WO2018082405A1 - 一种多靶分子浓度检测方法 - Google Patents
一种多靶分子浓度检测方法 Download PDFInfo
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- WO2018082405A1 WO2018082405A1 PCT/CN2017/102220 CN2017102220W WO2018082405A1 WO 2018082405 A1 WO2018082405 A1 WO 2018082405A1 CN 2017102220 W CN2017102220 W CN 2017102220W WO 2018082405 A1 WO2018082405 A1 WO 2018082405A1
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/68—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing involving proteins, peptides or amino acids
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- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6816—Hybridisation assays characterised by the detection means
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- G—PHYSICS
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- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/531—Production of immunochemical test materials
- G01N33/532—Production of labelled immunochemicals
- G01N33/533—Production of labelled immunochemicals with fluorescent label
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- C12Q2563/00—Nucleic acid detection characterized by the use of physical, structural and functional properties
- C12Q2563/137—Metal/ion, e.g. metal label
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- C12Q2563/00—Nucleic acid detection characterized by the use of physical, structural and functional properties
- C12Q2563/143—Magnetism, e.g. magnetic label
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- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
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- C12Q2563/00—Nucleic acid detection characterized by the use of physical, structural and functional properties
- C12Q2563/149—Particles, e.g. beads
Definitions
- the present invention relates to a biological detection method, and more particularly to a method for simultaneously detecting the concentration of a plurality of target molecules.
- the high-sensitivity characteristic means that the target molecule is detected at a very low concentration
- the high-throughput characteristic means that a plurality of lower-concentration target molecules can be simultaneously detected at the same time, which shortens the detection. Time, which reduces the cost of testing, both of which are indispensable features of an excellent bioassay.
- many detection methods are more demanding for high sensitivity and cannot meet the requirements of high throughput at the same time.
- the technical problem to be solved by the present invention is to make up for the deficiencies of the above prior art, and to propose a multi-target molecular concentration detecting method, which can realize high-throughput detection of concentration of a plurality of target molecules, and has high sensitivity.
- a multi-target molecular concentration detection method includes the following steps:
- step S3 adding the plurality of labeled probes to the reaction vessel after step S2, the plurality of target molecules are combined with the corresponding second probe molecules to form a magnetic bead probe-target molecule-labeled probe complex ;
- the magnetic bead probe is added to the reaction vessel after the step S2', and the plurality of target molecules are respectively combined with the corresponding first probe molecules to form a magnetic bead probe-target molecule-labeled probe complex.
- step S5 adding an eluent to the reaction vessel after the step S4, causing the magnetic bead probe-target molecule-labeled probe complex to undergo structural dissociation and dissociation into the magnetic bead probe and the target a molecule and the plurality of labeled probes;
- the surface of the slide is surface-modified by a silane solution containing one or more of an amino group, a carboxyl group, a thiol group, and a hydroxyl group to form a self-assembled film on the surface of the slide;
- step S7 taking the solution after step S5 to form a sample on the glass slide treated in step S6, counting the plurality of labeled probes under a microscope, and calculating the number of various labeled probes in the solution, The concentration of the corresponding target molecule is calculated by the number of each labeled probe.
- the multi-target molecular concentration detecting method of the present invention when detecting the concentration of a plurality of target molecules, different labeled particles are combined with the corresponding target molecules in a one-to-one correspondence, and subsequently dissociated.
- the slide is modified with a silane solution containing a specific group to form a self-assembled film on the surface of the slide, and the surface of the slide exposes the above specific chemical group, so that the slide is displayed in the aqueous solution.
- the labeled particles corresponding to each target molecule are respectively fixed, and the influence of each other is small, which ensures the specific detection of the target molecule, thereby ensuring high-throughput detection while ensuring ultrasensitive detection of each single target molecule.
- a plurality of labeled particles can be used for high-throughput and ultra-sensitive biological detection.
- the lower limit of the detection concentration can be as low as 3 ⁇ 10 -18 mol/L.
