AU2012325990B2 - Method to determine zygosity of the fad3 gene in canola - Google Patents

Method to determine zygosity of the fad3 gene in canola Download PDF

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Publication number
AU2012325990B2
AU2012325990B2 AU2012325990A AU2012325990A AU2012325990B2 AU 2012325990 B2 AU2012325990 B2 AU 2012325990B2 AU 2012325990 A AU2012325990 A AU 2012325990A AU 2012325990 A AU2012325990 A AU 2012325990A AU 2012325990 B2 AU2012325990 B2 AU 2012325990B2
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AU
Australia
Prior art keywords
probe
fad
canola
primer
sequence
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AU2012325990A
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English (en)
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AU2012325990A1 (en
Inventor
Chandra Shekara A. Channabasavaradhya
Zoe Ehlert
Manju Gupta
Lasantha Chandana Ubayasena
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Corteva Agriscience LLC
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Corteva Agriscience LLC
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Assigned to CORTEVA AGRISCIENCE LLC reassignment CORTEVA AGRISCIENCE LLC Request to Amend Deed and Register Assignors: DOW AGROSCIENCES, LLC
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    • C—CHEMISTRY; METALLURGY
    • C07—ORGANIC CHEMISTRY
    • C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H21/00—Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids
    • C07H21/04—Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids with deoxyribosyl as saccharide radical
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/6895—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for plants, fungi or algae
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/156—Polymorphic or mutational markers

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Analytical Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Biotechnology (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Molecular Biology (AREA)
  • Biochemistry (AREA)
  • Genetics & Genomics (AREA)
  • General Health & Medical Sciences (AREA)
  • Botany (AREA)
  • Biophysics (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Physics & Mathematics (AREA)
  • Mycology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
AU2012325990A 2011-10-21 2012-10-19 Method to determine zygosity of the fad3 gene in canola Active AU2012325990B2 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US201161550170P 2011-10-21 2011-10-21
US61/550,170 2011-10-21
PCT/US2012/061000 WO2013059578A1 (en) 2011-10-21 2012-10-19 Method to determine zygosity of the fad3 gene in canola

Publications (2)

Publication Number Publication Date
AU2012325990A1 AU2012325990A1 (en) 2014-04-24
AU2012325990B2 true AU2012325990B2 (en) 2018-04-19

Family

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Family Applications (1)

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AU2012325990A Active AU2012325990B2 (en) 2011-10-21 2012-10-19 Method to determine zygosity of the fad3 gene in canola

Country Status (17)

Country Link
US (3) US9663832B2 (enExample)
EP (2) EP3342882A1 (enExample)
JP (1) JP2014530624A (enExample)
CN (1) CN104011225A (enExample)
AR (1) AR088407A1 (enExample)
AU (1) AU2012325990B2 (enExample)
CA (1) CA2852934C (enExample)
ES (1) ES2660976T3 (enExample)
HK (1) HK1201076A1 (enExample)
HU (1) HUE037107T2 (enExample)
IN (1) IN2014DN03017A (enExample)
NO (1) NO2823060T3 (enExample)
PL (1) PL2768984T3 (enExample)
PT (1) PT2768984T (enExample)
RU (2) RU2630998C2 (enExample)
UA (1) UA114301C2 (enExample)
WO (1) WO2013059578A1 (enExample)

Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2004072259A2 (en) * 2003-02-11 2004-08-26 Dow Agrosciences Llc Altered fad2 and fad3 genes in brassica and the molecular marker-assisted detection thereof
WO2011060946A1 (en) * 2009-11-20 2011-05-26 Bayer Bioscience N.V. Brassica plants comprising mutant fad3 alleles
US20110151441A1 (en) * 2009-12-18 2011-06-23 Dow Agrosciences Llc Endpoint taqman methods for determining zygosity of corn comprising tc1507 events

Family Cites Families (12)

