CA2908379C - Photoresponsive nucleotide analogue having photocrosslinking ability - Google Patents

Photoresponsive nucleotide analogue having photocrosslinking ability Download PDF

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Publication number
CA2908379C
CA2908379C CA2908379A CA2908379A CA2908379C CA 2908379 C CA2908379 C CA 2908379C CA 2908379 A CA2908379 A CA 2908379A CA 2908379 A CA2908379 A CA 2908379A CA 2908379 C CA2908379 C CA 2908379C
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Canada
Prior art keywords
group
formula
hydrogen atom
represented
following formula
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Active
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CA2908379A
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English (en)
French (fr)
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CA2908379A1 (en
Inventor
Kenzo Fujimoto
Takashi Sakamoto
Yuya Tanaka
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Japan Science and Technology Agency
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Japan Science and Technology Agency
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    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07F—ACYCLIC, CARBOCYCLIC OR HETEROCYCLIC COMPOUNDS CONTAINING ELEMENTS OTHER THAN CARBON, HYDROGEN, HALOGEN, OXYGEN, NITROGEN, SULFUR, SELENIUM OR TELLURIUM
    • C07F9/00—Compounds containing elements of Groups 5 or 15 of the Periodic Table
    • C07F9/02—Phosphorus compounds
    • C07F9/547—Heterocyclic compounds, e.g. containing phosphorus as a ring hetero atom
    • C07F9/553—Heterocyclic compounds, e.g. containing phosphorus as a ring hetero atom having one nitrogen atom as the only ring hetero atom
    • C07F9/572—Five-membered rings
    • C07F9/5728—Five-membered rings condensed with carbocyclic rings or carbocyclic ring systems
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01J—CHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
    • B01J19/00—Chemical, physical or physico-chemical processes in general; Their relevant apparatus
    • B01J19/08—Processes employing the direct application of electric or wave energy, or particle radiation; Apparatus therefor
    • B01J19/12—Processes employing the direct application of electric or wave energy, or particle radiation; Apparatus therefor employing electromagnetic waves
    • B01J19/121—Coherent waves, e.g. laser beams
    • B—PERFORMING OPERATIONS; TRANSPORTING
    • B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
    • B01J—CHEMICAL OR PHYSICAL PROCESSES, e.g. CATALYSIS OR COLLOID CHEMISTRY; THEIR RELEVANT APPARATUS
    • B01J19/00—Chemical, physical or physico-chemical processes in general; Their relevant apparatus
    • B01J19/08—Processes employing the direct application of electric or wave energy, or particle radiation; Apparatus therefor
    • B01J19/12—Processes employing the direct application of electric or wave energy, or particle radiation; Apparatus therefor employing electromagnetic waves
    • B01J19/122—Incoherent waves
    • B01J19/123—Ultraviolet light
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07D—HETEROCYCLIC COMPOUNDS
    • C07D209/00—Heterocyclic compounds containing five-membered rings, condensed with other rings, with one nitrogen atom as the only ring hetero atom
    • C07D209/56—Ring systems containing three or more rings
    • C07D209/80—[b, c]- or [b, d]-condensed
    • C07D209/82—Carbazoles; Hydrogenated carbazoles
    • C07D209/86—Carbazoles; Hydrogenated carbazoles with only hydrogen atoms, hydrocarbon or substituted hydrocarbon radicals, directly attached to carbon atoms of the ring system
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07D—HETEROCYCLIC COMPOUNDS
    • C07D209/00—Heterocyclic compounds containing five-membered rings, condensed with other rings, with one nitrogen atom as the only ring hetero atom
    • C07D209/56—Ring systems containing three or more rings
    • C07D209/80—[b, c]- or [b, d]-condensed
    • C07D209/82—Carbazoles; Hydrogenated carbazoles
    • C07D209/88—Carbazoles; Hydrogenated carbazoles with hetero atoms or with carbon atoms having three bonds to hetero atoms with at the most one bond to halogen, e.g. ester or nitrile radicals, directly attached to carbon atoms of the ring system
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H19/00—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof
    • C07H19/02—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof sharing nitrogen
    • C07H19/04—Heterocyclic radicals containing only nitrogen atoms as ring hetero atom
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H21/00—Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H21/00—Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids
    • C07H21/02—Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids with ribosyl as saccharide radical
    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H21/00—Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids
    • C07H21/04—Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids with deoxyribosyl as saccharide radical
    • C—CHEMISTRY; METALLURGY
    • C08—ORGANIC MACROMOLECULAR COMPOUNDS; THEIR PREPARATION OR CHEMICAL WORKING-UP; COMPOSITIONS BASED THEREON
    • C08F—MACROMOLECULAR COMPOUNDS OBTAINED BY REACTIONS ONLY INVOLVING CARBON-TO-CARBON UNSATURATED BONDS
    • C08F232/00—Copolymers of cyclic compounds containing no unsaturated aliphatic radicals in a side chain, and having one or more carbon-to-carbon double bonds in a carbocyclic ring system
    • C08F232/08—Copolymers of cyclic compounds containing no unsaturated aliphatic radicals in a side chain, and having one or more carbon-to-carbon double bonds in a carbocyclic ring system having condensed rings

