ZA200807948B - DNA Conformation (loop structures) in normal and abnormal gene expression - Google Patents
DNA Conformation (loop structures) in normal and abnormal gene expressionInfo
- Publication number
- ZA200807948B ZA200807948B ZA200807948A ZA200807948A ZA200807948B ZA 200807948 B ZA200807948 B ZA 200807948B ZA 200807948 A ZA200807948 A ZA 200807948A ZA 200807948 A ZA200807948 A ZA 200807948A ZA 200807948 B ZA200807948 B ZA 200807948B
- Authority
- ZA
- South Africa
- Prior art keywords
- gene expression
- normal
- abnormal gene
- loop structures
- dna conformation
- Prior art date
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6809—Methods for determination or identification of nucleic acids involving differential detection
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
- C12Q1/6886—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/136—Screening for pharmacological compounds
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/16—Primer sets for multiplex assays
Landscapes
- Chemical & Material Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Organic Chemistry (AREA)
- Health & Medical Sciences (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Engineering & Computer Science (AREA)
- Analytical Chemistry (AREA)
- Genetics & Genomics (AREA)
- Immunology (AREA)
- Molecular Biology (AREA)
- Biochemistry (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Microbiology (AREA)
- General Health & Medical Sciences (AREA)
- General Engineering & Computer Science (AREA)
- Biotechnology (AREA)
- Biophysics (AREA)
- Pathology (AREA)
- Physics & Mathematics (AREA)
- Hospice & Palliative Care (AREA)
- Oncology (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
- Chemical Kinetics & Catalysis (AREA)
- Medicines That Contain Protein Lipid Enzymes And Other Medicines (AREA)
- Saccharide Compounds (AREA)
- Investigating Or Analysing Biological Materials (AREA)
- Pharmaceuticals Containing Other Organic And Inorganic Compounds (AREA)
- Breeding Of Plants And Reproduction By Means Of Culturing (AREA)
- General Chemical & Material Sciences (AREA)
- Micro-Organisms Or Cultivation Processes Thereof (AREA)
Applications Claiming Priority (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| GBGB0603251.0A GB0603251D0 (en) | 2006-02-17 | 2006-02-17 | DNA conformation |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| ZA200807948B true ZA200807948B (en) | 2009-11-25 |
Family
ID=36142050
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| ZA200807948A ZA200807948B (en) | 2006-02-17 | 2007-02-19 | DNA Conformation (loop structures) in normal and abnormal gene expression |
Country Status (16)
| Country | Link |
|---|---|
| US (2) | US9777327B2 (de) |
| EP (1) | EP1991697B1 (de) |
| JP (1) | JP5345857B2 (de) |
| CN (1) | CN101384734B (de) |
| AT (1) | ATE519864T1 (de) |
| AU (1) | AU2007216315B2 (de) |
| CA (1) | CA2642331C (de) |
| DK (1) | DK1991697T3 (de) |
| ES (1) | ES2368767T3 (de) |
| GB (1) | GB0603251D0 (de) |
| HK (1) | HK1125416A1 (de) |
| MY (1) | MY182608A (de) |
| NO (1) | NO343718B1 (de) |
| NZ (1) | NZ571201A (de) |
| WO (1) | WO2007093819A2 (de) |
| ZA (1) | ZA200807948B (de) |
Families Citing this family (51)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| GB0603251D0 (en) | 2006-02-17 | 2006-03-29 | Isis Innovation | DNA conformation |
| WO2009092381A1 (en) | 2008-01-23 | 2009-07-30 | Herlev Hospital, Region Hovedstaden | Ykl-40 as a general marker for non-specific disease |
| GB0810051D0 (en) * | 2008-06-02 | 2008-07-09 | Oxford Biodynamics Ltd | Method of diagnosis |
| WO2010028658A1 (en) | 2008-09-15 | 2010-03-18 | Herlev Hospital, Region Hovedstaden | Ykl-40 as a marker for gastrointestinal cancers |
| US9951386B2 (en) | 2014-06-26 | 2018-04-24 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US10752949B2 (en) | 2012-08-14 | 2020-08-25 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US9567631B2 (en) | 2012-12-14 | 2017-02-14 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US11591637B2 (en) | 2012-08-14 | 2023-02-28 | 10X Genomics, Inc. | Compositions and methods for sample processing |
