WO2020138761A1 - Chimeric virus of porcine reproductive and respiratory syndrome virus, and vaccine using same - Google Patents

Chimeric virus of porcine reproductive and respiratory syndrome virus, and vaccine using same Download PDF

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WO2020138761A1
WO2020138761A1 PCT/KR2019/017319 KR2019017319W WO2020138761A1 WO 2020138761 A1 WO2020138761 A1 WO 2020138761A1 KR 2019017319 W KR2019017319 W KR 2019017319W WO 2020138761 A1 WO2020138761 A1 WO 2020138761A1
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virus
lmy
nucleic acid
acid sequence
polynucleotide
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PCT/KR2019/017319
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French (fr)
Korean (ko)
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조선희
박창훈
백종혁
차상호
강석진
유수화
조인수
Original Assignee
주식회사 바이오포아
대한민국(농림축산식품부 농림축산검역본부장)
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Priority claimed from KR1020190145389A external-priority patent/KR102335864B1/en
Application filed by 주식회사 바이오포아, 대한민국(농림축산식품부 농림축산검역본부장) filed Critical 주식회사 바이오포아
Priority to CN201980093073.0A priority Critical patent/CN113544140A/en
Publication of WO2020138761A1 publication Critical patent/WO2020138761A1/en

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    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K39/00Medicinal preparations containing antigens or antibodies
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61KPREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
    • A61K39/00Medicinal preparations containing antigens or antibodies
    • A61K39/12Viral antigens
    • AHUMAN NECESSITIES
    • A61MEDICAL OR VETERINARY SCIENCE; HYGIENE
    • A61PSPECIFIC THERAPEUTIC ACTIVITY OF CHEMICAL COMPOUNDS OR MEDICINAL PREPARATIONS
    • A61P31/00Antiinfectives, i.e. antibiotics, antiseptics, chemotherapeutics
    • A61P31/12Antivirals
    • A61P31/14Antivirals for RNA viruses
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/005Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from viruses
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N15/00Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
    • C12N15/09Recombinant DNA-technology
    • C12N15/11DNA or RNA fragments; Modified forms thereof; Non-coding nucleic acids having a biological activity
    • C12N15/62DNA sequences coding for fusion proteins
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N7/00Viruses; Bacteriophages; Compositions thereof; Preparation or purification thereof

Definitions

  • the present invention relates to a chimeric virus of porcine genital and respiratory syndrome virus (PRRSV) that can be used as a vaccine, and the chimeric virus of the present invention has lower pathogenicity and higher safety than the parent strain.
  • PRRSV chimeric virus of the present invention improves the secretion of neutralizing antibodies related to cross-immunity, and can provide a vaccine that can effectively protect porcine genital and respiratory syndrome.
  • PRRS Porcine Reproductive and Respiratory Syndrome
  • PRRS The viral disease was first discovered in the United States in 1987, then in Europe, and was identified in Asia in the early 1990s. So far, PRRS has been characterized by endemic disease in swine countries and has spread worldwide, causing huge economic losses every year.
  • the pathogens responsible for PRRS are the PRRS virus belonging to the genus Arterivirus, Arteriviridae, and Nidovirales.
  • the PRRS virus has a positive-sense single stranded RNA genome and is about 15.4 kilobase in size.
  • the genome of the PRRS virus has 9 ORFs (Conzelmann et al., 1993; Meulenberg et al., 1993).
  • ORF1a and ORF1b encoding non-structural proteins (NSPs) account for about 80% of viral genomes (Bautista et al., 2002; Meulenberg et al., 1993; Snijder and Meulenberg, 1998, 2001) .
  • NSP1-alpha, NSP-1 beta, NSP2 to NSP8 are located in ORF1a, and NSP9 to NSP12 are located in ORF1b among the non-structural proteins.
  • the glycosylated structural proteins GP2, GP3, GP4, GP5, non-glycosylated membrane (Membrane, M) protein, and nucleocapsid (N) protein are encoded by ORF2-7, which accounts for the remaining 20%.
  • the minor structural proteins GP2, GP3, and GP4 form heterotrimers, which act when viruses enter the host cell.
  • the major structural proteins, GP5, M form heterodimers to increase the infectivity of the virus.
  • PRRS virus is highly mutated due to the nature of the RNA virus, so there are many differences between the viruses.
  • PRRS virus is largely divided into North American and European. Type I representing the European type (Lelystad virus, LV) and Type II representing the North American strain ATCC VR2332 (for genome sequence of VR2332, refer to GenBank accession number AY150564) (Murtaugh et al., Arch Virol. 1995; 140:1451-1460).
  • the current attenuated vaccine can be produced only through successive passages of 100 to 200 or more passages in cell lines of other animal species, so there is a problem that the development period is long and the efficacy and safety are difficult to be guaranteed. Because of this, a standard mutant-based vaccine is produced for each, but it is not effectively preventing PRRS because of its poor cross-defense ability.
  • the present invention relates to a chimeric virus of porcine genital and respiratory syndrome virus (PRRSV) that has low pathogenicity, high stability, and improved secretion of neutralizing antibodies, a vaccine comprising the same, and a method for manufacturing the same.
  • PRRSV porcine genital and respiratory syndrome virus
  • the chimeric virus is
  • nucleic acid sequence of ORF1a and ORF1b derived from the LMY ver2 mutant strain of accession number KCTC 13394BP or a nucleic acid sequence having 70% or more sequence homology with the nucleic acid sequence while maintaining functional equivalence thereto, and
  • the present invention relates to a chimera virus of porcine reproductive and respiratory syndrome (PRRS) virus that can be used as a vaccine.
  • PRRS porcine reproductive and respiratory syndrome
  • the PRRSV chimeric virus of the present invention is attenuated more than the parent strain, and thus has low pathogenicity and high stability, and significantly improves the immunity of pigs by improving the secretion of neutralizing antibodies capable of cross-immunization. Therefore, it can be used as a vaccine for effective prevention and treatment of PRRS disease.
  • attenuated virus refers to a non-toxic virus that is capable of eliciting an immune response in a target mammal without causing clinical signs of PRRS disease, and is also an attenuated virus infected and attenuated virus It may also mean that the incidence of clinical signs is lowered in animals that have not been dosed with, or that the severity of the signs is reduced compared to "control" animals infected with the non-attenuated PRRS virus.
  • the term “reduced/reduced” refers to a reduction of at least 10%, preferably 25%, more preferably 50%, most preferably 100% or more compared to the control group defined above.
  • Vaccine composition as used herein may be a PRRS chimeric virus or any immunogenic fragment or fraction thereof, preferably an attenuated PRRS chimeric virus, such as the PRRS chimeric virus of the present invention. This causes the host's “immunological response” to be a cellular and/or antibody-mediated immune response to PRRSV. It is preferred that the vaccine composition is capable of conferring preventive immunity against PRRSV infection and clinical signs associated therewith.
  • immune response refers to any cell- and/or antibody-mediated immune response to a chimeric virus or vaccine administered to an animal receiving the PRRSV chimeric virus of the present invention, or a vaccine composition comprising the same.
  • an “immune response” includes, but is not limited to, one or more of the following effects: antibodies, B cells, helper T cells specifically directed against antigens or antigens included in the composition or vaccine. , Production or activation of inhibitor T cells and/or cytotoxic T cells and/or ⁇ T cells.
  • the host exhibit a therapeutic or prophylactic immunological response such that the resistance to new infection is improved and/or the clinical severity of the disease is reduced compared to a control group that has not been administered an immunogenic composition or vaccine.
  • This prevention will be evidenced by the lack of symptoms associated with the host infections described above, as well as a decrease in frequency or severity, as well.
  • pigs As used herein, “pigs”, “pigs” and “pigs” may be used interchangeably.
  • Vaccinating means administering the PRRSV chimeric virus described herein or a vaccine comprising it before exposure to PRRS disease.
  • Prevent or “prophylaxis” means that as a result of receiving the PRRSV virus of the present invention or a vaccine composition comprising the same, the clinical incidence of PRRS, the severity or frequency of symptoms decreases.
  • the decrease in severity or frequency is a result of comparing the PRRSV chimeric virus of the present invention or a vaccine composition comprising the same with an animal or group of animals that has not been administered.
  • the animal is preferably a pig.
  • nucleotide sequence of the present specification has been described based on DNA nucleotides, and when the type of polynucleotide is RNA, a sequence in which all or some thymine (T) in the nucleotide sequence is substituted with uracil (U) it means.
  • a specific nucleotide sequence and/or amino acid includes the sequence, essentially comprising the sequence, and/or comprising all of the sequence, and may be used by appropriate substitution as necessary. Can.
  • the present invention provides a chimeric virus attenuated against swine genital and respiratory syndrome (PRRSV), a viral disease affecting pigs.
  • PRRSV swine genital and respiratory syndrome
  • the present invention provides a polynucleotide comprising the structure of structural formula 1:
  • [X] is a nucleic acid sequence of the NSP1 gene (NSP1-alpha gene and NSP1-beta gene) of the LMY ver2 mutant strain having accession number KCTC 13394BP, or a sequence of 70% or more within a range in which functions equivalent to the nucleic acid sequence are maintained.
  • nucleic acid sequence having homology including, for example, a nucleic acid sequence of the NSP1 gene of the LMY ver2 variant strain or a nucleic acid sequence having 70% or more sequence homology within a range in which functions equivalent to the nucleic acid sequence are maintained
  • the nucleic acid sequence of the gene of the ORF1a and ORF1b regions of the LMY ver2 variant strain having the number 13394BP or the nucleic acid sequence of the gene of the genes of the ORF1a and ORF1b regions is 70% or more sequence homology
  • [Y] is accession number KCTC 13393BP It is a nucleic acid sequence having a sequence homology of 70% or more within a range in which the gene nucleic acid sequence of the ORF2 to ORF7 region of the BP2017-2 mutant strain having or a function equivalent to the nucleic acid sequence is maintained.
  • the "equivalent function” may mean the same or similar function in qualitative (active) and/or quantitative (level) with the desired function.
  • the amino acid sequence of the protein encoded by the gene may be the same as the amino acid sequence of the protein encoded by the wild type gene.
  • the [X] in the nucleic acid sequence of the NSP1 gene consisting of the nucleotide sequence of SEQ ID NO: 11, all kinds of points that occur within the range in which the amino acid sequence of the NSP1 protein encoded by the NSP1 gene remains the same It may include a mutation (silent mutation), for example, can be freely selected and used within a target range for lowering the CBP level of the NSP1 gene.
  • [X] in the nucleic acid sequence of the NSP1 gene consisting of the nucleotide sequence of SEQ ID NO: 11, position 222, position 225, position 237, position 240, position 252, position 306, position 309 Position, Position 312, Position 315, Position 324, Position 327, Position 330, Position 333, Position 336, Position 339, Position 342, Position 345, Position 357, Position 363, Position 366, Position 378, Position 379, Position 381, Position 393, Position 396, Position 543, Position 546, Position 549, Position 555, Position 558, Position 561, 573 Position, Position 579, Position 582, Position 588, Position 612, Position 618, Position 621, Position 627, Position 633, Position 639, Position 654, Position 673, Position 675, Position 678, Position 681, Position 684, Position 705, Position 708, Position 729, Position 735, Position 738, Position 741, Position 744, Position 747, Position 771, Position 786 Position,
  • G is substituted at position 222 by C, and C is substituted at position 225 by A, 237 Variation in which position T is substituted by C, mutation in position 240 is replaced by T, mutation in position 252 is substituted by C, mutation in position 306 is substituted by C, and mutation in position 309 T is substituted with C, G at position 312 is substituted with A, C at position 315 is substituted with A, T at position 324 is substituted with C, C at position 327 is G substitution at position 330, G at position 330, A substitution, C at position 333, T substitution, C at position 336 at G, G substitution, T at position 339 as C Substituted mutation, mutation in which A at position 342 is substituted by T, mutation in which T at position 345 is substituted by A, mutation in which A at position 357 is substituted by G, substitution at T at position 363 is
  • the [X] is the nucleic acid sequence of the NSP1 gene (SEQ ID NO: 12) and/or NSP1-beta (SEQ ID NO: 1; 5'terminal 609 base site of SEQ ID NO: 12) with the LMY ver2 variant having accession number 13394BP, Or 70% or more, 75% or more, 80% or more, 85% or more, 90% or more, 95% or more, 96% or more, 97% or more, 98% or more, 99 within the range of maintaining the function equivalent to the nucleic acid sequence % Or greater than 99.5% sequence homology.
  • the [Y] is 70% or more, 75% or more, 80% or more within the range of maintaining the gene nucleic acid sequence of the ORF2 to ORF7 region of the BP2017-2 mutant strain having accession number KCTC 13393BP or equivalent function to the sequence, It may be a nucleic acid sequence having a sequence homology of 85% or more, 90% or more, 95% or more, 96% or more, 97% or more, 98% or more, 99% or more, or 99.5% or more.
  • [A]n may be further included at the 3'end of [Y] of Structural Formula 1.
  • the n is the number of nucleotides containing the base A, may be an integer of 10 to 100.
  • 10 to 80, 10 to 70, 10 to 60, 10 to 50, 10 to 40, 10 to 30, 15 to 80, 15 to 70, 15 to 60, 15 to 50, 15 to 40, 15 to 30 , 20 to 30, may be an integer of 20 to 26.
  • the polynucleotide may be RNA, reverse transcripts of the RNA (DNA), or a combination thereof.
  • the polynucleotide may function as a genome of the PRRSV chimeric virus.
  • a chimeric virus of porcine genital respiratory syndrome virus comprising a polynucleotide having the structure of Structural Formula 1.
  • the genome of the PRRSV chimeric virus may be DNA or RNA, and preferably RNA.
  • the [X] corresponds to the NSP1 gene region, including NSP1-beta of the LMY ver2 mutant with accession number 13394BP, and may be a gene fragment obtained by treating the genome of the LMY ver2 mutant with restriction enzymes AscI and PacI. For example, 70% or more, 75% or more, 80% or more, 85% or more, 90% or more, 95 within a range that maintains the function equivalent to the nucleic acid sequence of SEQ ID NO: 1 and/or SEQ ID NO: 12, or the base sequence % Or more, 96% or more, 97% or more, 98% or more, 99% or more, or 99.5% or more.
  • the [Y] corresponds to the ORF2 to ORF7 region of the BP2017-2 mutant strain having accession number KCTC 13393BP, and may be a gene fragment obtained by treating the genome of the BP2017-2 mutant strain with restriction enzymes AscI and PacI, for example, a sequence 70% or more, 75% or more, 80% or more, 85% or more, 90% or more, 95% or more, 96% or more, 97% or more, 98 within a range that maintains the nucleic acid sequence of No. 2 or equivalent function to the sequence % Or more, 99% or more, or 99.5% or more.
  • the structural formula 1 is 70% or more, 75% or more, 80% or more, 85% or more, 90% or more, 95% or more within a range maintaining the function equivalent to the nucleic acid sequence of SEQ ID NO: 4 or the nucleic acid sequence , 96% or more, 97% or more, 98% or more, 99% or more, or 99.5% or more.
  • it may be a nucleic acid sequence of SEQ ID NO: 4.
  • RNA polynucleotide (RNA) provided herein may include a nucleic acid sequence in which T is substituted by U among the sequences set forth in SEQ ID NOs: 1 to 4.)
  • the present invention provides a PRRSV chimeric virus comprising the polynucleotide of structural formula 1 as a genome.
  • the PRRSV chimeric virus is 1 to 80 passages, 1 to 70 passages, 1 to 60 passages, 1 to 50 passages, 1 to 40 passages, 1 to 30 passages, 1 to 20 passages, or 1 to 10 passage cultured progeny viruses It may be included.
  • [X] is the nucleic acid sequence of the NSP1 gene and/or NSP1-beta of the LMY ver2 variant with accession number 13394BP or a nucleic acid sequence having 70% or more sequence homology with the nucleic acid sequence
  • [Y] is the accession The gene nucleic acid sequence of the ORF2 to ORF7 region of the BP2017-2 variant strain having the number KCTC 13393BP or a nucleic acid sequence having 70% or more sequence homology with the nucleic acid sequence.
  • the [X] is 70% or more, 75% or more, 80% or more, 85% or more, 90% or more of the nucleic acid sequence of the NSP1 gene and/or NSP1-beta of the LMY ver2 mutant with accession number 13394BP or the nucleic acid sequence. Or more, 95%, 96%, 97%, 98%, 99%, or 99.5% or more nucleic acid sequences.
  • the [Y] is 70% or more, 75% or more, 80% or more, 85% or more, 90% or more with the gene nucleic acid sequence or the nucleic acid sequence of the ORF2 to ORF7 region of the BP2017-2 variant strain having accession number KCTC 13393BP , 95%, 96%, 97%, 98%, 99%, or 99.5% or more nucleic acid sequences.
  • [A]n may be further included at the 3'end of [Y] of Structural Formula 1.
  • the n is the number of nucleotides containing the base A, may be an integer of 10 to 100, for example, 10 to 80, 10 to 70, 10 to 60, 10 to 50, 10 to 40, 10 to 30, 15 to 80 , 15 to 70, 15 to 60, 15 to 50, 15 to 40, 15 to 30, 20 to 30, may be an integer of 20 to 26.
  • the polynucleotide may be RNA, reverse transcripts of the RNA (DNA), or a combination thereof.
  • the polynucleotide may function as a genome of the PRRSV chimeric virus.
  • another example of the present invention provides a chimeric virus of porcine genital respiratory syndrome virus (PRRSV) comprising a polynucleotide having the structure of Structural Formula 1.
  • PRRSV porcine genital respiratory syndrome virus
  • the genome of the PRRSV chimeric virus may be DNA or RNA, and preferably RNA.
  • the [X] corresponds to the NSP1 gene region, including NSP1-beta of the LMY ver2 mutant with accession number 13394BP, and may be a gene fragment obtained by treating the genome of the LMY ver2 mutant with restriction enzymes AscI and PacI.
  • the nucleic acid sequence of SEQ ID NO: 1 or the nucleic acid sequence and 70% or more, 75% or more, 80% or more, 85% or more, 90% or more, 95% or more, 96% or more, 97% or more, 98% or more It may be a nucleic acid sequence having a sequence homology of 99% or more, or 99.5% or more.
  • the [Y] corresponds to the ORF2 to ORF7 region of the BP2017-2 mutant strain having accession number KCTC 13393BP, and may be a gene fragment obtained by treating the genome of the BP2017-2 mutant strain with restriction enzymes AscI and PacI, for example, a sequence The nucleic acid sequence of No. 2 or 70% or more, 75% or more, 80% or more, 85% or more, 90% or more, 95% or more, 96% or more, 97% or more, 98% or more, 99% or more with the nucleic acid sequence, Or it may include a nucleic acid sequence having a sequence homology of 99.5% or more.
  • the structural formula 1 is 70% or more, 75% or more, 80% or more, 85% or more, 90% or more, 95% or more, 96% or more, 97% or more of the nucleic acid sequence of SEQ ID NO: 4 or the nucleic acid sequence , 98% or more, 99% or more, or 99.5% or more.
  • it may be a nucleic acid sequence of SEQ ID NO: 4.
  • PRRSV chimeric virus comprising a nucleic acid sequence comprising the polynucleotide of SEQ ID NO: 4 as a genome, which was named LMY+BP2017.
  • the LMY+BP2017 virus may be a virus having accession number KCTC 13394BP.
  • the substituted variant may be a PRRSV variant strain comprising NSP1-beta.
  • the nucleotide sequence substituted in the nucleotide sequence of the gene encoding NSP1 and/or NSP1-beta of the LMY strain may be selected using a known SAVE (Synthetic Attenuated Virus Engineering) program, preferably, the present inventors It may be selected using the developed SAVE program. Specifically, the genetically safe NSP1 region in the genome of the parent strain LMY was analyzed by the SAVE program developed by the present inventors, and selected or substituted for a part or all of the nucleotide sequence showing a relatively high Codon Pair Bias (CPB). It may be a base sequence deoptimized.
  • SAVE Synthetic Attenuated Virus Engineering
  • the SAVE program can be used to quantify CPB, which is a bias caused by interaction when viral gene codons are arranged in pairs, using a computer algorithm, and the proliferation of the virus is reduced when the CPB value is deoptimized, and attenuated.
  • CPB is a bias caused by interaction when viral gene codons are arranged in pairs
  • the proliferation of the virus is reduced when the CPB value is deoptimized, and attenuated.
  • Codon Silent mutation according to the Pair Deoptimization principle can produce an attenuated LMY ver2 mutant used in the preparation of the chimeric virus of the present invention.
  • the LMY ver2 mutant may include a gene encoding the NSP1-beta protein consisting of the nucleotide sequence of SEQ ID NO: 6, or a gene encoding the NSP1 protein consisting of the nucleotide sequence of SEQ ID NO: 12.
  • the present invention can provide cells comprising the genome of the PRRSV chimeric virus of the present invention.
  • the cell refers to a cell in which the chimeric virus genome (DNA, RNA, or a vector containing the same) or the chimeric virus containing the genome is transfected in order to manufacture the chimeric virus in large quantities.
  • the type of cells is not particularly limited.
  • porcine genital respiratory syndrome virus vaccine composition comprising the PRRSV chimeric virus or a passaged cultured progeny thereof.
  • the passaged cultured progeny is a progeny virus cultured from 1 to 80 passages, 1 to 70 passages, 1 to 60 passages, 1 to 50 passages, 1 to 40 passages, 1 to 30 passages, 1 to 20 passages, or 1 to 10 passages It may be to include.
  • the vaccine may be a live vaccine or a four vaccine, but is preferably a live vaccine.
  • the attenuated PRRS chimeric virus described herein may be a modified live vaccine containing, in a surviving state, one or more virus strains described above in a pharmaceutically acceptable carrier.
  • an inactivated virus can be used to prepare a vaccine.
  • the vaccine may further include one or more selected from the group consisting of carriers, diluents, excipients, and adhuvants.
  • the pharmaceutically acceptable carrier is not particularly limited in its kind, and may include any and all solvents, dispersion media, coatings, stabilizers, preservatives, antibacterial and antifungal agents, isotonic agents, absorption delaying agents, and the like.
  • the effective amount of the attenuated chimeric virus of the present invention included in the vaccine composition may be the amount of the virus that can attract or induce an immune response in animals to which the effective dose of the virus has been administered.
  • the effective amount may depend on the vaccine components and dosing schedule.
  • the dosage of the vaccine composition is in the range of TCID 50 2 to 6, preferably 3 to 4, but may vary depending on the type of individual, but is not limited thereto.
  • the genome of the LMY-BP2017 chimeric virus of the present invention, and a vaccine composition comprising the same, can be used to prevent swine from the effects of PRRS disease.
  • subunits, including immunogenic fragments or fractions of the PRRS chimeric virus can also be used to prevent swine from the effects of PRRS disease.
