WO2006033352A1 - Antibacterial peptide and lactobacillus capable of producing the peptide - Google Patents

Antibacterial peptide and lactobacillus capable of producing the peptide Download PDF

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WO2006033352A1
WO2006033352A1 PCT/JP2005/017385 JP2005017385W WO2006033352A1 WO 2006033352 A1 WO2006033352 A1 WO 2006033352A1 JP 2005017385 W JP2005017385 W JP 2005017385W WO 2006033352 A1 WO2006033352 A1 WO 2006033352A1
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lys
antibacterial
ala
leu
peptide
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PCT/JP2005/017385
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French (fr)
Japanese (ja)
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Shoko Koga
Megumi Moriyama
Izumi Kawakami
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Omu Milk Products Co., Ltd.
Kumamoto Flour Milling Co., Ltd.
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Priority to JP2006536395A priority Critical patent/JPWO2006033352A1/en
Publication of WO2006033352A1 publication Critical patent/WO2006033352A1/en

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    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K14/00Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
    • C07K14/195Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from bacteria
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12NMICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
    • C12N1/00Microorganisms, e.g. protozoa; Compositions thereof; Processes of propagating, maintaining or preserving microorganisms or compositions thereof; Processes of preparing or isolating a composition containing a microorganism; Culture media therefor
    • C12N1/20Bacteria; Culture media therefor
    • C12N1/205Bacterial isolates
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12RINDEXING SCHEME ASSOCIATED WITH SUBCLASSES C12C - C12Q, RELATING TO MICROORGANISMS
    • C12R2001/00Microorganisms ; Processes using microorganisms
    • C12R2001/01Bacteria or Actinomycetales ; using bacteria or Actinomycetales
    • C12R2001/46Streptococcus ; Enterococcus; Lactococcus

Definitions

  • the present invention relates to a novel lactic acid strain and a novel antibacterial peptide produced by the strain.
  • antibacterial substances produced by lactic acid bacteria low molecular weight compounds such as organic acids such as lactic acid, hydrogen peroxide, and diacetyl are already known.
  • antibacterial substances consisting of peptides pacteriocins
  • Nisin Z Reur. J.
  • Nisin is derived from lactic acid bacteria and is a highly safe antibacterial substance that is degraded by human digestive enzymes and is widely used as a food preservative mainly in Europe and the United States. However, since nisin is stable in the acidic range and neutral in the alkaline range and unstable in the alkaline range, foods that can be used as food preservatives are limited to those that are acidic or weakly acidic.
  • Non-Patent Document 1 J. Am. Chem. Soc. 1971 Sep 8; 93 (18): 4634-5
  • Non-Patent Document 2 Eur. J. Biochem. 1991 Nov 1; 201 (3): 581-4
  • An object of the present invention is to find a novel lactic acid bacterium that can produce an antibacterial substance that has not been known so far, and is effective in the preservation of food, sterilization and disinfection, etc., even in neutral and alkaline regions.
  • the present invention provides an antimicrobial peptide having a primary structure consisting of the following amino acid sequence (SEQ ID NO: 1).
  • the N-terminal methionine is formylated.
  • an antibacterial peptide suitable as a material for an antibacterial agent useful for food preservation, antibacterial 'disinfection and the like is provided.
  • FIG. 1 shows the results of a pH stability test in which the antibacterial peptide of the present invention (latathicin Q) was compared with nisin Z.
  • FIG. 2 shows the results of a thermal stability test comparing the antibacterial peptide of the present invention (latathicin Q) with nisin Z.
  • FIG. 3 shows the results of an ethanol stability test in which the antimicrobial peptide (latathicin Q) of the present invention was compared with nisin Z.
  • the antibacterial substance obtained by the present invention is a novel peptide (batteriocin) produced by a ratatococcus' latatis strain isolated from corn produced in Aso, Kumamoto Prefecture. It is considered to be a new type of bacteriocin composed of an amino acid sequence different from that of ratatocossin.
  • MRS medium manufactured by OXOID
  • M17 manufactured by MERCK
  • enrichment culture distilled water
  • Screening using antibacterial activity as an index was performed using bacteria isolated from the enrichment culture. That is, after growing colonies on the MRS agar medium, overlay the soft agar medium mixed with the culture solution of various gram-positive bacteria (the above-mentioned microorganisms causing food deterioration) as the indicator bacteria, and culture at the optimum temperature. Thereafter, a strain in which a growth inhibition circle of indicator bacteria formed around the colony was observed was isolated.
  • the 1005 strain has been deposited with the Patent Microorganism Depositary, and the deposit number is NITE BP-23 (Hara Depositary 15 September 2004).
  • the base sequence (16S rDNA) of the gene encoding 16S rRNA is the base sequence (16S rDNA) of the gene encoding 16S rRNA.
  • the base sequence (16S rDNA) of the gene encoding 16S rRNA was determined, and homology search was performed using a database. That is, the i 6S rDNA was examined for about 500 bp in the upstream portion of about 1.5 kbp.
  • a sequencing kit (manufactured by Falmasia) was used.
  • the culture supernatant obtained by centrifuging was collected after culturing in the MRS liquid medium for 18 hours.
  • the pH was adjusted to 6 using 1M NaOH and then sterilized by filtration as a test sample.
  • Test samples were diluted 2-fold and used for antibacterial activity tests. 10 ⁇ l of a serial dilution of the test sample was dropped on a soft agar medium containing the indicator bacteria.
  • Antibacterial activity was calculated as XX 1000/10 (AU / ml), where X is the maximum dilution factor at which a well-defined growth-inhibiting circle was observed.
  • the culture supernatant of the QU 1005 strain showed the antibacterial spectrum shown in Table 2.
  • Isolate QU 1005 was precultured in MRS medium, and 8 ml of the preculture was inoculated into 250 ml of MRS medium. After stationary culture at 30 ° C for 12 hours, the supernatant was collected after centrifugation at 6000 rpm. The activity of the culture supernatant (200 ml) against the indicator bacterium Bacillus coagulans JCM 2257 ⁇ was 2.56 ⁇ 10 6 (AU / ml). Three times (600 ml) of chilled acetone was added to the culture supernatant, cooled at 30 ° C. for 1 hour, and then centrifuged at 6000 rpm to precipitate and collect antibacterial substances. The collected precipitate was redissolved in 100 ml of 20 mM sodium phosphate buffer (pH 5.7).
  • the column was filled with 16 ml of SP-Sepharose cation exchange resin (manufactured by Pharmacia), 100 ml of redissolved sample was added, and the column was equilibrated with sodium phosphate buffer.
  • Sodium phosphate buffer (40 ml each) containing 0.25, 0.5, 0.75, l.OM NaCl was applied at a flow rate of 2 ml / minute, and fractional elution was performed stepwise.
  • the activity of the 0.25M NaC1 eluted fraction was 2.05 ⁇ 10 6 (AU / ml).
