WO2017214949A1 - 一种抑制 miRNA-29a 表达的慢病毒载体的构建及其应用 - Google Patents

一种抑制 miRNA-29a 表达的慢病毒载体的构建及其应用 Download PDF

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WO2017214949A1
WO2017214949A1 PCT/CN2016/086076 CN2016086076W WO2017214949A1 WO 2017214949 A1 WO2017214949 A1 WO 2017214949A1 CN 2016086076 W CN2016086076 W CN 2016086076W WO 2017214949 A1 WO2017214949 A1 WO 2017214949A1
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毛侃琅
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  • the present invention relates to the field of gene editing and epigenetics, and in particular to an inhibitory miRNA-2
  • MicroRNAs are a class of endogenous, non-coding RNAs found in eukaryotes, typically between 22 and 25 nt in size. miRNAs are widely distributed in plants, animals, and multicellular organisms, and can Play an important regulatory role, and in the study of human miRNAs, it is found that the expression of miRNA in normal tissues and tumor tissues is significantly different, some miRNAs are lowly expressed in tumor tissues, and some are highly expressed in tumor tissues. This suggests that miRNAs play a crucial role in tumorigenesis.
  • miR-29a is a small RNA closely related to cell proliferation. It is involved in many diseases and can act as a tumor suppressor gene in a variety of tumors. It has the ability to grow and invade cells such as human gastric cancer and bladder cancer. Correlation, its expression level is an important reference for evaluating the benign and malignant glioma, and it is also associated with diseases such as atherosclerotic liver fibrosis, and has important potential application value for the treatment of various tumors.
  • miRNA silencing is the presentation of synthetic oligonucleotides into cells, with endogenous miRNAs.
  • a heteroduplex allows the miRNA to reduce the inhibition of the target gene to achieve regulation of gene function.
  • Silencing of miRNAs is currently difficult to achieve.
  • Commonly used methods for silencing miRNA are anti-miR, antagomiR, miRNA sponge, etc.
  • anti-miR and antagomiR are transient transfection techniques, and the interference effect cannot be stably maintained, while the miRNA sponge effect is far from optimal, and currently There have been reports of optimization of miR-29a interference to enhance its effectiveness.
  • Tough Decoy RNA is a newly developed miRNA inhibitory method that inhibits miRNA by introducing double-stranded RNA to adsorb target miRNAs. Since the introduced RNA is double-stranded and has a secondary structure of a stem loop, it is resistant to intracellular nuclease degradation and can inhibit miRNA for a long-term, stable, and efficient manner. Problem solution
  • the object of the present invention is to provide a Tumor RNA for constructing interference and construct a lentiviral vector capable of stably maintaining interference effects, and apply it to the field of gene editing, in view of the deficiencies in the prior art.
  • a gene interference sequence of miR-29a corresponding TuD RNA was designed and synthesized, and the nucleotide sequence thereof is shown in SEQ ID NO.: 1.
  • This sequence was ligated to the lentiviral vector pLKO.l-puro to obtain a lentiviral vector pLKO-Tud-29a lentiviral vector capable of stably maintaining the interference effect, the nucleotide sequence of which is shown in SEQ ID NO.: 2
  • the present invention designs and synthesizes miR-29a corresponding TuD
  • RNA interference sequence of RNA is linked to the lentiviral vector pLKO.l-puro, and the resulting vector has the function of interfering with miR-29a.
  • the specific integration steps are as follows:
  • Design sequence and miR-29a sequence information provided in miRBase to design TuD for miR-29a
  • RNA oligonucleotide sequence which has the sequence shown in SEQ ID NO.: 1, was commissioned by Shanghai Biotech to synthesize the sequence as a primer.
  • the synthesized sequence is two complementary single-stranded DNAs.
  • the two single-stranded DNAs were dissolved in ddH 2 0, mixed in an equimolar ratio, treated at 95 ° C for 5 min, and then allowed to cool to room temperature at room temperature.
  • the digested vector was recovered using the MinElute Reaction Cleanup Kit, and the TuD obtained in the previous step was further treated with T4 DNA ligase.