  • the attenuated chimeric virus of the present invention or a vaccine composition comprising the same can be administered prophylactically before the pig is exposed to the PRRS-inducing PRRS virus strain, and can be administered to the pig at the same time the pig is exposed to the virus strain. And can be administered therapeutically after exposure of the target pig to the virus strain.
  • the vaccine composition provided by the present invention may be used for prevention of porcine genital respiratory syndrome (PRRS), for example, PRRS caused by North American PRRSV.
  • PRRS porcine genital respiratory syndrome
  • the North American PRRSV may be a type II type VR2332 virus strain.
  • the attenuated PRRSV chimeric virus of the present invention is oral, parenteral, subcutaneous, intramuscular, intradermal, sublingual, transdermal, rectal, transmucosal, surface area via inhalation, buccal administration, or its It can be administered in combination.
  • the attenuated PRRS chimeric virus can be administered in the form of an implant capable of allowing sustained release of the attenuated virus.
  • the attenuated PRRSV chimeric virus of the present invention or a vaccine composition comprising the same can be administered via injection, inhalation or transplantation, with injection being particularly preferred.
  • the attenuated PRRSV chimeric virus or vaccine composition comprising the same may be administered once or several times, and also intermittently at different dosages daily, such as for days, weeks or months.
  • the injection can be given in the desired amount or by subcutaneous or nasal spraying, or alternatively continuous injection.
  • the PRRSV chimera virus of the present invention is the TCID 50 of the virus measured by inoculating the chimeric virus and its parent strain (Accession No. GenBank accession no.DQ473474.1.) in pig lung macrophages.
  • the value of can be a virus having a TCID 50 value of 0.01 to 0.1 times compared to the TCID 50 value of the parent strain.
  • the measurement period is 2 days later, and the TCID 50 value may be 0.05 to 0.1 times.
  • the PRRSV chimeric virus of the present invention has a TCID 50 value lower than that of the parent strain, and is less attenuated and proliferative than the parent strain.
  • the PRRSV chimeric virus of the present invention and its parent strain were inoculated in pigs and the neutralizing antibody content of the mutant strain measured was 2 to 8 times, preferably Provides a virus with 2 to 4 fold. Preferably, the measurement period is 28 days later.
  • the term neutralizing antibody means an antibody having a neutralizing ability against VR2332, a representative North American PRRSV strain. Therefore, when the attenuated chimera virus of the present invention or a vaccine composition containing the same is inoculated into a pig, the titer of the neutralizing antibody of the pig increases and the immune effect on PRRS is significantly increased by increasing the expression of the pig's immune factor. I can do it.
  • the CPB value of the PRRSV chimeric virus LMY+BP2017 of the present invention described above represents a lower value than the LMY parent strain (Accession No. GenBank accession no.DQ473474.1.), preferably -0.39 To 0, more preferably -0.35 to -0.20, suitably -0.35 to -0.26, for example -0.2393184052058128.
  • the CPB level is less than -0.39, it is difficult to produce a virus, and when it exceeds 0, the operation is possible, but there is a problem in that the proliferation does not decrease and thus is not attenuated. Therefore, the attenuated LMY+BP2017 chimeric virus of the present invention preferably has the CPB level.
  • the present invention provides an LMY+BP2017 chimeric virus having a CpG, UpA value of 1.0 to 3.0 times that of a parent strain (Accession No. GenBank accession no.DQ473474.1.). Changes in the ratio of CpG and UpA inevitably occur during the deoptimization process. When the CpG and UpA levels of the eukaryotic gene are increased, cell proliferation is reduced and the virus is attenuated, thereby attenuating the virus.
  • the LMY+BP2017 chimeric virus of the present invention has higher CpG and UpA levels than the parent strain, preferably 1.0 to 3.0 times higher than the parent strain, for example, CpG of the attenuated chimeric virus of the present invention. May be 1.1753, and UpA may be 1.03.
  • the genome of the LMY ver2 mutant with accession number 13394BP is treated with restriction enzymes AscI and PacI to prepare a polynucleotide fragment, and the genome of BP2017-2 mutation having accession number KCTC 13393BP is restricted.
  • a method of producing the chimeric virus of the respiratory syndrome virus can be provided.
  • the polynucleotide fragment prepared by treating the genome of the LMY ver2 mutant with restriction enzymes AscI and PacI may include a region encoding NSP1-beta.
  • the polynucleotide fragment prepared by treating the genome of the BP2017-2 mutant with restriction enzymes AscI and PacI may include ORF2 to ORF7 sites.
  • ligase may be used, and the infectious clone prepared above may be inoculated into cells to prepare a chimeric virus.
  • the cell refers to a cell in which a chimeric virus DNA or RNA, or a vector containing it, an infectious clone, or a chimeric virus is transfected, in order to prepare a large amount of the chimeric virus, and does not specifically limit the type of cell.
  • an embodiment of the present invention may provide a composition for preventing or treating porcine genital respiratory syndrome, including the vaccine composition.
  • the composition for preventing or treating porcine reproductive and respiratory syndrome of the present invention may include additional components known to those skilled in the art, and further include suitable carriers, excipients and diluents commonly used in the manufacture of pharmaceutical compositions. Can.
  • Suitable formulations known in the art are preferred to use those disclosed in Remington's Pharmaceutical Science, recently Mack Publishing Company, Easton PA.
  • Carriers, excipients and diluents that may be included in the pharmaceutical compositions of the present invention include lactose, dextrose, sucrose, sorbitol, mannitol, xylitol, erythritol, maltitol, starch, acacia rubber, alginate, gelatin, calcium phosphate, calcium silicate, Cellulose, methyl cellulose, microcrystalline cellulose, polyvinyl pyrrolidone, water, methylhydroxy benzoate, propylhydroxy benzoate, talc, magnesium stearate and mineral oil.
  • compositions When formulating the composition, it is usually prepared using diluents or excipients such as fillers, extenders, binders, wetting agents, disintegrating agents, surfactants, and the like.
  • Solid preparations for oral administration include tablets, pills, powders, granules, capsules, etc., and these solid preparations contain at least one excipient such as starch, calcium carbonate, sucrose, lactose, gelatin, etc. in the composition. Is prepared. Also, lubricants such as magnesium stearate and talc are used in addition to simple excipients.
  • Liquid preparations for oral administration include suspensions, intravenous solutions, emulsions, syrups, etc.
  • Formulations for parenteral administration include sterile aqueous solutions, non-aqueous solvents, suspensions, emulsions, lyophilized preparations, and suppositories.
  • Non-aqueous solvents and suspensions may include propylene glycol, polyethylene glycol, vegetable oils such as olive oil, and injectable esters such as ethyl oleate.
  • Witepsol, Macrogol, Tween 61, cacao butter, laurin butter, and glycerogelatin may be used as a base for suppositories.
  • composition of the present invention depends on the condition and weight of the individual, the severity of the disease, the drug form, the route and duration of administration, but can be appropriately selected by those skilled in the art.
  • the composition of the present invention may be administered in an amount of 0.0001 to 1,000 mg/kg (body weight) per day.
  • the composition may be administered once a day or divided several times.
  • composition of the present invention can be administered to a subject by various routes. Any mode of administration can be expected.
  • Another example of the present invention can provide a method for preventing or treating porcine genital respiratory syndrome, comprising administering a vaccine composition of the present invention to a pig.
  • the vaccine composition comprising the chimeric virus genome of the present invention to pigs, it is possible to induce that the pig's immune response to the PRRSV antigen is enhanced, and to induce the pig's immune response to the PRRSV antigen to be enhanced, porcine genital respiratory syndrome It can provide a way to prevent or treat. Preferably it can be prevented.
  • the method includes subcutaneous injection, intravenous injection, intradermal injection, parenteral injection, intramuscular injection, needle free injection, electroporation, oral delivery, intranasal delivery, oronasal delivery, Or any combination thereof.
  • the present invention can provide a kit for performing any of the methods described above.
  • the kit reduces the clinical signs or effects of the container, preferably a vaccine composition containing the attenuated PRRS chimeric virus of the invention, a pharmaceutically acceptable carrier, adjuvant and PRRS infection, preferably PRRS frequency or severity Instructions for administering the immunogenic composition to an animal in need thereof may be included.
  • the kit can also include injection means and/or other forms of administration.
  • the kit may include a solvent.
  • the attenuated vaccine can be lyophilized and restored to a solvent to be a solution for injection and/or inhalation.
  • the solvent can be water, physiological saline, buffer or reinforcing solvent.
  • the kit can include a separation container containing the attenuated virus, solvent and/or pharmaceutically acceptable carrier.
  • the instructions for use may be labels and/or printed materials attached to one or more containers.
  • the PRRSV virus chimeric virus according to the present invention can be used to effectively defend PRRS by significantly increasing the secretion of neutralizing antibodies when inoculated into pigs, and can be usefully used as a vaccine for the treatment of PRRS.
  • 1 shows a general genomic arrangement of PRRS virus.
  • Figure 2 is a schematic diagram showing the genome sequence of the LMY + BP2017 chimeric virus synthesized by cutting and connecting a part of clones of the LMY ver2 virus and the BP2017-2 virus, respectively.
  • Figure 3 shows the phylogenetic tree of the PRRSV LMY ver2 virus and the LMY+BP2017 chimera virus.
  • FIG. 4 shows the proliferative difference between PRRSV LMY ver2 virus and LMY+BP2017 chimeric virus in Porcine Alveolar Macrophage cells (PAM cells).
  • Figure 5 is a PRRSV LMY, LMY+BP2017 chimera virus in pigs, comparing the secretion of neutralizing antibodies after PBS inoculation.
  • RNA Since RNA is easily destroyed, the cells were transfected by synthesizing RNA from the DNA after converting to DNA.
  • PRRS chimera virus is a non-structural protein (NON structural Protein 1, NSP1; SEQ ID NO: 11) of the variant strain of LMY strain and ORF2, ORF3, ORF4, ORF5, ORF6 of BP2017-2 isolated in 2017 from Namsan Farm, Namsan-ri, Gongju-si, Chungnam , And ORF7 sites.
  • An LMY ver2 mutant was prepared by substituting 91 bases of the nucleotide sequence of the gene at the NSP1 site using the PRRS strain, LMY strain (GenBank accession no.DQ473474.1.), isolated from the existing quarantine headquarters.
  • the NSP1 site gene was replaced with 25 bases at the NSP1-alpha site and 66 bases at the NSP1-beta site.
  • the recombinant strain LMY ver2 is a base sequence according to the Codon Pair Deoptimization Principle (Table 3) using a generally known Synthetic Attenuated Virus Engineering (SAVE) program or SAVE (Synthetic Attenuated Virus Engineering) program developed by the present inventors. A portion of the was prepared by silent mutation (silent mutation).
  • SAVE Synthetic Attenuated Virus Engineering
  • SAVE Synthetic Attenuated Virus Engineering
  • SAVE Synthetic Attenuated Virus Engineering
  • NSP1 regions (NSP1-alphe and NSP1-beta, SEQ ID NO: 11) with high genetic stability in the genome of the LNY parent strain and analyzed them with the SAVE program, and NSP1-alpha among base regions with relatively high CPB values LMY virus mutants were prepared by deoptimization by selecting 25 bases at the site, 66 bases at the NSP1-beta site, and 91 bases, replacing them with other bases.
  • the LMY virus mutant strain in which 91 base sequences of the NSP1 prepared by the above method were mutated was referred to as LMY ver2, and the base sequences are shown in Table 3 below.
  • the LMY ver2 has accession number 13394BP.
  • the bolded and underlined portion of the nucleic acid sequence of the LMY ver2 NSP1 gene is the base portion where the mutation occurred in the LMY NSP1 gene or LMY NSP1-beta gene.
  • CPB values were measured.
  • the NSP1 CPB value of the LMY parent strain was measured to be about 0.0139 and the NSP1-beta CBP value to about 0.016, but the CPB value of the LMY ver2 variant strain of the present invention was measured to be about -0.2393 to NSP1 and about -0.33 to NSP1-beta. From this, it was found that the proliferative potential of the LMY ver2 mutant strain of the present invention is reduced compared to the existing parent strain, and is an attenuated strain.
  • the entire gene sequence (GenBank accession no.DQ473474.1.) of the LMY strain was divided into 7 fragments and synthesized.
  • Fragment 1 of the 7 fragments was an NPS-1 site, and the site was synthesized as a DNA fragment (SEQ ID NO: 12) in which 91 bases among the gene base sequences of the NSP1 site of the LMY strain were substituted.
  • the synthesized fragment gene was cut with restriction enzymes in Table 5 in order, and then linked with ligase to prepare one infectious clone.
  • the PRRS virus contains a total of 8 ORFs, namely ORF1a, ORF1b, and ORF2 to 7.
  • the LMY+BP2017 chimera virus was deposited with the Korea Research Institute of Bioscience and Biotechnology Biological Resource Center on October 24, 2018, and received the accession number KCTC13675BP.
  • the LMY+BP2017 chimeric strain was identified by sequencing the LMY+BP2017 chimeric strain synthesized in Example 1 and the NSP1 region of the LMY strain (GenBank accession no.DQ473474.1.).
  • PCR was performed using the primer set of Table 8 and one step RT PCR kit (Intron) that can be detected from 1 to 1654nt, including the NSP1 region of the LMY virus, specifically, at 45°C for 30 minutes and at 95°C 5
  • the reaction was carried out for 2 minutes at 94°C for 30 seconds and 61°C for 30 seconds at 72°C, and the process was repeated 38 times.
  • sequencing of the amplification products by PCR results was completed to identify each strain.
  • phylogenetic tree was analyzed using bioedit program and Bootstrap was repeated 1000 times. Based on this, approximate LMY+BP2017 chimera virus and LMY phylogenetic tree were prepared and are shown in FIG. 3. From the phylogenetic tree of Fig. 3, the strain of the present virus was found.
  • Example 1 When the LMY+BP2017 chimera virus prepared in Example 1 was passaged, it was confirmed how long the modified site was maintained.
  • MARC-145 cells known as PRRS virus soluble cell line the LMY+BP2017 chimera virus of the present invention was stabilized after 30 passages, and the same method as in Example 3-1 was used to confirm gene mutation every 10 passages. Sequencing was performed.
  • Table 10 shows the number of nucleotide changes (nt change), mutation site (mutataion site), and amino acid mutation (a.a change) according to each passage number.
  • swine lung macrophages (PAM, Porcine Alveolar Macrophage) inoculated with the LMY+BP2017 chimera virus and its parent strain, LMY, and then the virus produced It was confirmed by measuring the amount of TCID 50 .
  • PAM cells were dispensed at a rate of 2 X 10 6 cells/well per 6 well plates containing 2 ml of RPMI medium (including 10% FBS, 1% penicillin, and streptomycin).
  • RPMI medium including 10% FBS, 1% penicillin, and streptomycin.
  • LMY and LMY+BP2017 chimera viruses were inoculated into different wells at a rate of 0.01 of MOI, and after 1 hour of inoculation, all the supernatant was removed, and maintenance fluid RPMI medium (including 10% FBS, 1% penicillin, streptomycin) 2 ml was dispensed. Two days after dispensing, the supernatant of each well was collected to measure TCID 50 (Tissue culture infective dose 50 ).
  • the cells used in the subsequent experiments were prepared by adding 2X10 5 cell/well of MARC-145 cells to 96 wells on the day before the measurement of TCID 50 in DMEM medium (10% (v/v) FBS, 1% (w/v) penicillin, streptomycin) 100ul. It was used by dispensing with.
  • Viruses to be inoculated were prepared as follows. The supernatant collected above was dispensed in a row in 200uL to the leftmost well of a 96-well plate, and DMEM medium (FBS, no antibiotic added) was dispensed in 180 ⁇ l to the remaining wells. Next, 20 ⁇ l was collected using a multi-pipet one after the other from the left and diluted 10-fold while dispensing into the right well. The tips were diluted one after the other and the last 12th well was maintained as a negative control. The prepared virus dilution was inoculated on a plate to which MARC-145 cells were attached.
  • DMEM medium FBS, no antibiotic added
  • CPE cytopathogenic effect
  • the LMY+BP2017 chimeric strain and the parent strain LMY strain were inoculated into porcine lung macrophages (PAM cells) and the TCID 50 values measured after 1 to 2 days are shown in Tables 11 and 4 below.
  • the value of TCID 50 measured on the 2nd day when the strain was inoculated and the virus began to be harvested was LMY+BP2017 chimera, showing a TCID 50 value 100 times lower than LMY. From this, it was found that the LMY+BP2017 chimera virus of the present invention in PAM (Porcine Alveolar Macrophage) cell, which is the main infecting cell of PRRS, has at least 10-fold reduction in proliferative properties compared to LMY, and the LMY+BP2017 chimera virus of the present invention. It was confirmed that the proliferation was reduced and attenuated more than the parent strain LMY.
  • PAM Porcine Alveolar Macrophage
  • the inspection method was conducted in accordance with a known method. All serum samples were heat inactivated at 56°C for 45 minutes before starting the test. Inactivated serum was placed in RPMI 1640 medium (10% FCS, 20mM L-glutamine, antibiotic-antimycotic mixture-100IU/ml penicillin, 100 ⁇ g/ml streptomycin, 50 ⁇ g/ml gentamycin, 0.25 mg/ml amphotericin B) and doubled in sequence. Diluted. Subsequently, 100 ⁇ l of each diluted serum was collected, mixed with 100 ⁇ l of the previously prepared VR2332 strain 200 TCID 50 /ml and incubated at 37° C.

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Abstract

The present invention relates to a chimeric virus of porcine reproductive and respiratory syndrome (PRRS) virus, the chimeric virus being usable as a vaccine. A PRRSV chimeric virus of the present invention is more attenuated than the parent strain thereof, and thus promotes the secretion of neutralizing antibodies while having low pathogenicity and high stability, thereby being usable as a vaccine in the effective prevention and treatment of PRRS diseases.

Description

돼지 생식기 및 호흡기 증후군 바이러스의 키메라 바이러스 및 이를 이용한 백신Chimeric virus of swine genital and respiratory syndrome virus and vaccine using same
본 발명은 백신으로 사용할 수 있는 돼지 생식기 및 호흡기 증후군 바이러스(PRRSV)의 키메라 바이러스에 관한 것으로, 본 발명의 키메라 바이러스는 모균주에 비해 병원성이 낮고 안전성이 높다. 본 발명의 PRRSV 키메라 바이러스는 교차면역과 관련된 중화항체의 분비를 향상시키며, 돼지 생식기 및 호흡기 증후군을 효과적으로 방어할 수 있는 백신을 제공할 수 있다.The present invention relates to a chimeric virus of porcine genital and respiratory syndrome virus (PRRSV) that can be used as a vaccine, and the chimeric virus of the present invention has lower pathogenicity and higher safety than the parent strain. The PRRSV chimeric virus of the present invention improves the secretion of neutralizing antibodies related to cross-immunity, and can provide a vaccine that can effectively protect porcine genital and respiratory syndrome.
돼지 생식기 및 호흡기 증후군(Porcine Reproductive and Respiratory Syndrome, 이하 PRRS)은 돼지 써코바이러스 감염증 및 구제역과 함께 국내 양돈산업에 가장 큰 피해를 주는 전염병에 해당한다. PRRS는 임신한 암퇘지의 생식 불능, 유산이나 조산, 사산의 번식장애를 유발하며, 젖먹이 돼지와 비육돈에게 재채기, 발열 등의 호흡기 증상을 유발한다. 일반적으로 바이러스에 이환된 이후 세균 등의 2차 감염에 의해 심한 호흡기 증상을 야기하지만, 만성적으로 감염된 경우에는 특징적인 임상 증상 없이 증체량 감소 및 폐사율의 증가를 나타나게 된다.Porcine Reproductive and Respiratory Syndrome (PRRS) is one of the most damaging infectious diseases in the domestic pig industry along with swine circovirus infection and foot and mouth disease. PRRS causes reproductive inability of pregnant sows, miscarriage or premature birth, reproductive disorders in stillbirths, and respiratory symptoms such as sneezing and fever in suckling pigs and piglets. In general, after infection with the virus, severe respiratory symptoms are caused by secondary infection such as bacteria, but in case of chronic infection, a decrease in body weight and an increase in mortality are observed without characteristic clinical symptoms.
이 바이러스 질환은 미국에서 1987년에 최초로 발견되었고, 이어서 유럽에서 발견되었으며, 1990년대 초에 아시아에서 동정되었다. 지금까지, PRRS는 양돈국가에서 풍토병의 특징을 가지며 세계적으로 확산되어, 매년 막대한 경제적 손실을 일으켰다.The viral disease was first discovered in the United States in 1987, then in Europe, and was identified in Asia in the early 1990s. So far, PRRS has been characterized by endemic disease in swine countries and has spread worldwide, causing huge economic losses every year.
PRRS의 원인이 되는 병원체는 Arterivirus 속, Arteriviridae 과, Nidovirales 목에 속하는 PRRS 바이러스이다. PRRS 바이러스는 positive-sense single stranded RNA genome을 갖고 있으며, 크기는 약 15.4 kilobase이다. PRRS 바이러스의 genome은 9개의 ORF를 갖고 있다(Conzelmann et al., 1993; Meulenberg et al., 1993). 그 중 비구조단백질(Non Structural Protein, NSP)을 코딩하는 ORF1a 및 ORF1b가 바이러스 지놈의 약 80%를 차지하고 있다(Bautista et al., 2002; Meulenberg et al., 1993; Snijder and Meulenberg, 1998, 2001). 상기 비구조단백질 중 NSP1-alpha, NSP-1 beta, NSP2 내지 NSP8은 ORF1a에, NSP9 내지 NSP12는 ORF1b에 위치하는 것으로 알려져 있다. 글리코실화된 구조 단백질인 GP2, GP3, GP4, GP5와, 비글리코실화된 막(Membrane, M) 단백질, 뉴클레오캡시드 (N) 단백질은 나머지 20%를 차지하는 ORF2-7에 의하여 코딩된다. minor 구조단백질인 GP2, GP3, GP4가 heterotrimer를 형성하여 바이러스가 숙주 세포 내로 침입할 때 작용하며, major 구조단백질인 GP5, M은 heterodimer를 형성하여 바이러스의 감염력을 높여주는 작용을 한다.The pathogens responsible for PRRS are the PRRS virus belonging to the genus Arterivirus, Arteriviridae, and Nidovirales. The PRRS virus has a positive-sense single stranded RNA genome and is about 15.4 kilobase in size. The genome of the PRRS virus has 9 ORFs (Conzelmann et al., 1993; Meulenberg et al., 1993). Among them, ORF1a and ORF1b encoding non-structural proteins (NSPs) account for about 80% of viral genomes (Bautista et al., 2002; Meulenberg et al., 1993; Snijder and Meulenberg, 1998, 2001) . It is known that NSP1-alpha, NSP-1 beta, NSP2 to NSP8 are located in ORF1a, and NSP9 to NSP12 are located in ORF1b among the non-structural proteins. The glycosylated structural proteins GP2, GP3, GP4, GP5, non-glycosylated membrane (Membrane, M) protein, and nucleocapsid (N) protein are encoded by ORF2-7, which accounts for the remaining 20%. The minor structural proteins GP2, GP3, and GP4 form heterotrimers, which act when viruses enter the host cell. The major structural proteins, GP5, M, form heterodimers to increase the infectivity of the virus.