  • the 0.25M NaCl eluate (40 ml) was subjected to reverse phase HPLC (column: RESOURCE RPC 3 ml manufactured by Falumasia).
  • As the mobile phase MilliQ water containing 0.1% trifluoroacetic acid was used, and linear concentration gradient of acetonitrile (gradient 20 to 80%), flow rate of 1 ml / min, and fractionation at 30 ml at 1 ml per fraction.
  • a UV-visible spectrophotometer (wavelength 220, 280 nm) was used as the detector. Measure the antibacterial activity of 30 fraction samples and A strong fraction was obtained.
  • the purified antibacterial substance thus obtained exhibited the antibacterial spectrum shown in Table 3.
  • nisin A a known bacteriocin
  • ratathicin Q showed higher levels and antibacterial activity (small level, MIC (minimum growth inhibitory concentration) value) against Enteroocccus genus.
  • the antibacterial substance purified as described above was subjected to N-terminal amino acid analysis using an amino acid sequencer utilizing Edman degradation. As a result, Edman degradation did not proceed and the amino acid sequence could not be obtained.
  • N-terminal amino acid analysis of the peptide obtained by cyanogen bromide treatment was performed in the same manner as described above. As a result, 50 amino acid residues were revealed from the N-terminus of the peptide shown in SEQ ID NO: 2. As a result of calculating the mass of the antibacterial peptide deduced from the obtained amino acid sequence IJ, it was not consistent with the mass of the above (5), suggesting that the obtained amino acid sequence was insufficient. .
  • a digitate primer was constructed from a part of the amino acid sequence of the antibacterial peptide obtained as described above, and the structural gene of the antibacterial peptide was obtained by polymerase chain reaction (PCR).
  • PCR polymerase chain reaction
  • QU 1005 strain power Whole genomic DNA was extracted by CTAB method and used as PCR in PCR.
  • a single amplified fragment was obtained by the nested PCR method.
  • the amplified fragment was ligated into pGEM-T cloning vector (Promega), and E. coli JM109 was transformed by the heat shock method using this ligation product.
  • pGEM-T cloning vector Promega
  • E. coli JM109 was transformed by the heat shock method using this ligation product.
  • transformants were cultured in LB medium for 8 hours, the plasmid was extracted using MagExtractor-Plasmid (manufactured by TOYOBO). This plasmid was used as a type of sequencing reaction.
  • a sequencing kit (manufactured by Falmasia) was used.
  • nucleotide sequence of SEQ ID NO: 3 (nucleotide arrangement was obtained.
  • amino acid sequence obtained by converting the obtained nucleotide sequence was identical to the sequence of residues 10 to 39 of SEQ ID NO: 2. .
  • a new primer was constructed based on the base sequence obtained here, and the base sequence encoding the C-terminal portion of the antibacterial peptide was obtained by anchor PCR.
  • the whole genomic DNA of the QU 1005 strain was digested with restriction enzymes and ligated randomly to a PUC18 cloning vector in which MCS (multicloning site) was similarly treated with restriction enzymes.
  • a single amplified fragment was obtained by the nested PCR method using the ligation product thus obtained.
  • the obtained PCR amplified fragment was transformed into E. coli JM109 by the same method as described above, and sequence analysis was performed.
  • the base sequence of SEQ ID NO: 4 was obtained.
  • the amino acid sequence obtained by converting the obtained base sequence was consistent with the sequence of residues 36 to 50 of SEQ ID NO: 2.
  • the presence of isoleucine and lysine residues was confirmed after the 50th glycine residue of SEQ ID NO: 2, followed by a stop codon.
  • the isolate QU 1005 strain and nisin Z-producing strain were cultured in a basic medium containing glucose, yeast extract and calcium carbonate. After centrifuging the culture solution, rataticin Q and nisin Z were roughly purified from the obtained culture solution supernatant using a synthetic adsorbent. The following tests were performed using the obtained roughly purified sample. In HPLC analysis, the amount showing the same peak area as 1 unit of nisin (25 ng of purified nisin) was defined as one unit of each bacteriocin.
  • Crudely purified ratathicin Q and nisin koji were prepared using sterile distilled water at 4200 units / ml, respectively.
  • Sampnole adjusted to pH 3-9 with N / 5 hydrochloric acid and N / 10 sodium hydroxide is stored at 45 ° C, and the amount of ratatisin Q and nisin Z remaining over time is measured by HPLC. analyzed.
  • survival rate (%) (bacteriocin amount after n days / bacteriocin amount on day 0 of experiment) x 100.
  • nisin Z was almost completely degraded by the fifth day after the start of the experiment, whereas ratathicin Q was 5% after 47 days in such neutral and alkaline regions. About 80% remained without being decomposed.
  • Crudely purified ratathicin Q and nisin Z were prepared using sterilized distilled water to 4200 units / ml each, and the pH was adjusted to 3-9 using N / 5 hydrochloric acid and N / 10 sodium hydroxide. It was adjusted. Samples were heat-treated at 90 ° C. for 30 minutes or 110 ° C. for 10 minutes, and the amounts of ratathicin Q and nisin Z remaining after the heat treatment were analyzed by HPLC.
  • survival rate (%) (bacteriocin amount after heat treatment Z amount of bacteriocin before heat treatment) ⁇ 100.
  • it showed higher thermal stability than Nisin Z in the neutral to alkaline range of pH7 and pH9.
  • nisin Z has a residual nisin Z content of about 10% in all samples 30 days after the start of storage, whereas ratathicin Q is about 50% in 50, 60% ethanol, 70% remained in 40% ethanol. From these results, it was shown that ratathicin Q is superior to nisin Z in stability in ethanol.
  • Nisin which is actually used as a food preservative overseas, is stable in acidity, but unstable in neutral and alkaline regions and has a property of being easily decomposed. Since the antibacterial peptide (latathicin Q) of the present invention is excellent in neutral and alkaline stability, the bacteriostatic effect of such foods can be expected. Rataticin Q is also excellent in ethanol stability and can be used as a material for ethanol-based antibacterial agents. Accordingly, the force S described below in further detail with reference to examples, and the present invention is not limited to these examples.
  • Nisin Z 1 ⁇ 1.5 The results are shown in Table 5. As a result, when ratathicin Q was added to the fried egg, which is a weak alkaline food, the number of viable bacteria could be reduced by about an order of magnitude compared to the case of adding nisin Z.
  • Ratatisine Q crude purified sample was added to 30% ethanol to a final concentration of 200 ⁇ g / ml.
  • the pH was adjusted to 3.5 using N / 5 hydrochloric acid.
  • the antibacterial activity was evaluated by bioassay using a 30% ethanol solution and 200 ⁇ g / ml ratathicin Q aqueous solution as controls.