  • RNA sequence was ligated into the vector pLKO.l-puro to form the recombinant vector pLKO-TuD-29a, and finally the ligation product was transformed into competent E. coli ToplO and plated onto a plate containing ampicillin LB medium, 37 ° C culture for 14 h. Five single colonies were picked from the plates and added to 5 tubes of ampicillin-containing liquid LB medium for 8 hours at 37 °C. The bacteria were sent to Shanghai Biotech for sequencing. Take the correct sequencing strain and extract it with the endotoxin-free plasmid extraction kit. The extracted plasmid is required by the invention. The plasmid that interferes with miR-29a.
  • miR-29a designed by the present invention interferes with TuD
  • FIG. 1 is a schematic view showing the structure of a pLKO-TuD-29a lentiviral expression vector according to an embodiment
  • FIG. 2 is a flow diagram showing the steps required to transform the lentiviral expression vector shown in FIG. 1 into the lentiviral vector of the present invention
  • Example 3 is the expression level of miR-29a of 16HBE cells and TnD-29a cells in Example 6.
  • the lentiviral plasmid pLKO.1-puro vector used in the present invention was purchased from Addgene; the human bronchial epithelial cells (16HBE cell strain) used in the present invention were purchased from the United States ATCC; S-Poly(T) hsa-miR- 29a qPCR-assay primer set miRNA reverse transcription and fluorescence quantification kit was purchased from Shenzhen Anran Biotechnology Co., Ltd.
  • RNA design sequence and the sequence information of miR-29a provided in miRBase, designed the Tu D RNA oligonucleotide sequence targeting miR-29a, the sequence of which is shown in SEQ ID NO.: l, commissioned by Shanghai Biotech to synthesize the gene The way to synthesize.
  • the synthesized sequence is two complementary single-stranded DNA.
  • the two single-stranded DNAs were dissolved in ddH20, mixed at an equimolar ratio, treated at 95 ° C for 5 min, and allowed to cool to room temperature by allowing them to stand at room temperature.
  • RNA sequence was ligated into the vector pLKO.l-puro to form the recombinant vector pLKO-Tud-29a, and finally the ligation product was transformed into competent E. coli ToplO and plated onto a plate containing ampicillin LB medium, 37 ° C culture 14
  • the dilution ratio of the recombinant lentivirus solution is 1, 10, 100, 1000, 10000, 10,000, 1000000, 10000000, and 100000000, and the solution gradient of the recombinant lentivirus is used in the medium.
  • T 20000 x R, where T is the lentivirus titer, T is in units of TU/mL, and R is the dilution factor.
  • the lentivirus titer of the package is greater than 10000000 TU/mL, indicating that the packaging of the lentivirus is successful.
  • 16HBE cells were seeded in 6-well plates, 1000000 cells per well, and the cell density was about 50% after 12 hours.
  • the virus solution was taken separately, and the virus was diluted 10 times with DMEM complete medium, and then polyglycolamine was added.
  • the medium in the 6-well plate was removed, and the virus-containing DMEM complete medium (containing 10% fetal bovine serum) was added. After 24 hours, the virus-containing DMEM complete medium was discarded, and the fresh DMEM complete medium was replaced. After 24 hours, 0.5 was used.
  • Cells were screened for puromycin at a concentration of ⁇ ⁇ / ⁇ 1. After 10 days of screening, the medium was changed once every 3 days, and the concentration of puromycin was continuously increased to 1.0 g/ml.
  • the cell line obtained by the screening was named TuD-29a cell line.
  • the miRNA extraction and isolation kit extracts the miRNAs of these cells, and then uses S-Poly O hsa-miR-29a qPCR-assay primer
  • the set kit reverse-transcribes and tails the miRNA to obtain the corresponding cDNA.
  • the cDNA of each of the two cells was used as a template, and the expression level of h Sa -miR-29a was detected by real-time PCR.
  • the experiment was repeated three times, and three parallel samples were set in each well, and snord 44 was used as an internal reference.
  • the results are shown in Fig. 3. It can be seen that the expression level of miR-29a in TuD-29a cells is 63% lower than that in 16HBE cells, and the difference is statistically significant (p ⁇ 0.01), indicating that the TuD-29a cell line was successfully constructed.