- FIG. 1 is a flow chart showing the principle of detection of a detection method according to an embodiment of the present invention
- 2a is a transmission electron micrograph of a gold nanosphere in a detection method according to an embodiment of the present invention
- 2b is a transmission electron micrograph of gold/silver composite nanoparticles in a detection method according to an embodiment of the present invention
- 2c is a transmission electron micrograph of a gold nanorod in a detection method according to an embodiment of the present invention.
- 3 is an SEM image of a composite of a magnetic bead probe-target molecule-labeled probe obtained in the detection method of the embodiment of the present invention
- 4a is an image of a gold nanorod in a dark field microscope in accordance with an embodiment of the present invention.
- 4b is an image of a gold nanosphere in a dark field microscope in accordance with an embodiment of the present invention.
- 4c is an image of a gold/silver composite nanoparticle in a dark field microscope in accordance with an embodiment of the present invention
- 4d is an image of a gold nanorod, a gold nanosphere, and a gold/silver composite nanoparticle in a dark field microscope in a specific embodiment of the present invention
- Figure 5a is a graph showing the relationship between the concentration of HIV and the actual number of detections in a specific embodiment of the present invention.
- Figure 5b is a graph showing the relationship between the concentration of HBV and the actual number of detections in an embodiment of the present invention.
- Figure 5c is a graph showing the relationship between the concentration of HPV and the actual number of detections in a specific embodiment of the present invention.
- Figure 6 is a graph showing the results of detection of seven samples containing different target molecules by a detection method according to a specific embodiment of the present invention.
- the specific embodiment provides a method for detecting the concentration of a plurality of target molecules, and the three target molecules are detected as an example, and the following steps are included:
- the second probe molecule of the first target molecule is coupled to the surface of the first labeled particle to form a first labeled probe
- the second probe molecule of the second target molecule is coupled to the surface of the second labeled particle to form a first
- the second labeled probe couples the second probe molecule of the third target molecule to the surface of the third labeled particle to form a third labeled probe.
- the first probe molecules of the three target molecules are respectively connected to three different magnetic beads, and each group of magnetic beads corresponds to a first probe of a target molecule to form a magnetic bead probe, which is to be explored.
- Needle I was coupled to magnetic beads A
- probe II was coupled to magnetic beads B
- probe III was coupled to magnetic beads C.
- coupling a second probe molecule of the second target molecule to a second labeled particle The sub-surface forms a second labeled probe
- the second probe molecule of the third target molecule is coupled to the surface of the third labeled particle to form a third labeled probe.
- the above target molecule may be a DNA molecule or a protein molecule.
- the labeled particles are particles that can be counted individually under a microscope.
- a variety of different labeled particles are: a combination of noble metal nanoparticles, fluorescent microspheres, quantum dots, and different species in upconverting nanocrystals.
- the plurality of different labeled particles are various noble metal nanoparticles (such as gold nanospheres, gold nanorods, silver nanospheres, gold/silver composite nanoparticles, etc.), and localized surface plasmas of various noble metal nanoparticles
- the body resonance peaks differ by 50 nm or more.
- the absorption cross section and scattering cross section of noble metal nanoparticles are 3-5 orders of magnitude higher than ordinary organic fluorescent molecules, and have a very high signal-to-noise ratio.
- the peak positions are 50 nm apart from each other, which can better distinguish different markers.
- the needle in turn, distinguishes different target molecules to be detected.
- a target molecule-magnetic bead probe complex is formed on the surface of the magnetic bead probe.
- the step is set in an environment of rapid shaking or gentle ultrasound, and the shaking rate is 30 r/min-60r. /min, the ultrasonic frequency is 10KHz-30KHz. This not only increases the chance of the target molecule colliding with the corresponding magnetic bead probe, but also reduces the mismatch probability of only individual base pairing.
- this step is also performed in an environment of rapid shaking or gentle ultrasound, shaking rate
- the frequency is from 30 rpm to 60 rpm
- the ultrasonic frequency is from 10 kHz to 30 kHz. This not only increases the chance of the target molecule colliding with the corresponding magnetic bead probe, but also reduces the mismatch probability of only individual base pairing.