  • To the prepared sample (200 ⁇ l) 20 ⁇ l of indicator medium culture solution (107 CFU / ml) was added and contacted for 1 minute. Thereafter, sample 1001 mixed with indicator bacteria was mixed with 100 ⁇ of SCDLP medium (manufactured by Eiken Kikai Co., Ltd.), and cultured at the optimum temperature for each indicator bacteria. After 24, 48 and 72 hours, the presence or absence of indicator bacteria was visually confirmed.
  • the indicator bacteria include Escherichia c oil, Staphylococcus epidermidis, and Listeria.
  • Ratathicin Q has an excellent antibacterial effect against Enterococcus bacteria, and is therefore expected to show antibacterial effects against nosocomial pathogens such as VRE and MRSA, and can be expected as an excellent antibacterial material.
  • the new strain of the present invention and the antibacterial peptide produced thereby can be used in many fields as a material for antibacterial agents for the purpose of food preservation and sterilization 'disinfection, and in particular, neutral and alkaline It is valid even if used in the domain.

Abstract

A novel antibacterial peptide (bacteriocin) having a primary structure composed of an amino acid sequence that is Met-Ala-Gly-Phe-Leu-Lys-Val-Val-Gln-Leu-Leu-Ala-Lys-Tyr-Gly-Ser-Lys-Ala-Val-Gln-Trp-Ala-Trp-Ala-Asn-Lys-Gly-Lys-Ile-Leu-Asp-Trp-Leu-Asn-Ala-Gly-Gln-Ala-Ile-Asp-Trp-Val-Val-Ser-Lys-Ile-Lys-Gln-Ile-Leu-Gly-Ile-Lys, which antibacterial peptide is preferred as an antibacterial agent for use in food storage, sterilization/disinfection, etc. effective even in neutral and alkali regions. The novel antibacterial peptide is produced by novel Lactococcus lactis strain QU1005 (NITE BP-23).

Description

明 細 書  Specification
抗菌性ペプチドおよび該ペプチドを産生する乳酸菌  Antibacterial peptide and lactic acid bacteria producing the peptide
技術分野  Technical field
[0001] 本発明は、新規な乳酸菌株と該菌株によって生産される新規な抗菌性ペプチドに 関する。  [0001] The present invention relates to a novel lactic acid strain and a novel antibacterial peptide produced by the strain.
背景技術  Background art
[0002] 乳酸菌が生産する抗菌物質としては、乳酸などの有機酸、過酸化水素、ジァセチ ル等の低分子がすでに知られている。その他、ペプチドからなる抗菌物質 (パクテリ ォシン)の存在も知られており、例えば、ラクトコッカス'ラクテイス(Lactococcus lactis) が生産するナイシン Α ϋ· Am. Chem. So 1971 Sep 8; 93(18): 4634-5)、ナイシン Z ( Eur. J.  [0002] As antibacterial substances produced by lactic acid bacteria, low molecular weight compounds such as organic acids such as lactic acid, hydrogen peroxide, and diacetyl are already known. In addition, the existence of antibacterial substances consisting of peptides (pacteriocins) is also known, for example nisin produced by Lactococcus lactis Α ϋ Am Am. Chem. So 1971 Sep 8; 93 (18): 4634-5), Nisin Z (Eur. J.
Biochem. 1991 Nov 1; 201(3): 581 - 4)などが挙げられている。ナイシンは乳酸菌由来 で、ヒトの消化酵素により分解される、安全性の高い抗菌物質として、欧米を中心に 広く食品保存剤として使用されている。しかし、ナイシンは酸性域では安定である力 中性、アルカリ性域では不安定であるため、食品保存剤として利用できる食品が酸性 、弱酸性のものに限られる。  Biochem. 1991 Nov 1; 201 (3): 581-4). Nisin is derived from lactic acid bacteria and is a highly safe antibacterial substance that is degraded by human digestive enzymes and is widely used as a food preservative mainly in Europe and the United States. However, since nisin is stable in the acidic range and neutral in the alkaline range and unstable in the alkaline range, foods that can be used as food preservatives are limited to those that are acidic or weakly acidic.
また医療分野では、抗生物質の多用による多剤耐性菌の出現により、 MRSAや VRE などの弱毒微生物による院内感染症が問題となってレ、る。現在は主にエタノール製 剤での殺菌'消毒が主であるが、高濃度のエタノールは手荒れの原因となり、その部 分からの感染や、付着細菌の伝播が懸念されるため、高濃度のエタノール製剤に代 わる殺菌 ·消毒薬が求められてレ、る。  In the medical field, nosocomial infections caused by attenuated microorganisms such as MRSA and VRE have become a problem due to the emergence of multidrug-resistant bacteria due to heavy use of antibiotics. At present, sterilization and disinfection with ethanol products are mainly used, but high concentrations of ethanol cause rough hands, and there is concern about infection from that part and the spread of adherent bacteria. Alternative sterilization · Disinfection is required.
非特許文献 1 :J. Am. Chem. Soc. 1971 Sep 8; 93(18): 4634-5  Non-Patent Document 1: J. Am. Chem. Soc. 1971 Sep 8; 93 (18): 4634-5
非特許文献 2 : Eur. J. Biochem. 1991 Nov 1; 201(3): 581-4  Non-Patent Document 2: Eur. J. Biochem. 1991 Nov 1; 201 (3): 581-4
発明の開示  Disclosure of the invention
発明が解決しょうとする課題  Problems to be solved by the invention
[0003] 本発明の目的は、従来から知られていない抗菌物質を生産し得る新規な乳酸菌を 見出し、中性やアルカリ性領域においても有効な、食品の保存や、殺菌'消毒等に [0003] An object of the present invention is to find a novel lactic acid bacterium that can produce an antibacterial substance that has not been known so far, and is effective in the preservation of food, sterilization and disinfection, etc., even in neutral and alkaline regions.
差替え i¾纖(規則 26) 有用な技術を提供することにある。 Replacement i¾ 纖 (Rule 26) It is to provide useful technology.
[0004] 本発明者は乳酸菌が生産する抗菌物質に着目し研究を重ねた結果、バチルス (Ba cillus)属、ミクロコッカス(Micrococcus)属、リステリア(Listeria)属、ぺディォコッカス( Pediococcus)属、ェンァロコッカス (Enterococcus)属、ラ外コッカス (Lactococcus)属 、ラクトバチルス(Lactobacillus)属、ロイコノストック(Leuconostoc)属に属する、食品 劣化の原因微生物に対して抗菌性を有する(すなわち、感受性グラム陽性細菌に対 する阻害活性を有する)物質を生産する新規な乳酸菌株ラタトコッカス'ラクテイス (La ctococcus lactis)を見出し、該抗菌性物質(ペプチド)の精製'同定、一次構造の解 明、および諸性質の解明を行うことにより、本発明を導き出した。  [0004] As a result of repeated researches focusing on antibacterial substances produced by lactic acid bacteria, the present inventor has found that the genus Bacillus, Micrococcus, Listeria, Pediococcus, and Enalococcus (Enterococcus), Lactococcus genus, Lactobacillus genus, Leuconostoc genus, which has antibacterial properties against microorganisms that cause food degradation (ie, sensitive gram-positive bacteria) A new lactic acid strain, Latococcus lactis, that produces a substance that has an inhibitory activity against it, identified the antibacterial substance (peptide), identified its primary structure, and elucidated its properties Thus, the present invention was derived.
