CA3157323A1 - Synthetic spike-in controls for cell-free medip sequencing and methods of using same - Google Patents
Synthetic spike-in controls for cell-free medip sequencing and methods of using same Download PDFInfo
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- CA3157323A1 CA3157323A1 CA3157323A CA3157323A CA3157323A1 CA 3157323 A1 CA3157323 A1 CA 3157323A1 CA 3157323 A CA3157323 A CA 3157323A CA 3157323 A CA3157323 A CA 3157323A CA 3157323 A1 CA3157323 A1 CA 3157323A1
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- C12N15/09—Recombinant DNA-technology
- C12N15/10—Processes for the isolation, preparation or purification of DNA or RNA
- C12N15/1034—Isolating an individual clone by screening libraries
- C12N15/1082—Preparation or screening gene libraries by chromosomal integration of polynucleotide sequences, HR-, site-specific-recombination, transposons, viral vectors
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- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
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- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6869—Methods for sequencing
- C12Q1/6874—Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation
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- C12Q2522/00—Reaction characterised by the use of non-enzymatic proteins
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- C12Q2535/00—Reactions characterised by the assay type for determining the identity of a nucleotide base or a sequence of oligonucleotides
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- C12Q2537/00—Reactions characterised by the reaction format or use of a specific feature
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- C12Q2545/00—Reactions characterised by their quantitative nature
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- C12Q2545/00—Reactions characterised by their quantitative nature
- C12Q2545/10—Reactions characterised by their quantitative nature the purpose being quantitative analysis
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- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/154—Methylation markers
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- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/166—Oligonucleotides used as internal standards, controls or normalisation probes
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- Organic Chemistry (AREA)
- Engineering & Computer Science (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Genetics & Genomics (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Analytical Chemistry (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Biotechnology (AREA)
- General Engineering & Computer Science (AREA)
- Physics & Mathematics (AREA)
- General Health & Medical Sciences (AREA)
- Molecular Biology (AREA)
- Microbiology (AREA)
- Biophysics (AREA)
- Biochemistry (AREA)
- Immunology (AREA)
- Biomedical Technology (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Plant Pathology (AREA)
- Crystallography & Structural Chemistry (AREA)
- Pathology (AREA)
- Virology (AREA)
- Bioinformatics & Computational Biology (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Applications Claiming Priority (3)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201962931411P | 2019-11-06 | 2019-11-06 | |
| US62/931,411 | 2019-11-06 | ||
| PCT/CA2020/051507 WO2021087615A1 (en) | 2019-11-06 | 2020-11-06 | Synthetic spike-in controls for cell-free medip sequencing and methods of using same |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| CA3157323A1 true CA3157323A1 (en) | 2021-05-14 |
Family
ID=75849048
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CA3157323A Pending CA3157323A1 (en) | 2019-11-06 | 2020-11-06 | Synthetic spike-in controls for cell-free medip sequencing and methods of using same |
Country Status (9)
| Country | Link |