Landscapes

  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Molecular Biology (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Biotechnology (AREA)
  • Engineering & Computer Science (AREA)
  • Genetics & Genomics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Physics & Mathematics (AREA)
  • Electromagnetism (AREA)
  • Toxicology (AREA)
  • Medicinal Chemistry (AREA)
  • Polymers & Plastics (AREA)
  • Optics & Photonics (AREA)
  • Saccharide Compounds (AREA)
  • Indole Compounds (AREA)
  • Addition Polymer Or Copolymer, Post-Treatments, Or Chemical Modifications (AREA)
  • Organic Low-Molecular-Weight Compounds And Preparation Thereof (AREA)
CA2908379A 2013-03-28 2014-03-27 Photoresponsive nucleotide analogue having photocrosslinking ability Active CA2908379C (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
JP2013-070381 2013-03-28
JP2013070381 2013-03-28
PCT/JP2014/058988 WO2014157565A1 (ja) 2013-03-28 2014-03-27 光クロスリンク能を有する光応答性ヌクレオチドアナログ

Publications (2)

Publication Number Publication Date
CA2908379A1 CA2908379A1 (en) 2014-10-02
CA2908379C true CA2908379C (en) 2021-03-30

Family

ID=51624521

Family Applications (1)

Application Number Title Priority Date Filing Date
CA2908379A Active CA2908379C (en) 2013-03-28 2014-03-27 Photoresponsive nucleotide analogue having photocrosslinking ability

Country Status (6)

Country Link
US (1) US10450334B2 (enExample)
EP (1) EP2980073B1 (enExample)
JP (2) JP5925383B2 (enExample)
CN (1) CN105579437B (enExample)
CA (1) CA2908379C (enExample)
WO (1) WO2014157565A1 (enExample)

Families Citing this family (8)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2014157565A1 (ja) * 2013-03-28 2014-10-02 国立大学法人北陸先端科学技術大学院大学 光クロスリンク能を有する光応答性ヌクレオチドアナログ
WO2015064718A1 (ja) * 2013-10-30 2015-05-07 国立大学法人北陸先端科学技術大学院大学 光架橋形成抑制方法、及び自己架橋体形成抑制型光応答性核酸
EP3484908A4 (en) 2016-07-15 2020-04-08 AM Chemicals Llc NON-NUCLEOSIDIC SOLID CARRIERS AND PHOSPHORAMIDITE BUILDING BLOCKS FOR OLIGONUCLEOTID SYNTHESIS
JP6920689B2 (ja) * 2017-07-26 2021-08-18 日華化学株式会社 可視光域で光架橋可能な光応答性ヌクレオチドアナログ
EP3660022A4 (en) 2017-07-26 2021-04-21 Japan Advanced Institute of Science and Technology Photoresponsive nucleotide analog capable of photocrosslinking in visible light region
JP7104399B2 (ja) * 2018-04-04 2022-07-21 国立大学法人北陸先端科学技術大学院大学 光反応性人工アミノ酸、及び光架橋性人工ポリペプチド
WO2021215428A1 (ja) 2020-04-22 2021-10-28 日華化学株式会社 核酸の検出方法及びオリゴヌクレオチドプローブ
CN117105996B (zh) * 2023-10-24 2024-02-06 北京瑞博奥医药科技有限公司 一种脱氧核糖衍生物的制备的方法

Family Cites Families (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
NZ239250A (en) 1990-08-09 1993-12-23 Genta Inc Chirally pure non-nucleotide reagents for use in preparing
JP3753942B2 (ja) 2000-03-10 2006-03-08 独立行政法人科学技術振興機構 ５−ピリミジン含有核酸、それを用いた可逆的連結方法
JP3753938B2 (ja) 2000-12-15 2006-03-08 独立行政法人科学技術振興機構 光連結性ヌクレオシド含有ｄｎａを用いて塩基を点変異する方法
TW200528467A (en) * 2004-02-27 2005-09-01 Japan Science & Tech Agency DNA enzyme and method of controlling the activity thereof
WO2009066447A1 (ja) * 2007-11-19 2009-05-28 Japan Advanced Institute Of Science And Technology 光クロスリンク能を有する光応答性人工ヌクレオチド
JP4814904B2 (ja) 2008-04-16 2011-11-16 国立大学法人北陸先端科学技術大学院大学 核酸類の配列選択的な精製方法
US20120040397A1 (en) * 2008-08-05 2012-02-16 Dan Luo Photo-Crosslinked Nucleic Acid Hydrogels
WO2010147673A2 (en) * 2009-06-19 2010-12-23 University Of Florida Research Foundation, Inc. Single-dna molecule nanomotor regulated by photons
WO2014157565A1 (ja) * 2013-03-28 2014-10-02 国立大学法人北陸先端科学技術大学院大学 光クロスリンク能を有する光応答性ヌクレオチドアナログ
WO2015064718A1 (ja) * 2013-10-30 2015-05-07 国立大学法人北陸先端科学技術大学院大学 光架橋形成抑制方法、及び自己架橋体形成抑制型光応答性核酸

Also Published As

Publication number Publication date
EP2980073B1 (en) 2020-05-13
JPWO2014157565A1 (ja) 2017-02-16
EP2980073A1 (en) 2016-02-03
EP2980073A4 (en) 2016-11-30
JP6312729B2 (ja) 2018-04-18
WO2014157565A1 (ja) 2014-10-02
CA2908379A1 (en) 2014-10-02
CN105579437B (zh) 2019-03-08
JP2016145229A (ja) 2016-08-12
US10450334B2 (en) 2019-10-22
JP5925383B2 (ja) 2016-05-25
CN105579437A (zh) 2016-05-11
US20160031918A1 (en) 2016-02-04

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