力べして、本発明は、下記のアミノ酸配列(配列番号 1)からなる一次構造を有する 抗菌性ペプチドを提供するものである。なお、 N末端のメチォニンはホルミル化され ている。  In essence, the present invention provides an antimicrobial peptide having a primary structure consisting of the following amino acid sequence (SEQ ID NO: 1). The N-terminal methionine is formylated.
[0005] [化 1] 配列番号 1  [0005] [Chemical 1] SEQ ID NO: 1
N末端より n番目のアミノ酸名  Nth amino acid from the N-terminal
Figure imgf000003_0001
Figure imgf000003_0001
[0006] さらに、本発明に従えば、上記の抗菌性ペプチドを生産するラタトコッカス 'ラタティ ス(Lactococcus lactis)新規菌株、すなわち QU 1005菌株(受託番号: MTE BP-23) が提供される。 [0006] Further, according to the present invention, there is provided a novel strain of Lactococcus lactis, that is, the QU 1005 strain (accession number: MTE BP-23), which produces the above-mentioned antibacterial peptide.
発明の効果  The invention's effect
[0007] 本発明に従えば、食品保存や抗菌'消毒などの目的に有用な抗菌剤の素材として 好適な抗菌性ペプチドが提供される。  [0007] According to the present invention, an antibacterial peptide suitable as a material for an antibacterial agent useful for food preservation, antibacterial 'disinfection and the like is provided.
図面の簡単な説明 [0008] [図 1]本発明の抗菌性ペプチド (ラタティシン Q)をナイシン Zと比較した pH安定性試 験の結果を示す。 Brief Description of Drawings [0008] FIG. 1 shows the results of a pH stability test in which the antibacterial peptide of the present invention (latathicin Q) was compared with nisin Z.
[図 2]本発明の抗菌性ペプチド (ラタティシン Q)をナイシン Zと比較した熱安定性試験 の結果を示す。  FIG. 2 shows the results of a thermal stability test comparing the antibacterial peptide of the present invention (latathicin Q) with nisin Z.
[図 3]本発明の抗菌性ペプチド (ラタティシン Q)をナイシン Zと比較したエタノール安 定性試験の結果を示す。  FIG. 3 shows the results of an ethanol stability test in which the antimicrobial peptide (latathicin Q) of the present invention was compared with nisin Z.
発明を実施するための最良の形態  BEST MODE FOR CARRYING OUT THE INVENTION
[0009] 本発明によって得られる抗菌性物質は、熊本県阿蘇巿産のトウモロコシから分離さ れたラタトコッカス 'ラタティス菌株によって生産される新規なペプチド (バタテリオシン )であり、従来知られているナイシンやラタトコッシンなどとは異なるアミノ酸配列から構 成される新しレ、タイプのバクテリオシン類と考えられる。  [0009] The antibacterial substance obtained by the present invention is a novel peptide (batteriocin) produced by a ratatococcus' latatis strain isolated from corn produced in Aso, Kumamoto Prefecture. It is considered to be a new type of bacteriocin composed of an amino acid sequence different from that of ratatocossin.
以下、新規菌株の単離やその特性分析、該菌株からの抗菌性ペプチドの生産や 精製、コードする DNAの配列の決定、および該ペプチドの諸性質の解明などに沿つ て本発明の実施の形態を詳細に説明する。  Hereinafter, the implementation of the present invention will be carried out along with the isolation and characterization of a novel strain, the production and purification of antibacterial peptides from the strain, the determination of the sequence of the encoded DNA, and the elucidation of the properties of the peptide. A form is demonstrated in detail.
[0010] (1)乳酸菌の単離方法  [0010] (1) Isolation method of lactic acid bacteria
乳酸菌の天然野生株を取得するために、様々な食材を分離源として、乳酸菌選択 性の高い MRS培地(OXOID社製)や M17 (MERCK社製)培地、または滅菌蒸留水を 用いて集積培養を行った。集積培養液から分離した菌を用いて抗菌活性を指標とし たスクリーニングを行った。すなわち、 MRS寒天培地にコロニーを増殖させた後、指標 菌となる各種グラム陽性細菌(上記の食品劣化の原因微生物)の培養液を混釈した 軟寒天培地を重層し、至適温度にて培養後、コロニー周辺に形成される指標菌の増 殖阻止円が観察された菌株を単離した。  In order to obtain natural wild strains of lactic acid bacteria, various foods are used as the separation source, and MRS medium (manufactured by OXOID), M17 (manufactured by MERCK) medium with high selectivity for lactic acid bacteria, or sterilized distilled water is used for enrichment culture. went. Screening using antibacterial activity as an index was performed using bacteria isolated from the enrichment culture. That is, after growing colonies on the MRS agar medium, overlay the soft agar medium mixed with the culture solution of various gram-positive bacteria (the above-mentioned microorganisms causing food deterioration) as the indicator bacteria, and culture at the optimum temperature. Thereafter, a strain in which a growth inhibition circle of indicator bacteria formed around the colony was observed was isolated.
[0011] (2)分離菌株の性晳分析  [0011] (2) Sexuality analysis of isolates
スクリーニングの結果、優れた抗菌性を有する菌株を発見した。本菌株は、熊本県 阿蘇巿にて収穫されたトウモロコシから分離されたものである。グラム染色、カタラー ゼ活性試験、運動性試験、細胞の形態観察、糖類発酵性試験、生産乳酸量、生産 乳酸旋光性、グルコースからのガス発生テストについて調査した。菌株の特性は、通 性嫌気性、グラム陽性、カタラーゼ陰性、運動性なし、細胞の形態は楕円双球菌、ホ モ型発酵性菌であった。また、 49種類の糖類発酵性テスト (APIシステム)を行った結 果、本菌株は表 1に示される糖類発酵性を示した。この結果より、本菌株をラタトコッ カス'ラクテイス(Lactococcus lactis)であると同定し、これを Lactococcus lactis QU 10 05菌株と命名した。本 QU As a result of screening, a strain having excellent antibacterial properties was discovered. This strain was isolated from corn harvested at Aso Pass in Kumamoto Prefecture. Gram staining, catalase activity test, motility test, cell morphology observation, sugar fermentation test, production lactic acid content, production lactic acid rotation, and gas generation test from glucose were investigated. The characteristics of the strain are facultative anaerobic, gram positive, catalase negative, no motility, cell morphology is S. aureus, It was a fermentative fungus. In addition, as a result of 49 kinds of sugar fermentability tests (API system), this strain showed the sugar fermentability shown in Table 1. From this result, this strain was identified as Lactococcus lactis, and named Lactococcus lactis QU 10 05 strain. This QU
1005菌株は特許微生物寄託センターに寄託しており、受託番号は NITE BP-23 (原 寄託曰 2004年 9月 15曰)である。  The 1005 strain has been deposited with the Patent Microorganism Depositary, and the deposit number is NITE BP-23 (Hara Depositary 15 September 2004).
