 8.82% of bacterial strain sum; Wherein No. 49 bacterium antagonistic activities are the strongest, are all greater than 7mm to the antibacterial bandwidth of 7 kinds of Oil Tea Anthracnose bacterium, illustrate that this bacterium can be used for control by these 7 kinds of microbial Oil Tea Anthracnoses of cause of disease.
The restraining effect that embodiment 3:49 antagonistic bacterium is sprouted oil tea 7 kinds of anthrax protospores
Adopt slide glass sessile drop method.After Oil Tea Anthracnose germ is cultivated 10d in (22 DEG C) incubator on PDA flat board, transfer to transfering loop picking sorus and fill in the test tube of aqua sterilisa, after concussion shakes up, be made into spore suspension (5 × 10
8individual/mL), for subsequent use.Get 100uL spore suspension, mix respectively with 100uL fermenation raw liquid with by dilution 10 times, the fermented liquid of 100 times and 100uL ferment filtrate, be added drop-wise on depression slide, to drip sterilized water for contrast.Often process repetition 3 times, be placed in 28 DEG C of incubators and cultivate, microscopy spore germination situation after 48h, calculate spore germination rate.As seen from the results in Table 3, the growth of fermenation raw liquid to 7 kinds of conidial sproutings of anthrax bacteria and germ tube of No. 49 bacterial strains has obvious restraining effect, wherein to the inhibiting rate of spore germination between 95.8%-95.2%, fermented liquid is diluted rear inhibition to be reduced gradually.No. 49 strain fermentation filtrates are also fairly obvious to the inhibition of spore germination, and inhibition of germination is between 89.7%-90.3%, and result shows, bacterial strain may create in fermentation culture process has inhibiting meta-bolites to anthrax bacteria.
Table 3 endophytic bacterial controlled effect nutrient solution is on the impact of anthrax bacteria conidia germination
Embodiment 4:49 antagonistic bacterium Analysis and Identification
Morphological Identification
Colonial morphology: No. 49 bacterial strains are on culture medium flat plate, and 30 DEG C of cultivations, bacterium colony surface folding, bacterium colony propagation rate is very fast, and be creamy white, initial stage edge is wavy, and central uplift is opaque, not chromogenesis (see Figure 17).
Thalli morphology: it is shaft-like for observing thalline under opticmicroscope, Gram-positive, produces gemma, middle life, gemma ellipse (see Figure 17).
Genomic dna test kit (Beijing hundred Tyke Bioisystech Co., Ltd) extracts.16S rDNA universal primer designs: 16SL:5'AGAGTTTGATCCTGGCTCAG3', 16SR:5'ACGGCTACCTTGTTACGACT3'.PCR reaction system (50 μ L): DNA1.5 μ g, primer each 1.5 μ L, dNTP4 μ L, 10 × Buffer5.0 μ L, Taq enzyme 0.5 μ L, ddH2O36 μ L.Amplification program is 95 DEG C of denaturation 4min, 30 circulations (94 DEG C of 30s, 55 DEG C of 30s, 72 DEG C of 90s), and 72 DEG C extend 10min.4 DEG C of preservations.PCR order-checking is completed by Beijing Bo Maide biotechnology limited liability company.Bacterial strain 16SrDNA sequence is carried out Blast compare of analysis in http://www.ncbi.nlm.nlh.gov website, carries out highest homology with the bacterial strain of 16S rDNA known in GenBank and compare.
Searched for by Blast homology, find that the Bacillus methylotrophicus homology in No. 49 bacterial strains and Genbank is 100%, combining form feature, we identify that No. 49 Endophytic antagonistic bacterias are Bacillus methylotrophicus, that is: Methylotrophic genus bacillus.
The present invention is divided into from obtaining 68 strain endogenetic bacterias from oil tea infected leaves, through flat board face-off screening, obtains bacterial strain 1 strain 7 kinds of Oil Tea Anthracnose germs being had to strong antagonistic effect.By cultivating shape, morphologic observation and Molecular Identification etc., identify that this bacterium is Methylotrophic genus bacillus, result of study is that the multiple anthrax pathogenic bacteria of biological control oil tea provides strain excellent.