WO2023284249A1 - 咪唑吡嗪酮类荧光素及其制备方法 - Google Patents
咪唑吡嗪酮类荧光素及其制备方法 Download PDFInfo
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- WO2023284249A1 WO2023284249A1 PCT/CN2021/138520 CN2021138520W WO2023284249A1 WO 2023284249 A1 WO2023284249 A1 WO 2023284249A1 CN 2021138520 W CN2021138520 W CN 2021138520W WO 2023284249 A1 WO2023284249 A1 WO 2023284249A1
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K49/00—Preparations for testing in vivo
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- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07D—HETEROCYCLIC COMPOUNDS
- C07D487/00—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, not provided for by groups C07D451/00 - C07D477/00
- C07D487/02—Heterocyclic compounds containing nitrogen atoms as the only ring hetero atoms in the condensed system, not provided for by groups C07D451/00 - C07D477/00 in which the condensed system contains two hetero rings
- C07D487/04—Ortho-condensed systems
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- C09K11/00—Luminescent materials, e.g. electroluminescent or chemiluminescent
- C09K11/06—Luminescent materials, e.g. electroluminescent or chemiluminescent containing organic luminescent materials
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N21/00—Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
- G01N21/75—Systems in which material is subjected to a chemical reaction, the progress or the result of the reaction being investigated
- G01N21/76—Chemiluminescence; Bioluminescence
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N21/00—Investigating or analysing materials by the use of optical means, i.e. using sub-millimetre waves, infrared, visible or ultraviolet light
- G01N21/75—Systems in which material is subjected to a chemical reaction, the progress or the result of the reaction being investigated
- G01N21/76—Chemiluminescence; Bioluminescence
- G01N21/763—Bioluminescence
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- C09K2211/00—Chemical nature of organic luminescent or tenebrescent compounds
- C09K2211/10—Non-macromolecular compounds
- C09K2211/1018—Heterocyclic compounds
- C09K2211/1025—Heterocyclic compounds characterised by ligands
- C09K2211/1029—Heterocyclic compounds characterised by ligands containing one nitrogen atom as the heteroatom
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- C09K—MATERIALS FOR MISCELLANEOUS APPLICATIONS, NOT PROVIDED FOR ELSEWHERE
- C09K2211/00—Chemical nature of organic luminescent or tenebrescent compounds
- C09K2211/10—Non-macromolecular compounds
- C09K2211/1018—Heterocyclic compounds
- C09K2211/1025—Heterocyclic compounds characterised by ligands
- C09K2211/1044—Heterocyclic compounds characterised by ligands containing two nitrogen atoms as heteroatoms
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- C—CHEMISTRY; METALLURGY
- C09—DYES; PAINTS; POLISHES; NATURAL RESINS; ADHESIVES; COMPOSITIONS NOT OTHERWISE PROVIDED FOR; APPLICATIONS OF MATERIALS NOT OTHERWISE PROVIDED FOR
- C09K—MATERIALS FOR MISCELLANEOUS APPLICATIONS, NOT PROVIDED FOR ELSEWHERE
- C09K2211/00—Chemical nature of organic luminescent or tenebrescent compounds
- C09K2211/10—Non-macromolecular compounds
- C09K2211/1018—Heterocyclic compounds
- C09K2211/1025—Heterocyclic compounds characterised by ligands
- C09K2211/1059—Heterocyclic compounds characterised by ligands containing three nitrogen atoms as heteroatoms
Definitions
- the invention belongs to the technical field of chemical industry, and in particular relates to an imidazole pyrazinone fluorescein with a push-pull electronic structure and a preparation method thereof.
- Bioluminescence imaging is a new optical imaging technology in recent years. Compared with fluorescence imaging, bioluminescent imaging is characterized by high sensitivity and quantitative analysis. As an in vivo reporter source, bioluminescence does not require excitation light, and emits light through the specific action of substrates and enzymes, and the animal itself does not emit light, which makes the background of the bioluminescent signal extremely low and can obtain a high signal-to-noise ratio. In addition, the level of fluorescent signal depends on the number of luminescent cells and the intensity of excitation light. The absorption of light by biological tissues makes it difficult to measure the fluorescence intensity.
- the detected bioluminescence intensity is linearly related to the number of labeled targets.
- bioluminescence can be quantitatively analyzed.
