CA2425434A1 - Methods for characterizing molecular interactions using affinity capture tandem mass spectrometry - Google Patents

Methods for characterizing molecular interactions using affinity capture tandem mass spectrometry Download PDF

Info

Publication number
CA2425434A1
CA2425434A1 CA002425434A CA2425434A CA2425434A1 CA 2425434 A1 CA2425434 A1 CA 2425434A1 CA 002425434 A CA002425434 A CA 002425434A CA 2425434 A CA2425434 A CA 2425434A CA 2425434 A1 CA2425434 A1 CA 2425434A1
Authority
CA
Canada
Prior art keywords
binding partner
binding
probe
protein
affinity capture
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Abandoned
Application number
CA002425434A
Other languages
English (en)
French (fr)
Inventor
Tina Morris
Scot Weinberger
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Human Genome Sciences Inc
Aspira Womens Health Inc
Original Assignee
Individual
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Individual filed Critical Individual
Publication of CA2425434A1 publication Critical patent/CA2425434A1/en
Abandoned legal-status Critical Current

Links

Classifications

    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/68Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
    • G01N33/6803General methods of protein analysis not limited to specific proteins or families of proteins
    • G01N33/6848Methods of protein analysis involving mass spectrometry
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/68Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
    • G01N33/6803General methods of protein analysis not limited to specific proteins or families of proteins
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/68Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
    • G01N33/6803General methods of protein analysis not limited to specific proteins or families of proteins
    • G01N33/6818Sequencing of polypeptides
    • GPHYSICS
    • G01MEASURING; TESTING
    • G01NINVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/50Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
    • G01N33/68Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
    • G01N33/6803General methods of protein analysis not limited to specific proteins or families of proteins
    • G01N33/6848Methods of protein analysis involving mass spectrometry
    • G01N33/6851Methods of protein analysis involving laser desorption ionisation mass spectrometry
    • HELECTRICITY
    • H01ELECTRIC ELEMENTS
    • H01JELECTRIC DISCHARGE TUBES OR DISCHARGE LAMPS
    • H01J49/00Particle spectrometers or separator tubes
    • H01J49/004Combinations of spectrometers, tandem spectrometers, e.g. MS/MS, MSn
    • HELECTRICITY
    • H01ELECTRIC ELEMENTS
    • H01JELECTRIC DISCHARGE TUBES OR DISCHARGE LAMPS
    • H01J49/00Particle spectrometers or separator tubes
    • H01J49/02Details
    • H01J49/10Ion sources; Ion guns
    • H01J49/16Ion sources; Ion guns using surface ionisation, e.g. field-, thermionic- or photo-emission
    • H01J49/161Ion sources; Ion guns using surface ionisation, e.g. field-, thermionic- or photo-emission using photoionisation, e.g. by laser
    • H01J49/164Laser desorption/ionisation, e.g. matrix-assisted laser desorption/ionisation [MALDI]

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Molecular Biology (AREA)
  • Physics & Mathematics (AREA)
  • Chemical & Material Sciences (AREA)
  • Biomedical Technology (AREA)
  • Immunology (AREA)
  • Urology & Nephrology (AREA)
  • Hematology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Analytical Chemistry (AREA)
  • Microbiology (AREA)
  • General Physics & Mathematics (AREA)
  • Biotechnology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Food Science & Technology (AREA)
  • Medicinal Chemistry (AREA)
  • Biophysics (AREA)
  • Biochemistry (AREA)
  • General Health & Medical Sciences (AREA)
  • Cell Biology (AREA)
  • Pathology (AREA)
  • Optics & Photonics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Plasma & Fusion (AREA)
  • Other Investigation Or Analysis Of Materials By Electrical Means (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
CA002425434A 2000-10-11 2000-10-11 Methods for characterizing molecular interactions using affinity capture tandem mass spectrometry Abandoned CA2425434A1 (en)

Applications Claiming Priority (1)