PRRS 바이러스는 RNA 바이러스의 특성상 변이가 심하여 바이러스 간에 차이가 많이 난다. PRRS 바이러스는 크게 북미형과 유럽형으로 나뉜다. 유럽형을 대표하는 타입 I형(Lelystad virus, LV) 및 북미형 바이러스주(Northern American strain) ATCC VR2332를 대표하는 타입 II형(VR2332의 게놈 서열은 GenBank 등록번호 AY150564 참조)(Murtaugh et al., Arch Virol. 1995; 140:1451-1460) 이 있다.The PRRS virus is highly mutated due to the nature of the RNA virus, so there are many differences between the viruses. PRRS virus is largely divided into North American and European. Type I representing the European type (Lelystad virus, LV) and Type II representing the North American strain ATCC VR2332 (for genome sequence of VR2332, refer to GenBank accession number AY150564) (Murtaugh et al., Arch Virol. 1995; 140:1451-1460).
북미형과 유럽형 간에는 최대 40%까지 유전자 차이가 존재하여 서로 교차 방어가 되지 않는 것으로 알려져 있다. 또한 같은 타입에 속하는 변이주 간에도 교차 방어가 되지 않는 경우가 많다(Meng, X. J. et al., 2000). 이로 인해, 각각에 대해 표준 변이주 기반의 백신은 제작되어 있지만 교차 방어능이 좋지 못하기 때문에 PRRS를 효과적으로 예방하지 못하고 있는 실정이다. 이를 극복하기 위하여 안전성, 면역원성, 및 방어능을 효과적으로 갖춘 백신을 제작하기 위한 다양한 시도가 이루어지고 있다.It is known that there is a genetic difference of up to 40% between the North American type and the European type, so that they do not cross-protect each other. Also, cross-defense is often not achieved even among mutants belonging to the same type (Meng, X. J. et al., 2000). For this reason, a standard mutant-based vaccine is produced for each, but it is not effectively preventing PRRS due to poor cross-defense. In order to overcome this, various attempts have been made to produce a vaccine effectively equipped with safety, immunogenicity, and defense ability.
이 같은 질병의 심각성 때문에 돼지 생식기 호흡기 증후군(PRRS)의 원인체인 돼지생식기호흡기증후군 바이러스(PRRSV)를 발견한 이후, 약 20년 동안 이 바이러스에 대한 예방법을 개발하기 위하여 많은 노력이 투자되었음에도 아직까지 효과적인 예방법 및 관리법이 개발되지 않은 실정이다. 돼지생식기호흡기증후군 바이러스(PRRSV) 제어를 위해 불활화 백신과 약독화 생백신 등 다양한 백신이 개발되었으나, 오직 감염성이 확보된 약독화 백신만이 만족스러운 수준의 방어 효과를 유도하는 것으로 밝혀졌다. 하지만, 돼지생식기호흡기증후군 바이러스(PRRSV)가 유전적으로 매우 다양하게 존재하기 때문에 다양한 바이러스 종류간의 교차면역이 부재하여 하나의 백신으로 다양한 돼지생식기호흡기증후군 바이러스(PRRSV)를 방어하기는 어렵다. 또한 현재 약독화 백신은 다른 동물 종의 세포 주에서 100~200 계대 이상의 연속 계대를 통해서만 생산이 가능하므로 개발 기간이 길고 효능과 안전성의 보장이 어려운 문제가 있다. 이로 인해 각각에 대해 표준 변이주 기반의 백신은 제작되어 있지만 교차 방어능이 좋지 못하기 때문에 PRRS를 효과적으로 예방하지 못하고 있는 실정이다.Because of the severity of this disease, after discovering the porcine reproductive and respiratory syndrome virus (PRRSV), the cause of porcine reproductive and respiratory syndrome (PRRS), it has still been effective even though much effort has been invested to develop preventive measures against the virus for about 20 years. Prevention and management methods have not been developed. Various vaccines such as inactivated vaccines and live attenuated vaccines have been developed to control porcine reproductive and respiratory syndrome virus (PRRSV), but only attenuated vaccines with infectious properties have been found to induce satisfactory protective effects. However, because the swine respiratory syndrome virus (PRRSV) is genetically diverse, there is no cross-immunity between various virus types, so it is difficult to protect various swine respiratory syndrome virus (PRRSV) with one vaccine. In addition, the current attenuated vaccine can be produced only through successive passages of 100 to 200 or more passages in cell lines of other animal species, so there is a problem that the development period is long and the efficacy and safety are difficult to be guaranteed. Because of this, a standard mutant-based vaccine is produced for each, but it is not effectively preventing PRRS because of its poor cross-defense ability.
이를 극복하기 위하여 안전성, 면역원성, 및 방어능을 효과적으로 갖춘 백신을 제작하기 위한 다양한 시도가 이루어지고 있다(출원번호 제10-2011-7004020호, 발명의 명칭: 고병원성 돼지 생식기 및 호흡기 증후군(HP PRRS)에 대한 백신).In order to overcome this, various attempts have been made to produce a vaccine effectively equipped with safety, immunogenicity, and defense ability (Application No. 10-2011-7004020, title of the invention: highly pathogenic porcine genital and respiratory syndrome (HP PRRS Vaccine against )).
본 발명은 병원성이 낮고 안정성이 높으며, 중화항체의 분비를 향상시킨 돼지 생식기 및 호흡기 증후군 바이러스(PRRSV)의 키메라 바이러스, 이를 포함하는 백신, 및 이의 제조방법에 관한 것이다.The present invention relates to a chimeric virus of porcine genital and respiratory syndrome virus (PRRSV) that has low pathogenicity, high stability, and improved secretion of neutralizing antibodies, a vaccine comprising the same, and a method for manufacturing the same.
일 예에서, 상기 키메라 바이러스는In one example, the chimeric virus is
(1) 수탁번호 KCTC 13394BP의 LMY ver2 변이주에서 유래한 ORF1a 및 ORF1b의 핵산 서열 또는 이와 기능적 동등성을 유지하면서 상기 핵산 서열과 70% 이상 서열 상동성을 갖는 핵산 서열, 및(1) The nucleic acid sequence of ORF1a and ORF1b derived from the LMY ver2 mutant strain of accession number KCTC 13394BP or a nucleic acid sequence having 70% or more sequence homology with the nucleic acid sequence while maintaining functional equivalence thereto, and
(2) 수탁번호 KCTC 13393BP를 갖는 BP2017-2 분리주의 ORF2 내지 ORF7 부위의 핵산 서열 또는 이와 기능적 동등성을 유지하면서 상기 핵산 서열과 70% 이상 서열 상동성을 갖는 핵산 서열(2) The nucleic acid sequence of the ORF2 to ORF7 region of the BP2017-2 isolate with accession number KCTC 13393BP or a nucleic acid sequence having 70% or more sequence homology with the nucleic acid sequence while maintaining functional equivalence thereto
을 포함하는 것일 수 있다.It may be to include.
본 발명은 백신으로 사용할 수 있는 돼지생식기 및 호흡기 증후군(PRRS) 바이러스의 키메라 바이러스에 관한 것이다. 본 발명의 PRRSV 키메라 바이러스는 모균주보다 약독화되어 있어 병원성이 낮고 안정성이 높으며, 교차면역이 가능한 중화항체의 분비를 향상시킴으로써 돼지의 면역력을 현저히 증진시킨다. 이에, PRRS 질환의 효과적인 예방 및 치료용 백신으로 사용할 수 있다.The present invention relates to a chimera virus of porcine reproductive and respiratory syndrome (PRRS) virus that can be used as a vaccine. The PRRSV chimeric virus of the present invention is attenuated more than the parent strain, and thus has low pathogenicity and high stability, and significantly improves the immunity of pigs by improving the secretion of neutralizing antibodies capable of cross-immunization. Therefore, it can be used as a vaccine for effective prevention and treatment of PRRS disease.
이하, 본 발명을 더욱 자세히 설명한다.Hereinafter, the present invention will be described in more detail.
본 명세서에 사용된 "약독화된 바이러스"는 PRRS 질환의 임상 징후를 유발하지 않고 표적 포유동물에서 면역반응을 유발할 수 있는 무독성 바이러스를 의미하기도 하고, 또한 약독화된 바이러스로 감염되고 약독화된 바이러스를 투여받지 못한 동물에서 임상 징후의 발생빈도를 낮추거나, 징후의 중증도가 비-약독화된 PRRS 바이러스로 감염된 "대조군" 동물에 비해 감소된 것을 의미하기도 한다. 이러한 상황에서, "감소/감소된"이란 용어는 앞에서 정의한 대조군에 비해 적어도 10%, 바람직하게는 25%, 더욱 바람직하게는 50%, 가장 바람직하게는 100% 이상의 감소를 의미한다.As used herein, “attenuated virus” refers to a non-toxic virus that is capable of eliciting an immune response in a target mammal without causing clinical signs of PRRS disease, and is also an attenuated virus infected and attenuated virus It may also mean that the incidence of clinical signs is lowered in animals that have not been dosed with, or that the severity of the signs is reduced compared to "control" animals infected with the non-attenuated PRRS virus. In this situation, the term “reduced/reduced” refers to a reduction of at least 10%, preferably 25%, more preferably 50%, most preferably 100% or more compared to the control group defined above.
본 명세서에 사용된 "백신 조성물"은 PRRS 키메라 바이러스 또는 이의 임의의 면역원성 단편 또는 분획, 바람직하게는 약독화된 PRRS 키메라 바이러스, 예컨대 상기 본 발명의 PRRS 키메라 바이러스일 수 있다. 이는 숙주의 "면역학적 반응"을 PRRSV에 대한 세포 및/또는 항체 매개의 면역 반응으로 유발한다. 백신 조성물은 PRRSV 감염 및 이와 관련된 임상 징후들에 대해 예방 면역을 부여할 수 있는 것이 바람직하다.“Vaccine composition” as used herein may be a PRRS chimeric virus or any immunogenic fragment or fraction thereof, preferably an attenuated PRRS chimeric virus, such as the PRRS chimeric virus of the present invention. This causes the host's “immunological response” to be a cellular and/or antibody-mediated immune response to PRRSV. It is preferred that the vaccine composition is capable of conferring preventive immunity against PRRSV infection and clinical signs associated therewith.
본 명세서에 사용된 "면역 반응"은 상기 본 발명의 PRRSV 키메라 바이러스, 또는 이를 포함하는 백신 조성물을 투여받은 동물에게 투여된 키메라 바이러스 또는 백신에 대한 임의의 세포- 및/또는 항체-매개의 면역 반응을 의미한다. 보통, "면역 반응"은 다음과 같은 효과 중 하나 이상을 포함하지만, 이에 국한되는 것은 아니다: 당해 조성물 또는 백신에 포함된 항원 또는 항원들에 대해 특이적으로 유도된 항체, B 세포, 헬퍼 T 세포, 억제인자 T 세포 및/또는 세포독성 T 세포 및/또는 γδ T 세포의 생산 또는 활성화. 숙주는 면역원성 조성물이나 백신을 투여받지 않은 대조군에 비해 새로운 감염에 대한 내성이 향상되고/되거나 질환의 임상 중증도가 감소되도록 치료적 또는 예방적 면역학적 반응을 나타내는 것이 바람직하다. 이러한 예방은 최대 전술한 숙주 감염과 관련된 증상들의 결여 및 이를 비롯하여 빈도 또는 중증도의 감소에 의해 증명될 것이다.As used herein, "immune response" refers to any cell- and/or antibody-mediated immune response to a chimeric virus or vaccine administered to an animal receiving the PRRSV chimeric virus of the present invention, or a vaccine composition comprising the same. Means Usually, an “immune response” includes, but is not limited to, one or more of the following effects: antibodies, B cells, helper T cells specifically directed against antigens or antigens included in the composition or vaccine. , Production or activation of inhibitor T cells and/or cytotoxic T cells and/or γδ T cells. It is preferred that the host exhibit a therapeutic or prophylactic immunological response such that the resistance to new infection is improved and/or the clinical severity of the disease is reduced compared to a control group that has not been administered an immunogenic composition or vaccine. This prevention will be evidenced by the lack of symptoms associated with the host infections described above, as well as a decrease in frequency or severity, as well.
본 명세서에 사용된 "돼지들", "돼지" 및 "새끼돼지"는 호환 사용될 수 있다.As used herein, "pigs", "pigs" and "pigs" may be used interchangeably.
"백신을 접종하다"는 PRRS 질환에 노출되기 전에 본 명세서에 기술된 PRRSV 키메라 바이러스 또는 이를 포함하는 백신을 투여하는 것을 의미한다.“Vaccinating” means administering the PRRSV chimeric virus described herein or a vaccine comprising it before exposure to PRRS disease.
"예방하다" 또는 "예방"은 본 발명의 PRRSV 바이러스 또는 이를 포함하는 백신조성물을 투여받은 결과로서, PRRS의 임상의 발생 빈도, 징후의 중증도 또는 빈도가 감소하는 것을 의미한다. 중증도 또는 빈도의 감소는 본 발명의 PRRSV 키메라 바이러스 또는 이를 포함하는 백신조성물을 투여받지 않은 동물 또는 동물 그룹과 비교한 결과이다. 상기 동물은 바람직하게는 돼지일 수 있다.“Prevent” or “prophylaxis” means that as a result of receiving the PRRSV virus of the present invention or a vaccine composition comprising the same, the clinical incidence of PRRS, the severity or frequency of symptoms decreases. The decrease in severity or frequency is a result of comparing the PRRSV chimeric virus of the present invention or a vaccine composition comprising the same with an animal or group of animals that has not been administered. The animal is preferably a pig.
본 명세서의 염기 서열은 편의를 위해 DNA 뉴클레오타이드를 기준으로 기재되었으며, 폴리뉴클레오타이드의 종류가 RNA인 경우에는 염기서열 내 모든 또는 일부 티민(Thymine, T)이 우라실(Uracil, U)로 치환된 서열을 의미한다.For convenience, the nucleotide sequence of the present specification has been described based on DNA nucleotides, and when the type of polynucleotide is RNA, a sequence in which all or some thymine (T) in the nucleotide sequence is substituted with uracil (U) it means.
본 명세서에서 특정 염기서열 및/또는 아미노산 "서열로 구성되는"은 상기 서열을 포함하는, 상기 서열을 필수적으로 포함하는, 및/또는 상기 서열로 이루어지는을 모두 포함하며, 필요에 따라 적절히 치환하여 사용될 수 있다.In the present specification, a specific nucleotide sequence and/or amino acid "consisting of a sequence" includes the sequence, essentially comprising the sequence, and/or comprising all of the sequence, and may be used by appropriate substitution as necessary. Can.
본 발명은 돼지에 영향을 미치는 바이러스 질환인 돼지 생식기 및 호흡기 증후군(PRRSV)에 대해 약독화된 키메라 바이러스를 제공한다.The present invention provides a chimeric virus attenuated against swine genital and respiratory syndrome (PRRSV), a viral disease affecting pigs.
상기 목적을 달성하기 위해, 본 발명은 구조식 1의 구조를 포함하는 폴리뉴클레오타이드를 제공한다:In order to achieve the above object, the present invention provides a polynucleotide comprising the structure of structural formula 1:
[구조식 1][Structural Formula 1]
Figure PCTKR2019017319-appb-I000001
Figure PCTKR2019017319-appb-I000001
상기 식에서, [X]는 수탁번호 KCTC 13394BP를 갖는 LMY ver2 변이주의 NSP1 유전자 (NSP1-alpha 유전자 및 NSP1-beta 유전자)의 핵산 서열 또는 상기 핵산 서열과 동등한 기능이 유지되는 범위 내에서 70% 이상의 서열 상동성을 갖는 핵산 서열을 포함하며, 예를 들어 LMY ver2 변이주의 NSP1 유전자의 핵산 서열 또는 상기 핵산 서열과 동등한 기능이 유지되는 범위 내에서 70% 이상의 서열 상동성을 갖는 핵산 서열을 포함하는, 수탁번호 13394BP를 갖는 LMY ver2 변이주의 ORF1a 및 ORF1b 부위의 유전자의 핵산 서열 또는 상기 ORF1a 및 ORF1b 부위의 유전자의 핵산 서열과 70% 이상의 서열 상동성을 갖는 핵산 서열이며, 상기 [Y]는 수탁번호 KCTC 13393BP를 갖는 BP2017-2 변이주의 ORF2 내지 ORF7 부위의 유전자 핵산 서열 또는 상기 핵산 서열과 동등한 기능이 유지되는 범위 내에서 70% 이상의 서열 상동성을 갖는 핵산 서열이다. 본 명세서에 사용된 바로서, 상기 "동등한 기능"은 목적하는 기능과 질적(활성) 및/또는 양적(수준)으로 동일 또는 유사한 기능을 의미할 수 있다. 예를 들어, 상기 유전자가 암호화하는 단백질의 아미노산 서열이 야생형 유전자가 암호화하는 단백질의 아미노산 서열과 동일한 것일 수 있다.In the above formula, [X] is a nucleic acid sequence of the NSP1 gene (NSP1-alpha gene and NSP1-beta gene) of the LMY ver2 mutant strain having accession number KCTC 13394BP, or a sequence of 70% or more within a range in which functions equivalent to the nucleic acid sequence are maintained. Containing a nucleic acid sequence having homology, including, for example, a nucleic acid sequence of the NSP1 gene of the LMY ver2 variant strain or a nucleic acid sequence having 70% or more sequence homology within a range in which functions equivalent to the nucleic acid sequence are maintained The nucleic acid sequence of the gene of the ORF1a and ORF1b regions of the LMY ver2 variant strain having the number 13394BP or the nucleic acid sequence of the gene of the genes of the ORF1a and ORF1b regions is 70% or more sequence homology, and [Y] is accession number KCTC 13393BP It is a nucleic acid sequence having a sequence homology of 70% or more within a range in which the gene nucleic acid sequence of the ORF2 to ORF7 region of the BP2017-2 mutant strain having or a function equivalent to the nucleic acid sequence is maintained. As used herein, the "equivalent function" may mean the same or similar function in qualitative (active) and/or quantitative (level) with the desired function. For example, the amino acid sequence of the protein encoded by the gene may be the same as the amino acid sequence of the protein encoded by the wild type gene.
일 예에서, 상기 [X]는 서열번호 11의 염기서열로 이루어지는 NSP1 유전자의 핵산 서열에서, 상기 NSP1 유전자에 의해 암호화되는 NSP1 단백질의 아미노산 서열이 동일하게 유지되는 범위 내에서 발생하는 모든 종류의 점 돌연변이 (침묵 돌연변이)를 포함할 수 있으며, 예를 들어 NSP1 유전자의 CBP 수치를 낮추기 위한 목적 범위에서 자유롭게 선택되어 사용될 수 있다.In one example, the [X] in the nucleic acid sequence of the NSP1 gene consisting of the nucleotide sequence of SEQ ID NO: 11, all kinds of points that occur within the range in which the amino acid sequence of the NSP1 protein encoded by the NSP1 gene remains the same It may include a mutation (silent mutation), for example, can be freely selected and used within a target range for lowering the CBP level of the NSP1 gene.
예를 들어, 상기 [X]는 서열번호 11의 염기서열로 이루어지는 NSP1 유전자의 핵산 서열에서, 222번 위치, 225번 위치, 237번 위치, 240번 위치, 252번 위치, 306번 위치, 309번 위치, 312번 위치, 315번 위치, 324번 위치, 327번 위치, 330번 위치, 333번 위치, 336번 위치, 339번 위치, 342번 위치, 345번 위치, 357번 위치, 363번 위치, 366번 위치, 378번 위치, 379번 위치, 381번 위치, 393번 위치, 396번 위치, 543번 위치, 546번 위치, 549번 위치, 555번 위치, 558번 위치, 561번 위치, 573번 위치, 579번 위치, 582번 위치, 588번 위치, 612번 위치, 618번 위치, 621번 위치, 627번 위치, 633번 위치, 639번 위치, 654번 위치, 673번 위치, 675번 위치, 678번 위치, 681번 위치, 684번 위치, 705번 위치, 708번 위치, 729번 위치, 735번 위치, 738번 위치, 741번 위치, 744번 위치, 747번 위치, 771번 위치, 786번 위치, 789번 위치, 792번 위치, 810번 위치, 825번 위치, 828번 위치, 838번 위치, 840번 위치, 846번 위치, 849번 위치, 858번 위치, 867번 위치, 879번 위치, 882번 위치, 885번 위치, 891번 위치, 900번 위치, 903번 위치, 906번 위치, 924번 위치, 936번 위치, 939번 위치, 948번 위치, 954번 위치, 963번 위치, 966번 위치, 1026번 위치, 1029번 위치, 1038번 위치, 1047번 위치, 1053번 위치, 1066번 위치, 1068번 위치, 1086번 위치, 및 1110번 위치로 이루어지는 군에서 선택되는 하나 이상, 25 이상, 66 이상, 80 이상 또는 91개 전체 위치의 염기가 치환된 변이일 수 있다.For example, [X] in the nucleic acid sequence of the NSP1 gene consisting of the nucleotide sequence of SEQ ID NO: 11, position 222, position 225, position 237, position 240, position 252, position 306, position 309 Position, Position 312, Position 315, Position 324, Position 327, Position 330, Position 333, Position 336, Position 339, Position 342, Position 345, Position 357, Position 363, Position 366, Position 378, Position 379, Position 381, Position 393, Position 396, Position 543, Position 546, Position 549, Position 555, Position 558, Position 561, 573 Position, Position 579, Position 582, Position 588, Position 612, Position 618, Position 621, Position 627, Position 633, Position 639, Position 654, Position 673, Position 675, Position 678, Position 681, Position 684, Position 705, Position 708, Position 729, Position 735, Position 738, Position 741, Position 744, Position 747, Position 771, Position 786 Position, Position 789, Position 792, Position 810, Position 825, Position 828, Position 838, Position 840, Position 846, Position 849, Position 858, Position 867, Position 879, Position 882, Position 885, Position 891, Position 900, Position 903, Position 906, Position 924, Position 936, Position 939, Position 948, Position 954, Position 963, Position 966 One or more selected from the group consisting of position, 1026 position, 1029 position, 1038 position, 1047 position, 1053 position, 1066 position, 1068 position, 1086 position, and 1110 position, 25 or more, It may be a variation in which bases of 66 or more, 80 or more, or 91 whole positions are substituted.
