AU2010224100B2 - Reagents and methods for PCR - Google Patents

Reagents and methods for PCR Download PDF

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Publication number
AU2010224100B2
AU2010224100B2 AU2010224100A AU2010224100A AU2010224100B2 AU 2010224100 B2 AU2010224100 B2 AU 2010224100B2 AU 2010224100 A AU2010224100 A AU 2010224100A AU 2010224100 A AU2010224100 A AU 2010224100A AU 2010224100 B2 AU2010224100 B2 AU 2010224100B2
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AU
Australia
Prior art keywords
additive
primer
amplification
dabcyl
target
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Ceased
Application number
AU2010224100A
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English (en)
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AU2010224100A1 (en
Inventor
Yanwei Jia
John Rice
Nicholas Rice
Lawrence J. Wangh
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Brandeis University
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Brandeis University
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Publication of AU2010224100A1 publication Critical patent/AU2010224100A1/en
Application granted granted Critical
Publication of AU2010224100B2 publication Critical patent/AU2010224100B2/en
Ceased legal-status Critical Current
Anticipated expiration legal-status Critical

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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6806—Preparing nucleic acids for analysis, e.g. for polymerase chain reaction [PCR] assay
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C12Q1/6853—Nucleic acid amplification reactions using modified primers or templates

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  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Analytical Chemistry (AREA)
  • Biophysics (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Physics & Mathematics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
AU2010224100A 2009-03-12 2010-03-11 Reagents and methods for PCR Ceased AU2010224100B2 (en)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US20256509P 2009-03-12 2009-03-12
US61/202,565 2009-03-12
PCT/US2010/027011 WO2010105074A1 (en) 2009-03-12 2010-03-11 Reagents and methods for pcr

Publications (2)

Publication Number Publication Date
AU2010224100A1 AU2010224100A1 (en) 2011-10-27
AU2010224100B2 true AU2010224100B2 (en) 2015-10-22

Family

ID=42244601

Family Applications (1)

Application Number Title Priority Date Filing Date
AU2010224100A Ceased AU2010224100B2 (en) 2009-03-12 2010-03-11 Reagents and methods for PCR

Country Status (7)

Country Link
US (3) US9034605B2 (https=)
EP (2) EP2406394B1 (https=)
JP (1) JP5757885B2 (https=)
CN (1) CN102421918B (https=)
AU (1) AU2010224100B2 (https=)
CA (1) CA2755207A1 (https=)
WO (1) WO2010105074A1 (https=)

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US20090047673A1 (en) 2006-08-22 2009-02-19 Cary Robert B Miniaturized lateral flow device for rapid and sensitive detection of proteins or nucleic acids
US8980561B1 (en) 2006-08-22 2015-03-17 Los Alamos National Security, Llc. Nucleic acid detection system and method for detecting influenza
EP2279403B1 (en) 2008-05-05 2016-03-16 Los Alamos National Security, LLC Highly simplified lateral flow-based nucleic acid sample preparation and passive fluid flow control
AU2010224100B2 (en) * 2009-03-12 2015-10-22 Brandeis University Reagents and methods for PCR
CN103459612A (zh) * 2010-12-03 2013-12-18 布兰代斯大学 用于检测野生型群体中的核酸突变体的方法和试剂盒
CN103608467B (zh) 2011-04-20 2017-07-21 美飒生物技术公司 用于核酸的振荡扩增反应
SG11201404899VA (en) 2012-02-14 2014-10-30 Univ Cornell Method for relative quantification of nucleic acid sequence, expression, or copy changes, using combined nuclease, ligation, and polymerase reactions
US10301688B2 (en) 2013-01-23 2019-05-28 Brandeis University Reagents for improving PCR accuracy
KR102126031B1 (ko) * 2013-07-23 2020-07-08 삼성전자주식회사 유전적 변이를 함유하는 핵산 검출 방법
CN105378160B (zh) 2013-08-12 2018-04-17 伯乐生命医学产品有限公司 具有碱基配对的寡聚体的扩增报告子
WO2015038869A1 (en) * 2013-09-13 2015-03-19 Brandeis University Modified polymerase compositions, methods and kits
CA2971200A1 (en) 2014-12-19 2016-06-23 Brandeis University Mispriming prevention reagents
EP3286546B1 (en) 2015-04-24 2023-07-19 Mesa Biotech, Inc. Fluidic test cassette
EP3332024B1 (en) * 2015-08-06 2020-10-28 F.Hoffmann-La Roche Ag Target enrichment by single probe primer extension
CN108431223A (zh) 2016-01-08 2018-08-21 生物辐射实验室股份有限公司 每液滴分辨率下的多个珠
WO2017173035A1 (en) * 2016-04-01 2017-10-05 Chromacode Inc. Competitive probes for engineering signal generation
CN107541508A (zh) * 2016-06-24 2018-01-05 广州康昕瑞基因健康科技有限公司 模板‑引物核酸分子、聚合酶活性测定方法及试剂盒
CN108774639B (zh) * 2018-05-31 2023-05-30 澳門帝傑數碼基因有限公司 一种定向聚合的荧光探针pcr
EP3818170A4 (en) * 2018-07-02 2022-03-09 Swift Biosciences, Inc. Temperature controlled dna polymerase inhibitors
WO2020252399A1 (en) * 2019-06-14 2020-12-17 University Of Washington An enzymatic assay to measure long-term adherence to pre exposure prophylaxis and antiretroviral therapy
WO2020264067A1 (en) * 2019-06-25 2020-12-30 Bio-Rad Laboratories, Inc Compositions and methods for enhancing reverse transcriptase activity and/or reducing the inhibition of reverse transcriptase
WO2021168384A1 (en) * 2020-02-21 2021-08-26 Mission Bio, Inc. Enhanced detection of target nucleic acids by removal of dna-rna cross contamination
JP7209980B2 (ja) * 2020-12-11 2023-01-23 東洋紡株式会社 Ｄｎａポリメラーゼの５’→３’エキソヌクレアーゼ活性ドメインに特異的に結合する抗体
WO2023283090A1 (en) * 2021-07-06 2023-01-12 Singular Genomics Systems, Inc. Compositions and methods for detecting genetic features
CN115747328A (zh) * 2022-08-19 2023-03-07 福建师范大学 一种提高单链dna产量和改善产物比例的方法