[表 1] [table 1]
QU 1005菌株の糖類発酵性 Sugar fermentation of QU 1005 strain
Figure imgf000005_0001
Figure imgf000005_0001
16S rDNAシーケンス解析による菌株の同定 Identification of strains by 16S rDNA sequencing analysis
現在、微生物の系統分類の指標として最も広く用いられている方法が 16S rRNAを コードする遺伝子の塩基配列(16S rDNA)である。 QU 1005の系統分類学的位置を 明確にするために 16S rRNAをコードする遺伝子の塩基配列(16S rDNA)を決定し、 データベースによる相同性検索を行った。すなわち、 i6S rDNAの約 1.5 kbpのうち上 流部分の約 500bpにつレ、て検討を行った。 Currently, the most widely used method as an index for phylogenetic classification of microorganisms is the base sequence (16S rDNA) of the gene encoding 16S rRNA. In order to clarify the phylogenetic position of QU 1005, the base sequence (16S rDNA) of the gene encoding 16S rRNA was determined, and homology search was performed using a database. That is, the i 6S rDNA was examined for about 500 bp in the upstream portion of about 1.5 kbp.
QU 1005菌株の培養液より MagExtractor Kit -Genome- (TOYOBO社製)を用いて 全ゲノム DNAを抽出した。これを铸型として配列番号 Aに示すプライマーを用いて、 ポリメラーゼ連鎖反応により単一な増幅断片を得た。その後、増幅断片を pGEM-T cl oning vector (プロメガ社製)にライゲーシヨンし、このライゲーシヨン産物を用いて、ヒ ートショック法により E. coli JM109を形質転換した。形質転換体を LB培地で 8時間培 養後、 MagExtractor- Plasmid (TOYOBO社製)を用レ、、プラスミドを抽出した。このプ ラスミドをシーケンス反応の铸型とした。シーケンス反応には Thermo Sequence fluore scent labeled primer cycle Using MagExtractor Kit -Genome- (TOYOBO) from the culture solution of QU 1005 strain Total genomic DNA was extracted. A single amplified fragment was obtained by polymerase chain reaction using the primer shown in SEQ ID NO: A as a saddle type. Thereafter, the amplified fragment was ligated to pGEM-T cloning vector (Promega), and E. coli JM109 was transformed by the heat shock method using this ligation product. The transformant was cultured in LB medium for 8 hours, and then the plasmid was extracted using MagExtractor- Plasmid (manufactured by TOYOBO). This plasmid was used as a type of sequence reaction. Thermo Sequence fluore scent labeled primer cycle for sequencing reactions
sequencing kit (フアルマシア社製)を使用した。  A sequencing kit (manufactured by Falmasia) was used.
結果として、配列番号 Bの塩基配列(ヌクレオチド配歹 IJ)が得られた。配列番号 Bの 塩基配列のデータベースによる相同性検索を行った結果、 Lactococcus lactisと 100% の相同†生を示した。  As a result, the base sequence of SEQ ID NO: B (nucleotide alignment IJ) was obtained. As a result of homology search using the nucleotide sequence database of SEQ ID NO: B, it showed 100% homology with Lactococcus lactis.
[0014] [化 2] 配列番号 Λ [0014] [Chemical 2] SEQ ID NO: Λ
8A 5'-AGA-GTT-TGA-TCC-TGG-CTC-AG-3' (20 mer) Tm = 5S.3°C  8A 5'-AGA-GTT-TGA-TCC-TGG-CTC-AG-3 '(20 mer) Tm = 5S. 3 ° C
1510R 5' -ATT ACC GC(C/G) GCT GCT G-3' (16 mer) Tm = 55,2°C  1510R 5 '-ATT ACC GC (C / G) GCT GCT G-3' (16 mer) Tm = 55,2 ° C
[0015] [化 3] [0015] [Chemical 3]
配列番号 B SEQ ID NO: B
Query : QU 1005. Subject : Lactococcus I act is subsp. lactis  Query: QU 1005. Subject: Lactococcus I act is subsp. Lactis
I dent i t i es = 540/540 (100%) , Gaps = 0/540 (0%)  I dent i t i es = 540/540 (100%), Gaps = 0/540 (0%)
Query I GAGCGCTGAAGGTTGGTACTTGTACCAACTGGATGAGCAQCQAACGQGTaAGTAACGCGT 60  Query I GAGCGCTGAAGGTTGGTACTTGTACCAACTGGATGAGCAQCQAACGQGTaAGTAACGCGT 60
Sbjct 35 GAGCGCTGAAG6TT66TACTTQTACCAACTGGATGAGCAGCGAACGGGTGA6TAACGCGT 94  Sbjct 35 GAGCGCTGAAG6TT66TACTTQTACCAACTGGATGAGCAGCGAACGGGTGA6TAACGCGT 94
Query 61 GGGGAATCTGCCTTTGAGCGGGGGACAACATTTGGAAACGAATGCTAATACCGCATAAAA 120  Query 61 GGGGAATCTGCCTTTGAGCGGGGGACAACATTTGGAAACGAATGCTAATACCGCATAAAA 120
Sbjct 95 GGGGAATCTGCCTTTGAGCGGGGGACAACATTTGGAAACGAATGCTAATACCGCATAAAA 154  Sbjct 95 GGGGAATCTGCCTTTGAGCGGGGGACAACATTTGGAAACGAATGCTAATACCGCATAAAA 154
Query 121 ACTTTAAACACAAGTTTTAAGTTTQAAAGAT6CAATTGCATCACTCAAAGATGATCCCGC 180  Query 121 ACTTTAAACACAAGTTTTAAGTTTQAAAGAT6CAATTGCATCACTCAAAGATGATCCCGC 180
Sbjct 155 ACTTTAAACACAAGTTTTAAGTTTGAAAGATGCAATTGCATCACTCAAAGAT6ATCCCQC 214  Sbjct 155 ACTTTAAACACAAGTTTTAAGTTTGAAAGATGCAATTGCATCACTCAAAGAT6ATCCCQC 214
Quer 181 GTTGTA丌 AGCTAGTTGGTGAGGTAAAGGCTCAGCAAGGGGATGATACATAGCCGACGTG 240  Quer 181 GTTGTA 丌 AGCTAGTTGGTGAGGTAAAGGCTCAGCAAGGGGATGATACATAGCCGACGTG 240
Sbjct 215 GTTGTATTAGCTAGTTGGTGAQGTAAAGGCTCACCAAGGCGATGATACATAGCCGACCTG 274  Sbjct 215 GTTGTATTAGCTAGTTGGTGAQGTAAAGGCTCACCAAGGCGATGATACATAGCCGACCTG 274