| US10323279B2 (en) | 2012-08-14 | 2019-06-18 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US10273541B2 (en) | 2012-08-14 | 2019-04-30 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US10584381B2 (en) | 2012-08-14 | 2020-03-10 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| CA2881685C (en) | 2012-08-14 | 2023-12-05 | 10X Genomics, Inc. | Microcapsule compositions and methods |
| US10221442B2 (en) | 2012-08-14 | 2019-03-05 | 10X Genomics, Inc. | Compositions and methods for sample processing |
| US9701998B2 (en) | 2012-12-14 | 2017-07-11 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US10533221B2 (en) | 2012-12-14 | 2020-01-14 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US9411930B2 (en) * | 2013-02-01 | 2016-08-09 | The Regents Of The University Of California | Methods for genome assembly and haplotype phasing |
| CA2900543C (en) | 2013-02-08 | 2023-01-31 | 10X Genomics, Inc. | Partitioning and processing of analytes and other species |
| EP4321628A3 (de) | 2013-05-23 | 2024-04-24 | The Board of Trustees of the Leland Stanford Junior University | Transposition in natives chromatin für persönliche epigenomik |
| CN106413896B (zh) | 2014-04-10 | 2019-07-05 | 10X基因组学有限公司 | 用于封装和分割试剂的流体装置、系统和方法及其应用 |
| JP6838969B2 (ja) | 2014-06-26 | 2021-03-03 | １０エックス ジェノミクス， インコーポレイテッド | 個々の細胞または細胞集団由来の核酸の分析方法 |
| US10526641B2 (en) | 2014-08-01 | 2020-01-07 | Dovetail Genomics, Llc | Tagging nucleic acids for sequence assembly |
| US20160122817A1 (en) | 2014-10-29 | 2016-05-05 | 10X Genomics, Inc. | Methods and compositions for targeted nucleic acid sequencing |
| US9975122B2 (en) | 2014-11-05 | 2018-05-22 | 10X Genomics, Inc. | Instrument systems for integrated sample processing |
| CN112126675B (zh) | 2015-01-12 | 2022-09-09 | 10X基因组学有限公司 | 用于制备核酸测序文库的方法和系统以及用其制备的文库 |
| WO2016134034A1 (en) | 2015-02-17 | 2016-08-25 | Dovetail Genomics Llc | Nucleic acid sequence assembly |
| KR20170119710A (ko) | 2015-02-24 | 2017-10-27 | 10엑스 제노믹스, 인크. | 표적화된 핵산 서열 커버리지 방법 |
| EP4286516A3 (de) | 2015-02-24 | 2024-03-06 | 10X Genomics, Inc. | Partitionsverarbeitungsverfahren und -systeme |
| US11807896B2 (en) | 2015-03-26 | 2023-11-07 | Dovetail Genomics, Llc | Physical linkage preservation in DNA storage |
| WO2016207647A1 (en) | 2015-06-24 | 2016-12-29 | Oxford Biodynamics Limited | Epigenetic chromosome interactions |
| SG11201803289VA (en) | 2015-10-19 | 2018-05-30 | Dovetail Genomics Llc | Methods for genome assembly, haplotype phasing, and target independent nucleic acid detection |
| SG11201804086VA (en) | 2015-12-04 | 2018-06-28 | 10X Genomics Inc | Methods and compositions for nucleic acid analysis |
| KR20180116377A (ko) | 2016-02-23 | 2018-10-24 | 더브테일 제노믹스 엘엘씨 | 게놈 어셈블리를 위한 페이징된 판독 세트의 생성 및 반수체형 페이징 |
| GB201608000D0 (en) | 2016-05-06 | 2016-06-22 | Oxford Biodynamics Ltd | Chromosome detection |
| EP3455356B1 (de) | 2016-05-13 | 2021-08-04 | Dovetail Genomics LLC | Rückgewinnung von long-range-bindungsinformationen aus konservierten proben |
| WO2017197338A1 (en) | 2016-05-13 | 2017-11-16 | 10X Genomics, Inc. | Microfluidic systems and methods of use |
| AU2017367245B2 (en) | 2016-12-01 | 2020-09-24 | Oxford BioDynamics PLC | Application of epigenetic chromsomal interactions in cancer diagnostics |
| US10011872B1 (en) | 2016-12-22 | 2018-07-03 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US10550429B2 (en) | 2016-12-22 | 2020-02-04 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US10815525B2 (en) | 2016-12-22 | 2020-10-27 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| JP7045086B2 (ja) * | 2016-12-23 | 2022-03-31 | オックスフォード バイオダイナミックス パブリック リミテッド カンパニー | 分類法 |
| WO2018140966A1 (en) | 2017-01-30 | 2018-08-02 | 10X Genomics, Inc. | Methods and systems for droplet-based single cell barcoding |
| EP4230746A3 (de) | 2017-05-26 | 2023-11-01 | 10X Genomics, Inc. | Einzelzellanalyse von transposase-zugänglichem chromatin |