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Abstract

一种特异抑制人miRNA-29a表达的慢病毒载体的构建及其应用,包括pLKO.1-puro表达载体的基本序列、抗性基因序列、多克隆位点序列、启动子序列和靶向miR-29a的寡核苷酸序列。所述多克隆位点包括Age I酶切位点和EcoR I酶切位点;所述靶向miR-29a的寡核苷酸序列正向插入所述多克隆位点中。pLKO-Tud-29a慢病毒表达载体具有转染效率高,用量少,可持续、高效、稳定、特异地抑制人miRNA-29a表达的优点,可作为有力工具应用于制备治疗miRNA-29a表达异常相关疾病的药物。

Description

发明名称:一种抑制 miRNA-29a表达的慢病毒载体的构建及其应用 技术领域
[0001] 本发明涉及基因编辑领域和表观遗传领域研究, 具体地涉及一种抑制 miRNA-2
9a表达的慢病毒载体的构建及其应用。
背景技术
[0002] MicroRNA (miRNA) 是在真核生物中发现的一类内源性的非编码 RNA, 大小 一般在 22-25 nt之间, miRNA广泛分布于植物、 动物和多细胞生物中, 并且能发 挥重要的调节作用, 而在人类 miRNA的研究中, 发现 miRNA在正常组织和肿瘤 组织中的表达有着显著差异, 有些 miRNA会在肿瘤组织中有低表达, 有些则在 肿瘤组织中有高表达, 这说明 miRNA在肿瘤发生过程中起了至关重要的作用。
[0003] miR-29a是一个与细胞增殖紧密相关的小分子 RNA, 参与多种疾病, 可在多种 肿瘤中起到抑癌基因作用, 它与人胃癌和膀胱癌等细胞的生长和侵袭能力相关 , 其表达水平是评价胶质瘤良恶性的重要参考指标, 还与动脉粥样硬化肝纤维 化等疾病相关, 对多种肿瘤的治疗具有重要的潜在应用价值。
技术问题
[0004] 目前 miRNA功能研究一般通过 miRNA过表达和沉默来实现, miRNA沉默是把 人工合成的寡核苷酸小分子提呈到细胞内, 与内源性 miRNA
形成异源双链, 使 miRNA降低对靶基因的抑制作用, 以实现对基因功能的调控 。 miRNA沉默, 特别是长期稳定沉默目前较难以实现。 常用的沉默 miRNA的方 法主要有 anti-miR, antagomiR , miRNA sponge等, 其中 anti-miR和 antagomiR为 瞬时转染技术, 其干扰效果不能稳定保持, 而 miRNA sponge效果远未达到最优 , 目前也未出现针对 miR-29a干扰进行优化提升其效果的报道。
[0005] Tough Decoy RNA (Tud RNA) 是一种新开发出的 miRNA抑制手段, 其通过引 入双链 RNA对目标 miRNA进行吸附, 达到抑制 miRNA的目的。 由于引入的 RNA 为双链并且带有茎环的二级结构, 因此其够抵抗胞内核酸酶的降解, 能长期、 稳定和高效地抑制 miRNA。 问题的解决方案
技术解决方案
[0006] 本发明的目的是针对现有技术中的不足, 提供一种用于构建 干扰的 Tu D RNA, 并构建能稳定保持干扰效果的慢病毒载体, 将其应用到基因编辑领域
[0007] 为解决上述技术问题, 本发明釆用的技术方案如下:
[0008] 设计并合成 miR-29a相应 TuD RNA的基因干扰序列, 其核苷酸序列如 SEQ ID NO.: 1所示。 将该序列与慢病毒载体 pLKO.l-puro连接, 获得能稳定保持干扰效 果的慢病毒载体 pLKO-Tud-29a慢病毒载体, 其核苷酸序列如 SEQ ID NO.: 2所示
[0009] 本发明通过设计并合成 miR-29a相应 TuD
RNA的基因干扰序列, 与慢病毒载体 pLKO.l-puro连接, 形成的载体具有能干扰 miR-29a的作用, 具体整合的步骤如下:
[0010] S10、 miR-29a TuD的设计与合成: 根据 TuD
设计序列和 miRBase中提供的 miR-29a的序列信息, 设计出针对 miR-29a的 TuD