일 예에서, 상기 [X]는 서열번호 11의 염기서열로 이루어지는 NSP1 유전자의 핵산 서열에서, 222번 위치의 G가 C로 치환된 변이, 225번 위치의 C가 A로 치환된 변이, 237번 위치의 T가 C로 치환된 변이, 240번 위치의 A가 T로 치환된 변이, 252번 위치의 T가 C로 치환된 변이, 306번 위치의 A가 C로 치환된 변이, 309번 위치의 T가 C로 치환된 변이, 312번 위치의 G가 A로 치환된 변이, 315번 위치의 C가 A로 치환된 변이, 324번 위치의 T가 C로 치환된 변이, 327번 위치의 C가 G로 치환된 변이, 330번 위치의 G가 A로 치환된 변이, 333번 위치의 C가 T로 치환된 변이, 336번 위치의 C가 G로 치환된 변이, 339번 위치의 T가 C로 치환된 변이, 342번 위치의 A가 T로 치환된 변이, 345번 위치의 T가 A로 치환된 변이, 357번 위치의 A가 G로 치환된 변이, 363번 위치의 T가 A로 치환된 변이, 366번 위치의 T가 C로 치환된 변이, 378번 위치의 C가 T로 치환된 변이, 379번 위치의 C가 A로 치환된 변이, 381번 위치의 C가 G로 치환된 변이, 393번 위치의 T가 C로 치환된 변이, 396번 위치의 T가 A로 치환된 변이, 543번 위치의 T가 C로 치환된 변이, 546번 위치의 T가 C로 치환된 변이, 549번 위치의 C가 A로 치환된 변이, 555번 위치의 T가 C로 치환된 변이, 558번 위치의 T가 C로 치환된 변이, 561번 위치의 T가 A로 치환된 변이, 573번 위치의 C가 T로 치환된 변이, 579번 위치의 T가 C로 치환된 변이, 582번 위치의 G가 T로 치환된 변이, 588번 위치의 T가 C로 치환된 변이, 612번 위치의 T가 C로 치환된 변이, 618번 위치의 G가 C로 치환된 변이, 621번 위치의 T가 C로 치환된 변이, 627번 위치의 A가 T로 치환된 변이, 633번 위치의 T가 C로 치환된 변이, 639번 위치의 T가 G로 치환된 변이, 654번 위치의 C가 T로 치환된 변이, 673번 위치의 C가 T로 치환된 변이, 675번 위치의 C가 A로 치환된 변이, 678번 위치의 C가 T로 치환된 변이, 681번 위치의 C가 G로 치환된 변이, 684번 위치의 C가 G로 치환된 변이, 705번 위치의 G가 C로 치환된 변이, 708번 위치의 C가 T로 치환된 변이, 729번 위치의 A가 C로 치환된 변이, 735번 위치의 T가 C로 치환된 변이, 738번 위치의 G가 T로 치환된 변이, 741번 위치의 T가 C로 치환된 변이, 744번 위치의 T가 C로 치환된 변이, 747번 위치의 T가 A로 치환된 변이, 771번 위치의 T가 C로 치환된 변이, 786번 위치의 T가 C로 치환된 변이, 789번 위치의 C가 T로 치환된 변이, 792번 위치의 T가 G로 치환된 변이, 810번 위치의 C가 T로 치환된 변이, 825번 위치의 T가 C로 치환된 변이, 828번 위치의 C가 T로 치환된 변이, 838번 위치의 T가 C로 치환된 변이, 840번 위치의 G가 C로 치환된 변이, 846번 위치의 C가 G로 치환된 변이, 849번 위치의 G가 A로 치환된 변이, 858번 위치의 A가 G로 치환된 변이, 867번 위치의 T가 C로 치환된 변이, 879번 위치의 T가 C로 치환된 변이, 882번 위치의 C가 G로 치환된 변이, 885번 위치의 C가 T로 치환된 변이, 891번 위치의 C가 T로 치환된 변이, 900번 위치의 T가 C로 치환된 변이, 903번 위치의 C가 A로 치환된 변이, 906번 위치의 T가 C로 치환된 변이, 924번 위치의 G가 T로 치환된 변이, 936번 위치의 T가 C로 치환된 변이, 939번 위치의 T가 C로 치환된 변이, 948번 위치의 A가 C로 치환된 변이, 954번 위치의 A가 C로 치환된 변이, 963번 위치의 A가 T로 치환된 변이, 966번 위치의 T가 C로 치환된 변이, 1026번 위치의 A가 G로 치환된 변이, 1029번 위치의 G가 C로 치환된 변이, 1038번 위치의 C가 T로 치환된 변이, 1047번 위치의 T가 C로 치환된 변이, 1053번 위치의 T가 C로 치환된 변이, 1066번 위치의 A가 C로 치환된 변이, 1068번 위치의 A가 C로 치환된 변이, 1086번 위치의 C가 T로 치환된 변이, 및 1110번 위치의 T가 C로 치환된 변이로 이루어진 군에서 선택된 1 이상, 25 이상, 66 이상, 80 이상, 또는 상기 91개 변이 모두를 포함할 수 있다.In one example, in the nucleic acid sequence of the NSP1 gene consisting of the nucleotide sequence of SEQ ID NO: 11, G is substituted at position 222 by C, and C is substituted at position 225 by A, 237 Variation in which position T is substituted by C, mutation in position 240 is replaced by T, mutation in position 252 is substituted by C, mutation in position 306 is substituted by C, and mutation in position 309 T is substituted with C, G at position 312 is substituted with A, C at position 315 is substituted with A, T at position 324 is substituted with C, C at position 327 is G substitution at position 330, G at position 330, A substitution, C at position 333, T substitution, C at position 336 at G, G substitution, T at position 339 as C Substituted mutation, mutation in which A at position 342 is substituted by T, mutation in which T at position 345 is substituted by A, mutation in which A at position 357 is substituted by G, substitution at T at position 363 is replaced by A Variation in which T at position 366 is substituted for C, V for C at position 378, T for substitution at C at position 379, V at C at position 381 is substituted by G, Variation in which T at position 393 is substituted by C, mutation in which T at position 396 is substituted by A, mutation at which T at position 543 is substituted by C, mutation at which T at position 546 is substituted by C, 549 Variation in which position C is substituted by A, mutation in position 555 is substituted by C, mutation in position 558 is substituted by C, mutation in position 561 is substituted by A, position 573 C is substituted with T, 579 is replaced by T, C is 582, G is substituted by T, 588 is replaced by C, C is substituted, T is 612 C substitution, G at position 618, C substitution, T at position 621, C substitution, A at position 627, T substitution, T at position 633, C Substituted mutation, mutation in which T at position 639 is substituted by G, 65 C-position at position 4 is substituted with T, C-position at position 673 is substituted with T, C-position at position 675 is substituted with A, C-position at position 678 is substituted with T, 681 Variation in which position C is substituted by G, C in position 684 is substituted by G, V in position 705 is substituted by C, V in position 708 is substituted by T, Variation in position 729 A substitution with C, T at position 735, C with substitution, G at 738 with T substitution, T at 741 with C substitution, T at 744 C substitution, T at position 747, A substitution, T at position 771, C substitution, T at position 786, C substitution, C at position 789, C is T Substituted mutation, T at position 792, G substitution, G at position 810, T substitution, T at position 825, C substitution, C at position 828, C is substituted Variation, the substitution of T at position 838 by C, the variation of G at position 840 by C, the variation of C at position 846 by G, the variation at position 849 by G by A, A substitution at position 858 with G, substitution at T at position 867 with C, mutation at position T with C at position 879, substitution at C with position 882, transition at position 885 Variation in which position C is substituted by T, mutation in position 891 is substituted by T, mutation in position 900 is substituted by C, mutation in position 903 is substituted by A, position 906 T is substituted by C, G at position 924 is replaced by T, 936 at position T is substituted by C, 939 at position 939 is substituted by C, A is at position 948 Variation substituted by C, A substitution at C at position 954, V substitution at A at position 963, T substitution at C at position 966, A at position 1026 as G Substituted mutation, G at position 1029 is substituted with C, C at position 1038 Is a mutation substituted with T, a T substitution with C at 1047, a T substitution with C at 1053, a substitution with C at position 1066, a C at position 1068 1 or more, 25 or more, 66 or more, 80 or more, or 91 selected from the group consisting of a mutation substituted with C at position 1086, a substitution at C with position 1110, and a substitution with C at position 1110. Variations can include all.
예컨대, 상기 [X]는 수탁번호 13394BP를 갖는 LMY ver2 변이주의 NSP1 유전자(서열번호 12) 및/또는 NSP1-beta (서열번호 1; 서열번호 12의 5 ' 말단 609개 염기 부위)의 핵산 서열, 또는 상기 핵산서열과 동등한 기능을 유지하는 범위 내에서 70% 이상, 75% 이상, 80% 이상, 85% 이상, 90% 이상, 95% 이상, 96% 이상, 97% 이상, 98% 이상, 99% 이상, 또는 99.5% 이상의 서열 상동성을 갖는 핵산 서열일 수 있다.For example, the [X] is the nucleic acid sequence of the NSP1 gene (SEQ ID NO: 12) and/or NSP1-beta (SEQ ID NO: 1; 5'terminal 609 base site of SEQ ID NO: 12) with the LMY ver2 variant having accession number 13394BP, Or 70% or more, 75% or more, 80% or more, 85% or more, 90% or more, 95% or more, 96% or more, 97% or more, 98% or more, 99 within the range of maintaining the function equivalent to the nucleic acid sequence % Or greater than 99.5% sequence homology.
또한, 상기 [Y]는 수탁번호 KCTC 13393BP를 갖는 BP2017-2 변이주의 ORF2 내지 ORF7 부위의 유전자 핵산 서열 또는 상기 서열과 동등한 기능을 유지하는 범위 내에서 70% 이상, 75% 이상, 80% 이상, 85% 이상, 90% 이상, 95% 이상, 96% 이상, 97% 이상, 98% 이상, 99% 이상, 또는 99.5% 이상의 서열 상동성을 갖는 핵산 서열일 수 있다.In addition, the [Y] is 70% or more, 75% or more, 80% or more within the range of maintaining the gene nucleic acid sequence of the ORF2 to ORF7 region of the BP2017-2 mutant strain having accession number KCTC 13393BP or equivalent function to the sequence, It may be a nucleic acid sequence having a sequence homology of 85% or more, 90% or more, 95% or more, 96% or more, 97% or more, 98% or more, 99% or more, or 99.5% or more.
본 발명의 일 예에 따르면, 상기 구조식 1의 [Y]의 3'말단에 [A]n을 추가로 포함할 수 있다. 상기 n은 염기 A를 포함하는 뉴클레오타이드의 개수로, 10 내지 100의 정수일 수 있다. 바람직하게는 10 내지 80, 10 내지 70, 10 내지 60, 10 내지 50, 10 내지 40, 10 내지 30, 15 내지 80, 15 내지 70, 15 내지 60, 15 내지 50, 15 내지 40, 15 내지 30, 20 내지 30, 20 내지 26의 정수일 수 있다.According to an example of the present invention, [A]n may be further included at the 3'end of [Y] of Structural Formula 1. The n is the number of nucleotides containing the base A, may be an integer of 10 to 100. Preferably 10 to 80, 10 to 70, 10 to 60, 10 to 50, 10 to 40, 10 to 30, 15 to 80, 15 to 70, 15 to 60, 15 to 50, 15 to 40, 15 to 30 , 20 to 30, may be an integer of 20 to 26.
상기 폴리뉴클레오타이드는 RNA, 상기 RNA의 역전사체 (DNA), 또는 이들의 조합일 수 있다. 상기 폴리뉴클레오타이드는 PRRSV 키메라 바이러스의 지놈(genome)으로서의 기능을 가질 수 있다.The polynucleotide may be RNA, reverse transcripts of the RNA (DNA), or a combination thereof. The polynucleotide may function as a genome of the PRRSV chimeric virus.
이에, 본 발명의 다른 예는 상기 구조식 1의 구조를 갖는 폴리뉴클레오타이드를 포함하는 돼지 생식기 호흡기 증후군 바이러스(PRRSV)의 키메라 바이러스를 제공한다. 상기 PRRSV 키메라 바이러스의 지놈은 DNA 또는 RNA일 수 있으며, 바람직하게는 RNA일 수 있다.Accordingly, another example of the present invention provides a chimeric virus of porcine genital respiratory syndrome virus (PRRSV) comprising a polynucleotide having the structure of Structural Formula 1. The genome of the PRRSV chimeric virus may be DNA or RNA, and preferably RNA.
상기 [X]는 수탁번호 13394BP를 갖는 LMY ver2 변이주의 NSP1-beta를 포함하는, NSP1 유전자 부위에 해당하는 것으로, 상기 LMY ver2 변이주의 지놈을 제한효소 AscI과 PacI 로 처리하여 얻어지는 유전자 단편일 수 있으며, 예컨대, 서열번호 1 및/또는 서열번호 12의 핵산 서열, 또는 상기 염기 서열과 동등한 기능을 유지하는 범위 내에서 70% 이상, 75% 이상, 80% 이상, 85% 이상, 90% 이상, 95% 이상, 96% 이상, 97% 이상, 98% 이상, 99% 이상, 또는 99.5% 이상의 서열 상동성을 갖는 핵산 서열을 포함하는 것일 수 있다.The [X] corresponds to the NSP1 gene region, including NSP1-beta of the LMY ver2 mutant with accession number 13394BP, and may be a gene fragment obtained by treating the genome of the LMY ver2 mutant with restriction enzymes AscI and PacI. For example, 70% or more, 75% or more, 80% or more, 85% or more, 90% or more, 95 within a range that maintains the function equivalent to the nucleic acid sequence of SEQ ID NO: 1 and/or SEQ ID NO: 12, or the base sequence % Or more, 96% or more, 97% or more, 98% or more, 99% or more, or 99.5% or more.
상기 [Y]는 수탁번호 KCTC 13393BP를 갖는 BP2017-2 변이주의 ORF2 내지 ORF7 부위에 해당하는 것으로, BP2017-2 변이주의 지놈을 제한효소 AscI 와 PacI 로 처리하여 얻어지는 유전자 단편일 수 있으며, 예컨대, 서열번호 2의 핵산 서열 또는 상기 서열과 동등한 기능을 유지하는 범위 내에서 70% 이상, 75% 이상, 80% 이상, 85% 이상, 90% 이상, 95% 이상, 96% 이상, 97% 이상, 98% 이상, 99% 이상, 또는 99.5% 이상의 서열 상동성을 갖는 핵산 서열 을 포함하는 것일 수 있다.The [Y] corresponds to the ORF2 to ORF7 region of the BP2017-2 mutant strain having accession number KCTC 13393BP, and may be a gene fragment obtained by treating the genome of the BP2017-2 mutant strain with restriction enzymes AscI and PacI, for example, a sequence 70% or more, 75% or more, 80% or more, 85% or more, 90% or more, 95% or more, 96% or more, 97% or more, 98 within a range that maintains the nucleic acid sequence of No. 2 or equivalent function to the sequence % Or more, 99% or more, or 99.5% or more.
일 예에서, 상기 구조식 1은 서열번호 4의 핵산서열 또는 상기 핵산 서열과 동등한 기능을 유지하는 범위 내에서 70% 이상, 75% 이상, 80% 이상, 85% 이상, 90% 이상, 95% 이상, 96% 이상, 97% 이상, 98% 이상, 99% 이상, 또는 99.5% 이상의 서열 상동성을 갖는 핵산 서열을 포함하는 것일 수 있다. 예컨대, 서열번호 4의 핵산서열일 수 있다.In one embodiment, the structural formula 1 is 70% or more, 75% or more, 80% or more, 85% or more, 90% or more, 95% or more within a range maintaining the function equivalent to the nucleic acid sequence of SEQ ID NO: 4 or the nucleic acid sequence , 96% or more, 97% or more, 98% or more, 99% or more, or 99.5% or more. For example, it may be a nucleic acid sequence of SEQ ID NO: 4.
하기 표 1에서, LMY ver2의 NSP1 유전자의 염기서열 중 굵은 글씨료 표시된 부분은 NSP1-beta 부위를 의미한다.In Table 1, the bolded portion of the base sequence of the NSP1 gene of LMY ver2 indicates the NSP1-beta region.
Figure PCTKR2019017319-appb-T000001
Figure PCTKR2019017319-appb-T000001
Figure PCTKR2019017319-appb-I000002
Figure PCTKR2019017319-appb-I000002
Figure PCTKR2019017319-appb-I000003
Figure PCTKR2019017319-appb-I000003
Figure PCTKR2019017319-appb-I000004
Figure PCTKR2019017319-appb-I000004
Figure PCTKR2019017319-appb-T000002
Figure PCTKR2019017319-appb-T000002
Figure PCTKR2019017319-appb-I000005
Figure PCTKR2019017319-appb-I000005
Figure PCTKR2019017319-appb-I000006
Figure PCTKR2019017319-appb-I000006
Figure PCTKR2019017319-appb-I000007
Figure PCTKR2019017319-appb-I000007
Figure PCTKR2019017319-appb-I000008
Figure PCTKR2019017319-appb-I000008
Figure PCTKR2019017319-appb-I000009
Figure PCTKR2019017319-appb-I000009
Figure PCTKR2019017319-appb-I000010
Figure PCTKR2019017319-appb-I000010
Figure PCTKR2019017319-appb-I000011
Figure PCTKR2019017319-appb-I000011
Figure PCTKR2019017319-appb-I000012
Figure PCTKR2019017319-appb-I000012
Figure PCTKR2019017319-appb-I000013
Figure PCTKR2019017319-appb-I000013
Figure PCTKR2019017319-appb-I000014
Figure PCTKR2019017319-appb-I000014
Figure PCTKR2019017319-appb-I000015
Figure PCTKR2019017319-appb-I000015
Figure PCTKR2019017319-appb-I000016
Figure PCTKR2019017319-appb-I000016
(상기 표에서, 본 명세서에서 제공되는 폴리뉴클레오타이드(RNA)는 서열번호 1 내지 4에 제시된 서열 중 T가 U로 치환된 핵산 서열을 포함하는 것일 수 있다.)(In the above table, the polynucleotide (RNA) provided herein may include a nucleic acid sequence in which T is substituted by U among the sequences set forth in SEQ ID NOs: 1 to 4.)
본 발명은 구조식 1의 폴리뉴클레오타이드를 지놈으로 포함하는 PRRSV 키메라 바이러스를 제공한다. 상기 PRRSV 키메라 바이러스는 1 내지 80계대, 1 내지 70계대, 1 내지 60계대, 1 내지 50 계대, 1 내지 40 계대, 1 내지 30 계대, 1 내지 20 계대, 또는 1 내지 10 계대 배양된 자손 바이러스를 포함하는 것일 수 있다.The present invention provides a PRRSV chimeric virus comprising the polynucleotide of structural formula 1 as a genome. The PRRSV chimeric virus is 1 to 80 passages, 1 to 70 passages, 1 to 60 passages, 1 to 50 passages, 1 to 40 passages, 1 to 30 passages, 1 to 20 passages, or 1 to 10 passage cultured progeny viruses It may be included.
[구조식 1][Structural Formula 1]
Figure PCTKR2019017319-appb-I000017
Figure PCTKR2019017319-appb-I000017
상기 식에서, [X]는 수탁번호 13394BP를 갖는 LMY ver2 변이주의 NSP1 유전자 및/또는 NSP1-beta의 핵산 서열 또는 상기 핵산 서열과 70% 이상의 서열 상동성을 갖는 핵산 서열이며, 상기 [Y]는 수탁번호 KCTC 13393BP를 갖는 BP2017-2 변이주의 ORF2 내지 ORF7 부위의 유전자 핵산 서열 또는 상기 핵산 서열과 70% 이상의 서열 상동성을 갖는 핵산 서열이다.In the above formula, [X] is the nucleic acid sequence of the NSP1 gene and/or NSP1-beta of the LMY ver2 variant with accession number 13394BP or a nucleic acid sequence having 70% or more sequence homology with the nucleic acid sequence, and [Y] is the accession The gene nucleic acid sequence of the ORF2 to ORF7 region of the BP2017-2 variant strain having the number KCTC 13393BP or a nucleic acid sequence having 70% or more sequence homology with the nucleic acid sequence.
예컨대, 상기 [X]는 수탁번호 13394BP를 갖는 LMY ver2 변이주의 NSP1 유전자 및/또는 NSP1-beta의 핵산 서열 또는 상기 핵산 서열과 70% 이상, 75% 이상, 80% 이상, 85% 이상, 90% 이상, 95% 이상, 96% 이상, 97% 이상, 98% 이상, 99% 이상, 또는 99.5% 이상의 서열 상동성을 갖는 핵산 서열일 수 있다.For example, the [X] is 70% or more, 75% or more, 80% or more, 85% or more, 90% or more of the nucleic acid sequence of the NSP1 gene and/or NSP1-beta of the LMY ver2 mutant with accession number 13394BP or the nucleic acid sequence. Or more, 95%, 96%, 97%, 98%, 99%, or 99.5% or more nucleic acid sequences.
또한, 상기 [Y]는 수탁번호 KCTC 13393BP를 갖는 BP2017-2 변이주의 ORF2 내지 ORF7 부위의 유전자 핵산 서열 또는 상기 핵산 서열과 70% 이상, 75% 이상, 80% 이상, 85% 이상, 90% 이상, 95% 이상, 96% 이상, 97% 이상, 98% 이상, 99% 이상, 또는 99.5% 이상의 서열 상동성을 갖는 핵산 서열일 수 있다.In addition, the [Y] is 70% or more, 75% or more, 80% or more, 85% or more, 90% or more with the gene nucleic acid sequence or the nucleic acid sequence of the ORF2 to ORF7 region of the BP2017-2 variant strain having accession number KCTC 13393BP , 95%, 96%, 97%, 98%, 99%, or 99.5% or more nucleic acid sequences.
본 발명의 일 예에 따르면, 상기 구조식 1의 [Y]의 3'말단에 [A]n을 추가로 포함할 수 있다. 상기 n은 염기 A를 포함하는 뉴클레오타이드의 개수로, 10 내지 100의 정수일 수 있으며, 예컨대, 10 내지 80, 10 내지 70, 10 내지 60, 10 내지 50, 10 내지 40, 10 내지 30, 15 내지 80, 15 내지 70, 15 내지 60, 15 내지 50, 15 내지 40, 15 내지 30, 20 내지 30, 20 내지 26의 정수일 수 있다.According to an example of the present invention, [A]n may be further included at the 3'end of [Y] of Structural Formula 1. The n is the number of nucleotides containing the base A, may be an integer of 10 to 100, for example, 10 to 80, 10 to 70, 10 to 60, 10 to 50, 10 to 40, 10 to 30, 15 to 80 , 15 to 70, 15 to 60, 15 to 50, 15 to 40, 15 to 30, 20 to 30, may be an integer of 20 to 26.