| US10844372B2 (en) | 2017-05-26 | 2020-11-24 | 10X Genomics, Inc. | Single cell analysis of transposase accessible chromatin |
| CN111511930A (zh) | 2017-11-03 | 2020-08-07 | 牛津生物动力有限公司 | 通过染色体相互作用遗传调节免疫响应 |
| SG11201913654QA (en) | 2017-11-15 | 2020-01-30 | 10X Genomics Inc | Functionalized gel beads |
| US10829815B2 (en) | 2017-11-17 | 2020-11-10 | 10X Genomics, Inc. | Methods and systems for associating physical and genetic properties of biological particles |
| CN112262218A (zh) | 2018-04-06 | 2021-01-22 | 10X基因组学有限公司 | 用于单细胞处理中的质量控制的系统和方法 |
| JP2022523564A (ja) | 2019-03-04 | 2022-04-25 | アイオーカレンツ， インコーポレイテッド | 機械学習を使用するデータ圧縮および通信 |
| JP2023502944A (ja) * | 2019-11-15 | 2023-01-26 | フェーズ ジェノミクス インコーポレイテッド | 組織試料からの染色体立体構造捕捉 |
| CN114550817B (zh) * | 2022-01-25 | 2022-12-23 | 云南大学 | 基于多特征的ctcf介导染色质环预测方法 |
| CN114841294B (zh) * | 2022-07-04 | 2022-10-28 | 杭州德适生物科技有限公司 | 一种检测染色体结构异常的分类器模型训练方法及装置 |
Family Cites Families (7)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2002044719A1 (en) | 2000-11-29 | 2002-06-06 | Statens Serum Institut | A screening assay for detecting chromosome rearrangements or recombinations |
| CN1231596C (zh) * | 2001-12-27 | 2005-12-14 | 赵兴波 | 利用线粒体dna指纹进行动物遗传信息鉴定的方法 |
| CN1515692A (zh) * | 2003-01-02 | 2004-07-28 | 缪金明 | “锚定点灯”式寡核苷酸芯片的检测技术 |
| EP2295604B1 (de) | 2004-02-09 | 2015-04-08 | Thomas Jefferson University | Krebsdiagnose und Behandlung durch microRNA, die sich in der Nähe von Krebs-verbindenen Chromosom-Merkmale befinden |
| US20060015264A1 (en) | 2004-06-02 | 2006-01-19 | Mcshea Andrew | Interfering stem-loop sequences and method for identifying |
| DK1899488T3 (en) | 2005-07-04 | 2015-12-21 | Univ Erasmus Medical Ct | CHROMOSOM CONFORMATIONS "CAPTURE-ON-CHIP" (4C) -ASSAY |
| GB0603251D0 (en) | 2006-02-17 | 2006-03-29 | Isis Innovation | DNA conformation |
-
2006
- 2006-02-17 GB GBGB0603251.0A patent/GB0603251D0/en not_active Ceased
-
2007
- 2007-02-19 EP EP07712741A patent/EP1991697B1/de active Active
- 2007-02-19 AT AT07712741T patent/ATE519864T1/de not_active IP Right Cessation
- 2007-02-19 NZ NZ571201A patent/NZ571201A/en unknown
- 2007-02-19 WO PCT/GB2007/000564 patent/WO2007093819A2/en active Application Filing
- 2007-02-19 CN CN2007800057991A patent/CN101384734B/zh active Active
- 2007-02-19 US US12/279,133 patent/US9777327B2/en active Active
- 2007-02-19 AU AU2007216315A patent/AU2007216315B2/en active Active
- 2007-02-19 CA CA2642331A patent/CA2642331C/en active Active
- 2007-02-19 ES ES07712741T patent/ES2368767T3/es active Active
- 2007-02-19 DK DK07712741.3T patent/DK1991697T3/da active
- 2007-02-19 ZA ZA200807948A patent/ZA200807948B/xx unknown
- 2007-02-19 MY MYPI20083134A patent/MY182608A/en unknown
- 2007-02-19 JP JP2008554852A patent/JP5345857B2/ja active Active
-
2008
- 2008-09-17 NO NO20083957A patent/NO343718B1/no unknown
-
2009
- 2009-05-07 HK HK09104232.1A patent/HK1125416A1/xx unknown
-
2017
- 2017-08-22 US US15/683,504 patent/US11384396B2/en active Active
Also Published As
| Publication number | Publication date |
|---|---|
| CN101384734A (zh) | 2009-03-11 |
| WO2007093819A2 (en) | 2007-08-23 |
| HK1125416A1 (en) | 2009-08-07 |
| JP2009526543A (ja) | 2009-07-23 |
| ATE519864T1 (de) | 2011-08-15 |
| EP1991697A2 (de) | 2008-11-19 |
| CA2642331A1 (en) | 2007-08-23 |
| CN101384734B (zh) | 2013-10-30 |
| ES2368767T3 (es) | 2011-11-22 |
| GB0603251D0 (en) | 2006-03-29 |
| WO2007093819A3 (en) | 2007-10-04 |
| NZ571201A (en) | 2011-07-29 |
| DK1991697T3 (da) | 2011-09-19 |
| EP1991697B1 (de) | 2011-08-10 |
| NO20083957L (no) | 2008-11-14 |
| US9777327B2 (en) | 2017-10-03 |
| JP5345857B2 (ja) | 2013-11-20 |
| US20180080081A1 (en) | 2018-03-22 |
| US11384396B2 (en) | 2022-07-12 |
| US20090186352A1 (en) | 2009-07-23 |
| CA2642331C (en) | 2018-06-19 |
| AU2007216315B2 (en) | 2012-10-04 |
| MY182608A (en) | 2021-01-26 |
| AU2007216315A1 (en) | 2007-08-23 |
| NO343718B1 (no) | 2019-05-20 |
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