RNA寡核苷酸序列, 其序列如 SEQ ID NO.: 1所示, 委托上海生工以引物的方式 合成该序列。
[0011] S20、 合成好的序列是两条互补的单链 DNA。 将两条单链 DNA溶解于 ddH 20中 , 按照等摩尔比混合后, 95°C处理 5 min, 再将其置于室温使其自然冷却至室温
[0012] S30、 提取载体 pLKO.l-puro, 使用 Age I和 Eco RI酶双酶切处理 16
h后, 用 MinElute Reaction Cleanup Kit回收酶切后的载体, 再用 T4 DNA连接酶将 上一步得到的 TuD
RNA序列连接到载体 pLKO.l-puro中, 形成重组载体 pLKO-TuD-29a, 最后将连 接产物转化到感受态大肠杆菌 ToplO中, 并涂布到含氨苄青霉素 LB培养基的平板 上, 37 °C培养 14 h。 从平板中挑取 5个单菌落, 分别加入到 5支含氨苄青霉素的液 体 LB培养基的试管中 37 °C振荡培养 8 h后, 将菌液送至上海生工测序。 取测序正 确的菌株里并用无内毒素质粒小量提取试剂盒提取, 提取的质粒为本发明所需 的干扰 miR-29a的质粒。
发明的有益效果
有益效果
[0013] 本发明设计的 miR-29a干扰 TuD
RNA序列带有茎环结构, 不容易降解, 双链的 Tud
RNA相对目前常用的单链的 miRNA
sponge, 其结合效率更高, 能更好地实现 imR-29a的干扰。
对附图的简要说明
附图说明
[0014] 图 1为一实施方式所述 pLKO-TuD-29a慢病毒表达载体的结构示意图;
[0015] 图 2为将图 1所示的慢病毒表达载体改造为本发明所述慢病毒载体所需步骤的流 程图;
[0016] 图 3为实施例六中 16HBE细胞与 TnD-29a细胞的 miR-29a的表达水平情况。
实施该发明的最佳实施例
本发明的最佳实施方式
[0017] 根据下述实施例, 可以更好地理解本发明。 然而, 本领域的技术人员容易理解 , 实施例所描述的具体的物料配比、 工艺条件及其结果仅用于说明本发明, 而 不应当也不会限制权利要求书中所详细描述的本发明。 下述实施例中所用的方 法如无特别说明均为常规方法; 所述试剂如无特殊说明, 均为市售产品。 具体 步骤可参见: 《Molecular Cloning: A Laboratory Manual》 (Sambrook, J., Russell, David W., Molecular Cloning: A Laboratory Manual, 3rd edition, 2001, NY, Cold Spring Harbor)
[0018] 本发明所使用的慢病毒质粒 pLKO.1-puro载体购自 Addgene; 本发明所使用的人 支气管上皮细胞 (16HBE细胞株) 购自美国 ATCC; S-Poly(T) hsa-miR-29a qPCR-assay primer set miRNA逆转录和荧光定量试剂盒购自深圳市盎然生物科技 有限公司。
[0019] 实施例一 miR-29a TuD RNA的设计与合成 [0020] 根据 TuD
RNA设计序列和 miRBase中提供的 miR-29a的序列信息, 设计出针对 miR-29a的 Tu D RNA寡核苷酸序列, 其序列如 SEQ ID NO.:l所示, 委托上海生工以基因合成 的方式合成。
[0021] 实施例二序列的退火
[0022] 合成好的序列是两条互补的单链 DNA。 将两条单链 DNA溶解于 ddH20中, 按 照等摩尔比混合后, 95°C处理 5 min, 再将其置于室温使其自然冷却至室温。
[0023] 实施例三重组 pLKO-Tud-29a慢病毒重组载体的构建
[0024] 提取载体 pLKO. l-puro, 使用 Age I和 Eco RI酶双酶切处理 16 h后, 用 MinElute Reaction Cleanup Kit回收酶切后的载体, 再用 T4 DNA
连接酶将上一步得到的 TuD