상기 폴리뉴클레오타이드는 RNA, 상기 RNA의 역전사체 (DNA), 또는 이들의 조합일 수 있다. 상기 폴리뉴클레오타이드는 PRRSV 키메라 바이러스의 지놈(genome)으로서의 기능을 가질 수 있다. 이에, 본 발명의 다른 예는 상기 구조식 1의 구조를 갖는 폴리뉴클레오타이드를 포함하는 돼지 생식기 호흡기 증후군 바이러스(PRRSV)의 키메라 바이러스를 제공한다. 상기 PRRSV 키메라 바이러스의 지놈은 DNA 또는 RNA일 수 있으며, 바람직하게는 RNA일 수 있다.The polynucleotide may be RNA, reverse transcripts of the RNA (DNA), or a combination thereof. The polynucleotide may function as a genome of the PRRSV chimeric virus. Accordingly, another example of the present invention provides a chimeric virus of porcine genital respiratory syndrome virus (PRRSV) comprising a polynucleotide having the structure of Structural Formula 1. The genome of the PRRSV chimeric virus may be DNA or RNA, and preferably RNA.
상기 [X]는 수탁번호 13394BP를 갖는 LMY ver2 변이주의 NSP1-beta를 포함하는, NSP1 유전자 부위에 해당하는 것으로, 상기 LMY ver2 변이주의 지놈을 제한효소 AscI과 PacI 로 처리하여 얻어지는 유전자 단편일 수 있으며, 예컨대, 서열번호 1의 핵산 서열 또는 상기 핵산 서열과 70% 이상, 75% 이상, 80% 이상, 85% 이상, 90% 이상, 95% 이상, 96% 이상, 97% 이상, 98% 이상, 99% 이상, 또는 99.5% 이상의 서열 상동성을 갖는 핵산 서열을 포함하는 것일 수 있다.The [X] corresponds to the NSP1 gene region, including NSP1-beta of the LMY ver2 mutant with accession number 13394BP, and may be a gene fragment obtained by treating the genome of the LMY ver2 mutant with restriction enzymes AscI and PacI. For example, the nucleic acid sequence of SEQ ID NO: 1 or the nucleic acid sequence and 70% or more, 75% or more, 80% or more, 85% or more, 90% or more, 95% or more, 96% or more, 97% or more, 98% or more, It may be a nucleic acid sequence having a sequence homology of 99% or more, or 99.5% or more.
상기 [Y]는 수탁번호 KCTC 13393BP를 갖는 BP2017-2 변이주의 ORF2 내지 ORF7 부위에 해당하는 것으로, BP2017-2 변이주의 지놈을 제한효소 AscI 와 PacI 로 처리하여 얻어지는 유전자 단편일 수 있으며, 예컨대, 서열번호 2의 핵산 서열 또는 상기 핵산 서열과 70% 이상, 75% 이상, 80% 이상, 85% 이상, 90% 이상, 95% 이상, 96% 이상, 97% 이상, 98% 이상, 99% 이상, 또는 99.5% 이상의 서열 상동성을 갖는 핵산 서열을 포함하는 것일 수 있다.The [Y] corresponds to the ORF2 to ORF7 region of the BP2017-2 mutant strain having accession number KCTC 13393BP, and may be a gene fragment obtained by treating the genome of the BP2017-2 mutant strain with restriction enzymes AscI and PacI, for example, a sequence The nucleic acid sequence of No. 2 or 70% or more, 75% or more, 80% or more, 85% or more, 90% or more, 95% or more, 96% or more, 97% or more, 98% or more, 99% or more with the nucleic acid sequence, Or it may include a nucleic acid sequence having a sequence homology of 99.5% or more.
일 예에서, 상기 구조식 1은 서열번호 4의 핵산서열 또는 상기 핵산 서열과을 70% 이상, 75% 이상, 80% 이상, 85% 이상, 90% 이상, 95% 이상, 96% 이상, 97% 이상, 98% 이상, 99% 이상, 또는 99.5% 이상의 서열 상동성을 갖는 핵산 서열을 포함하는 것일 수 있다. 예컨대, 서열번호 4의 핵산서열일 수 있다.In one example, the structural formula 1 is 70% or more, 75% or more, 80% or more, 85% or more, 90% or more, 95% or more, 96% or more, 97% or more of the nucleic acid sequence of SEQ ID NO: 4 or the nucleic acid sequence , 98% or more, 99% or more, or 99.5% or more. For example, it may be a nucleic acid sequence of SEQ ID NO: 4.
일 구체예는 지놈으로서 서열번호 4의 폴리뉴클레오타이드를 포함하는 핵산서열을 포함하는 상기 PRRSV 키메라 바이러스를 제공하며, 이를 LMY+BP2017라고 명명하였다. 상기 LMY+BP2017 바이러스는 수탁번호 KCTC 13394BP 을 갖는 바이러스일 수 있다.One embodiment provides the PRRSV chimeric virus comprising a nucleic acid sequence comprising the polynucleotide of SEQ ID NO: 4 as a genome, which was named LMY+BP2017. The LMY+BP2017 virus may be a virus having accession number KCTC 13394BP.
상기 LMY+BP2017 키메라 바이러스의 뼈대가 되는, LMY ver2 변이주는 LMY 모균주(Accession No. GenBank accession no.DQ473474.1.)의 서열번호 5의 Nonstructural protein 1 (NSP1)에 포함된 적어도 하나의 염기가 치환된 변이 NSP1-beta를 포함하는 PRRSV 변이주일 수 있다.At least one base contained in the nonstructural protein 1 (NSP1) of SEQ ID NO: 5 of the LMY parent strain (Accession No. GenBank accession no.DQ473474.1.), which forms the skeleton of the LMY+BP2017 chimeric virus, The substituted variant may be a PRRSV variant strain comprising NSP1-beta.
상기 LMY 균주의 NSP1 및/또는 NSP1-beta를 암호화하는 유전자의 염기서열에서 치환되는 염기서열은 공지되어 있는 SAVE(Synthetic Attenuated Virus Engineering) 프로그램을 사용하여 선택된 것일 수 있으며, 바람직하게는, 본 발명자들이 개발한 SAVE 프로그램을 이용하여 선택한 것일 수 있다. 구체적으로, 모균주인 LMY 의 genome에서 유전적으로 안전성이 높은 NSP1 부위를 본 발명자들이 자체 개발한 SAVE 프로그램으로 분석하여 비교적 Codon Pair Bias (CPB)가 높은 곳을 나타난 염기 서열의 일부 또는 전체를 선택해 치환하여 Deoptimization 시킨 염기서열일 수 있다. 상기 Deoptimization시킨 염기 서열은, 서열번호 11의 염기서열로 이루어지는 LMY 균주의 NSP1 단백질을 암호화하는 유전자의 222번 위치의 G가 C로 치환된 변이, 225번 위치의 C가 A로 치환된 변이, 237번 위치의 T가 C로 치환된 변이, 240번 위치의 A가 T로 치환된 변이, 252번 위치의 T가 C로 치환된 변이, 306번 위치의 A가 C로 치환된 변이, 309번 위치의 T가 C로 치환된 변이, 312번 위치의 G가 A로 치환된 변이, 315번 위치의 C가 A로 치환된 변이, 324번 위치의 T가 C로 치환된 변이, 327번 위치의 C가 G로 치환된 변이, 330번 위치의 G가 A로 치환된 변이, 333번 위치의 C가 T로 치환된 변이, 336번 위치의 C가 G로 치환된 변이, 339번 위치의 T가 C로 치환된 변이, 342번 위치의 A가 T로 치환된 변이, 345번 위치의 T가 A로 치환된 변이, 357번 위치의 A가 G로 치환된 변이, 363번 위치의 T가 A로 치환된 변이, 366번 위치의 T가 C로 치환된 변이, 378번 위치의 C가 T로 치환된 변이, 379번 위치의 C가 A로 치환된 변이, 381번 위치의 C가 G로 치환된 변이, 393번 위치의 T가 C로 치환된 변이, 396번 위치의 T가 A로 치환된 변이, 543번 위치의 T가 C로 치환된 변이, 546번 위치의 T가 C로 치환된 변이, 549번 위치의 C가 A로 치환된 변이, 555번 위치의 T가 C로 치환된 변이, 558번 위치의 T가 C로 치환된 변이, 561번 위치의 T가 A로 치환된 변이, 573번 위치의 C가 T로 치환된 변이, 579번 위치의 T가 C로 치환된 변이, 582번 위치의 G가 T로 치환된 변이, 588번 위치의 T가 C로 치환된 변이, 612번 위치의 T가 C로 치환된 변이, 618번 위치의 G가 C로 치환된 변이, 621번 위치의 T가 C로 치환된 변이, 627번 위치의 A가 T로 치환된 변이, 633번 위치의 T가 C로 치환된 변이, 639번 위치의 T가 G로 치환된 변이, 654번 위치의 C가 T로 치환된 변이, 673번 위치의 C가 T로 치환된 변이, 675번 위치의 C가 A로 치환된 변이, 678번 위치의 C가 T로 치환된 변이, 681번 위치의 C가 G로 치환된 변이, 684번 위치의 C가 G로 치환된 변이, 705번 위치의 G가 C로 치환된 변이, 708번 위치의 C가 T로 치환된 변이, 729번 위치의 A가 C로 치환된 변이, 735번 위치의 T가 C로 치환된 변이, 738번 위치의 G가 T로 치환된 변이, 741번 위치의 T가 C로 치환된 변이, 744번 위치의 T가 C로 치환된 변이, 747번 위치의 T가 A로 치환된 변이, 771번 위치의 T가 C로 치환된 변이, 786번 위치의 T가 C로 치환된 변이, 789번 위치의 C가 T로 치환된 변이, 792번 위치의 T가 G로 치환된 변이, 810번 위치의 C가 T로 치환된 변이, 825번 위치의 T가 C로 치환된 변이, 828번 위치의 C가 T로 치환된 변이, 838번 위치의 T가 C로 치환된 변이, 840번 위치의 G가 C로 치환된 변이, 846번 위치의 C가 G로 치환된 변이, 849번 위치의 G가 A로 치환된 변이, 858번 위치의 A가 G로 치환된 변이, 867번 위치의 T가 C로 치환된 변이, 879번 위치의 T가 C로 치환된 변이, 882번 위치의 C가 G로 치환된 변이, 885번 위치의 C가 T로 치환된 변이, 891번 위치의 C가 T로 치환된 변이, 900번 위치의 T가 C로 치환된 변이, 903번 위치의 C가 A로 치환된 변이, 906번 위치의 T가 C로 치환된 변이, 924번 위치의 G가 T로 치환된 변이, 936번 위치의 T가 C로 치환된 변이, 939번 위치의 T가 C로 치환된 변이, 948번 위치의 A가 C로 치환된 변이, 954번 위치의 A가 C로 치환된 변이, 963번 위치의 A가 T로 치환된 변이, 966번 위치의 T가 C로 치환된 변이, 1026번 위치의 A가 G로 치환된 변이, 1029번 위치의 G가 C로 치환된 변이, 1038번 위치의 C가 T로 치환된 변이, 1047번 위치의 T가 C로 치환된 변이, 1053번 위치의 T가 C로 치환된 변이, 1066번 위치의 A가 C로 치환된 변이, 1068번 위치의 A가 C로 치환된 변이, 1086번 위치의 C가 T로 치환된 변이, 및 1110번 위치의 T가 C로 치환된 변이로 이루어진 군에서 선택된 1 이상, 25 이상, 66 이상, 80 이상, 또는 상기 91개 변이 모두를 포함하는 것일 수 있으나, 이에 제한되지 않는다.The nucleotide sequence substituted in the nucleotide sequence of the gene encoding NSP1 and/or NSP1-beta of the LMY strain may be selected using a known SAVE (Synthetic Attenuated Virus Engineering) program, preferably, the present inventors It may be selected using the developed SAVE program. Specifically, the genetically safe NSP1 region in the genome of the parent strain LMY was analyzed by the SAVE program developed by the present inventors, and selected or substituted for a part or all of the nucleotide sequence showing a relatively high Codon Pair Bias (CPB). It may be a base sequence deoptimized. The deoptimization of the base sequence, a mutation in which the G at position 222 of the gene encoding the NSP1 protein of the LMY strain consisting of the base sequence of SEQ ID NO: 11 is substituted with C, and the mutation at C at position 225 is substituted with A, 237 A mutation in position T replaced by C, a mutation in position 240 replaced by T, a mutation in position 252 replaced by C, a mutation in position 306 replaced by C, a position 309 Of T is substituted by C, G of 312 is substituted by A, C of 315 is substituted by A, 324 of T is substituted by C, C of 327 Is a G substitution, G at position 330 is substituted with A, C at position 333 is substituted with T, C at position 336 is substituted with G, T at position 339 is C , A substitution at position 342, T substitution, T substitution at position 345, A substitution, substitution at position A at 357, G substitution, T at position 363, substitution at A Mutation, mutation in which T at position 366 is replaced by C, mutation in which C at position 378 is substituted by T, mutation in which C at position 379 is substituted by A, mutation at position 381 where C is substituted by G , Mutation in which T at position 393 is substituted by C, mutation in which T at position 396 is substituted by A, mutation at which T at position 543 is substituted by C, mutation at which T at position 546 is substituted by C, 549 C substitution at position A is substituted by A, T at position 555 is substituted by C, T at position 558 is substituted by C, T at position 561 is substituted by A, Variation at position 573 Of C is substituted with T, 579 of T is substituted with C, 582 of G is substituted with T, 588 of T is substituted with C, T of 612 Is a mutation substituted by C, a G substitution at position 618, a substitution at C at position 621, a substitution at C at position 621, a substitution at position A at position 627 by T, and a T at position 633 is C. Substituted with 63 Variation where T at position 9 is replaced by G, V substitution at C at position 654, T substitution at C at position 673, V substitution at C at position 675, 678 Variation in which position C is substituted by T, mutation in position 681 is substituted by G, mutation in position 684 is substituted by G, mutation in position 705 is substituted by C, position 708 C is a substitution with T, A at position 729 is substituted with C, a 735 position is substituted with C, a 738 position is replaced with G, and a T is substituted with T. C substitution, T at position 744, C substitution, T at position 747, A substitution, T at position 771, C substitution, C at position 786, C Substituted mutation, C substitution at position 789, T substitution at position 792, G substitution at position 792, C substitution at position 810, substitution at T, 825 position at T substitution at C Variation, the substitution of C at position 828 with T, the variation of T at position 838 with C, the variation of G at position 840 with C, the variation of C at position 846 with G, Variation in which G at position 849 is substituted by A, mutation in which A is replaced by G at position 858, mutation in which T at position 867 is substituted for C, mutation at which T at position 879 is substituted by C, 882 Variation in which position C is substituted with G, mutation in position 885 is substituted by T, mutation in position 891 is substituted by T, mutation in position 900 is substituted by C, position at 903 C is substituted with A, T at position 906 is substituted with C, G at position 924 is substituted with T, T at position 936 is substituted with C, T at position 939 Variation substituted with C, A substituted with C at position 948, A substituted with C at position 954, V substituted with A at position 963 with T, T at position 966 with C Substituted mutation, A at position 1026 is substituted with G, G at position 1029 is C substitution, C substitution at position 1038, T substitution, C substitution at position 1047, C substitution, C substitution at position 1053, C substitution, C at position 1066, C 1 or more, 25 or more selected from the group consisting of a substituted mutation, a mutation in which A at position 1068 is substituted by C, a mutation in which C at position 1086 is substituted by T, and a mutation in which T at position 1110 is substituted by C. , 66 or more, 80 or more, or may include all of the 91 variations, but is not limited thereto.
상기 SAVE 프로그램을 사용해 바이러스 유전자 코돈이 쌍으로 배열 시 상호작용하여 생기는 편향성인, CPB를 컴퓨터 알고리즘을 이용해 수치화할 수 있으며, 바이러스의 증식성은 CPB 수치가 감소(deoptimization)되면 증식성이 감소하고, 약독화 되므로(Virus Attenuation by Genome-Scale Changes in Codon Pair Bias, Science, 2008, J. Robert Coleman et al.), CPB 수치가 높은 일부 염기서열을 CPB 수치가 낮은 염기서열로 치환하거나, 바람직하게는 Codon Pair Deoptimization 원리에 따라 침묵 돌연변이(silent mutation) 시켜 본 발명의 키메라 바이러스 제조에 사용되는 약독화된 LMY ver2 변이주를 제조할 수 있다. 상기 LMY ver2 변이주는 서열번호 6의 염기서열로 이루어진, NSP1-beta 단백질을 암호화하는 유전자, 또는 서열번호 12의 염기서열로 이루어진, NSP1 단백질을 암호화하는 유전자를 포함할 수 있다.The SAVE program can be used to quantify CPB, which is a bias caused by interaction when viral gene codons are arranged in pairs, using a computer algorithm, and the proliferation of the virus is reduced when the CPB value is deoptimized, and attenuated. (Virus Attenuation by Genome-Scale Changes in Codon Pair Bias, Science, 2008, J. Robert Coleman et al.), to replace some sequences with high CPB levels with sequences with low CPB levels, preferably Codon Silent mutation according to the Pair Deoptimization principle can produce an attenuated LMY ver2 mutant used in the preparation of the chimeric virus of the present invention. The LMY ver2 mutant may include a gene encoding the NSP1-beta protein consisting of the nucleotide sequence of SEQ ID NO: 6, or a gene encoding the NSP1 protein consisting of the nucleotide sequence of SEQ ID NO: 12.
또한, 본 발명은 본 발명의 PRRSV 키메라 바이러스의 지놈를 포함하는 세포를 제공할 수 있다. 상기 세포는 상기 키메라 바이러스를 다량 제조하기 위해, 상기 키메라 바이러스의 지놈(DNA, RNA, 또는 이를 포함하는 벡터), 또는 상기 지놈을 포함하는 키메라 바이러스가 트랜스펙션되는 세포를 의미하며, 상기 목적 범위 내라면 세포의 종류를 특별히 한정하지는 않는다.In addition, the present invention can provide cells comprising the genome of the PRRSV chimeric virus of the present invention. The cell refers to a cell in which the chimeric virus genome (DNA, RNA, or a vector containing the same) or the chimeric virus containing the genome is transfected in order to manufacture the chimeric virus in large quantities. Inside, the type of cells is not particularly limited.
본 발명의 일 예에 따르면, 상기 PRRSV의 키메라 바이러스 또는 이의 계대 배양된 자손을 포함하는 돼지 생식기 호흡기 증후군 바이러스 백신 조성물을 제공할 수 있다.According to an example of the present invention, it is possible to provide a porcine genital respiratory syndrome virus vaccine composition comprising the PRRSV chimeric virus or a passaged cultured progeny thereof.
상기 계대 배양된 자손은 1 내지 80계대, 1 내지 70계대, 1 내지 60계대, 1 내지 50 계대, 1 내지 40 계대, 1 내지 30 계대, 1 내지 20 계대, 또는 1 내지 10 계대 배양된 자손 바이러스를 포함하는 것일 수 있다.The passaged cultured progeny is a progeny virus cultured from 1 to 80 passages, 1 to 70 passages, 1 to 60 passages, 1 to 50 passages, 1 to 40 passages, 1 to 30 passages, 1 to 20 passages, or 1 to 10 passages It may be to include.
본 발명의 일 예에 따르면, 상기 백신은 생백신 또는 사백신일 수 있으나, 생백신인 것이 바람직하다. 구체적으로, 본원에 기술된 약독화된 PRRS 키메라 바이러스는 약제학적으로 허용되는 담체에 전술한 하나 이상의 바이러스주를 생존 상태로 함유하는 변형 생백신일 수 있다. 또한, 또는 대안적으로, 불활성화된 바이러스를 사백신을 제조하는 데에도 사용할 수 있다.According to an example of the present invention, the vaccine may be a live vaccine or a four vaccine, but is preferably a live vaccine. Specifically, the attenuated PRRS chimeric virus described herein may be a modified live vaccine containing, in a surviving state, one or more virus strains described above in a pharmaceutically acceptable carrier. Alternatively, or alternatively, an inactivated virus can be used to prepare a vaccine.
상기 백신은 담체, 희석제, 부형제, 및 어주번트(adhuvant)로 이루어진 군에서 선택되는 1 이상을 더 포함할 수 있다. 약제학적으로 허용되는 담체는 그 종류를 특별히 한정하지 않으나, 임의의 모든 용매, 분산 매질, 코팅, 안정제, 보존제, 항균제 및 항진균제, 등장제, 흡수지연제 등을 포함할 수 있다.The vaccine may further include one or more selected from the group consisting of carriers, diluents, excipients, and adhuvants. The pharmaceutically acceptable carrier is not particularly limited in its kind, and may include any and all solvents, dispersion media, coatings, stabilizers, preservatives, antibacterial and antifungal agents, isotonic agents, absorption delaying agents, and the like.
한편, 백신 조성물에 포함된 본 발명의 약독화 키메라 바이러스의 유효량은 바이러스의 유효 용량이 투여된 동물에서 면역 반응을 유인하거나 유인할 수 있는 바이러스의 양일 수 있다. 유효한 양은 백신 성분 및 투여 스케줄에 의존적일 수 있다. 백신 조성물의 투여량은 TCID50 2 내지 6, 바람직하게는 3 내지 4, 범위이나, 개체의 종류에 따라 달라 질 수 있으며, 이에 제한되지 않는다.On the other hand, the effective amount of the attenuated chimeric virus of the present invention included in the vaccine composition may be the amount of the virus that can attract or induce an immune response in animals to which the effective dose of the virus has been administered. The effective amount may depend on the vaccine components and dosing schedule. The dosage of the vaccine composition is in the range of TCID 50 2 to 6, preferably 3 to 4, but may vary depending on the type of individual, but is not limited thereto.
본 발명의 LMY-BP2017 키메라 바이러스의 지놈, 및 이를 포함하는 백신 조성물은 PRRS 질환의 영향으로부터 돼지를 예방하기 위해 사용될 수 있다. 또한, PRRS 키메라 바이러스의 면역원성 단편 또는 분획을 비롯한 서브유닛도 PRRS 질환의 영향으로부터 돼지를 예방하는데 사용될 수 있다. 본 발명의 약독화된 키메라 바이러스 또는 이를 포함하는 백신 조성물은 PRRS를 유발하는 PRRS 바이러스주에 돼지가 노출되기 전에 예방적으로 투여될 수 있고, 상기 바이러스주에 돼지가 노출됨과 동시에 돼지에 투여될 수 있고, 바이러스주에 표적 돼지가 노출된 후 치료적으로 투여될 수 있다.The genome of the LMY-BP2017 chimeric virus of the present invention, and a vaccine composition comprising the same, can be used to prevent swine from the effects of PRRS disease. In addition, subunits, including immunogenic fragments or fractions of the PRRS chimeric virus, can also be used to prevent swine from the effects of PRRS disease. The attenuated chimeric virus of the present invention or a vaccine composition comprising the same can be administered prophylactically before the pig is exposed to the PRRS-inducing PRRS virus strain, and can be administered to the pig at the same time the pig is exposed to the virus strain. And can be administered therapeutically after exposure of the target pig to the virus strain.