- this step is also carried out in the same rapid shaking or gentle ultrasound environment.
- this step is also carried out in the same rapid shaking or gentle ultrasound environment.
- the number of the magnetic bead probes in the above step (2) or the step (3') is 10 5 - 10 7 if the step (1) is passed, as in the step (1'). Then the number of magnetic beads per group is 10 5 - 10 7 .
- the number of the three labeled probes added in the step (3) or the step (2') is 10 10 -10 12 , respectively.
- step (3) when proceeding in the order of step (2) and step (3), after the end of the reaction of the step (2), the following steps are further included, and then the step (3) is further performed: (a) Introducing a magnet to the outside of the reaction vessel to cause the target molecule-magnetic bead probe complex to aggregate on the side of the magnet, and sucking the liquid in the reaction vessel without taking away the target molecule-magnetic bead probe composite Things. After the step (a), the total volume of the reaction system can be reduced, and then the step (3) can be further carried out, thereby further improving the efficiency of the subsequent reaction.
- the step may specifically be: adding a PBS buffer to the reaction vessel after the step (3) or (3') reaction, and then introducing a magnet outside the reaction vessel to make the magnetic bead probe-target molecule
- the labeled probe complex is collected on one side of the magnet, and the liquid in the reaction vessel is aspirated to remove the unreacted labeled probe, and the operation is repeated until the unreacted labeled probe is completely removed.
- the eluent is added in an amount of 10 to 100 ⁇ L.
- a magnet is introduced outside the reaction vessel after the step (5), and the magnetic bead probe is collected on the side of the magnet.
- the amount of the magnetic bead probe in the solution is reduced, and then the solution is aspirated, so that only the target molecule and the labeled probe are included in the subsequently aspirated solution, and the magnetic bead probe is not introduced.
- Counting under the microscope makes it easier to count the labeled probes, which improves work efficiency.
- the surface of the slide is surface-modified by a silane solution containing one or more of an amino group, a carboxyl group, a thiol group and a hydroxyl group to form a self-assembled film on the surface of the slide, and the surface of the slide is exposed.
- a silane solution containing one or more of an amino group, a carboxyl group, a thiol group and a hydroxyl group to form a self-assembled film on the surface of the slide, and the surface of the slide is exposed.
- the specific chemical group described above allows the surface of the slide to exhibit a certain electrical property in an aqueous solution or can be combined with a labeled probe.
- the slide is surface-modified such that one or more of an amino group, a carboxyl group, a thiol group, and a hydroxyl group are exposed on the surface of the slide.
- an amino group a silane solution containing an amino group and an alcohol may be mixed in a ratio of 3:7 to 1:9 by volume to prepare a mixed solution, and the slide glass is immersed in the mixed solution to make the carrier Glass The surface of the sheet forms a layer of amino self-assembled film.
- the silane solution and the alcohol are mixed in a ratio of 3:7 to 1:9 by volume to prepare a mixed solution, and the slide is immersed in the mixed solution to make the solution The surface of the slide is formed into a self-assembled film of the corresponding group.
- the probe molecule contained in the labeled probe is a DNA sequence
- it is negatively charged in an aqueous solution.
- the surface of the slide is positively charged in the aqueous solution by the above-described self-assembled film forming an amino group.
- the labeled probe and the surface of the slide are attracted by physical charges such that the labeled particles on the labeled probe are immobilized on the slide.
- the surface of the slide is negatively charged in the aqueous solution by modifying the group forming the carboxyl group on the surface of the slide, thereby passing the physical charge.
- the immobilized labeled particles are adsorbed on the slide.
- the above-mentioned group (amino group, carboxyl group, sulfhydryl group, hydroxyl group) may be modified on the slide to have the above-mentioned group on the surface.