Application Number Priority Date Filing Date Title
PCT/US2000/028261 WO2002031484A2 (en) 2000-10-11 2000-10-11 Methods for characterizing molecular interactions using affinity capture tandem mass spectrometry

Publications (1)

Publication Number Publication Date
CA2425434A1 true CA2425434A1 (en) 2002-04-18

Family

ID=21741885

Family Applications (1)

Application Number Title Priority Date Filing Date
CA002425434A Abandoned CA2425434A1 (en) 2000-10-11 2000-10-11 Methods for characterizing molecular interactions using affinity capture tandem mass spectrometry

Country Status (7)

Country Link
US (1) US20030219731A1 (enExample)
EP (1) EP1327151A2 (enExample)
JP (1) JP2004511773A (enExample)
CN (1) CN1474944A (enExample)
AU (1) AU1199501A (enExample)
CA (1) CA2425434A1 (enExample)
WO (1) WO2002031484A2 (enExample)

Families Citing this family (14)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
SE0101555D0 (sv) * 2001-05-04 2001-05-04 Amersham Pharm Biotech Ab Fast variable gain detector system and method of controlling the same
US6946653B2 (en) * 2001-11-27 2005-09-20 Ciphergen Biosystems, Inc. Methods and apparatus for improved laser desorption ionization tandem mass spectrometry
US7846748B2 (en) * 2002-12-02 2010-12-07 The University Of North Carolina At Chapel Hill Methods of quantitation and identification of peptides and proteins
CN1314968C (zh) * 2004-03-11 2007-05-09 复旦大学 痕量多肽或蛋白质富集及其直接分析方法
CN100376895C (zh) * 2004-11-03 2008-03-26 中国科学院计算技术研究所 一种使用串联质谱数据鉴定肽的方法
CN100483394C (zh) * 2006-04-14 2009-04-29 中国科学院计算技术研究所 一种质谱数据处理中噪音基线识别方法
US7879799B2 (en) * 2006-08-10 2011-02-01 Institute For Systems Biology Methods for characterizing glycoproteins and generating antibodies for same
EP3511973B1 (en) * 2010-12-28 2021-08-04 Quest Diagnostics Investments LLC Quantitation of insulin by mass spectrometry
GB201110272D0 (en) 2011-06-17 2011-08-03 Isis Innovation Metod of detection by mass spectrometry
CN203367223U (zh) * 2012-05-21 2013-12-25 核工业北京地质研究院 热电离飞行时间质谱仪
WO2015189749A1 (en) * 2014-06-13 2015-12-17 Dh Technologies Development Pte. Ltd. Methods for analysis of lipids using mass spectrometry
CA2966315A1 (en) * 2014-10-30 2016-05-06 Dh Technologies Development Pte. Ltd. Methods and systems for selecting ions for ion fragmentation
US10049868B2 (en) * 2016-12-06 2018-08-14 Rapiscan Systems, Inc. Apparatus for detecting constituents in a sample and method of using the same
CN114383984B (zh) * 2021-12-06 2022-09-23 浙江大学 一种捕获颗粒物并测量其相态、形貌和化学组分的系统