- the advantages of bio-imaging technology make it possible to establish various tumor models in the study of tumor diseases (inserting the luciferase gene into random sites in the chromatin of tumor cells and then transferring it into animals), which can be used for real-time observation under near non-invasive conditions Proliferation, growth, and metastasis of tumor cells in vivo), antitumor drug research (labeling tumor cells with luciferase, by giving different doses, different administration times, and different administration routes to mice inoculated with tumors, observe and formulate appropriate Dosage form and medication time, real-time evaluation of the therapeutic effects of various treatment methods), cell markers (labeling immune cells, observing the recognition and killing functions of immune cells on tumor cells, and evaluating the immune specificity, proliferation, migration and other functions of immune cells), It has
- Bioluminescence belongs to the category of chemiluminescence, which is a luminescent phenomenon accompanied by the luciferase-luciferin enzymatic reaction.
- the two key factors in the in vivo optical imaging technology based on bioluminescence are luciferase and luciferin.
- luciferase a luminescent phenomenon accompanied by the luciferase-luciferin enzymatic reaction.
- luciferase and luciferin luciferase and luciferin.
- common bioluminescence is mainly divided into three categories: insect luciferases (firefly luciferase FLuc), bacterial luciferases (LuxAB) and marine luciferases (such as Renilla luciferase).
- Enzyme RLuc Enzyme RLuc-like bioluminescent phenomena, among which bacterial luciferase is mostly used in the research of bacterial infection and antibiotic drugs, insect luciferase and marine luciferase are suitable for in vivo bioluminescence imaging technology of mammals.
- bioluminescence based on firefly luciferase.
- the enzymatic reaction between this type of enzyme and the corresponding substrate requires the participation of adenosine triphosphate (ATP) and magnesium ion Mg 2+ as co-factors in addition to oxygen molecules.
- ATP adenosine triphosphate
- magnesium ion Mg 2+ magnesium ion Mg 2+
- this type of bioluminescent technology has the following technical problems: (1) most of the reported maximum emission wavelengths are in the range of 400-550 nm, and the tissue penetration depth is limited; (2) the bulk structure of coelenterazine fluorescein ( imidazopyrazinone) is easy to ring-open and produces autofluorescence; (3) poor water solubility cannot meet the dosage requirements of large-volume animal experiments. Therefore, increasing the tissue penetration depth of the light signal, redshifting the bioluminescent wavelength to the deep red/near-infrared region, increasing the stability of the substrate molecule, meeting the requirements of high signal-to-noise ratio for in vivo imaging, and improving the fluorescein substrate Water solubility is very necessary.
- Intramolecular charge transfer is an effective method that can redshift the molecular luminescent spectrum.
- the wavelength red-shift of imidazopyrazinone-based fluorescein bioluminescence increases the tissue penetration depth of in vivo imaging, improves molecular stability, and inhibits background interference caused by autoxidative luminescence.
- hydrophilic groups to increase its water solubility, it can meet the requirements of large-area imaging.
- the new water-soluble and red-shifted imidazole pyrazinone luciferin not only enriches the structure-activity relationship of luciferin-luciferase interaction, but also provides better application prospects for bioluminescence imaging technology in the field of medical research.
- the present invention provides an imidazopyrazinone fluorescein with a push-pull electronic structure and a preparation method thereof.
- the embodiment of the present invention provides a compound represented by formula (I), or its tautomer or salt:
- R1 is benzyl or a benzyl-containing group
- R2 is an electron - donating group
- R3 is an electron-deficient group
- R is one of the following structures :
- R3 is one of the following structures:
- the embodiment of the present invention also provides a method for preparing the above-mentioned compound, or its tautomer or salt, comprising the following steps:
- Step 1 under the protection of nitrogen, the compound 2-amino-3-iodo-5-bromopyrazine and the electron-deficient group pinacol borate are dissolved in the first solvent, in the presence of a catalyst, and the second solvent is added, Reacted at 110°C for 2 hours, separated and purified after cooling to obtain intermediate 1;
- Step 2 Under the protection of nitrogen, the above-mentioned intermediate 1 and the electron-donating group pinacol borate are dissolved in the first solvent, in the presence of a catalyst, and the second solvent is added, reacted at 110°C for 12 hours, separated and purified after cooling , to obtain intermediate 2.
- Step 3 Under the protection of nitrogen, add intermediate 2 to the third solvent to dissolve, add concentrated hydrochloric acid dropwise, add 3-phenyl-1,1-diethoxyacetone at the same time, react at 80°C for 8 hours, and separate after cooling Purify to obtain the target product.
- the present invention also provides a chemiluminescence method, which uses the above-mentioned compound, or its tautomer or salt as a substrate, and the luminescence wavelength is in the range of 576-652nm.