- the group (amino group, carboxyl group, sulfhydryl group, hydroxyl group, etc.) can further react with a group in the labeled probe (a group of its own or a group whose subsequent modification is increased), and the binding of the labeled particles is ensured by chemical reaction bonding.
- the probe molecule contained in the labeled probe is an antibody which is not charged.
- an aminosilane-modified glass slide is used to expose the surface of the amino group
- the labeled probe is used to expose the surface of the carboxyl group
- the amino group in the aqueous solution is chemically bonded to the carboxyl group, thereby realizing the labeling particle fixation.
- the physical charge adsorption or chemical reaction combination ensures that the subsequent labeled particles are fixed on the carrier sheet, so that the corresponding labeled particles of each target molecule are respectively fixed, preventing different labeled particles from aggregating each other, and affecting the accuracy of detection.
- FIG. 1 represents a magnetic bead
- 2 represents a first probe molecule of a first target molecule
- 3 represents a first probe molecule of a second target molecule
- 4 represents a first probe molecule of a third target molecule
- 5 Represents the first target molecule
- 6 represents the second target molecule
- 7 represents the third target molecule
- 8 represents the first marker particle
- 9 represents the second marker particle
- 10 represents the third marker particle
- 11 denotes a second probe molecule of the first target molecule
- 12 denotes a second probe molecule of the second target molecule
- 13 denotes a second probe molecule of the third target molecule.
- the three related genes are known as examples, respectively:
- HPV Human papillomavirus
- HBV hepatitis B virus
- Gold nanorods, gold nanospheres, and gold/silver composite nanoparticles are respectively labeled particles.
- the first probe molecule is modified with an amino group at the 3' end, the specific sequence is 5'-TTATTCCAAATATCTTCT-NH2-3', and the second probe molecule is modified with a thiol group at the 5' end, and the specific sequence is 5'-HS -TGCATCCAGGTCATG-3'.
- the first probe molecule is modified with an amino group at the 3' end, the specific sequence is 5'-GTGTGGATAATAGAGAATGTATATCTATGGAAAAAAAAAA-NH2-3', and the second probe molecule is modified with a thiol group at the 5' end, and the specific sequence is 5'-HS -AAAAAAAAAAACAGAAAATGCTAGTGCTTATGCAGCAAAT-3'.
- the first probe molecule is modified with an amino group at the 3' end, the specific sequence is 5'-ATAACTFAAAGCCAAAAAAAAAA-NH2-3', and the second probe molecule is modified with a thiol group at the 5' end, and the specific sequence is 5'-HS -AAAAAAAAAATACCACATCATCCAT-3'.
- the first probe molecules of the three target molecules are respectively coupled to the magnetic beads to form a magnetic bead probe
- the second probe molecules of the HIV, HPV and HBV target molecules are respectively coupled to the gold nanorods
- the gold nanospheres and A labeled probe was formed on the gold/silver composite nanoparticles
- the transmission electron microscope images of the gold nanospheres, gold/silver composite nanoparticles, and gold nanorods used are shown in Figs. 2a, 2b, and 2c, respectively.
- the three target molecules can be paired with the labeled particles.
- HIV, HPV, and HBV target molecules can correspond to gold nanospheres, gold/silver composite nanoparticles, gold nanorods, or gold nanospheres and gold nanorods.
- the gold/silver composite nanoparticles can also correspond to gold nanorods, gold nanospheres, and gold/silver composite nanoparticles, and various combinations can be used as long as the three labeled particles are different from each other.
- step (3) Add 10 12 labeled probes to the test tube of step (2), place the test tube on the shaker, and set the shaker speed to 50 r/min (also in ultrasonic 20 KHz ultrasonic environment) After reacting for 2 hours, the three target molecules bind to the corresponding second probe molecules to form a magnetic bead probe-target molecule-labeled probe complex.
- the magnetic bead probe-target molecule-labeled probe complex obtained in this step was made into an SEM sample (as shown in Fig. 3) and observed.