본 발명이 제공하는 백신 조성물은 돼지 생식기 호흡기 증후군(PRRS)의 예방, 예를 들어 북미형 PRRSV에 의해 발병하는 PRRS의 예방에 이용될 수 있다. 일 예에서 상기 북미형 PRRSV는 타입 II형 VR2332 바이러스 균주(strain)일 수 있다.The vaccine composition provided by the present invention may be used for prevention of porcine genital respiratory syndrome (PRRS), for example, PRRS caused by North American PRRSV. In one example, the North American PRRSV may be a type II type VR2332 virus strain.
본 발명의 약독화된 PRRSV 키메라 바이러스, 또는 이를 포함하는 백신 조성물은 경구, 비경구, 피하, 근육내, 피내, 설하, 경피, 직장, 경점막, 흡입을 통한 표면적, 협측 투여를 통해, 또는 이의 조합으로 투여될 수 있다. 또한, 약독화된 PRRS 키메라 바이러스는 약독화된 바이러스의 서방출을 허용할 수 있는 이식체 형태로 투여될 수 있다.The attenuated PRRSV chimeric virus of the present invention, or a vaccine composition comprising the same, is oral, parenteral, subcutaneous, intramuscular, intradermal, sublingual, transdermal, rectal, transmucosal, surface area via inhalation, buccal administration, or its It can be administered in combination. In addition, the attenuated PRRS chimeric virus can be administered in the form of an implant capable of allowing sustained release of the attenuated virus.
본 발명의 약독화된 PRRSV 키메라 바이러스 또는 이를 포함하는 백신 조성물은 주사, 흡입 또는 이식을 통해 투여될 수 있고, 주사가 특히 바람직하다. 백신접종 또는 치료의 원하는 기간 및 유효성에 따라 약독화된 PRRSV 키메라 바이러스 또는 이를 포함하는 백신 조성물은 1회 또는 여러 번, 또한 간헐적으로, 예컨대 수일, 수주 또는 수개월 동안 매일 다른 투여량으로 투여될 수 있다. 주사는 원하는 양으로 주사하거나 피하 혹은 비강에 분무하여 주입할 수 있다, 또는 대안적으로 연속 주입할 수 있다.The attenuated PRRSV chimeric virus of the present invention or a vaccine composition comprising the same can be administered via injection, inhalation or transplantation, with injection being particularly preferred. Depending on the desired duration and effectiveness of vaccination or treatment, the attenuated PRRSV chimeric virus or vaccine composition comprising the same may be administered once or several times, and also intermittently at different dosages daily, such as for days, weeks or months. . The injection can be given in the desired amount or by subcutaneous or nasal spraying, or alternatively continuous injection.
본 발명의 일 예에 따르면 상기 본 발명의 PRRSV 키메라 바이러스는 상기 키메라 바이러스와 이의 모균주(Accession No. GenBank accession no.DQ473474.1.)를 돼지의 폐 대식세포에 접종하고 측정한 바이러스의 TCID50의 값이, 모균주의 TCID50 값에 비해 0.01 배 내지 0.1배의 TCID50 값을 갖는 바이러스일 수 있다. 바람직하게는 상기 측정기간은 2일 후이며, 상기 TCID50 값은 0.05배 내지 0.1배 일 수 있다. 본 발명의 PRRSV 키메라 바이러스는 모균주 보다 낮은 TCID50 값을 가지며, 모균주보다 증식성이 감소되고 약독화 되어있다.According to an example of the present invention, the PRRSV chimera virus of the present invention is the TCID 50 of the virus measured by inoculating the chimeric virus and its parent strain (Accession No. GenBank accession no.DQ473474.1.) in pig lung macrophages. The value of can be a virus having a TCID 50 value of 0.01 to 0.1 times compared to the TCID 50 value of the parent strain. Preferably, the measurement period is 2 days later, and the TCID 50 value may be 0.05 to 0.1 times. The PRRSV chimeric virus of the present invention has a TCID 50 value lower than that of the parent strain, and is less attenuated and proliferative than the parent strain.
또한, 본 발명의 PRRSV 키메라 바이러스와 이의 모균주(Accession No. GenBank accession no.DQ473474.1.)를 돼지에 접종하고 측정한 변이주의 중화 항체 함량이, 모균주의 2배 내지 8배, 바람직하게는 2배 내지 4배를 갖는 바이러스를 제공한다. 상기 측정기간은 적절하게는 28일 후인 것이 바람직하다. 중화항체라 함은 대표적인 북미형 PRRSV 균주인 VR2332에 대항하는 중화능력을 보유한 항체를 의미한다. 따라서, 본 발명의 약독화된 키메라 바이러스 또는, 이를 포함하는 백신조성물을 돼지에 접종할 경우, 돼지의 중화항체의 역가가 증가시키며 돼지의 면역인자의 발현을 증가시켜 PRRS에 대한 면역 효과를 현저히 상승시킬 수 있다.In addition, the PRRSV chimeric virus of the present invention and its parent strain (Accession No. GenBank accession no.DQ473474.1.) were inoculated in pigs and the neutralizing antibody content of the mutant strain measured was 2 to 8 times, preferably Provides a virus with 2 to 4 fold. Preferably, the measurement period is 28 days later. The term neutralizing antibody means an antibody having a neutralizing ability against VR2332, a representative North American PRRSV strain. Therefore, when the attenuated chimera virus of the present invention or a vaccine composition containing the same is inoculated into a pig, the titer of the neutralizing antibody of the pig increases and the immune effect on PRRS is significantly increased by increasing the expression of the pig's immune factor. I can do it.
일 구체예에 따르면, 상기에서 기술한 본 발명의 PRRSV 키메라 바이러스 LMY+BP2017의 CPB수치는 LMY 모균주(Accession No. GenBank accession no.DQ473474.1.)보다 낮은 수치를 나타내며, 바람직하게는 -0.39 내지 0, 더욱 바람직하게는 -0.35 내지 -0.20, 적절하게는 -0.35 내지 -0.26, 예를 들어 -0.2393184052058128일 수 있다. CPB 수치가 -0.39 미만일 경우, 바이러스 작출에 어려움이 있으며, 0을 초과할 경우, 작출은 가능하나 증식성이 감소하지 않아 약독화 되지 않는다는 문제점이 있다. 따라서, 본 발명의 약독화된 LMY+BP2017 키메라 바이러스는 상기 CPB 수치를 갖는 것이 바람직하다.According to one embodiment, the CPB value of the PRRSV chimeric virus LMY+BP2017 of the present invention described above represents a lower value than the LMY parent strain (Accession No. GenBank accession no.DQ473474.1.), preferably -0.39 To 0, more preferably -0.35 to -0.20, suitably -0.35 to -0.26, for example -0.2393184052058128. When the CPB level is less than -0.39, it is difficult to produce a virus, and when it exceeds 0, the operation is possible, but there is a problem in that the proliferation does not decrease and thus is not attenuated. Therefore, the attenuated LMY+BP2017 chimeric virus of the present invention preferably has the CPB level.
또한, 본 발명은 CpG, UpA 수치가 모균주(Accession No. GenBank accession no.DQ473474.1.) 의 1.0배 내지 3.0배를 갖는 LMY+BP2017 키메라 바이러스를 제공한다. CpG, UpA 비율의 변화는 deoptimization 과정에서 필연적으로 발생하는 결과로서, 진핵세포 유전자의 CpG, UpA의 수치를 증가시키면, cell stress를 유발하여 바이러스의 증식성이 감소되어 바이러스를 약독화 시킬 수 있다. 본 발명의 LMY+BP2017 키메라 바이러스는 모균주보다 높은 CpG, UpA 수치를 가지며, 바람직하게는 모균주의 1.0배 내지 3.0배 높은 수치를 갖고, 예를 들어 상기 본 발명의 약독화된 키메라 바이러스의 CpG는 1.1753, UpA 는 1.03 일 수 있다.In addition, the present invention provides an LMY+BP2017 chimeric virus having a CpG, UpA value of 1.0 to 3.0 times that of a parent strain (Accession No. GenBank accession no.DQ473474.1.). Changes in the ratio of CpG and UpA inevitably occur during the deoptimization process. When the CpG and UpA levels of the eukaryotic gene are increased, cell proliferation is reduced and the virus is attenuated, thereby attenuating the virus. The LMY+BP2017 chimeric virus of the present invention has higher CpG and UpA levels than the parent strain, preferably 1.0 to 3.0 times higher than the parent strain, for example, CpG of the attenuated chimeric virus of the present invention. May be 1.1753, and UpA may be 1.03.
본 발명의 일 예에 따르면, 수탁번호 13394BP를 갖는 LMY ver2 변이주의 지놈을 제한효소 AscI과 PacI 로 처리하여 폴리뉴클레오타이드 절편을 제조하는 단계, 수탁번호 KCTC 13393BP를 갖는 BP2017-2 변이주의 지놈을 제한효소 AscI 와 PacI 로 처리하여 폴리뉴클레오타이드 절편을 제조하는 단계, 및 상기 LMY ver 2의 폴리뉴클레오타이드 절편과 BP2017-2의 폴리뉴클레오타이드 절편을 재조합하여 감염성 클론(infectious clone)을 제조하는 단계를 포함하는, 돼지 생식기 호흡기 증후군 바이러스의 키메라 바이러스를 생산하는 방법을 제공할 수 있다.According to an example of the present invention, the genome of the LMY ver2 mutant with accession number 13394BP is treated with restriction enzymes AscI and PacI to prepare a polynucleotide fragment, and the genome of BP2017-2 mutation having accession number KCTC 13393BP is restricted. A step of preparing a polynucleotide fragment by treating with AscI and PacI, and recombining the polynucleotide fragment of LMY ver 2 with the polynucleotide fragment of BP2017-2 to prepare an infectious clone, a pig genital organ A method of producing the chimeric virus of the respiratory syndrome virus can be provided.
상기 LMY ver2 변이주의 지놈을 제한효소 AscI과 PacI 로 처리하여 제조된 폴리뉴클레오타이드 절편은 NSP1-beta를 암호화하는 부위를 포함할 수 있다.The polynucleotide fragment prepared by treating the genome of the LMY ver2 mutant with restriction enzymes AscI and PacI may include a region encoding NSP1-beta.
상기 BP2017-2 변이주의 지놈을 제한효소 AscI 와 PacI 로 처리하여 제조된 폴리뉴클레오타이드 절편은 ORF2 내지 ORF7 부위를 포함할 수 있다.The polynucleotide fragment prepared by treating the genome of the BP2017-2 mutant with restriction enzymes AscI and PacI may include ORF2 to ORF7 sites.
상기 절편을 재조합하는 단계에서 리가아제(ligase)를 사용할 수 있으며, 상기 제조한 감염성 클론을 세포에 접종해 키메라 바이러스를 제조할 수 있다.In the step of recombining the fragments, ligase may be used, and the infectious clone prepared above may be inoculated into cells to prepare a chimeric virus.
상기 세포는 키메라 바이러스를 다량 제조하기 위해, 키메라 바이러스 DNA 또는 RNA, 또는 이를 포함하는 벡터, 감염성 클론, 키메라 바이러스가 트랜스펙션되는 세포를 의미하며, 세포의 종류를 특별히 한정하지는 않는다.The cell refers to a cell in which a chimeric virus DNA or RNA, or a vector containing it, an infectious clone, or a chimeric virus is transfected, in order to prepare a large amount of the chimeric virus, and does not specifically limit the type of cell.
또한, 본 발명의 일 실시예는 상기 백신 조성물을 포함하는, 돼지 생식기 호흡기 증후군의 예방 또는 치료용 조성물을 제공할 수 있다.In addition, an embodiment of the present invention may provide a composition for preventing or treating porcine genital respiratory syndrome, including the vaccine composition.
바람직한 형태로서, 본 발명의 돼지 생식기 호흡기 증후군의 예방 또는 치료용 조성물은 당업자에게 공지된 추가 성분을 포함할 수 있고, 약학적 조성물의 제조에 통상적으로 사용하는 적절한 담체, 부형제 및 희석제를 더 포함할 수 있다.In a preferred form, the composition for preventing or treating porcine reproductive and respiratory syndrome of the present invention may include additional components known to those skilled in the art, and further include suitable carriers, excipients and diluents commonly used in the manufacture of pharmaceutical compositions. Can.
또한 통상의 방법에 따라 산제, 과립제, 정제, 캡슐제, 현탁액, 에멀젼, 시럽, 에어로졸 등의 경구형 제형, 외용제, 좌제 및 멸균 주사용액의 형태로 제형화하여 사용될 수 있다. 당해 기술 분야에 알려진 적합한 제제는 문헌 (Remington's Pharmaceutical Science, 최근, Mack Publishing Company, Easton PA)에 개시되어 있는 것을 사용하는 것이 바람직하다In addition, it can be formulated and used in the form of oral formulations, external preparations, suppositories, and sterile injectable solutions such as powders, granules, tablets, capsules, suspensions, emulsions, syrups, aerosols, etc. according to a conventional method. Suitable formulations known in the art are preferred to use those disclosed in Remington's Pharmaceutical Science, recently Mack Publishing Company, Easton PA.
본 발명의 약학적 조성물에 포함될 수 있는 담체, 부형제 및 희석제로는 락토오스, 덱스트로오스, 수크로오스, 소르비톨, 만니톨, 자일리톨, 에리스리톨, 말티톨, 전분, 아카시아 고무, 알지네이트, 젤라틴, 칼슘포스페이트, 칼슘 실리케이트, 셀룰로오스, 메틸 셀룰로오스, 미정질 셀룰로오스, 폴리비닐 피롤리돈, 물, 메틸히드록시 벤조에이트, 프로필히드록시 벤조에이트, 탈크, 마그네슘 스테아레이트 및 광물유 등이 있다. 상기 조성물을 제제화할 경우에는 보통 사용하는 충진제, 증량제, 결합제, 습윤제, 붕해제, 계면활성제 등의 희석제 또는 부형제를 사용하여 조제된다. 경구투여를 위한 고형제제에는 정제, 환제, 산제, 과립제, 캡슐제 등이 포함되며, 이러한 고형제제는 상기 조성물에 적어도 하나 이상의 부형제 예를 들면, 전분, 칼슘 카보네이트, 수크로오스, 락토오스, 젤라틴 등을 섞어 조제된다. 또한 단순한 부형제 이외에 마그네슘 스테아레이트, 탈크 같은 윤활제들도 사용된다. 경구투여를 위한 액상 제제로는 현탁제, 내용액제, 유제, 시럽제 등이 해당되는데 흔히 사용되는 단순 희석제인 물, 리퀴드 파라핀 이외에 여러 가지 부형제, 예를 들면 습윤제, 감미제, 방향제, 보존제 등이 포함될 수 있다. 비경구 투여를 위한 제제에는 멸균된 수용액, 비수성용제, 현탁제, 유제, 동결건조 제제, 좌제가 포함된다. 비수성용제, 현탁제로는 프로필렌글리콜, 폴리에틸렌 글리콜, 올리브 오일과 같은 식물성 기름, 에틸올레이트와 같은 주사 가능한 에스테르 등이 사용될 수 있다. 좌제의 기제로는 위텝솔, 마크로골, 트윈61, 카카오지, 라우린지, 글리세로제라틴 등이 사용될 수 있다.Carriers, excipients and diluents that may be included in the pharmaceutical compositions of the present invention include lactose, dextrose, sucrose, sorbitol, mannitol, xylitol, erythritol, maltitol, starch, acacia rubber, alginate, gelatin, calcium phosphate, calcium silicate, Cellulose, methyl cellulose, microcrystalline cellulose, polyvinyl pyrrolidone, water, methylhydroxy benzoate, propylhydroxy benzoate, talc, magnesium stearate and mineral oil. When formulating the composition, it is usually prepared using diluents or excipients such as fillers, extenders, binders, wetting agents, disintegrating agents, surfactants, and the like. Solid preparations for oral administration include tablets, pills, powders, granules, capsules, etc., and these solid preparations contain at least one excipient such as starch, calcium carbonate, sucrose, lactose, gelatin, etc. in the composition. Is prepared. Also, lubricants such as magnesium stearate and talc are used in addition to simple excipients. Liquid preparations for oral administration include suspensions, intravenous solutions, emulsions, syrups, etc. In addition to water and liquid paraffin, which are commonly used as diluents, various excipients, such as wetting agents, sweeteners, fragrances, and preservatives, can be included. have. Formulations for parenteral administration include sterile aqueous solutions, non-aqueous solvents, suspensions, emulsions, lyophilized preparations, and suppositories. Non-aqueous solvents and suspensions may include propylene glycol, polyethylene glycol, vegetable oils such as olive oil, and injectable esters such as ethyl oleate. As a base for suppositories, Witepsol, Macrogol, Tween 61, cacao butter, laurin butter, and glycerogelatin may be used.
본 발명의 조성물의 바람직한 투여량은 개체의 상태 및 체중, 질병의 정도, 약물형태, 투여경로 및 기간에 따라 다르지만, 당업자에 의해 적절하게 선택될 수 있다. 예를 들어, 바람직한 효과를 위해서, 본 발명의 조성물은 1일 0.0001 내지 1,000 mg/kg(체중)의 양으로 투여할 수 있다. 상기 조성물의 투여는 하루에 한번 투여할 수도 있고, 수 회 나누어 투여할 수도 있다.The preferred dosage of the composition of the present invention depends on the condition and weight of the individual, the severity of the disease, the drug form, the route and duration of administration, but can be appropriately selected by those skilled in the art. For example, for the desired effect, the composition of the present invention may be administered in an amount of 0.0001 to 1,000 mg/kg (body weight) per day. The composition may be administered once a day or divided several times.
본 발명의 조성물은 개체에게 다양한 경로로 투여될 수 있다. 투여의 모든 방식은 예상될 수 있다.The composition of the present invention can be administered to a subject by various routes. Any mode of administration can be expected.
본 발명의 또 다른 일 예는, 본 발명의 백신 조성물을 돼지에 투여하는 단계를 포함하는, 돼지 생식기 호흡기 증후군을 예방 또는 치료하는 방법을 제공할 수 있다.Another example of the present invention can provide a method for preventing or treating porcine genital respiratory syndrome, comprising administering a vaccine composition of the present invention to a pig.
본 발명의 키메라 바이러스 지놈을 포함하는 백신 조성물을 돼지에 투여함으로써 PRRSV 항원에 대한 돼지의 면역 반응이 증강되도록 유도할 수 있으며, PRRSV 항원에 대한 돼지의 면역 반응이 증강되도록 유도해, 돼지 생식기 호흡기 증후군을 예방 또는 치료하는 방법을 제공할 수 있다. 바람직하게는 예방할 수 있다.By administering the vaccine composition comprising the chimeric virus genome of the present invention to pigs, it is possible to induce that the pig's immune response to the PRRSV antigen is enhanced, and to induce the pig's immune response to the PRRSV antigen to be enhanced, porcine genital respiratory syndrome It can provide a way to prevent or treat. Preferably it can be prevented.
구체적으로, 상기 방법은 조성물을 피하 주사, 정맥내 주사, 진피내 주사, 비경구 주사, 근육내 주사, 무침(needle free) 주사, 전기천공, 경구 전달, 비내 전달, 구비강(oronasal) 전달, 또는 그의 임의의 조합에 의해 투여할 수 있다.Specifically, the method includes subcutaneous injection, intravenous injection, intradermal injection, parenteral injection, intramuscular injection, needle free injection, electroporation, oral delivery, intranasal delivery, oronasal delivery, Or any combination thereof.
본 발명은 전술한 임의의 방법을 수행하기 위한 키트(kit)를 제공할 수 있다. 이 키트는 용기, 바람직하게는 본 발명의 약독화된 PRRS 키메라 바이러스를 함유하는 백신 조성물, 약제학적으로 허용되는 담체, 보강제 및 PRRS 감염의 임상 징후 또는 효과, 바람직하게는 PRRS의 빈도 또는 중증도를 경감시키도록 이를 필요로 하는 동물에게 상기 면역원성 조성물을 투여하기 위한 사용설명서를 포함할 수 있다. 키트는 또한 주사 수단 및/또는 다른 형태의 투여 수단을 포함할 수 있다. 또한, 키트는 용매를 포함할 수 있다. 약독화된 백신은 동결건조될 수 있고, 용매로 복원되어 주사 및/또는 흡입용 용액이 될 수 있다. 용매는 물, 생리식염수, 완충액 또는 보강 용매일 수 있다. 키트는 약독화된 바이러스, 용매 및/또는 약제학적으로 허용되는 담체를 함유하는 분리 용기를 포함할 수 있다. 사용설명서는 하나 이상의 용기에 부착된 라벨 및/또는 인쇄물일 수 있다.The present invention can provide a kit for performing any of the methods described above. The kit reduces the clinical signs or effects of the container, preferably a vaccine composition containing the attenuated PRRS chimeric virus of the invention, a pharmaceutically acceptable carrier, adjuvant and PRRS infection, preferably PRRS frequency or severity Instructions for administering the immunogenic composition to an animal in need thereof may be included. The kit can also include injection means and/or other forms of administration. Also, the kit may include a solvent. The attenuated vaccine can be lyophilized and restored to a solvent to be a solution for injection and/or inhalation. The solvent can be water, physiological saline, buffer or reinforcing solvent. The kit can include a separation container containing the attenuated virus, solvent and/or pharmaceutically acceptable carrier. The instructions for use may be labels and/or printed materials attached to one or more containers.
본 발명에 따른 PRRSV 바이러스 키메라 바이러스는 돼지에 접종시 중화항체의분비량을 현저히 증가시킴으로써 PRRS 를 효과적으로 방어하는데 이용할 수 있으며, PRRS 치료용 백신으로 유용하게 사용할 수 있다.The PRRSV virus chimeric virus according to the present invention can be used to effectively defend PRRS by significantly increasing the secretion of neutralizing antibodies when inoculated into pigs, and can be usefully used as a vaccine for the treatment of PRRS.
도 1은 PRRS 바이러스의 일반적인 지놈 배열(genomic arrangement)을 나타낸다.1 shows a general genomic arrangement of PRRS virus.
도 2는 LMY ver2 바이러스와 BP2017-2 바이러스의 클론의 일부를 각각 절단하고 연결하여 합성한 LMY+BP2017 키메라 바이러스의 지놈 배열을 나타낸 모식도이다.Figure 2 is a schematic diagram showing the genome sequence of the LMY + BP2017 chimeric virus synthesized by cutting and connecting a part of clones of the LMY ver2 virus and the BP2017-2 virus, respectively.
도 3은 PRRSV LMY ver2 바이러스와 LMY+BP2017 키메라 바이러스의 계통수(Phylogenetic tree)를 나타낸다.Figure 3 shows the phylogenetic tree of the PRRSV LMY ver2 virus and the LMY+BP2017 chimera virus.
도 4는 PRRSV LMY ver2 바이러스와 LMY+BP2017 키메라 바이러스의 돼지폐포대식세포(Porcine Alveolar Macrophage cell; PAM cell) 에서의 증식성 차이를 나타낸다.FIG. 4 shows the proliferative difference between PRRSV LMY ver2 virus and LMY+BP2017 chimeric virus in Porcine Alveolar Macrophage cells (PAM cells).