- the beneficial effects of the present invention are: 1) The imidazole pyrazinone fluorescein synthesized by the present invention is simple to prepare, the reaction conditions are mild, and the yield is relatively good. , has a certain hydrophilicity; 2) the imidazole pyrazinone fluorescein synthesized by the present invention can be ring-opened with high-brightness luminescence under alkaline catalysis in DMSO solution, and has the property of chemiluminescence; 3) the synthetic fluorescein of the present invention
- the imidazopyrazinone fluorescein is a coelenterazine fluorescein substrate, and under the catalysis of luciferase, bioluminescence occurs when the ring is opened, and the luminescence wavelength is red-shifted, which is of great significance for the application of bioluminescence imaging in vivo research; 4) Under the same test conditions, the chemiluminescent brightness of the synthesized substrate is comparable to that of the reported substrate reference DTZ under
- Fig. 1 is the synthetic route of imidazole pyrazinone compound in the embodiment of the present invention
- Fig. 2 is the normalized chemiluminescent spectrum of imidazole pyrazinone fluorescein (1-12) structural formula in the embodiment of the present invention
- Fig. 3 is the bioluminescent spectrum of imidazole pyrazinone fluorescein (9) in the example of the present invention.
- An embodiment of the present invention provides an imidazole pyrazinone fluorescein compound with a push-pull electronic structure or a tautomer or salt thereof, which has the following general formula:
- R 1 is benzyl or a group containing benzyl
- R 2 is an electron-donating group (EDG)
- R 3 is an electron-deficient group (EWG).
- the above-mentioned compounds can be used as luciferase substrates for bioluminescent imaging, which have the property of alkaline catalysis in DMSO solution or under the catalysis of luciferase to open the imidazolone structure and emit light.
- the glow of the rings ranges from green to red.
- the substituted electron-donating/deficiency groups contain N, O, and F atoms, which are easy to form hydrogen bonds with water molecules and help to increase the water solubility of the molecules.
- R is one of the following structures:
- R3 is one of the following structures:
- the synthetic route includes the following three steps: Step 1: under nitrogen protection, compound 2-amino-3-iodo-5-bromopyrazine Dissolve the pinacol borate with the electron deficient group (EWG, R 3 in formula I) in the first solvent, in the presence of a catalyst, and add the second solvent, react at 110°C for 2 hours, separate and purify after cooling , to obtain intermediate 1
- Step 1 under nitrogen protection, compound 2-amino-3-iodo-5-bromopyrazine
- EWG, R 3 in formula I electron deficient group
- Step 2 Under the protection of nitrogen, the above-mentioned intermediate 1 and the electron-donating group (EDG, R 2 in formula I) pinacol borate are dissolved in the first solvent, in the presence of a catalyst, and the second solvent is added , reacted at 110°C for 12 hours, separated and purified after cooling to obtain intermediate 2
- EDG electron-donating group
- Step 3 Under the protection of nitrogen, add intermediate 2 to the third solvent to dissolve, add concentrated hydrochloric acid dropwise, and add 3-phenyl-1,1-diethoxyacetone at the same time React at 80°C for 8 hours, separate and purify after cooling to obtain the target product, namely the compound of the above general formula I.
- the above-mentioned first solvent is 1,4-dioxane (1,4-Dioxane)
- the second solvent is potassium carbonate solution
- the third solvent is ethanol
- the catalyst is bis(triphenylphosphine) dichloride Palladium, wherein 1,4-dioxane and ethanol are reaction solvents, while providing a polar environment for the reaction, its boiling point ensures the reaction temperature.
- Embodiment 1 Preparation of 2-amino-3-iodo-5-bromopyrazine
- the pinacol borate that concrete uses is following structure:
- the target product information is as follows (the corresponding structural formula is as follows):
- table 1 has summarized the spectral properties of its chemiluminescence and photoluminescence, as can be seen from the figure and the table, by Modification of C6 and C8 electron-donating/deficient groups, the maximum emission wavelength is distributed in the green to red light region, and the fluorescence is obviously red-shifted, indicating that the push-pull electronic structure can effectively adjust the imidazole that can be used as a coelenterazine fluorescein substrate Photophysical properties of the ring-opening luminescence of pyrazinone-type fluoresceins.
- Bioluminescent properties Select imidazole pyrazinone luciferin (9) as the luciferin substrate, and use a microplate reader to test its bioluminescent properties with the new luciferase NanoLuc in a 96-well plate.
- Figure 3 shows the enzyme-substrate It can be seen from the figure that the luminescence is obviously red-shifted, indicating that the push-pull electronic structure has an obvious regulation effect on the bioluminescent properties of the luciferin substrate.
- the red-shifted emission wavelength of the novel luciferase-luciferin substrate interaction will help to promote the application of bioluminescent imaging in the biomedical field.