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US4965188A (en) 1986-08-22 1990-10-23 Cetus Corporation Process for amplifying, detecting, and/or cloning nucleic acid sequences using a thermostable enzyme
US4683195A (en) 1986-01-30 1987-07-28 Cetus Corporation Process for amplifying, detecting, and/or-cloning nucleic acid sequences
US5176995A (en) 1985-03-28 1993-01-05 Hoffmann-La Roche Inc. Detection of viruses by amplification and hybridization
US4683202A (en) 1985-03-28 1987-07-28 Cetus Corporation Process for amplifying nucleic acid sequences
ZA973565B (en) * 1996-04-26 1998-10-26 Du Pont Soybean oil having high oxidative stability
BR0013607A (pt) * 1999-08-26 2002-04-30 Calgene Llc Sequências de ácidos nucléicos e processos de uso para a produção de plantas com ácidos graxos poliinsaturados modificados
CA2284246A1 (en) * 1999-10-01 2001-04-01 Agriculture And Agrifood Canada Of Agriculture And Agri-Food Plant fatty acid desaturases and alleles therefor
EP2136911A2 (en) * 2007-01-19 2009-12-30 Biodot, Inc. Systems and methods for high speed array printing and hybridization
CN101591697A (zh) * 2008-05-27 2009-12-02 北京华安佛医药研究中心有限公司 一种检测巯基嘌呤甲基转移酶基因a719g多态性位点基因型的试剂盒、方法和用途
CN102822344A (zh) * 2009-12-17 2012-12-12 密苏里大学管委会 种子油含量相关的植物基因及其使用方法
CN101818196B (zh) * 2009-12-28 2012-02-08 华中农业大学 甘蓝型油菜低亚麻酸分子标记及其制备方法与应用
BR112013009001A2 (pt) * 2010-10-12 2016-07-05 Monsanto Technology Llc planta e semente de soja correspondendo a evento transgênico mon87712 e métodos para deteção das mesmas

Patent Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2004072259A2 (en) * 2003-02-11 2004-08-26 Dow Agrosciences Llc Altered fad2 and fad3 genes in brassica and the molecular marker-assisted detection thereof
WO2011060946A1 (en) * 2009-11-20 2011-05-26 Bayer Bioscience N.V. Brassica plants comprising mutant fad3 alleles
US20110151441A1 (en) * 2009-12-18 2011-06-23 Dow Agrosciences Llc Endpoint taqman methods for determining zygosity of corn comprising tc1507 events

Non-Patent Citations (3)

* Cited by examiner, † Cited by third party
Title
NOELLE A. BARKLEY ET AL, "A real-time PCR genotyping assay to detect FAD2A SNPs in peanuts (Arachis hypogaea L.)", ELECTRONIC JOURNAL OF BIOTECHNOLOGY, (20011010), vol. 14, no. 1, doi:10.2225/vol14-issue1-fulltext-12, ISSN 0717-3458 *
QIUYING HUANG ET AL, "Multiplex Fluorescence Melting Curve Analysis for Mutation Detection with Dual-Labeled, Self-Quenched Probes", PLOS ONE, (20110428), vol. 6, no. 4, doi:10.1371/journal.pone.0019206, ISSN 1932-6203, page e19206 *
SANDRA GIANCOLA ET AL, "Utilization of the three high-throughput SNP genotyping methods, the GOOD assay, Amplifluor and TaqMan, in diploid and polyploid plants", THEORETICAL AND APPLIED GENETICS, (2006), vol. 112, no. 6, pages 1115 - 1124 *

Also Published As

Publication number Publication date
HK1201076A1 (en) 2015-08-21
UA114301C2 (uk) 2017-05-25
CA2852934C (en) 2023-01-03
ES2660976T3 (es) 2018-03-26
RU2630998C2 (ru) 2017-09-15
HUE037107T2 (hu) 2018-08-28
US20200140962A1 (en) 2020-05-07
US9663832B2 (en) 2017-05-30
AU2012325990A1 (en) 2014-04-24
NO2823060T3 (enExample) 2018-07-14
WO2013059578A1 (en) 2013-04-25
EP2768984A1 (en) 2014-08-27
EP2768984B1 (en) 2018-01-10
PT2768984T (pt) 2018-04-17
RU2014120420A (ru) 2015-11-27
EP2768984A4 (en) 2015-07-01
EP3342882A1 (en) 2018-07-04
IN2014DN03017A (enExample) 2015-05-08
US20130102002A1 (en) 2013-04-25
AR088407A1 (es) 2014-05-28
RU2017128518A (ru) 2019-02-04
US20170298451A1 (en) 2017-10-19
CN104011225A (zh) 2014-08-27
PL2768984T3 (pl) 2018-07-31
CA2852934A1 (en) 2013-04-25
JP2014530624A (ja) 2014-11-20

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Owner name: CORTEVA AGRISCIENCE LLC

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