도 5는 돼지에 PRRSV LMY, LMY+BP2017 키메라 바이러스, PBS 접종 후 중화항체 분비 차이를 비교한 것이다.Figure 5 is a PRRSV LMY, LMY+BP2017 chimera virus in pigs, comparing the secretion of neutralizing antibodies after PBS inoculation.
이하, 본 발명을 실시예에 의해 상세히 설명한다. 단, 하기 실시예는 본 발명을 예시하는 것일 뿐, 본 발명이 하기 실시예에 의해 한정되는 것은 아니다.Hereinafter, the present invention will be described in detail by examples. However, the following examples are only to illustrate the present invention, the present invention is not limited by the following examples.
RNA는 쉽게 파괴되기 때문에 DNA로 바꾸어 모든 작업을 수행한 후에 이로부터 RNA를 합성하여 세포를 형질감염시켰다.Since RNA is easily destroyed, the cells were transfected by synthesizing RNA from the DNA after converting to DNA.
실시예 1: 키메라 바이러스의 제조Example 1: Preparation of chimeric virus
1-1. 키메라 바이러스의 디자인1-1. Chimera virus design
PRRS 키메라 바이러스는LMY 균주의 변이주의 비구조단백질(Non structural Protein 1, NSP1; 서열번호: 11) 부위 및 충남 공주시 남산리 남산농장에서 2017년에 분리된 BP2017-2의 ORF2, ORF3, ORF4, ORF5, ORF6, 및 ORF7 부위를 포함하도록 디자인하였다.PRRS chimera virus is a non-structural protein (NON structural Protein 1, NSP1; SEQ ID NO: 11) of the variant strain of LMY strain and ORF2, ORF3, ORF4, ORF5, ORF6 of BP2017-2 isolated in 2017 from Namsan Farm, Namsan-ri, Gongju-si, Chungnam , And ORF7 sites.
1-2. 약독화된 LMY 변이주 제조1-2. Manufacturing attenuated LMY mutants
기존 검역본부에서 분리한 PRRS 균주인, LMY 균주(GenBank accession no.DQ473474.1.)를 사용해 NSP1 부위의 유전자의 염기서열 중 91개의 염기를 치환하여 LMY ver2변이주를 제조하였다. 상기 NSP1 부위의 유전자는 NSP1-alpha 부위에서 25개 염기가, NSP1-beta 부위에서 66개 염기가 치환되었다.An LMY ver2 mutant was prepared by substituting 91 bases of the nucleotide sequence of the gene at the NSP1 site using the PRRS strain, LMY strain (GenBank accession no.DQ473474.1.), isolated from the existing quarantine headquarters. The NSP1 site gene was replaced with 25 bases at the NSP1-alpha site and 66 bases at the NSP1-beta site.
구체적으로, 상기 재조합 균주 LMY ver2는 일반적으로 알려진 SAVE(Synthetic Attenuated Virus Engineering) 프로그램 또는, 본 발명자들이 개발한 SAVE(Synthetic Attenuated Virus Engineering) 프로그램을 이용하여 Codon Pair Deoptimization 원리(표 3)에 따라 염기서열의 일부를 침묵 돌연변이(silent mutation) 시켜 제조하였다. 우선, SAVE 프로그램을 사용해 LMY 바이러스의 유전자 코돈이 쌍으로 배열시 상호작용하여 생기는 편향성인 CPB(codon pair base)값을 컴퓨터 알고리즘을 이용해 수치화하였다. CPB 수치는 LMY 바이러스 유전자의 일부 염기서열이 다른 염기서열로 치환될 시 변동되며, 바이러스의 증식성과 밀접한 관련이 있다. 바이러스의 증식성은 염기서열 치환을 통해 CPB 수치가 감소(deoptimization)되면, 증식성이 감소하고 약독화된다(Virus Attenuation by Genome-Scale Changes in Codon Pair Bias, Science, 2008, J. Robert Coleman et al.). 본 발명자들은 LNY 모균주의 genome에서 유전적으로 안정성이 높은 NSP1 부위(NSP1-alphe 및 NSP1-beta, 서열번호 11)를 선정하여 SAVE 프로그램으로 분석하였으며, CPB값이 비교적 높게 나타난 염기 부위 중 NSP1-alpha 부위에서 25개, NSP1-beta 부위에서 66개, 총 91개의 염기를 선택해 다른 염기로 치환하여 Deoptimization 시켜 LMY 바이러스 변이주를 제조하였다. 상기 방법으로 제조된 NSP1의 91개 염기서열이 돌연변이(서열번호 12)된 LMY 바이러스 변이주를 LMY ver2로 지칭하였으며, 염기서열을 아래 표 3에 나타냈다. 상기 LMY ver2는 수탁번호 13394BP를 갖는다.Specifically, the recombinant strain LMY ver2 is a base sequence according to the Codon Pair Deoptimization Principle (Table 3) using a generally known Synthetic Attenuated Virus Engineering (SAVE) program or SAVE (Synthetic Attenuated Virus Engineering) program developed by the present inventors. A portion of the was prepared by silent mutation (silent mutation). First, using the SAVE program, the codon pair base (CPB) value, which is a bias caused by the interaction of the gene codons of the LMY virus in pairs, was quantified using a computer algorithm. CPB levels fluctuate when some nucleotide sequences of the LMY virus gene are replaced with other nucleotide sequences, and are closely related to the proliferation of the virus. Viral Attenuation by Genome-Scale Changes in Codon Pair Bias, Science, 2008, J. Robert Coleman et al. ). The present inventors selected NSP1 regions (NSP1-alphe and NSP1-beta, SEQ ID NO: 11) with high genetic stability in the genome of the LNY parent strain and analyzed them with the SAVE program, and NSP1-alpha among base regions with relatively high CPB values LMY virus mutants were prepared by deoptimization by selecting 25 bases at the site, 66 bases at the NSP1-beta site, and 91 bases, replacing them with other bases. The LMY virus mutant strain in which 91 base sequences of the NSP1 prepared by the above method were mutated (SEQ ID NO: 12) was referred to as LMY ver2, and the base sequences are shown in Table 3 below. The LMY ver2 has accession number 13394BP.
Figure PCTKR2019017319-appb-T000003
Figure PCTKR2019017319-appb-T000003
Figure PCTKR2019017319-appb-I000018
Figure PCTKR2019017319-appb-I000018
Figure PCTKR2019017319-appb-I000019
Figure PCTKR2019017319-appb-I000019
(상기 표 3에서, LMY ver2 NSP1 유전자의 핵산 서열 중 굵은 글씨와 밑줄로 표시한 부분은 LMY NSP1 유전자 또는 LMY NSP1-beta 유전자에서 변이가 일어난 염기부분이다.)(In Table 3, the bolded and underlined portion of the nucleic acid sequence of the LMY ver2 NSP1 gene is the base portion where the mutation occurred in the LMY NSP1 gene or LMY NSP1-beta gene.)
다음으로, LMY ver2 변이주의 약독화정도를 확인하기 위해, CPB 값을 측정하였다. LMY 모균주의 NSP1 CPB 값은 약 0.0139, NSP1-beta CBP 값은 약 0.016 정도로 측정되었으나, 본 발명의 LMY ver2 변이주의 CPB 값은 약 NSP1에서 -0.2393, NSP1-beta에서 약 -0.33 정도로 측정되었다. 이로부터 본 발명의 LMY ver2 변이주의 증식성이 기존 모균주보다 감소되어 있고, 약독화된 균주임을 알 수 있었다.Next, to confirm the degree of attenuation of the LMY ver2 mutant strain, CPB values were measured. The NSP1 CPB value of the LMY parent strain was measured to be about 0.0139 and the NSP1-beta CBP value to about 0.016, but the CPB value of the LMY ver2 variant strain of the present invention was measured to be about -0.2393 to NSP1 and about -0.33 to NSP1-beta. From this, it was found that the proliferative potential of the LMY ver2 mutant strain of the present invention is reduced compared to the existing parent strain, and is an attenuated strain.
Figure PCTKR2019017319-appb-T000004
Figure PCTKR2019017319-appb-T000004
다음으로, LMY ver2의 감염성클론(infectious clone)을 제조하였다.Next, an infectious clone of LMY ver2 was prepared.
우선, LMY 균주의 전체 유전자 서열(GenBank accession no.DQ473474.1.)을 7개의 단편(Fragments)으로 나누어 각각 합성하였다. 상기 7개의 단편 중 단편 1이 NPS-1 부위이며, 상기 부위를 LMY 균주의 NSP1 부위의 유전자 염기서열 중 91개 염기가 치환된 DNA 단편(서열번호 12)으로 합성하였다. 합성된 단편 유전자는 순서대로 하기 표 5의 제한효소로 자른 뒤 ligase로 연결하여 하나의 감염성 클론(infectious clone)을 제조하였다.First, the entire gene sequence (GenBank accession no.DQ473474.1.) of the LMY strain was divided into 7 fragments and synthesized. Fragment 1 of the 7 fragments was an NPS-1 site, and the site was synthesized as a DNA fragment (SEQ ID NO: 12) in which 91 bases among the gene base sequences of the NSP1 site of the LMY strain were substituted. The synthesized fragment gene was cut with restriction enzymes in Table 5 in order, and then linked with ligase to prepare one infectious clone.
Figure PCTKR2019017319-appb-T000005
Figure PCTKR2019017319-appb-T000005
1-3. 키메라 바이러스 클론의 제작1-3. Construction of chimeric virus clones
도 1의 모식도와 같이, PRRS 바이러스는 총 8개의 ORF, 즉 ORF1a, ORF1b, 및 ORF2 내지 7을 포함하고 있다.As shown in the schematic diagram of Fig. 1, the PRRS virus contains a total of 8 ORFs, namely ORF1a, ORF1b, and ORF2 to 7.
앞선 실시예 1-1에서 증폭한 LMY ver2 변이주의 전체 구조 유전자를 포함하는 지놈영역에서 ORF2 내지 ORF7의 부위를 제한효소인 AscI 및 PacI를 사용하여 절단하였다. 이어서, BP2017 균주의 지놈영역 중 LMY ver2 변이주의 ORF2 내지 ORF7의 부위에 대응하는 부분을 동일한 AscI 및 PacI 제한효소로 자른 후, 상기 LMY ver2 변이주의 ORF1a 및 ORF1b 영역과 BP2017 균주의 ORF2 내지 ORF7 영역에 해당하는 부위를 ligase로 연결하여 하나의 재조합 감염성 클론(infectious clone)을 제조하였으며, LMY+BP2017로 명명하였다. 사용한 제한효소를 아래 표 6에 나타냈다.In the genome region containing the entire structural gene of the LMY ver2 mutant amplified in Example 1-1, the regions of ORF2 to ORF7 were cleaved using restriction enzymes AscI and PacI. Subsequently, among the genomic regions of the BP2017 strain, the portions corresponding to the regions of ORF2 to ORF7 of the LMY ver2 mutant were cut with the same AscI and PacI restriction enzymes, and then to the ORF1a and ORF1b regions of the LMY ver2 mutant and the ORF2 to ORF7 regions of the BP2017 strain. One recombinant infectious clone was prepared by linking the corresponding site with a ligase, which was named LMY+BP2017. The restriction enzymes used are shown in Table 6 below.
Figure PCTKR2019017319-appb-T000006
Figure PCTKR2019017319-appb-T000006
상기 완성된 감염성 클론을 CMV 프로모터 및 앰피실린(ampicillin) 저항성 유전자를 탑재한 high copy vector에 삽입한 후, lipofectamine을 이용해 BHK cell(한국세포주은행)에 형질감염 하고, 최종적으로 본 발명의 LMY+BP2017 키메라 바이러스를 작출하였다.After inserting the completed infectious clone into a high copy vector loaded with CMV promoter and ampicillin resistance gene, transfected into BHK cells (Korea Cell Line Bank) using lipofectamine, and finally LMY+BP2017 of the present invention. The chimeric virus was generated.
상기 LMY+BP2017 키메라 바이러스는 2018년 10월 24일자로 한국생명공학연구원 생물자원센터에 기탁하여 수탁번호 KCTC13675BP를 수여받았다.The LMY+BP2017 chimera virus was deposited with the Korea Research Institute of Bioscience and Biotechnology Biological Resource Center on October 24, 2018, and received the accession number KCTC13675BP.
실시예 2. LMY+BP2017 키메라 바이러스의 CpG 및 UpA 수치 측정Example 2 Measurement of CpG and UpA levels of LMY+BP2017 chimeric virus
실시예 1에서 제조한 LMY+BP2017 키메라 바이러스의 증식성을 평가하기 위해, LMY+BP2017 키메라 바이러스의 NSP1 유전자 내 CpG, UpA의 비율과 모균주인 LMY의 NSP1 beta 유전자 내 CpG 및 UpA 수치를 측정하였다.To evaluate the proliferation of the LMY+BP2017 chimera virus prepared in Example 1, the ratio of CpG and UpA in the NSP1 gene of the LMY+BP2017 chimera virus and the CpG and UpA values in the NSP1 beta gene of the parent strain LMY were measured. .
바이러스 유전자의 CpG, UpA 비율의 변화는 deoptimization 과정에서 필연적으로 발생하는 결과로, 유전자의 CpG, UpA의 수치가 증가되면, cell stress를 유발하여 바이러스의 증식성이 감소된다. LMY+BP2017 키메라 바이러스와 LMY 바이러스의 NSP1 beta 유전자 내 CpG, UpA의 비율을 SSE program (version 1.2)을 이용하여 측정하였으며, 그 결과를 아래 표 7에 나타냈다.Changes in the ratio of CpG and UpA of the viral gene inevitably occur during the deoptimization process. When the levels of CpG and UpA of the gene increase, cell stress is induced and the virus's proliferation is reduced. The ratio of CpG and UpA in NSP1 beta gene of LMY+BP2017 chimeric virus and LMY virus was measured using SSE program (version 1.2), and the results are shown in Table 7 below.
Figure PCTKR2019017319-appb-T000007
Figure PCTKR2019017319-appb-T000007
표 7에 나타난 바와 같이, LMY+BP2017 키메라 바이러스의 CpG 및 UpA의 수치가 모균주 LMY와 대비해 상승함을 확인하였으며, 이로부터 LMY+BP2017 키메라 바이러스의 증식성이 LMY 모균주와 비교해 현저히 감소됨을 확인할 수 있었다.As shown in Table 7, it was confirmed that the levels of CpG and UpA of the LMY+BP2017 chimera virus increased compared to the parent strain LMY, from which it was confirmed that the proliferation of the LMY+BP2017 chimera virus was significantly reduced compared to the LMY parent strain. Could.
실시예 3. LMY+BP2017 키메라 균주의 동정Example 3. Identification of LMY+BP2017 chimeric strain
3-1. LMY+BP2017 키메라 균주의 동정3-1. Identification of LMY+BP2017 chimeric strain
실시예 1에서 합성한 LMY+BP2017 키메라 균주와 LMY균주(GenBank accession no.DQ473474.1.)의 NSP1 부위를 sequencing 하여 LMY+BP2017 키메라 균주를 동정하였다.The LMY+BP2017 chimeric strain was identified by sequencing the LMY+BP2017 chimeric strain synthesized in Example 1 and the NSP1 region of the LMY strain (GenBank accession no.DQ473474.1.).
구체적으로 LMY 바이러스의 NSP1 부위를 포함해 1~1654nt까지 탐지 가능한 표 8의 프라이머 세트와 one step RT PCR 키트(Intron)를 이용해 PCR을 수행하였으며, 구체적으로, 45℃에서 30분, 95℃에서 5분간 initial RT 과정을 거친 후 94℃에서 30초, 61℃에서 30초 72℃에서 2분 동안 반응시켰으며, 이 과정을 38회 반복하였다. 다음으로 PCR결과 증폭산물을 sequencing 하여 각각 균주의 동정을 완료하였다.Specifically, PCR was performed using the primer set of Table 8 and one step RT PCR kit (Intron) that can be detected from 1 to 1654nt, including the NSP1 region of the LMY virus, specifically, at 45°C for 30 minutes and at 95°C 5 After the initial RT process for a minute, the reaction was carried out for 2 minutes at 94°C for 30 seconds and 61°C for 30 seconds at 72°C, and the process was repeated 38 times. Next, sequencing of the amplification products by PCR results was completed to identify each strain.
Figure PCTKR2019017319-appb-T000008
Figure PCTKR2019017319-appb-T000008
3-2. 타 균주와의 상동성 비교 및 계통수3-2. Comparison of homology with other strains and phylogenetic tree
실시예 1에서 재조한 본 발명의 재조합 바이러스 균주 LMY ver2와 알려진 PRRS 바이러스 균주와의 유전적 차이를 확인하기 위해, bioedit program을 사용하여 각 균주의 NSP1 부위 sequence identity 측정하였으며, 상동성 비교 결과를 표 9에 나타냈다.To confirm the genetic difference between the recombinant virus strain LMY ver2 of the present invention prepared in Example 1 and a known PRRS virus strain, the sequence identity of NSP1 regions of each strain was measured using a bioedit program, and the comparison results of homology are shown in the table. It is shown in 9.
Figure PCTKR2019017319-appb-T000009
Figure PCTKR2019017319-appb-T000009
표 9에 나타난 바와 같이, 상동성 비교 결과 LMY+BP chimera바이러스가 여타의 PRRS 균주와는 다른 고유한 서열을 보유하고 있음을 알 수 있었다.As shown in Table 9, the homology comparison result showed that the LMY+BP chimera virus possesses a unique sequence different from other PRRS strains.
상동성 비교 결과를 바탕으로, bioedit program을 사용하여 계통수를 분석하였으며 Bootstrap을 1000회 반복하였다. 이를 바탕으로 대략적인 LMY+BP2017 키메라 바이러스와 LMY의 계통수(Phylogenetic tree) 를 작성하였으며, 이를 도 3에 나타냈다. 도 3의 계통수로부터, 본 바이러스의 계통을 알 수 있었다.Based on the homology comparison result, phylogenetic tree was analyzed using bioedit program and Bootstrap was repeated 1000 times. Based on this, approximate LMY+BP2017 chimera virus and LMY phylogenetic tree were prepared and are shown in FIG. 3. From the phylogenetic tree of Fig. 3, the strain of the present virus was found.
3-3. 세포 계대 연구3-3. Cell passage research
실시예 1에서 제작한 LMY+BP2017 키메라 바이러스를 계대했을 때 변형된 부위가 언제까지 유지되는지를 확인하였다. PRRS 바이러스 수용성 세포주로 알려진 MARC-145 세포에서 본 발명의 LMY+BP2017 키메라 바이러스를 30회 계대 과정을 거쳐 안정화시켰으며, 10계대 마다 유전자 변이를 확인하기 위해 상기 실시예 3-1과 동일한 방법을 사용해 Sequencing 작업을 진행하였다.When the LMY+BP2017 chimera virus prepared in Example 1 was passaged, it was confirmed how long the modified site was maintained. In MARC-145 cells known as PRRS virus soluble cell line, the LMY+BP2017 chimera virus of the present invention was stabilized after 30 passages, and the same method as in Example 3-1 was used to confirm gene mutation every 10 passages. Sequencing was performed.
Sequencing 확인결과, 30계대 안정화 이후에도 본 바이러스의 유전자 치환부위가 유지됨을 확인하였다. 하기 표 10에 각 계대수에 따른 염기 변이의 수 (nt change), 변이 위치 (mutataion site), 및 아미노산 변이 여부 (a.a change)를 나타내었다.As a result of sequencing, it was confirmed that the gene replacement site of the virus was maintained even after the 30th passage stabilization. Table 10 shows the number of nucleotide changes (nt change), mutation site (mutataion site), and amino acid mutation (a.a change) according to each passage number.
Figure PCTKR2019017319-appb-T000010
Figure PCTKR2019017319-appb-T000010
상기 표 10에서 확인할 수 있는 바와 같이, 30회 이상 계대를 진행한 경우에도 ORF1a의 NSP1a 또는 NSP1b 유전자 상의 변이는 그대로 유지하였으며, NSP2 단백질 또는 ORF2a에서의 변이만이 확인되었다. 따라서 40회 계대가 이루어진 후에도 실시예 1에서 제작된 바이러스의 NSP1 단백질을 암호화하는 유전자의 변이가 유지됨을 확인하였다.As can be seen from Table 10, even when the passage was performed 30 times or more, the mutation on the NSP1a or NSP1b gene of ORF1a was maintained, and only the mutation on the NSP2 protein or ORF2a was confirmed. Therefore, it was confirmed that even after the passage 40 times, the variation of the gene encoding the NSP1 protein of the virus produced in Example 1 was maintained.
실시예 4: LMY와 LMY+BP chimera의 증식성 비교Example 4: Comparison of proliferative properties of LMY and LMY+BP chimera
실시예 1에서 제조한 LMY+BP2017 키메라 바이러스의 증식성을 확인하기 위해, 돼지 폐 대식세포(PAM, Porcine Alveolar Macrophage)에서 LMY+BP2017 키메라 바이러스와 이의 모균주인 LMY를 접종한 이후, 작출되는 바이러스의 양을 TCID50으로 측정하여 확인하였다.In order to confirm the proliferation of the LMY+BP2017 chimera virus prepared in Example 1, swine lung macrophages (PAM, Porcine Alveolar Macrophage) inoculated with the LMY+BP2017 chimera virus and its parent strain, LMY, and then the virus produced It was confirmed by measuring the amount of TCID 50 .
구체적으로, RPMI 배지(10% FBS, 1% penicillin, streptomycin 포함) 2ml 가포함된 6 웰 플레이트에 PAM 세포를 웰당 2 X 106 cell/well의 비율로 분주하였다. 다음으로, LMY와 LMY+BP2017 키메라 바이러스를 각각 서로 다른 웰에 MOI 0.01의 비율로 접종하고 접종 1시간 후에 모든 상층액을 제거하였으며, 유지액 RPMI 배지(10% FBS, 1% penicillin, streptomycin 포함)를 2ml 분주하였다. 분주하고 2일이 지난 후, 각각의 웰의 상층액을 수거하여 TCID50(Tissue culture infective dose50)을 측정하였다. 이후 실험에서 사용되는 세포는 TCID50 측정 전날에 미리 96웰에 MARC-145 세포 2X105 cell/well을 DMEM 배지(10%(v/v) FBS, 1%(w/v) penicillin, streptomycin) 100ul와 함께 분주하여 부착시킨 것을 사용하였다.Specifically, PAM cells were dispensed at a rate of 2 X 10 6 cells/well per 6 well plates containing 2 ml of RPMI medium (including 10% FBS, 1% penicillin, and streptomycin). Next, LMY and LMY+BP2017 chimera viruses were inoculated into different wells at a rate of 0.01 of MOI, and after 1 hour of inoculation, all the supernatant was removed, and maintenance fluid RPMI medium (including 10% FBS, 1% penicillin, streptomycin) 2 ml was dispensed. Two days after dispensing, the supernatant of each well was collected to measure TCID 50 (Tissue culture infective dose 50 ). The cells used in the subsequent experiments were prepared by adding 2X10 5 cell/well of MARC-145 cells to 96 wells on the day before the measurement of TCID 50 in DMEM medium (10% (v/v) FBS, 1% (w/v) penicillin, streptomycin) 100ul. It was used by dispensing with.