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- Life Sciences & Earth Sciences (AREA)
- Biochemistry (AREA)
- Plasma & Fusion (AREA)
- Analytical Chemistry (AREA)
- Chemical Kinetics & Catalysis (AREA)
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Abstract
Description
Claims (7)
- 一种制备如权利要求1-3中任一项所述的化合物,或其互变异构体或盐的方法,包括如下步骤:步骤一:在氮气保护下,化合物2-氨基-3-碘-5-溴吡嗪与缺电子基团频哪醇 硼酸酯溶解在第一溶剂中,在存在催化剂,且加入第二溶剂,在110℃反应,冷却后分离提纯,得到中间体1;步骤二:在氮气保护下,上述中间体1与给电子基团频哪醇硼酸酯溶解在第一溶剂中,在存在催化剂,且加入第二溶剂,110℃反应,冷却后分离提纯,得到中间体2;步骤三:在氮气保护下,将中间体2加入第三溶剂中溶解,滴加浓盐酸,同时加入3-苯基-1,1-二乙氧基丙酮,80℃反应,冷却后分离提纯,得到目标产物。
- 如权利要求4所述的方法,其特征在于,所述第一溶剂为1,4-二氧六烷,第二溶剂为碳酸钾溶液,第三溶剂为乙醇。
- 如权利要求4或5所述的方法,其特征在于,所述催化剂为二(三苯基膦)二氯化钯。
- 一种化学发光的方法,采用如权利要求1-3中任一项所述的化合物,或其互变异构体或盐作为底物,且发光的波长在576-652nm范围。
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| CN202110791007.XA CN115611900B (zh) | 2021-07-13 | 2021-07-13 | 咪唑吡嗪酮类荧光素及其制备方法 |
| CN202110791007.X | 2021-07-13 |
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| WO2023284249A1 true WO2023284249A1 (zh) | 2023-01-19 |
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Cited By (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2025137564A1 (en) * | 2023-12-20 | 2025-06-26 | Promega Corporation | Coelenterazine analogues |
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| Publication number | Priority date | Publication date | Assignee | Title |
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| WO2025084165A1 (ja) * | 2023-10-18 | 2025-04-24 | 国立研究開発法人産業技術総合研究所 | 抗体の変性状態の評価方法 |
Citations (3)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US8642281B2 (en) * | 2010-04-06 | 2014-02-04 | Jnc Corporation | Coelenterazine analogues and coelenteramide analogues |
| US10202584B2 (en) * | 2016-09-01 | 2019-02-12 | The Regents Of The University Of California | Red-shifted luciferase-luciferin pairs for enhanced bioluminescence |
| WO2020176755A1 (en) * | 2019-02-27 | 2020-09-03 | University Of Virginia Patent Foundation | Atp-independent bioluminescent reporter variants to improve in vivo imaging |
-
2021
- 2021-07-13 CN CN202110791007.XA patent/CN115611900B/zh active Active
- 2021-12-15 WO PCT/CN2021/138520 patent/WO2023284249A1/zh not_active Ceased
Patent Citations (3)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US8642281B2 (en) * | 2010-04-06 | 2014-02-04 | Jnc Corporation | Coelenterazine analogues and coelenteramide analogues |
| US10202584B2 (en) * | 2016-09-01 | 2019-02-12 | The Regents Of The University Of California | Red-shifted luciferase-luciferin pairs for enhanced bioluminescence |
| WO2020176755A1 (en) * | 2019-02-27 | 2020-09-03 | University Of Virginia Patent Foundation | Atp-independent bioluminescent reporter variants to improve in vivo imaging |
Non-Patent Citations (2)
| Title |
|---|
| TAMAKI SHOTA, KITADA NOBUO, KIYAMA MASAHIRO, FUJII RIKA, HIRANO TAKASHI, KIM SUNG BAE, MAKI SHOJIRO: "Color-tunable bioluminescence imaging portfolio for cell imaging", SCIENTIFIC REPORTS, vol. 11, no. 1, 1 January 2021 (2021-01-01), pages 1 - 10, XP093024005, DOI: 10.1038/s41598-021-81430-1 * |
| YEH HSIEN-WEI, XIONG YING, WU TIANCHEN, CHEN MINGHAI, JI AO, LI XINYU, AI HUI-WANG: "ATP-Independent Bioluminescent Reporter Variants To Improve in Vivo Imaging", ACS CHEMICAL BIOLOGY, vol. 14, no. 5, 17 May 2019 (2019-05-17), pages 959 - 965, XP093023997, ISSN: 1554-8929, DOI: 10.1021/acschembio.9b00150 * |
Cited By (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO2025137564A1 (en) * | 2023-12-20 | 2025-06-26 | Promega Corporation | Coelenterazine analogues |
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| CN115611900B (zh) | 2024-04-26 |
| CN115611900A (zh) | 2023-01-17 |
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