CA3139356C - AMPLIFICATION OF DEOXYRIBONUCLEIC ACID IN SOLID PHASE AND COMBINED SOLUBLE PHASE - Google Patents

AMPLIFICATION OF DEOXYRIBONUCLEIC ACID IN SOLID PHASE AND COMBINED SOLUBLE PHASE

Info

Publication number
CA3139356C
CA3139356C CA3139356A CA3139356A CA3139356C CA 3139356 C CA3139356 C CA 3139356C CA 3139356 A CA3139356 A CA 3139356A CA 3139356 A CA3139356 A CA 3139356A CA 3139356 C CA3139356 C CA 3139356C
Authority
CA
Canada
Prior art keywords
amplification
immobilised
nucleic acid
primers
primer
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Active
Application number
CA3139356A
Other languages
English (en)
French (fr)
Other versions
CA3139356A1 (en
Inventor
David Allan DAVIDSON
Graham WORSLEY
Jarrett KILLPACK
Samuel Reed
Original Assignee
Dnae Diagnostics Ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Dnae Diagnostics Ltd filed Critical Dnae Diagnostics Ltd
Priority to CA3251083A priority Critical patent/CA3251083A1/en
Publication of CA3139356A1 publication Critical patent/CA3139356A1/en
Application granted granted Critical
Publication of CA3139356C publication Critical patent/CA3139356C/en
Active legal-status Critical Current
Anticipated expiration legal-status Critical

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Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6816Hybridisation assays characterised by the detection means
    • C12Q1/6825Nucleic acid detection involving sensors
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/62Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/64Fluorescence; Phosphorescence
    • G01N21/6428Measuring fluorescence of fluorescent products of reactions or of fluorochrome labelled reactive substances, e.g. measuring quenching effects, using measuring "optrodes"
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N27/00Investigating or analysing materials by the use of electric, electrochemical, or magnetic means
    • G01N27/26Investigating or analysing materials by the use of electric, electrochemical, or magnetic means by investigating electrochemical variables; by using electrolysis or electrophoresis
    • G01N27/403Cells and electrode assemblies
    • G01N27/414Ion-sensitive or chemical field-effect transistors, i.e. ISFETS or CHEMFETS
    • G01N27/4145Ion-sensitive or chemical field-effect transistors, i.e. ISFETS or CHEMFETS specially adapted for biomolecules, e.g. gate electrode with immobilised receptors
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813Hybridisation assays
    • C12Q1/6834Enzymatic or biochemical coupling of nucleic acids to a solid phase
    • C12Q1/6837Enzymatic or biochemical coupling of nucleic acids to a solid phase using probe arrays or probe chips
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/118Prognosis of disease development
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N21/00Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
    • G01N21/62Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light
    • G01N21/63Systems in which the material investigated is excited whereby it emits light or causes a change in wavelength of the incident light optically excited
    • G01N21/64Fluorescence; Phosphorescence
    • G01N21/6428Measuring fluorescence of fluorescent products of reactions or of fluorochrome labelled reactive substances, e.g. measuring quenching effects, using measuring "optrodes"
    • G01N2021/6439Measuring fluorescence of fluorescent products of reactions or of fluorochrome labelled reactive substances, e.g. measuring quenching effects, using measuring "optrodes" with indicators, stains, dyes, tags, labels, marks

Landscapes

  • Chemical & Material Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Analytical Chemistry (AREA)
  • Organic Chemistry (AREA)
  • Immunology (AREA)
  • Engineering & Computer Science (AREA)
  • Molecular Biology (AREA)
  • General Health & Medical Sciences (AREA)
  • Biochemistry (AREA)
  • Zoology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Wood Science & Technology (AREA)
  • Pathology (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • General Physics & Mathematics (AREA)
  • Genetics & Genomics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • General Engineering & Computer Science (AREA)
  • Biophysics (AREA)
  • Microbiology (AREA)
  • Optics & Photonics (AREA)
  • Nuclear Medicine, Radiotherapy & Molecular Imaging (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Microelectronics & Electronic Packaging (AREA)
  • Electrochemistry (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Saccharide Compounds (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
CA3139356A 2019-05-08 2020-05-07 AMPLIFICATION OF DEOXYRIBONUCLEIC ACID IN SOLID PHASE AND COMBINED SOLUBLE PHASE Active CA3139356C (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
CA3251083A CA3251083A1 (en) 2019-05-08 2020-05-07 Combined solution phase and solid phase dna amplification