Query 241 AGAGG6TGATCGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACQ6GA66CA6CAG 300  Query 241 AGAGG6TGATCGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACQ6GA66CA6CAG 300
Sbjct 275 AGAGGGTGATCGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAaGCAGCAG 334  Sbjct 275 AGAGGGTGATCGGCCACATTGGGACTGAGACACGGCCCAAACTCCTACGGGAaGCAGCAG 334
Query 301 TAQ6GAATCTTCGGCAATGGACGAAAGTCTGACCGAGCAACGCCGCGTGAGTGAAGAAGG 360  Query 301 TAQ6GAATCTTCGGCAATGGACGAAAGTCTGACCGAGCAACGCCGCGTGAGTGAAGAAGG 360
Sbjct 335 TAGGGAATCTTCGGCAAT6GACGAAAGTCTGACCGAGCAACGCCGCGTGAGTGAAGAAGG 394  Sbjct 335 TAGGGAATCTTCGGCAAT6GACGAAAGTCTGACCGAGCAACGCCGCGTGAGTGAAGAAGG 394
Query 361 TTTTCGGATCGTAAAACTCTQTTGGTAQAGAA6AACGTTGGTGAGAGTGGAAAQCTCATC 420  Query 361 TTTTCGGATCGTAAAACTCTQTTGGTAQAGAA6AACGTTGGTGAGAGTGGAAAQCTCATC 420
Sbjct 395 TTTTC6GATCGTAAAACTCTGTTGGTAGAGAAGAACGTTGQTGAGAGTGGAAAGCTCATC 454  Sbjct 395 TTTTC6GATCGTAAAACTCTGTTGGTAGAGAAGAACGTTGQTGAGAGTGGAAAGCTCATC 454
Query 421 AAGTGACGGTAACTACCCAGAAAGGGACGGCTAACTACGTGCCAGCAGCCGCGGTAATAC 480  Query 421 AAGTGACGGTAACTACCCAGAAAGGGACGGCTAACTACGTGCCAGCAGCCGCGGTAATAC 480
Sbjct 455 AAGTGACGGTAACTACCCAGAAAGGGACGGCTAACTAC6TQCCAGCA6CC6CG6TAATAC 514  Sbjct 455 AAGTGACGGTAACTACCCAGAAAGGGACGGCTAACTAC6TQCCAGCA6CC6CG6TAATAC 514
Query 481 GTAGGTCCCGAGCGTTGTGCGGATTTATTGGGCGTAAAGCGAGCGCAGGTGGTTTATTAA 540  Query 481 GTAGGTCCCGAGCGTTGTGCGGATTTATTGGGCGTAAAGCGAGCGCAGGTGGTTTATTAA 540
Sbjct 515 GTAGGTCCCGAGCQTTGTCCGGATTTATT66GCGTAAAGCGAGCGCAGGT6GTTTATTAA 574  Sbjct 515 GTAGGTCCCGAGCQTTGTCCGGATTTATT66GCGTAAAGCGAGCGCAGGT6GTTTATTAA 574
QU 1005とム lactisの 16S rDNA配列比較 (3)抗菌活件試験  16S rDNA sequence comparison between QU 1005 and muc lactis (3) Antibacterial activity test
QU 1005菌株により抗菌物質が液体培地中に生産されているか検討するため、 MR S液体培地にて 18時間培養後、遠心分離を行って得た培養液上清を回収した。 1M NaOHを用いて pHを 6に調整した後、濾過滅菌したものを試験サンプノレとした。試験 サンプルを 2倍段階希釈し、抗菌活性試験に用いた。指標菌を混釈した軟寒天培地 上に試験サンプルの段階希釈液を 10 μ 1滴下した。抗菌活性は輪郭の明瞭な増殖阻 止円が観察された最大希釈倍率を Xとし、 X X 1000/10 (A.U./ml)として算出した。こ の結果、 QU 1005菌株の培養液上清は表 2に示される抗菌スペクトルを示した。 QU 1005菌株によって生産される抗菌物質 (抗菌性ペプチド)をここではラタティシン Qと 称する。 In order to investigate whether antibacterial substances were produced in the liquid medium by the QU 1005 strain, the culture supernatant obtained by centrifuging was collected after culturing in the MRS liquid medium for 18 hours. The pH was adjusted to 6 using 1M NaOH and then sterilized by filtration as a test sample. Test samples were diluted 2-fold and used for antibacterial activity tests. 10 μl of a serial dilution of the test sample was dropped on a soft agar medium containing the indicator bacteria. Antibacterial activity was calculated as XX 1000/10 (AU / ml), where X is the maximum dilution factor at which a well-defined growth-inhibiting circle was observed. As a result, the culture supernatant of the QU 1005 strain showed the antibacterial spectrum shown in Table 2. Antibacterial substances (antibacterial peptides) produced by the QU 1005 strain Called.
[0017] [表 2] U 1005菌株培養液上清の抗菌スぺク トル  [0017] [Table 2] Antibacterial spectrum of culture supernatant of U 1005 strain
Figure imgf000008_0001
Figure imgf000008_0001
[0018] (4)抗菌物質の生産および精製方法 [0018] (4) Production and purification method of antibacterial substance
分離株 QU 1005菌株を MRS培地にて前培養し、前培養液 8mlを 250mlの MRS培地 に植菌した。 30°Cで 12時間静置培養を行い、 6000rpmで遠心分離後、上清を回収し た。培養液上清(200ml)の指標菌 Bacillus coagulans JCM 2257τに対する活性は、 2. 56 X 106 (A.U./ml)であった。培養液上清に対して 3倍量(600ml)の冷却アセトンを添 加し、 1時間 30°Cで冷却した後、 6000rpmで遠心分離し、抗菌物質を沈殿回収した 。回収した沈殿物を 20mMのリン酸ナトリウムバッファー(pH 5.7) 100mlに再溶解した。 Isolate QU 1005 was precultured in MRS medium, and 8 ml of the preculture was inoculated into 250 ml of MRS medium. After stationary culture at 30 ° C for 12 hours, the supernatant was collected after centrifugation at 6000 rpm. The activity of the culture supernatant (200 ml) against the indicator bacterium Bacillus coagulans JCM 2257 τ was 2.56 × 10 6 (AU / ml). Three times (600 ml) of chilled acetone was added to the culture supernatant, cooled at 30 ° C. for 1 hour, and then centrifuged at 6000 rpm to precipitate and collect antibacterial substances. The collected precipitate was redissolved in 100 ml of 20 mM sodium phosphate buffer (pH 5.7).