RNA序列连接到载体 pLKO.l-puro中, 形成重组载体 pLKO-Tud-29a, 最后将连接 产物转化到感受态大肠杆菌 ToplO中, 并涂布到含氨苄青霉素 LB培养基的平板上 , 37 °C培养 14
h。 从平板中挑取 5个单菌落, 分别加入到 5支含氨苄青霉素的液体 LB培养基的试 管中 37。(:振荡培养 8
h后, 将菌液送至上海生工测序, 测序结果完全正确的即为 pLKO-Tud-2 慢病毒 重组载体。
[0025] 实施例四慢病毒滴度测定
[0026] 第一天, 将 293FT细胞接种到多孔板中, 每个孔接种 200000个细胞, 每个孔加 入 500 培养基, 37°C、 5<¾C02培养过夜;
[0027] 第二天, 按所述重组慢病毒的溶液的稀释比例为 1、 10、 100、 1000、 10000、 1 00000、 1000000、 10000000和 100000000, 用培养基将所述重组慢病毒的溶液梯 度稀释, 接着分别将 100 梯度稀释的所述重组慢病毒的溶液与 1( L多孔板中 的细胞培养液在多孔板的不同孔中混合转染, 转染开始后 24h, 吸去培养基并换 成 50( L含 5U DNasel的新鲜培养基, 37°C下培养 30min以去除可能附着于细胞表 面的残余质粒 DNA, 然后将培养基换成 l mL正常培养基, 继续培养 48h;
[0028] 第四天, 吸去所述多孔板的每个孔中的培养基, 加入 50(^L胰酶 -EDTA溶液消 化细胞, 在 37°C反应 1分钟, 接着加入培养基终止消化反应并将细胞吹洗下, 离 心收集每个孔的细胞, 抽提每孔细胞的总 RNA, 接着逆转录得到每孔细胞的总 c DNA; 以及分别对得到的所述每孔细胞的总 cDNA进行荧光定量 PCR, 得到每孔 细胞的 α值, 选择与对照组 ct值差异最小伹超过 2的实验组, 得到其稀释倍数, 按照以下公式计算慢病毒滴度:
[0029] T=20000xR, 其中, T为慢病毒滴度, T的单位为 TU/mL, R为稀释倍数。
[0030] 经计算, 本次包装的慢病毒滴度大于 10000000 TU/mL, 表明此次慢病毒的包装 是成功的。
[0031] 实施例五慢病毒转导 16HBE细胞
[0032] 接种 16HBE细胞于 6孔板中, 每孔 1000000个细胞, 12h后细胞密度约为 50% , 分别取病毒液, 用 DMEM完全培养基 10倍稀释病毒, 再加入聚凝胺
(polybrene)至终浓度为 8 g/mL。 去除 6孔板中的培养基, 加入含病毒的 DMEM 完全培养基(含 10%胎牛血清), 24h后弃去含病毒的 DMEM完全培养基, 更换新 鲜的 DMEM完全培养基, 24h后用 0.5 μΕ/ηι1浓度的嘌呤霉素筛选细胞。 筛选 10d, 每隔 3d更换培养基一次, 并不断的增加嘌呤霉素的浓度至 1.0 g/ml。 筛 选获得的细胞株命名为 TuD-29a细胞株。
[0033] 实施例六荧光定量 PCR检测 miR-29a的表达水平变化
[0034] 分别接种正常 16HBE细胞、 TuD-29a细胞至 6孔板 (每孔约 300000个) , 培养细 胞约 24 h后至融合度 80%。 用 miRcute
miRNA提取分离试剂盒提取这些细胞的 miRNA, 然后用 S-Poly O hsa-miR-29a qPCR- assay primer
set试剂盒对 miRNA进行逆转录和加尾, 得到相应的 cDNA。 取 2种细胞的 cDNA 各 2 L为模板, 荧光定量 PCR检测 hSa-miR-29a表达水平的变化, 实验重复 3次, 每孔设置 3个平行样,以 snord 44作为内参。 结果如图 3所示, 可以看到与 TuD-29a 细胞的 miR-29a的表达水平比 16HBE细胞低 63% , 差异有统计学意义 (p<0.01) , 说明 TuD-29a细胞株构建成功。
工业实用性
[0035] 本发明设计的 miR-29a干扰 TuD 16 086076
RNA序列带有茎环结构, 不容易降解, 双链的 Tud
RNA相对目前常用的单链的 miRNA
sponge, 其结合效率更高, 能更好地实现 miR-29a的干扰。