Citations (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
WO2006044994A2 (en) * 2004-10-18 2006-04-27 Brandeis University Primers, probes and methods for nucleic acid amplification

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US4683195A (en) 1986-01-30 1987-07-28 Cetus Corporation Process for amplifying, detecting, and/or-cloning nucleic acid sequences
US4965188A (en) 1986-08-22 1990-10-23 Cetus Corporation Process for amplifying, detecting, and/or cloning nucleic acid sequences using a thermostable enzyme
US4683202A (en) 1985-03-28 1987-07-28 Cetus Corporation Process for amplifying nucleic acid sequences
US5066584A (en) 1988-09-23 1991-11-19 Cetus Corporation Methods for generating single stranded dna by the polymerase chain reaction
US5210015A (en) 1990-08-06 1993-05-11 Hoffman-La Roche Inc. Homogeneous assay system using the nuclease activity of a nucleic acid polymerase
US5994056A (en) 1991-05-02 1999-11-30 Roche Molecular Systems, Inc. Homogeneous methods for nucleic acid amplification and detection
US5338671A (en) 1992-10-07 1994-08-16 Eastman Kodak Company DNA amplification with thermostable DNA polymerase and polymerase inhibiting antibody
US5925517A (en) 1993-11-12 1999-07-20 The Public Health Research Institute Of The City Of New York, Inc. Detectably labeled dual conformation oligonucleotide probes, assays and kits
US20050242506A1 (en) 1994-07-22 2005-11-03 Shuffle Master, Inc. Poker game variation with variable size wagers and play against a pay table
US6020130A (en) 1995-06-07 2000-02-01 Nexstar Pharmaceuticals, Inc. Nucleic acid ligands that bind to and inhibit DNA polymerases
US5773258A (en) 1995-08-25 1998-06-30 Roche Molecular Systems, Inc. Nucleic acid amplification using a reversibly inactivated thermostable enzyme
AU713667B2 (en) 1996-04-12 1999-12-09 Phri Properties, Inc. Detection probes, kits and assays
US6277607B1 (en) 1999-05-24 2001-08-21 Sanjay Tyagi High specificity primers, amplification methods and kits
US7198897B2 (en) 2001-12-19 2007-04-03 Brandeis University Late-PCR
AU2004227353B2 (en) * 2003-04-01 2010-02-25 Luminex Corporation Polymerase inhibitor and method of using same
EP2806035B1 (en) * 2004-02-18 2017-09-13 Chromocell Corporation Methods and materials using signaling probes
ATE541055T1 (de) * 2004-10-18 2012-01-15 Univ Brandeis Reagenzien und verfahren zur verbesserung der reproduzierbarkeit und zur reduzierung des mispriming bei der pcr-amplifikation
AU2006269282B2 (en) * 2005-07-07 2013-10-24 Quanta Biosciences, Inc. Compositions and methods for increasing amplification efficiency
DE602006008150D1 (de) * 2006-10-12 2009-09-10 Bio Rad Pasteur Doppelsträngige Sonden zur Fluoreszenzdetektion von Nukleinsäuren
MX2009006310A (es) * 2006-12-14 2009-07-22 Novartis Ag Composiciones y metodos para tratar trastornos musculares y cardiovasculares.
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Also Published As

Publication number Publication date
EP2406394A1 (en) 2012-01-18
CN102421918B (zh) 2016-01-20
CN102421918A (zh) 2012-04-18
US9034605B2 (en) 2015-05-19
AU2010224100A1 (en) 2011-10-27
EP2703501A1 (en) 2014-03-05
JP2012520080A (ja) 2012-09-06
US20150322503A1 (en) 2015-11-12
JP5757885B2 (ja) 2015-08-05
EP2406394B1 (en) 2014-01-08
US20180002739A1 (en) 2018-01-04
US9758813B2 (en) 2017-09-12
CA2755207A1 (en) 2010-09-16
US20120088275A1 (en) 2012-04-12
WO2010105074A1 (en) 2010-09-16

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FGA Letters patent sealed or granted (standard patent)
MK14 Patent ceased section 143(a) (annual fees not paid) or expired