SP-セファロース陽イオン交換樹脂(フアルマシア社製)を 16mlをカラムに充填し、再 溶解したサンプル 100mlを添カ卩し、リン酸ナトリウムバッファーでカラムを平衡化した。 流速 2ml/分で 0.25、 0.5、 0.75, l .OM NaCl含有リン酸ナトリウムバッファー(各 40ml)を 用レ、て段階的に分画溶出した。  The column was filled with 16 ml of SP-Sepharose cation exchange resin (manufactured by Pharmacia), 100 ml of redissolved sample was added, and the column was equilibrated with sodium phosphate buffer. Sodium phosphate buffer (40 ml each) containing 0.25, 0.5, 0.75, l.OM NaCl was applied at a flow rate of 2 ml / minute, and fractional elution was performed stepwise.
それぞれの溶出画分の抗菌活性を測定した結果、最も活性の強かった 0.25M NaC 1溶出画分の活性は 2.05 X 106 (A.U./ml)であった。 0.25M NaCl溶出液(40ml)を逆相 HPLC (カラム:フアルマシア社製 RESOURCE RPC 3ml)に供した。移動相には、 0.1% トリフルォロ酢酸含有 MilliQ水を用レ、、ァセトニトリルの直線的濃度勾配(グラジェント 20〜80%)、流速 lml/分、 1画分あたり lmlで 30分画した。検出器には紫外可視分光 光度計 (波長 220、 280nm)を使用した。 30の分画サンプルの抗菌活性を測定し、活 性の強かった画分を取得した。 As a result of measuring the antibacterial activity of each eluted fraction, the activity of the 0.25M NaC1 eluted fraction, which had the strongest activity, was 2.05 × 10 6 (AU / ml). The 0.25M NaCl eluate (40 ml) was subjected to reverse phase HPLC (column: RESOURCE RPC 3 ml manufactured by Falumasia). As the mobile phase, MilliQ water containing 0.1% trifluoroacetic acid was used, and linear concentration gradient of acetonitrile (gradient 20 to 80%), flow rate of 1 ml / min, and fractionation at 30 ml at 1 ml per fraction. A UV-visible spectrophotometer (wavelength 220, 280 nm) was used as the detector. Measure the antibacterial activity of 30 fraction samples and A strong fraction was obtained.
このようにして得られた精製後の抗菌物質は表 3に示される抗菌スペクトルを示した 。既知のバクテリオシンであるナイシン Aと比較すると、ラタティシン Qは Enteroocccus 属に対して高レ、抗菌活性 (小さレ、MIC (最小生育阻止濃度)値)が認められた。  The purified antibacterial substance thus obtained exhibited the antibacterial spectrum shown in Table 3. Compared with nisin A, a known bacteriocin, ratathicin Q showed higher levels and antibacterial activity (small level, MIC (minimum growth inhibitory concentration) value) against Enteroocccus genus.
[表 3] ラクティシン Qとナイシン Aの抗菌スぺク トルの比較  [Table 3] Comparison of antibacterial spectra of lactisin Q and nisin A
Figure imgf000009_0001
Figure imgf000009_0001
[0020] (5) ESI-TOF MS分析 [0020] (5) ESI-TOF MS analysis
上記のようにして精製した抗菌物質について、エレクトロスプレー飛行時間型質量 分析計 (ESI-TOF MS、 日本電子社製)を用いて質量分析を行った。その結果、ラタ ティシン Qは質量 5926の物質であることが明ら力となった。  The antibacterial substance purified as described above was subjected to mass spectrometry using an electrospray time-of-flight mass spectrometer (ESI-TOF MS, manufactured by JEOL Ltd.). As a result, it became clear that Ratathisin Q is a mass of 5926.
[0021] (6) N末端アミノ酸配列解析  [0021] (6) N-terminal amino acid sequence analysis
上記のようにして精製した抗菌物質について、エドマン分解法を利用したアミノ酸シ 一ケンサ一を用い、 N末端のアミノ酸分析を行った。結果として、エドマン分解は進行 せず、アミノ酸の配列を得ることは出来なかった。  The antibacterial substance purified as described above was subjected to N-terminal amino acid analysis using an amino acid sequencer utilizing Edman degradation. As a result, Edman degradation did not proceed and the amino acid sequence could not be obtained.
[0022] (7)抗菌性ペプチドの臭化シアン処理  [0022] (7) Cyanogen bromide treatment of antibacterial peptides
上記(6)にてエドマン分解が進行しなかったため、抗菌性ペプチドの N末端のメチ ォニン残基を切断する目的で、臭化シアン処理を行レ、、逆相 HPLCにより再度精製を 行った。精製したペプチドの質量分析を行った結果、 5767の実測値が得られた。臭 化シアン処理前後での質量の差である 159はホルミルメチォニンの質量と一致してい た。この結果より抗菌性ペプチドの N末端はホルミルメチォニンによりブロックされて おり、そのためエドマン分解が進行しなかったことが示された。 また、臭化シアン処理で得られたペプチドの N末端アミノ酸分析を上記と同様の方 法で行った。結果として配列番号 2に示す、ペプチドの N末端より 50のアミノ酸残基が 明らかとなった。得られたアミノ酸配歹 IJから推定される抗菌性ペプチドの質量を算出 した結果、上記(5)の質量と一致しなかったことから、得られたアミノ酸配列が不十分 であることが示唆された。 Since Edman degradation did not proceed in (6) above, for the purpose of cleaving the N-terminal methionine residue of the antibacterial peptide, it was treated with cyanogen bromide and purified again by reverse phase HPLC. As a result of mass spectrometry of the purified peptide, an actual measurement value of 5767 was obtained. 159, the difference in mass before and after cyanogen bromide treatment, was consistent with the mass of formylmethionine. From this result, it was shown that the N-terminus of the antibacterial peptide was blocked by formylmethionine, so that Edman degradation did not proceed. In addition, N-terminal amino acid analysis of the peptide obtained by cyanogen bromide treatment was performed in the same manner as described above. As a result, 50 amino acid residues were revealed from the N-terminus of the peptide shown in SEQ ID NO: 2. As a result of calculating the mass of the antibacterial peptide deduced from the obtained amino acid sequence IJ, it was not consistent with the mass of the above (5), suggesting that the obtained amino acid sequence was insufficient. .
[化 4]  [Chemical 4]
配列番号 2  SEQ ID NO: 2
Figure imgf000010_0001
Figure imgf000010_0001
[0024] (8)抗菌性ペプチドの構造遺伝子の決定 [0024] (8) Determination of structural gene of antibacterial peptide
上記のようにして得られた抗菌性ペプチドのアミノ酸配列の一部より、ディジヱネレ ートプライマーを構築し、ポリメラーゼ連鎖反応(PCR)により抗菌ペプチドの構造遺 伝子の取得を行った。 QU 1005菌株力 全ゲノム DNAを CTAB法により抽出し、これ を铸型として PCRに用いた。ネステイツド PCR法により単一な増幅断片を得た。  A digitate primer was constructed from a part of the amino acid sequence of the antibacterial peptide obtained as described above, and the structural gene of the antibacterial peptide was obtained by polymerase chain reaction (PCR). QU 1005 strain power Whole genomic DNA was extracted by CTAB method and used as PCR in PCR. A single amplified fragment was obtained by the nested PCR method.