- a shows the magnetic sphere in the complex of the HIV target molecule
- b shows the magnetic sphere in the complex of the HPV target molecule
- c shows the magnetic sphere in the complex of the HBV target molecule
- df is A magnified picture of a portion of the magnetic sphere shown by ac.
- a large number of (10 3 ) gold nanorods, gold nanospheres and gold/silver composite nanoparticles are coated on the surface of each magnetic bead to verify the strongness between the double-stranded DNA. The interaction does create a stable structure between the magnetic beads and the labeled particles, indicating that the marking is reliable.
- This is the experimental basis for gold nanorods, gold nanospheres and gold/silver composite nanoparticles as probes for label detection.
- a magnet is introduced outside the test tube wall to cause the magnetic bead probe to gather on the side of the test tube having the magnet.
- Figure 4a is an image of a gold nanorod in a dark field microscope showing red.
- Figure 4b is an image of a gold nanosphere in a dark field microscope showing green.
- Figure 4c shows the gold/silver composite The image of the rice particles in the dark field microscope shows blue.
- Figure 4d is an image of a dark field microscope in the presence of gold nanorods, gold nanospheres, and gold/silver composite nanoparticles, including red, green, and blue.
- Fig. 5a is a graph showing the relationship between the concentration of HIV and the actual number of detections
- Fig. 5b is a graph showing the relationship between the concentration of HBV and the actual number of detections
- Fig. 5c is a graph showing the relationship between the concentration of HPV and the actual number of detections. It can be seen from the figure that the actual detection data has a good correspondence with the concentration, and the linearity of the detection is good.
- the concentration calibration curve can be determined, and the definition of the specific embodiment can be further calculated according to the standard deviation of the detection limit of 3 times.
- the detection limit of the DNA detection of the three target molecules is about 3 ⁇ 10 -18.
- Mol/L is 4-5 orders of magnitude higher than the fluorescence intensity-based detection technology, and the detection error of the three target molecules is within 15%, which is relatively reliable, which shows that the invention has extremely high application value.
- Samples 1-3 are samples of target molecule sequences containing only HIV, HBV and HPV, respectively.
- Samples 4-6 contained two components: Sample 4 contained 10 fM of HIV and HBV, Sample 5 contained 10 fM of HIV and HPV, and Sample 6 contained 10 fM of HBV and HPV. All three components in sample 7 contained 10 fM.
- the method of the present embodiment has a better specificity when detecting the simultaneous addition of three kinds of labeled particles. The method of the present embodiment can ensure specificity while achieving high throughput detection.
- the magnetic beads having the superparamagnetic property and coupled with the first probe molecules are used as the capture matrix, and the target molecules to be detected in the target molecule solution are captured on the surface of the magnetic beads, which is easy to count single particles.
- the labeled particles are coupled to a second probe molecule, and the target molecules captured on the surface of the magnetic beads are labeled to form a magnetic bead probe-target molecule-labeled probe complex. Excessive particles not involved in the labeling are separated from the reaction system by the superparamagnetism of the magnetic beads. By elution, the particles participating in the label are released from the surface of the magnetic beads into the solution.
- the slide is modified by a silane solution containing a specific group to form a self-assembled film on the surface of the slide, and the surface of the slide exposes the above specific chemical group, so that the slide is displayed in the aqueous solution. It has a certain electrical property or can react with the labeled probe through a group.
- the probe in the labeled probe is fixed on the slide by electrical attraction or group binding reaction, so that the plurality of labeled particles can be counted separately. Achieve concentration determination of a variety of target molecules.
- the target molecule may also be captured on the labeled particle coupled to the second probe molecule, and then reacted with the magnetic bead coupled to the first probe molecule to form a magnetic bead probe.
- - Target molecule - labeled probe complex may also be captured on the labeled particle coupled to the second probe molecule, and then reacted with the magnetic bead coupled to the first probe molecule to form a magnetic bead probe.
- the target molecule can also be a plurality of proteins, and accordingly, the probe molecule is an antibody and the eluent is a urea solution.