Claims

[权利要求 1] 一种特异抑制人 miRNA-29a表达的慢病毒载体, 其特征在于包括 pLKO.l-puro表达载体的基本序列、 抗性基因序列、 多克隆位点序列 、 启动子序列和靶向 miR-29a的寡核苷酸序列。 所述多克隆位点包括 Age I酶切位点和 EcoR I酶切位点; 所述靶向 miR-29a的寡核苷酸序列 由 Age I酶切位点十颈 I序列 +靶核苷酸序列 +颈 II序列 +环 +颈 II序 列互补序列 +耙核苷酸序列互补序列 +颈 I序列互补序列十终止位点 序列 +EcoR I酶切位点组成。
[权利要求 2] 根据权利要求 1所述的一种特异抑制人 miRNA-29a表达的慢病毒载体
, 其特征在于所述靶向 miR-29a的寡核苷酸序列正向插入所述多克隆 位点中, 其核苷酸序列为 5'-
Figure imgf000009_0001
C -3' (SEQ ID NO.: 1) 。
[权利要求 3] 根据权利要求 1-2所述的一种特异抑制人 miRNA-29a表达的慢病毒载 体 , 其特征在于将所述耙向 miR-29a的寡核苷酸序列插入到 pLKO.1-p uro表达载体中的步骤如下:
SI. miR-29a TuD的设计与合成: 根据 TuD设计序列和 miRBase中提供 的 miR-29a的序列信息, 设计出针对 miR-2 的 TuD RNA寡核苷酸序 歹 |J , 其序列如 SEQ ID NO.: 1所示, 委托上海生工以引物的方式合成 该序列;
S2.
合成好的序列是两条互补的单链 DNA。 将两条单链 DNA溶解于 ddH2 0中, 按照等摩尔比混合后, 95°C处理 5 min, 再将其置于室温使其自 然冷却至室温。
S3.提取载体 pLKO.1-puro , 使用 Age I和 Eco RI酶双酶切处理 16 h后, 用 MinElute Reaction Cleanup Kit回收酶切后的载体, 再用 T4 DNA连 接酶将上一步得到的 TuD RNA序列连接到载体 pLKO.l-puro中, 形成 重组载体 pLKO-TuD-29a, 最后将连接产物转化到感受态大肠杆菌 To plO中, 并涂布到含氨苄青霉素 LB培养基的平板上, 37 °C培养 14 h。 从平板中挑取 5个单菌落, 分别加入到 5支含氨苄青霉素的液体 LB培 养基的试管中 37 °C振荡培养 8 h后, 将菌液送至上海生工测序。 取测 序正确的菌株里并用无内毒素质粒小量提取试剂盒提取, 提取的质粒 为本发明所需的干扰 miR-29a的质粒。 。
[权利要求 4] 根据权利要求 1所述的一种特异抑制人 miRNA-29a表达的慢病毒载体 的应用方法, 其特征在于包含以下步骤:
51.将含有 pLKO-TuD-29a载体的 ToplO大肠杆菌置于 10 mL LB培养基 中, 恒温空气摇床上 37° (:, 300 01培养12-16 11至00600=0.6-0.8, 将 得到的菌液置于离心机中, 10000 rpm离心 l min, 弃上清, 获得所需 菌体, 并用 E.Z.N.A. Endo-free Plasmid DNA Mini Kit I提取其中的质粒
52.培养 293FT细胞。 取生长状态良好的 293FT细胞接种到 10 cm培养 皿中, 每个皿接种 5000000个细胞, 加入 DMEM无双抗培养基培养细 胞约 18 h后至融合度达到 80-90%后, 取上一步得到的所需慢病毒载体 10 g、 pMDLg/pRRE pRSV-Rev和 pMD-G载体各 5
, 用 Lipofectamine 2000转染至 293FT细胞中, 转染后 4- 6
h更换成 DMEM完全培养基, 继续培养 48h后收集含病毒的上清培养 基, 6000 g离心 lO min后, 取上清液再用 0.45μιη过滤头进行过滤, 获 得慢病毒液。
53.培养 293FT细胞, 取生长状态良好的 293FT细胞接种到 24孔板中, 每个孔接种 200000个细胞, 加入 500 培养基, 37°C, 5%C02培养过 夜。 第二天, 按病毒原液: 培养基的稀释比例为 10-10000000。 分别 制备病慢毒梯度稀释液各 100 L, 然后吸取各孔原培养基各 100 μί, 再加入慢病毒稀释液各 100 开始转染。 转染幵始后 24 h, 吸出含慢 病毒的培养基, 换成 500 含 5 U DNasel 的新鲜培养基, 37°C下培养 30 min以去除可能附着于细胞表面的残余 质粒 DNA。 然后将培养基换成 l mL正常培养基, 继续培养 48 h。 S4.小心吸走每个孔的全部培养基, 加入 500 胰酶 -EDTA溶液消化 细胞, 在 37°C反应 1分钟。 接着加入培养基终止消化反应并将细胞吹 洗下, 离心收集每个孔的细胞。 抽提每孔细胞的总 RNA, 接着逆转 录为 cDNA。 以分别对得到的所述每孔细胞的总 cDNA进行荧光定量 P CR, 得到每孔细胞的 Ct值, 选择与对照组 Ct值差异最小但超过 2的实 验组, 得到其稀释倍数, 按照以下公式计算慢病毒滴度:
T=20000xR , 其中, T为慢病毒滴度, T的单位为 TU/mL, R为稀释倍 数。
只要慢病毒滴度达到 10000000 TU/mL以上, 即认为成功获得所需慢 病毒液。
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Cited By (1)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN108517335A (zh) * 2018-04-20 2018-09-11 深圳市疾病预防控制中心(深圳市卫生检验中心、深圳市预防医学研究所) 一种肝细胞miR-199b低表达的慢病毒表达载体及其构建方法

Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN102703507A (zh) * 2012-05-18 2012-10-03 深圳市疾病预防控制中心 特异抑制肝细胞CYP2E1基因表达的shRNA慢病毒表达载体及其构建方法与应用
CN102939090A (zh) * 2010-04-01 2013-02-20 法兰克福大学 miRNA-29表达拮抗剂及其在预防和治疗主动脉瘤中的用途
WO2015164786A1 (en) * 2014-04-25 2015-10-29 University Of Massachusetts Recombinant aav vectors useful for reducing immunity against transgene products

Patent Citations (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN102939090A (zh) * 2010-04-01 2013-02-20 法兰克福大学 miRNA-29表达拮抗剂及其在预防和治疗主动脉瘤中的用途
CN102703507A (zh) * 2012-05-18 2012-10-03 深圳市疾病预防控制中心 特异抑制肝细胞CYP2E1基因表达的shRNA慢病毒表达载体及其构建方法与应用
WO2015164786A1 (en) * 2014-04-25 2015-10-29 University Of Massachusetts Recombinant aav vectors useful for reducing immunity against transgene products

Non-Patent Citations (4)

* Cited by examiner, † Cited by third party
Title
DANGWAL, S. ET AL.: "microRNA Therapeutics in Cardiovascular Disease Models", ANNU. REV. PHARMACOL. TOXICOL., 2 October 2013 (2013-10-02), pages 185 - 203, XP055449738 *
HARAGUCHI, T. ET AL.: "Vectors expressing efficient RNA decoys achieve the long-term suppression of specific microRNA activity in mammalian cells", NUCLEIC ACIDS RESEARCH, vol. 37, no. 6, 17 February 2009 (2009-02-17), pages e43, XP002656483 *
SONG, X. ET AL.: "MicroRNA-29a promotes apoptosis of monocytes by targeting STAT3 during sepsis", GENETICS AND MOLECULAR RESEARCH., vol. 14, no. 4, 28 October 2015 (2015-10-28), pages 13746 - 13753, XP055448975 *
XIE, XING ET AL.: "Construction of a human bronchial epithelial hsa-miR-148a-3p knockdown cell line", CARCINOGENESIS,TERATOGENESIS & MUTAGENESIS, vol. 26, no. 3, 31 May 2014 (2014-05-31), pages 204 - 208 and 212, XP055447857 *

Cited By (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
CN108517335A (zh) * 2018-04-20 2018-09-11 深圳市疾病预防控制中心(深圳市卫生检验中心、深圳市预防医学研究所) 一种肝细胞miR-199b低表达的慢病毒表达载体及其构建方法
CN108517335B (zh) * 2018-04-20 2019-11-26 深圳市疾病预防控制中心(深圳市卫生检验中心、深圳市预防医学研究所) 一种肝细胞miR-199b低表达的慢病毒表达载体及其构建方法

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