Family Cites Families (14)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5288644A (en) * 1990-04-04 1994-02-22 The Rockefeller University Instrument and method for the sequencing of genome
US5202563A (en) * 1991-05-16 1993-04-13 The Johns Hopkins University Tandem time-of-flight mass spectrometer
US5144127A (en) * 1991-08-02 1992-09-01 Williams Evan R Surface induced dissociation with reflectron time-of-flight mass spectrometry
US5382793A (en) * 1992-03-06 1995-01-17 Hewlett-Packard Company Laser desorption ionization mass monitor (LDIM)
ATE242485T1 (de) * 1993-05-28 2003-06-15 Baylor College Medicine Verfahren und massenspektrometer zur desorption und ionisierung von analyten
US6020208A (en) * 1994-05-27 2000-02-01 Baylor College Of Medicine Systems for surface-enhanced affinity capture for desorption and detection of analytes
US6017693A (en) * 1994-03-14 2000-01-25 University Of Washington Identification of nucleotides, amino acids, or carbohydrates by mass spectrometry
US5498545A (en) * 1994-07-21 1996-03-12 Vestal; Marvin L. Mass spectrometer system and method for matrix-assisted laser desorption measurements
US5777324A (en) * 1996-09-19 1998-07-07 Sequenom, Inc. Method and apparatus for maldi analysis
NZ516848A (en) * 1997-06-20 2004-03-26 Ciphergen Biosystems Inc Retentate chromatography apparatus with applications in biology and medicine
GB9717926D0 (en) * 1997-08-22 1997-10-29 Micromass Ltd Methods and apparatus for tandem mass spectrometry
US6348688B1 (en) * 1998-02-06 2002-02-19 Perseptive Biosystems Tandem time-of-flight mass spectrometer with delayed extraction and method for use
US6428956B1 (en) * 1998-03-02 2002-08-06 Isis Pharmaceuticals, Inc. Mass spectrometric methods for biomolecular screening
US6723564B2 (en) * 1998-05-07 2004-04-20 Sequenom, Inc. IR MALDI mass spectrometry of nucleic acids using liquid matrices

Also Published As

Publication number Publication date
US20030219731A1 (en) 2003-11-27
WO2002031484A2 (en) 2002-04-18
AU1199501A (en) 2002-04-22
WO2002031484A8 (en) 2003-09-04
WO2002031484A3 (en) 2002-07-25
JP2004511773A (ja) 2004-04-15
EP1327151A2 (en) 2003-07-16
CN1474944A (zh) 2004-02-11

Similar Documents

Publication Publication Date Title
US20020182649A1 (en) Methods for protein identification, characterization and sequencing by tandem mass spectrometry
US20020195555A1 (en) Apparatus and methods for affinity capture tandem mass spectrometry
US8633031B2 (en) Expression quantification using mass spectrometry
Yang et al. Characterization of glycopeptides using a stepped higher‐energy C‐trap dissociation approach on a hybrid quadrupole orbitrap
US11428696B2 (en) Mass spectrometry analysis of mutant polypeptides in biological samples
US20030219731A1 (en) Methods for characterizing molecular interactions using affinity capture tandem mass spectrometry
Nishikaze Sensitive and structure-informative N-glycosylation analysis by MALDI-MS; ionization, fragmentation, and derivatization
Mo et al. Analytical aspects of mass spectrometry and proteomics
US11726096B2 (en) Fast protein sequencing
CA2425456A1 (en) Apparatus and methods for affinity capture tandem mass spectrometry
WO2014121031A1 (en) Characterization of antibody mixtures by mass spectrometry
US20060078960A1 (en) Expression quantification using mass spectrometry
Matthiesen et al. Introduction to mass spectrometry-based proteomics
EP1735813A2 (en) Identification of modified peptides by mass spectrometry
EP1617224A1 (en) De novo sequencing using tandem mass spectrometry
US20080138909A1 (en) Mass Spectrometry of Arginine-Containing Peptides
Zhao et al. Analysis of protein glycosylation and phosphorylation using liquid phase separation, protein microarray technology, and mass spectrometry
JP2019052995A (ja) 糖タンパク質における糖鎖の結合領域の同定方法およびキット
DeSouza Cancer Biomarker Discovery Using Mass Spectrometry
Zhang Method development of characterization of N-linked glycoproteins in mass spectrometry
Wei et al. Parallel Structural Characterization of Glycopeptides and Glycoprotein Quantification by Electrospray Quadrupole Ion-mobility Time-of-flight Mass Spectrometry with Ultra Performance Liquid Chromatography
Arnott Basics of TSQ/IT Mass Spectrometry: precursor, product, and neutral loss scanning. ESI and nanospray ionisation
Claude et al. LC/MALDI.• The chromatographic enhancement was evaluated by on-line nanoscale HPLC coupled with Electrospray on a Q-Tof PremierTM.• LC-MALDI/MS/MS analysis was also

Legal Events

Date Code Title Description
FZDE Discontinued