접종할 바이러스는 다음과 같이 준비하였다. 앞서 수거한 상층액을 200uL씩 96 웰 플레이트의 맨 왼쪽 웰에 일렬로 분주하였으며, 나머지 웰에는 DMEM 배지(FBS, 항생제 무첨가)를 180㎕씩 분주하였다. 다음으로, 왼쪽에서부터 차례로 multi-pipet을 사용해 20㎕씩 채취하고 오른쪽 웰에 분주하면서 10진 희석하였다. Tip을 바꾸며 차례로 희석하고 마지막 12번째 웰은 음성 대조군으로 유지하였다. 준비된 바이러스 희석액을 MARC-145 cell이 부착된 plate에 접종하였다. 이때, MARC-145 cell의 배양액은 모두 제거하고 PBS 200㎕를 각 웰에 분주하고 버리기를 3회 반복하여 washing 과정을 수행하였다. 이후 준비된 바이러스 희석액을 웰당 100㎕씩 분주하여 접종하였으며, 접종 2시간 이후 접종액을 모두 제거하고 새로운 유지액(DMEM 배지, 10% FBS, 1% penicillin, streptomycin)을 100㎕ 분주하였다.Viruses to be inoculated were prepared as follows. The supernatant collected above was dispensed in a row in 200uL to the leftmost well of a 96-well plate, and DMEM medium (FBS, no antibiotic added) was dispensed in 180µl to the remaining wells. Next, 20 μl was collected using a multi-pipet one after the other from the left and diluted 10-fold while dispensing into the right well. The tips were diluted one after the other and the last 12th well was maintained as a negative control. The prepared virus dilution was inoculated on a plate to which MARC-145 cells were attached. At this time, all of the culture solution of the MARC-145 cell was removed, and 200 µl of PBS was dispensed into each well and discarded 3 times to perform a washing process. Thereafter, the prepared virus dilution was inoculated by dispensing 100 μl per well, and after 2 hours of inoculation, all of the inoculum was removed and 100 μl of fresh maintenance solution (DMEM medium, 10% FBS, 1% penicillin, streptomycin) was dispensed.
분주 후, 약 7일간 세포에서 CPE(Cytopathogenic effect)의 일종인 Clumping과 apoptosis의 발생여부를 확인하였으며, 최종적으로 CPE가 보이지 않은 웰의 바로 이전 희석배수를 기준으로 8개 바이러스 접종액 중 절반인 4개 웰이 CPE를 보일 수 있는 희석배수를 구하였다. 1ml를 기준으로 10을 곱해 최종 수치를 계산하였다.After dispensing, it was confirmed whether Clumping and apoptosis, a type of cytopathogenic effect (CPE), occurred in the cells for about 7 days, and finally, 4 of the 8 virus inoculation solutions were based on the dilution factor immediately before the well without CPE. Dilution multiples in which dog wells can show CPE were determined. The final value was calculated by multiplying 10 by 1 ml.
LMY+BP2017 키메라 균주와 모균주 LMY 균주를 돼지 폐 대식세포(PAM cell)에 접종하고 1일 내지 2일이 지난 후 측정한 TCID50 값을 하기 표 11 및 도 4에 나타냈다.The LMY+BP2017 chimeric strain and the parent strain LMY strain were inoculated into porcine lung macrophages (PAM cells) and the TCID 50 values measured after 1 to 2 days are shown in Tables 11 and 4 below.
Figure PCTKR2019017319-appb-T000011
Figure PCTKR2019017319-appb-T000011
표 11 및 도 4에서 알 수 있는 바와 같이, 균주를 접종하고 바이러스가 본격적으로 작출되기 시작하는 2일에 측정한 TCID50의 값이 LMY+BP2017 키메라가 LMY 보다 100배 낮은 TCID50 값을 나타냈다. 이로부터 PRRS의 주요 감염 세포인 PAM(Porcine Alveolar Macrophage) cell에서 본 발명의 LMY+BP2017 키메라 바이러스는 증식성이 LMY에 비해 최소 10배 이상 감소함을 알 수 있었으며, 본 발명의 LMY+BP2017 키메라 바이러스가 모균주 LMY 보다 증식성이 감소되어 약독화 되어있음을 확인할 수 있었다.As can be seen from Table 11 and Figure 4, the value of TCID 50 measured on the 2nd day when the strain was inoculated and the virus began to be harvested was LMY+BP2017 chimera, showing a TCID 50 value 100 times lower than LMY. From this, it was found that the LMY+BP2017 chimera virus of the present invention in PAM (Porcine Alveolar Macrophage) cell, which is the main infecting cell of PRRS, has at least 10-fold reduction in proliferative properties compared to LMY, and the LMY+BP2017 chimera virus of the present invention. It was confirmed that the proliferation was reduced and attenuated more than the parent strain LMY.
실시예 4: 중화항체 분비 양상 확인Example 4: Neutralizing antibody secretion pattern confirmation
본 발명의 키메라 바이러스를 접종한 이후, 중화항체 분비 양상을 확인하기 위하여, 3주령 돼지 12두를 4마리씩 3개의 그룹으로 나누어 각각 LMY(105 TCID50), LMY+BP2017 키메라 바이러스 (105 TCID50), PBS 를 2ml씩 접종하였다. 4주 후 각 그룹의 돼지의 정맥에서 혈액을 채혈하여 혈청을 2ml 분리하였으며, 혈청 내 중화항체의 양을 측정하였다.After inoculation with the chimeric virus of the present invention, in order to confirm the secretion pattern of neutralizing antibodies, 12 pigs, 3 weeks old, were divided into 3 groups of 4 animals, each of which were LMY (10 5 TCID 50 ), LMY+BP2017 chimeric virus (10 5 TCID) 50 ), 2 ml of PBS was inoculated. After 4 weeks, blood was drawn from the veins of each group of pigs to separate 2 ml of serum, and the amount of neutralizing antibody in the serum was measured.
구체적으로 검사방법은 기존에 알려진 방법에 준하여 실시하였다. 모든 혈청 sample을 검사 시작 전에 45분 동안 56℃에서 heat inactivation시켰다. Inactivation되어 있는 혈청을 RPMI 1640 배지(10% FCS, 20mM L-glutamine, antibiotic-antimycotic mixture-100IU/ml penicillin, 100μg/ml streptomycin, 50μg/ml gentamycin, 0.25 mg/ml amphotericin B)에 넣고 2배씩 차례로 희석시켰다. 이어서 각각의 희석된 혈청을 100㎕씩 채취해, 미리 준비된 VR2332균주 200 TCID50/ml 100μl와 섞어 37℃에서 한 시간 동안 인큐베이션 시킨 후, 전날 미리 배양해 둔 monolayer 상태의 Marc-145 세포를 접종하였다. 이어서 37℃에서 한 시간 배앙한 후의 모든 접종액은 제거하였으며, 이를 RPMI 배양액 200㎕로 대체하였다. 이 후, 37℃에서 배양하면서 매일 cytopathic effect(CPE)를 확인하였으며, 5일 간 배양한 후 각 웰의 CPE를 확인하였다. CPE가 없는 well은 SDOW 17 항체를 이용한 염색을 통해 바이러스의 성장을 확인하였다. 중화항체 역가(titer)는 바이러스의 성장의 징후가 전혀 없는 가장 높은 희석배수의 역수를 산출해 측정하였으며, 측정결과를 아래 표 11 및 도 5에 나타냈다.Specifically, the inspection method was conducted in accordance with a known method. All serum samples were heat inactivated at 56°C for 45 minutes before starting the test. Inactivated serum was placed in RPMI 1640 medium (10% FCS, 20mM L-glutamine, antibiotic-antimycotic mixture-100IU/ml penicillin, 100μg/ml streptomycin, 50μg/ml gentamycin, 0.25 mg/ml amphotericin B) and doubled in sequence. Diluted. Subsequently, 100 μl of each diluted serum was collected, mixed with 100 μl of the previously prepared VR2332 strain 200 TCID 50 /ml and incubated at 37° C. for one hour, and then inoculated with the monolayer Marc-145 cells previously cultured the previous day. . Subsequently, after incubation at 37° C. for 1 hour, all inoculum was removed, and this was replaced with 200 μl of RPMI culture. Thereafter, the cytopathic effect (CPE) was confirmed daily while culturing at 37°C, and CPE of each well was confirmed after culturing for 5 days. In the well without CPE, virus growth was confirmed by staining with SDOW 17 antibody. The neutralizing antibody titer was measured by calculating the reciprocal of the highest dilution factor without any signs of virus growth, and the measurement results are shown in Tables 11 and 5 below.
Figure PCTKR2019017319-appb-T000012
Figure PCTKR2019017319-appb-T000012
표 11 및 도 5에 나타낸 바와 같이, LMY+BP2017 키메라 바이러스가 LMY 모균주에 비해 세포에서 유의적으로 높은 중화항체를 분비시킴을 확인할 수 있었다.As shown in Table 11 and FIG. 5, it was confirmed that the LMY+BP2017 chimeric virus secreted a significantly higher neutralizing antibody in cells compared to the LMY parent strain.
Figure PCTKR2019017319-appb-I000020
Figure PCTKR2019017319-appb-I000020
Figure PCTKR2019017319-appb-I000021
Figure PCTKR2019017319-appb-I000021
Figure PCTKR2019017319-appb-I000022
Figure PCTKR2019017319-appb-I000022

Claims (22)

  1. 구조식 1의 구조로 구성된 폴리뉴클레오타이드로서, 돼지 생식기 호흡기 증후군 바이러스(PRRSV)의 키메라 바이러스의 유전체인, 폴리뉴클레오타이드:A polynucleotide composed of the structure of Structural Formula 1, which is a genome of the chimeric virus of porcine genital respiratory syndrome virus (PRRSV), polynucleotide:
    [구조식 1][Structural Formula 1]
    Figure PCTKR2019017319-appb-I000023
    Figure PCTKR2019017319-appb-I000023
    상기 [X]는 수탁번호 KCTC 13394BP를 갖는 LMY ver2 변이주의 NSP1 유전자 ORF1a 및 ORF1b 부위의 유전자의 핵산 서열 또는 상기 핵산 서열과 70% 이상의 서열 상동성을 갖는 핵산 서열이며,The [X] is the nucleic acid sequence of the gene of the NSP1 gene ORF1a and ORF1b region of the LMY ver2 mutant with accession number KCTC 13394BP or a nucleic acid sequence having 70% or more sequence homology with the nucleic acid sequence
    상기 [Y]는 수탁번호 KCTC 13393BP를 갖는 BP2017-2 분리주의 ORF2 내지 ORF7 부위의 핵산 서열 또는 상기 핵산 서열과 70% 이상의 서열 성동성을 갖는 핵산 서열임.The [Y] is a nucleic acid sequence of the ORF2 to ORF7 region of the BP2017-2 isolate with accession number KCTC 13393BP or a nucleic acid sequence having 70% or more sequence homology with the nucleic acid sequence.
  2. 제1항에 있어서, 상기 구조식 1의 [Y]의 3'말단에 [A]n을 추가로 포함하고,According to claim 1, [A] n further includes a 3'end of [Y] of Structural Formula 1,
    상기 n은 염기 아데닌(Adenine, A)의 뉴클레오타이드의 개수로, 1 내지 100의 정수인, 폴리뉴클레오타이드.The n is the number of nucleotides of the base adenine (Adenine, A), an integer of 1 to 100, polynucleotide.
  3. 제1항에 있어서, 상기 PRRSV 키메라 바이러스의 폴리뉴클레오타이드는 DNA 또는 RNA인 것인, 폴리뉴클레오타이드.The polynucleotide of claim 1, wherein the polynucleotide of the PRRSV chimeric virus is DNA or RNA.
  4. 제1항에 있어서, 상기 [X]는 수탁번호 13394BP를 갖는 LMY ver2 변이주의 지놈을 제한효소 AscI 와 PacI 로 처리하여 얻어지는 유전자 단편인, 폴리뉴클레오타이드.The polynucleotide according to claim 1, wherein [X] is a gene fragment obtained by treating the genome of the LMY ver2 mutant with accession number 13394BP with restriction enzymes AscI and PacI.
  5. 제1항에 있어서, 상기 [Y]는 수탁번호 KCTC 13393BP를 갖는 BP2017-2 변이주의 지놈을 제한효소 AscI 와 PacI 로 처리하여 얻어지는 유전자 단편인, 폴리뉴클레오타이드.The polynucleotide according to claim 1, wherein [Y] is a gene fragment obtained by treating the genome of the BP2017-2 mutant strain having accession number KCTC 13393BP with restriction enzymes AscI and PacI.
  6. 제1항에 있어서, 상기 [X]는, 서열번호 11의 염기서열로 이루어지는 NSP1 유전자의 핵산 서열에서, 222번 위치, 225번 위치, 237번 위치, 240번 위치, 252번 위치, 306번 위치, 309번 위치, 312번 위치, 315번 위치, 324번 위치, 327번 위치, 330번 위치, 333번 위치, 336번 위치, 339번 위치, 342번 위치, 345번 위치, 357번 위치, 363번 위치, 366번 위치, 378번 위치, 379번 위치, 381번 위치, 393번 위치, 396번 위치, 543번 위치, 546번 위치, 549번 위치, 555번 위치, 558번 위치, 561번 위치, 573번 위치, 579번 위치, 582번 위치, 588번 위치, 612번 위치, 618번 위치, 621번 위치, 627번 위치, 633번 위치, 639번 위치, 654번 위치, 673번 위치, 675번 위치, 678번 위치, 681번 위치, 684번 위치, 705번 위치, 708번 위치, 729번 위치, 735번 위치, 738번 위치, 741번 위치, 744번 위치, 747번 위치, 771번 위치, 786번 위치, 789번 위치, 792번 위치, 810번 위치, 825번 위치, 828번 위치, 838번 위치, 840번 위치, 846번 위치, 849번 위치, 858번 위치, 867번 위치, 879번 위치, 882번 위치, 885번 위치, 891번 위치, 900번 위치, 903번 위치, 906번 위치, 924번 위치, 936번 위치, 939번 위치, 948번 위치, 954번 위치, 963번 위치, 966번 위치, 1026번 위치, 1029번 위치, 1038번 위치, 1047번 위치, 1053번 위치, 1066번 위치, 1068번 위치, 1086번 위치, 및 1110번 위치로 이루어지는 군에서 선택되는 하나 이상의 위치의 염기가 치환된 변이 NSP1 유전자를 포함하는 것인, 폴리뉴클레오타이드.According to claim 1, wherein [X] is, in the nucleic acid sequence of the NSP1 gene consisting of the nucleotide sequence of SEQ ID NO: 11, position 222, position 225, position 237, position 240, position 252, position 306 , Position 309, Position 312, Position 315, Position 324, Position 327, Position 330, Position 333, Position 336, Position 339, Position 342, Position 345, Position 357, 363 Position 3, Position 366, Position 378, Position 379, Position 381, Position 393, Position 396, Position 543, Position 546, Position 549, Position 555, Position 558, Position 561 , Position 573, Position 579, Position 582, Position 588, Position 612, Position 618, Position 621, Position 627, Position 633, Position 639, Position 654, Position 673, 675 Position #678, Position #678, Position #81, Position #684, Position #705, Position #708, Position #729, Position #735, Position #738, Position #731, #744, Position #747, Position #711 , Position 786, Position 789, Position 792, Position 810, Position 825, Position 828, Position 838, Position 840, Position 846, Position 849, Position 858, Position 867, 879 Position, 882 position, 885 position, 891 position, 900 position, 903 position, 906 position, 924 position, 936 position, 939 position, 948 position, 954 position, 963 position , One or more positions selected from the group consisting of position 966, position 1026, position 1029, position 1038, position 1047, position 1053, position 1066, position 1068, position 1086, and position 1110 A polynucleotide, wherein the base contains a substituted NSP1 gene.
  7. 제6항에 있어서, 상기 변이 NSP1 유전자는 서열번호 12의 핵산 서열 또는 이와 70% 이상의상동성을 갖는 핵산 서열로 표시되는 것인, 폴리뉴클레오타이드.The polynucleotide of claim 6, wherein the variant NSP1 gene is represented by a nucleic acid sequence of SEQ ID NO: 12 or a nucleic acid sequence having 70% or more homology to it.
  8. 제1항에 있어서, 상기 [Y]는 서열번호 2의 핵산 서열 또는 이와 70% 이상의상동성을 갖는 핵상 서열로 표시되는 것인, 폴리뉴클레오타이드.The polynucleotide according to claim 1, wherein [Y] is represented by a nucleic acid sequence of SEQ ID NO: 2 or a nuclear sequence having 70% or more homology thereto.
  9. 제1항에 있어서, 상기 상기 구조식 1은 서열번호 4의 핵산 서열 또는 이와 70% 이상의 상동성을 갖는 핵산 서열로 표시된는 것인, 폴리뉴클레오타이드.The polynucleotide according to claim 1, wherein the structural formula 1 is represented by a nucleic acid sequence of SEQ ID NO: 4 or a nucleic acid sequence having 70% or more homology thereto.
  10. 제1항 내지 제9항 중 어느 한 항의 폴리뉴클레오타이드를 지놈으로 포함하는 PRRSV 키메라 바이러스.A PRRSV chimeric virus comprising the polynucleotide of any one of claims 1 to 9 as a genome.
  11. 제10항에 있어서, 상기 키메라 바이러스는 수탁번호 KCTC13675BP를 갖는 것인, 바이러스.The virus according to claim 10, wherein the chimeric virus has accession number KCTC13675BP.
  12. 제10항의 PRRSV의 키메라 바이러스 또는 이의 계대 배양된 자손을 포함하는 돼지 생식기 호흡기 증후군 바이러스 백신 조성물.Porcine genital respiratory syndrome virus vaccine composition comprising the chimeric virus of PRRSV of claim 10 or a passaged cultured progeny thereof.
  13. 제12항에 있어서, 상기 키메라 바이러스는 수탁번호 KCTC13675BP를 갖는 것인, 백신 조성물.The vaccine composition of claim 12, wherein the chimeric virus has accession number KCTC13675BP.
  14. 제11항에 있어서, 상기 백신은 생백신인, 백신 조성물.The vaccine composition of claim 11, wherein the vaccine is a live vaccine.
  15. 제12항에 있어서, 상기 백신은 담체, 희석제, 부형제, 및 어주번트(adhuvant)로 이루어진 군에서 선택되는 1 이상을 더 포함하는 것인, 백신 조성물.The vaccine composition of claim 12, wherein the vaccine further comprises one or more selected from the group consisting of carriers, diluents, excipients, and adhuvants.
  16. 제12항에 있어서, 상기 백신 조성물과 이의 모균주(Accession No. GenBank accession no.DQ473474.1.)를 돼지의 폐 대식세포에 접종한 후, 측정한 상기 키메라 바이러스의 TCID50의 값이, 모균주의 TCID50 값에 비해 0.01 배 내지 0.1배의 TCID50 값을 갖는 것인, 백신 조성물.The method of claim 12, after inoculating the vaccine composition and its parent strain (Accession No. GenBank accession no.DQ473474.1.) into the lung macrophages of pigs, the value of the measured TCID 50 of the chimeric virus, Vaccine composition having a TCID 50 value of 0.01 to 0.1 times compared to the TCID 50 value of the strain.
  17. 제12항에 있어서, 상기 백신 조성물과 이의 모균주(Accession No. GenBank accession no.DQ473474.1.)를 돼지에 접종한 후, 측정한 상기 키메라 바이러스의 중화항체 값이, 모균주의 중화항체 값에 비해 2배 내지 8배인 것인, 백신 조성물.According to claim 12, After the vaccine composition and its parent strain (Accession No. GenBank accession no.DQ473474.1.) inoculated into pigs, the measured neutralizing antibody value of the chimeric virus, the neutralizing antibody value of the parent strain Compared to 2 to 8 times, the vaccine composition.
  18. 수탁번호 13394BP를 갖는 LMY ver2 변이주의 지놈을 제한효소 AscI 와 PacI 로 처리하여 폴리뉴클레오타이드 절편을 제조하는 단계;Preparing a polynucleotide fragment by treating the genome of the LMY ver2 mutant with accession number 13394BP with restriction enzymes AscI and PacI;
    수탁번호 KCTC 13393BP를 갖는 BP2017-2 변이주의 지놈을 제한효소 AscI 와 PacI 로 처리하여 폴리뉴클레오타이드 절편을 제조하는 단계; 및Preparing a polynucleotide fragment by treating the genome of the BP2017-2 variant having accession number KCTC 13393BP with restriction enzymes AscI and PacI; And
    상기 LMY ver 2의 폴리뉴클레오타이드 절편과 BP2017-2의 폴리뉴클레오타이드 절편을 재조합하여 감염성 클론(infectious clone)을 제조하는 단계를 포함하는, 돼지 생식기 호흡기 증후군 바이러스의 키메라 바이러스를 생산하는 방법.A method of producing a chimeric virus of porcine genital respiratory syndrome virus, comprising the step of preparing an infectious clone by recombining the polynucleotide fragment of LMY ver 2 and the polynucleotide fragment of BP2017-2.
  19. 제18항에 있어서, 상기 LMY ver2 변이주의 지놈을 제한효소 AscI 와 PacI 로 처리하여 제조된 폴리뉴클레오타이드 절편은 NSP1 단백질을 암호화하는 부위를 포함하는 것인, 키메라 바이러스를 생산하는 방법.The method according to claim 18, wherein the polynucleotide fragment prepared by treating the genome of the LMY ver2 mutant with restriction enzymes AscI and PacI comprises a site encoding an NSP1 protein.
  20. 제18항에 있어서, BP2017-2 변이주의 지놈을 제한효소 AscI 와 PacI 로 처리하여 제조된 폴리뉴클레오타이드 절편은 ORF2 내지 ORF7 부위를 포함하는 것인, 키메라 바이러스를 생산하는 방법.The method according to claim 18, wherein the polynucleotide fragment prepared by treating the genome of the BP2017-2 mutant with restriction enzymes AscI and PacI comprises ORF2 to ORF7 sites.
  21. 제12항의 백신 조성물을 포함하는, 돼지 생식기 호흡기 증후군의 예방 또는 치료용 약학적 조성물.A pharmaceutical composition for the prevention or treatment of porcine genital respiratory syndrome, comprising the vaccine composition of claim 12.
  22. 제12항의 백신 조성물을 돼지에 투여하는 단계를 포함하는, 돼지 생식기 호흡기 증후군을 예방 또는 치료하는 방법.A method of preventing or treating porcine genital respiratory syndrome, comprising administering the vaccine composition of claim 12 to a pig.
PCT/KR2019/017319 2018-12-27 2019-12-09 Chimeric virus of porcine reproductive and respiratory syndrome virus, and vaccine using same WO2020138761A1 (en)

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