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Abstract
Description
Claims (9)
- 一种多靶分子浓度检测方法,其特征在于:包括以下步骤:S1,将多种靶分子各自对应的第一探针分子偶联到磁珠上,形成磁珠探针;将多种靶分子各自对应的第二探针分子分别偶联到多种不同的标记粒子表面,形成多种标记探针;所述多种不同的标记粒子被观测时能彼此区分开;S2,在反应容器中,将所述磁珠探针和多种靶分子的溶液混合,所述多种靶分子与相应的第一探针分子反应,所述多种靶分子被捕获至所述磁珠探针的表面形成靶分子-磁珠探针复合物;S3,将所述多种标记探针加入经过步骤S2后的反应容器中,所述多种靶分子与相应的第二探针分子结合,形成磁珠探针-靶分子-标记探针复合物;或者分别将步骤S2,S3替换为如下步骤S2’,S3’,S2’,在反应容器中,将多种标记探针的混合液和多种靶分子的溶液混合,多种靶分子与相应的第二探针分子反应,多种靶分子被分别捕获至多种标记探针的表面;S3’,将所述磁珠探针加入经过步骤S2’后的反应容器中,多种靶分子分别与相应的第一探针分子结合,形成磁珠探针-靶分子-标记探针复合物;S4,将未参与反应的所述标记探针除去;S5,在经过步骤S4后的反应容器中加入洗脱液,使得所述磁珠探针-靶分子-标记探针复合物发生结构解离,解离成所述磁珠探针、所述靶分子和所述多种标记探针;S6,通过包含氨基、羧基、巯基、羟基中的一种或者多种的硅烷溶液对载玻片进行表面修饰,使所述载玻片的表面形成一层自组装膜;S7,吸取经过步骤S5后的溶液在经过步骤S6处理过的载玻片上制成样本,在显微镜下对所述多种标记探针进行计数并计算所述溶液中各种标记探针的数量,通过各标记探针的数量计算相应的靶分子的浓度。
- 根据权利要求1所述的多靶分子浓度检测方法,其特征在于:步骤S6中,将所述硅烷溶液与酒精按体积比3:7~1:9的比例混合配制成混合溶液,将载玻片浸泡于所述混合溶液中,使所述载玻片的表面形成一层包含氨基、羧基、巯基、羟基中的一种或者多种的自组装膜。
- 根据权利要求1所述的多靶分子浓度检测方法,其特征在于:步骤S2或者步骤S2’或者步骤S3或者步骤S3’中,所述反应容器置于摇晃状态或者超声振动状态下,摇晃速率为30r/min-60r/min,超声频率为10KHz-30KHz。
- 根据权利要求1所述的多靶分子浓度检测方法,其特征在于:步骤S7中,溶液在吸取之前还包括:在经过步骤S5后的反应容器外引入磁铁,将所述磁珠探针在所述磁铁一侧聚集。
- 根据权利要求1所述的多靶分子浓度检测方法,其特征在于:步骤S1中,所述多种不同的标记粒子为:贵金属纳米粒子、荧光微球、量子点、上转换纳米晶中的不同种的组合。
- 根据权利要求1所述的多靶分子浓度检测方法,其特征在于:步骤S1中,所述多种不同的标记粒子均为多种贵金属纳米粒子,且多种贵金属纳米粒子的局域表面等离子体共振峰位相差50nm以上。
- 根据权利要求6所述的多靶分子浓度检测方法,其特征在于:步骤S1中,为三种靶分子,分别为HIV的基因序列、HPV的基因序列、HBV的基因序列;对应的三种标记粒子选自:金纳米球、金纳米棒、金/银复合纳米粒子。
- 根据权利要求1所述的多靶分子浓度检测方法,其特征在于:步骤S1中,第一探针分子偶联到磁珠上包括同时偶联到同一种磁珠或者分别偶联到不同种的磁珠上。
- 根据权利要求1所述的多靶分子浓度检测方法,其特征在于:步骤S1中,靶分子为DNA分子或者蛋白质分子。
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