CA2948939C - Noninvasive detection of fetal genetic abnormality - Google Patents

Noninvasive detection of fetal genetic abnormality Download PDF

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Publication number
CA2948939C
CA2948939C CA2948939A CA2948939A CA2948939C CA 2948939 C CA2948939 C CA 2948939C CA 2948939 A CA2948939 A CA 2948939A CA 2948939 A CA2948939 A CA 2948939A CA 2948939 C CA2948939 C CA 2948939C
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chromosome
coverage depth
content
fetal
calculated
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French (fr)
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CA2948939A1 (en
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Fuman Jiang
Huifei Chen
Xianghua Chai
Yuying Yuan
Xiuqing Zhang
Fang Chen
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BGI Genomics Co Ltd
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BGI Diagnosis Co Ltd
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Application filed by BGI Diagnosis Co Ltd filed Critical BGI Diagnosis Co Ltd
Priority to CA2948939A priority Critical patent/CA2948939C/en
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    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/10Ploidy or copy number detection
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10Sequence alignment; Homology search
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/156Polymorphic or mutational markers
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B20/00ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
    • G16B20/20Allele or variant detection, e.g. single nucleotide polymorphism [SNP] detection
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00ICT specially adapted for sequence analysis involving nucleotides or amino acids

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  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Physics & Mathematics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Analytical Chemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Biotechnology (AREA)
  • Genetics & Genomics (AREA)
  • Organic Chemistry (AREA)
  • Molecular Biology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Evolutionary Biology (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Medical Informatics (AREA)
  • Theoretical Computer Science (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Biochemistry (AREA)
  • Microbiology (AREA)
  • Immunology (AREA)
  • General Engineering & Computer Science (AREA)
  • Pathology (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
CA2948939A 2011-06-29 2011-06-29 Noninvasive detection of fetal genetic abnormality Active CA2948939C (en)

Priority Applications (1)

Application Number Priority Date Filing Date Title
CA2948939A CA2948939C (en) 2011-06-29 2011-06-29 Noninvasive detection of fetal genetic abnormality

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
CA2948939A CA2948939C (en) 2011-06-29 2011-06-29 Noninvasive detection of fetal genetic abnormality
PCT/CN2011/001070 WO2013000100A1 (en) 2011-06-29 2011-06-29 Noninvasive detection of fetal genetic abnormality
CA2791118A CA2791118C (en) 2011-06-29 2011-06-29 Noninvasive detection of fetal genetic abnormality

Related Parent Applications (1)

Application Number Title Priority Date Filing Date
CA2791118A Division CA2791118C (en) 2011-06-29 2011-06-29 Noninvasive detection of fetal genetic abnormality

Publications (2)

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CA2948939A1 CA2948939A1 (en) 2012-12-29
CA2948939C true CA2948939C (en) 2021-02-02

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CA2948939A Active CA2948939C (en) 2011-06-29 2011-06-29 Noninvasive detection of fetal genetic abnormality
CA2791118A Active CA2791118C (en) 2011-06-29 2011-06-29 Noninvasive detection of fetal genetic abnormality

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CA2791118A Active CA2791118C (en) 2011-06-29 2011-06-29 Noninvasive detection of fetal genetic abnormality

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US (1) US9547748B2 (enExample)
EP (1) EP2561103B1 (enExample)
JP (1) JP5659319B2 (enExample)
KR (1) KR101489568B1 (enExample)
CN (1) CN103403183B (enExample)
AU (1) AU2012261664B2 (enExample)
BR (1) BR112012033760B1 (enExample)
CA (2) CA2948939C (enExample)
DK (1) DK2561103T3 (enExample)
ES (1) ES2512448T3 (enExample)
MY (1) MY172864A (enExample)
PL (1) PL2561103T3 (enExample)
RU (1) RU2589681C2 (enExample)
SG (1) SG191757A1 (enExample)
SI (1) SI2561103T1 (enExample)
WO (1) WO2013000100A1 (enExample)
ZA (1) ZA201209583B (enExample)

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JP2014520509A (ja) 2014-08-25
EP2561103A4 (en) 2013-08-07
AU2012261664A1 (en) 2013-01-17
RU2589681C2 (ru) 2016-07-10
US20140099642A1 (en) 2014-04-10
CA2791118C (en) 2019-05-07
PL2561103T3 (pl) 2015-02-27
ZA201209583B (en) 2014-01-29
CN103403183B (zh) 2014-10-15
SG191757A1 (en) 2013-08-30
JP5659319B2 (ja) 2015-01-28
KR101489568B1 (ko) 2015-02-03
HK1190758A1 (en) 2014-07-11
BR112012033760A2 (pt) 2018-02-27
AU2012261664B2 (en) 2014-07-03
RU2012158107A (ru) 2015-08-10
BR112012033760B1 (pt) 2020-11-17
DK2561103T3 (da) 2014-10-20
MY172864A (en) 2019-12-13
WO2013000100A1 (en) 2013-01-03
CN103403183A (zh) 2013-11-20
ES2512448T3 (es) 2014-10-24
CA2948939A1 (en) 2012-12-29
EP2561103A1 (en) 2013-02-27
EP2561103B1 (en) 2014-08-27
KR20140023847A (ko) 2014-02-27
CA2791118A1 (en) 2012-12-29
US9547748B2 (en) 2017-01-17
SI2561103T1 (sl) 2014-11-28

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