|---|---|
| US (1) | US20230024827A1 (https=) |
| EP (2) | EP4435118A3 (https=) |
| JP (1) | JP2023502018A (https=) |
| KR (1) | KR20220098183A (https=) |
| CN (1) | CN115087744A (https=) |
| BR (1) | BR112022008714A2 (https=) |
| CA (1) | CA3157323A1 (https=) |
| GB (1) | GB2609715B (https=) |
| WO (1) | WO2021087615A1 (https=) |
Cited By (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CN114045342A (zh) * | 2021-12-01 | 2022-02-15 | 大连晶泰生物技术有限公司 | 一种游离DNA(cfDNA)甲基化突变的检测方法及试剂盒 |
Families Citing this family (3)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CN111154846A (zh) * | 2020-01-13 | 2020-05-15 | 四川大学华西医院 | 一种甲基化核酸的检测方法 |
| US12592321B2 (en) | 2020-06-19 | 2026-03-31 | University Health Network | Cancer detection and classification using methylome analysis |
| KR20250019610A (ko) * | 2022-03-21 | 2025-02-10 | 빌리언투원, 인크. | 치료 모니터링을 위한 메틸화된 세포 유리 dna의 분자 계수 |
Family Cites Families (9)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| PT2850211T (pt) * | 2012-05-14 | 2021-11-29 | Irepertoire Inc | Método para aumentar a precisão na deteção quantitativa de polinucleótidos |
| EP3022321B1 (en) * | 2013-07-16 | 2021-01-13 | Zymo Research Corporation | Mirror bisulfite analysis |
| EP3978627A1 (en) * | 2016-03-25 | 2022-04-06 | Karius, Inc. | Methods using synthetic nucleic acid spike-ins |
| KR102522067B1 (ko) * | 2016-05-03 | 2023-04-13 | 유니버시티 헬스 네트워크 | 무-세포 메틸화된 dna의 포획 방법 및 이의 이용 |
| WO2018017710A1 (en) * | 2016-07-19 | 2018-01-25 | Exact Sciences Development Company, Llc | Nucleic acid control molecules from non-human organisms |
| BR112020000681A2 (pt) * | 2017-07-12 | 2020-07-14 | University Health Network | detecção e classificação de cancro utilizando análise de metilome |
| CN111094583A (zh) * | 2017-08-04 | 2020-05-01 | 十亿至一公司 | 与生物靶相关的定量中利用靶相关分子的测序输出确定和分析 |
| US20210156863A1 (en) * | 2017-11-03 | 2021-05-27 | University Health Network | Cancer detection, classification, prognostication, therapy prediction and therapy monitoring using methylome analysis |
| NZ765943A (en) * | 2018-01-08 | 2022-10-28 | Ludwig Inst For Cancer Res Ltd | Bisulfite-free, base-resolution identification of cytosine modifications |
-
2020
- 2020-11-06 CN CN202080092232.8A patent/CN115087744A/zh active Pending
- 2020-11-06 KR KR1020227018998A patent/KR20220098183A/ko active Pending
- 2020-11-06 JP JP2022526702A patent/JP2023502018A/ja active Pending
- 2020-11-06 GB GB2207732.5A patent/GB2609715B/en active Active
- 2020-11-06 EP EP24177800.0A patent/EP4435118A3/en active Pending
- 2020-11-06 EP EP20884272.4A patent/EP4055183A4/en not_active Withdrawn
- 2020-11-06 WO PCT/CA2020/051507 patent/WO2021087615A1/en not_active Ceased
- 2020-11-06 CA CA3157323A patent/CA3157323A1/en active Pending
- 2020-11-06 BR BR112022008714A patent/BR112022008714A2/pt unknown
-
2022
- 2022-05-04 US US17/736,570 patent/US20230024827A1/en active Pending
Cited By (3)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| CN114045342A (zh) * | 2021-12-01 | 2022-02-15 | 大连晶泰生物技术有限公司 | 一种游离DNA(cfDNA)甲基化突变的检测方法及试剂盒 |
| WO2023098137A1 (zh) * | 2021-12-01 | 2023-06-08 | 大连晶泰生物技术有限公司 | 一种游离dna甲基化突变的检测方法及试剂盒 |
| GB2620492A (en) * | 2021-12-01 | 2024-01-10 | Dalian Gentalker Bio Tech Co Ltd | Method and kit for detecting methylation mutation of free DNA |
Also Published As
| Publication number | Publication date |
|---|---|
| GB2609715A (en) | 2023-02-15 |
| GB202207732D0 (en) | 2022-07-13 |
| US20230024827A1 (en) | 2023-01-26 |
| EP4055183A1 (en) | 2022-09-14 |
| BR112022008714A2 (pt) | 2022-07-19 |
| WO2021087615A1 (en) | 2021-05-14 |
| JP2023502018A (ja) | 2023-01-20 |
| CN115087744A (zh) | 2022-09-20 |
| EP4055183A4 (en) | 2023-12-06 |
| EP4435118A3 (en) | 2025-01-15 |
| EP4435118A2 (en) | 2024-09-25 |
| KR20220098183A (ko) | 2022-07-11 |
| GB2609715B (en) | 2025-07-30 |
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