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
GB201906461 2019-05-08
GB1906461.7 2019-05-08
PCT/GB2020/051122 WO2020225564A1 (en) 2019-05-08 2020-05-07 Combined solution phase and solid phase dna amplification

Related Child Applications (1)

Application Number Title Priority Date Filing Date
CA3251083A Division CA3251083A1 (en) 2019-05-08 2020-05-07 Combined solution phase and solid phase dna amplification

Publications (2)

Publication Number Publication Date
CA3139356A1 CA3139356A1 (en) 2020-11-12
CA3139356C true CA3139356C (en) 2025-04-01

Family

ID=67002052

Family Applications (2)

Application Number Title Priority Date Filing Date
CA3139356A Active CA3139356C (en) 2019-05-08 2020-05-07 AMPLIFICATION OF DEOXYRIBONUCLEIC ACID IN SOLID PHASE AND COMBINED SOLUBLE PHASE
CA3251083A Pending CA3251083A1 (en) 2019-05-08 2020-05-07 Combined solution phase and solid phase dna amplification

Family Applications After (1)

Application Number Title Priority Date Filing Date
CA3251083A Pending CA3251083A1 (en) 2019-05-08 2020-05-07 Combined solution phase and solid phase dna amplification

Country Status (7)

Country Link
US (1) US20220333167A1 (https=)
EP (3) EP3966346B1 (https=)
JP (2) JP7611858B2 (https=)
CN (3) CN119753103A (https=)
CA (2) CA3139356C (https=)
ES (3) ES2954784T3 (https=)
WO (1) WO2020225564A1 (https=)

Families Citing this family (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2022104138A1 (en) * 2020-11-14 2022-05-19 Life Technologies Corporation System and method for automated repeat sequencing

Family Cites Families (11)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6531302B1 (en) * 1999-04-12 2003-03-11 Nanogen/Becton Dickinson Partnership Anchored strand displacement amplification on an electronically addressable microchip
US7575865B2 (en) * 2003-01-29 2009-08-18 454 Life Sciences Corporation Methods of amplifying and sequencing nucleic acids
JP2009000070A (ja) * 2007-06-22 2009-01-08 Hitachi Ltd 大規模並列核酸分析方法
JP4853403B2 (ja) * 2007-07-02 2012-01-11 セイコーエプソン株式会社 画像読み取り装置
WO2012042399A1 (en) 2010-09-30 2012-04-05 Nxp B.V. Biosensor device and method
GB2500715A (en) 2012-03-30 2013-10-02 Gene Onyx Ltd Single nucleotide polymorphism detection using an ISFET array
US9914968B2 (en) 2012-09-26 2018-03-13 Cepheid Honeycomb tube
ES2640570T3 (es) * 2012-10-18 2017-11-03 F. Hoffmann-La Roche Ag Ensayo de doble sonda para la detección de VHC
GB201407334D0 (en) * 2014-04-25 2014-06-11 Dna Electronics Ltd Integrated nucleic acid test system, instrument and method
HK1243466A1 (zh) 2014-11-05 2018-07-13 加州理工学院 生物体对药物的响应的微流体测量
WO2018046689A1 (en) * 2016-09-08 2018-03-15 Danmarks Tekniske Universitet A polymeric chip system and uses thereof

Also Published As

Publication number Publication date
EP3966346B1 (en) 2023-08-23
CN114207146A (zh) 2022-03-18
CA3139356A1 (en) 2020-11-12
EP4524260A2 (en) 2025-03-19
ES3052734T3 (en) 2026-01-13
EP3966346A1 (en) 2022-03-16
EP4293124B1 (en) 2025-02-19
JP2025060794A (ja) 2025-04-10
CA3251083A1 (en) 2025-10-30
EP4293124A2 (en) 2023-12-20
ES2954784T3 (es) 2023-11-24
EP4524260A3 (en) 2025-05-14
EP4293124A3 (en) 2024-01-17
JP2022531707A (ja) 2022-07-08
CN119955908A (zh) 2025-05-09
CN119753103A (zh) 2025-04-04
WO2020225564A1 (en) 2020-11-12
US20220333167A1 (en) 2022-10-20
JP7611858B2 (ja) 2025-01-10
EP4524260B1 (en) 2025-10-22
CN114207146B (zh) 2025-01-10
ES3023484T3 (en) 2025-06-02

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