その後、増幅断片を pGEM- T cloning vector (プロメガ社製)にライゲーシヨンし、こ のライゲーシヨン産物を用いて、ヒートショック法により E. coli JM109を形質転換した。 形質転換体を LB培地で 8時間培養後、 MagExtractor-Plasmid (TOYOBO社製)を用 レ、、プラスミドを抽出した。このプラスミドをシーケンス反応の铸型とした。シーケンス 反 i¾、に ίま Thermo Sequence fluorescent labeled primer cycle  Thereafter, the amplified fragment was ligated into pGEM-T cloning vector (Promega), and E. coli JM109 was transformed by the heat shock method using this ligation product. After transformants were cultured in LB medium for 8 hours, the plasmid was extracted using MagExtractor-Plasmid (manufactured by TOYOBO). This plasmid was used as a type of sequencing reaction. Thermo Sequence fluorescent labeled primer cycle
sequencing kit (フアルマシア社製)を使用した。  A sequencing kit (manufactured by Falmasia) was used.
結果として、配列番号 3の塩基配列 (ヌクレオチド配歹 が得られた。得られた塩基 配列を転換して得られるアミノ酸配列は、配列番号 2の 10〜39残基目の配列と一致し ていた。  As a result, the nucleotide sequence of SEQ ID NO: 3 (nucleotide arrangement was obtained. The amino acid sequence obtained by converting the obtained nucleotide sequence was identical to the sequence of residues 10 to 39 of SEQ ID NO: 2. .
[0025] [化 5] 配列番号 3 [0025] [Chemical 5] SEQ ID NO: 3
Figure imgf000011_0001
Figure imgf000011_0001
[0026] さらに、ここで得られた塩基配列をもとに新たなプライマーを構築し、抗菌性べプチ ドの C末端部分をコードする塩基配列の取得をアンカー PCR法により行った。すなわ ち、 QU 1005菌株の全ゲノム DNAを制限酵素で消化し、同様に MCS (マルチクロー二 ングサイト)を制限酵素処理した PUC18 cloning vectorにランダムにライゲーシヨンし た。このようにして得られたライゲーシヨン産物を用いてネステイツド PCR法により単一 の増幅断片を得た。得られた PCR増幅断片を上記と同様の方法で、 E. coli JM109に 形質転換し、シーケンス解析を行った。 [0026] Furthermore, a new primer was constructed based on the base sequence obtained here, and the base sequence encoding the C-terminal portion of the antibacterial peptide was obtained by anchor PCR. In other words, the whole genomic DNA of the QU 1005 strain was digested with restriction enzymes and ligated randomly to a PUC18 cloning vector in which MCS (multicloning site) was similarly treated with restriction enzymes. A single amplified fragment was obtained by the nested PCR method using the ligation product thus obtained. The obtained PCR amplified fragment was transformed into E. coli JM109 by the same method as described above, and sequence analysis was performed.
結果として、配列番号 4の塩基配列が得られた。得られた塩基配列を転換して得ら れるアミノ酸配列は、配列番号 2の 36〜50残基目の配列と一致していた。また、配列 番号 2の 50番目のグリシン残基の後にイソロイシンとリジン残基の存在が確認され、そ の後にストップコドンが確認された。  As a result, the base sequence of SEQ ID NO: 4 was obtained. The amino acid sequence obtained by converting the obtained base sequence was consistent with the sequence of residues 36 to 50 of SEQ ID NO: 2. In addition, the presence of isoleucine and lysine residues was confirmed after the 50th glycine residue of SEQ ID NO: 2, followed by a stop codon.
[0027] [化 6]  [0027] [Chemical 6]
配列番号 4
Figure imgf000011_0002
SEQ ID NO: 4
Figure imgf000011_0002
[0028] このようにして得られたアミノ酸塩基配列から推定される抗菌物質の分子量の理論 値を算出(配列番号 1の 1残基目のメチォニンをホルミルメチォニンとして算出)したと ころ、 5926となり、この理論値が(5)で得られた実測値と一致したことから、この抗菌 物質が配列番号 1で示される 53アミノ酸残基からなるペプチドであることが明らかとな つた。 [0028] The theoretical value of the molecular weight of the antibacterial substance deduced from the amino acid base sequence thus obtained was calculated (the methionine of the first residue in SEQ ID NO: 1 was calculated as formylmethionine). Thus, since this theoretical value coincided with the actually measured value obtained in (5), it was revealed that this antibacterial substance was a peptide consisting of 53 amino acid residues represented by SEQ ID NO: 1.
[0029] (9)抗菌性ペプチドの諸性質の解明  [0029] (9) Elucidation of various properties of antibacterial peptides
(抗菌物質の生産および試験用サンプノレの調製方法) 分離株 QU 1005菌株および、ナイシン Z生産菌株をグルコース、酵母エキス、炭酸 カルシウムを含む基本培地にて培養した。培養液を遠心分離後、得られた培養液上 清より、合成吸着剤を用いて、ラタティシン Qおよびナイシン Zを粗精製した。得られた 粗精製サンプルを用いて以下の試験を行った。なお、 HPLC分析において、ナイシン 1ユニット(精製ナイシン 25ng)と同じピークエリアを示す量を各バクテリオシンの 1ュニ ットとした。 (Production of antibacterial substances and preparation of sampnore for testing) The isolate QU 1005 strain and nisin Z-producing strain were cultured in a basic medium containing glucose, yeast extract and calcium carbonate. After centrifuging the culture solution, rataticin Q and nisin Z were roughly purified from the obtained culture solution supernatant using a synthetic adsorbent. The following tests were performed using the obtained roughly purified sample. In HPLC analysis, the amount showing the same peak area as 1 unit of nisin (25 ng of purified nisin) was defined as one unit of each bacteriocin.
[0030] ϋΗ安定性試験 [0030] ϋΗ Stability Test
粗精製したラタティシン Qとナイシン Ζを、それぞれ 4200ユニット/ mlとなるように滅菌 蒸留水を用いて調製した。 N/5の塩酸、 N/10の水酸化ナトリウムを用いて pHを 3〜9 に調整したサンプノレを 45°Cで保存し、経時的に残存するラタティシン Qおよびナイシ ン Zの量を HPLCにて分析した。  Crudely purified ratathicin Q and nisin koji were prepared using sterile distilled water at 4200 units / ml, respectively. Sampnole adjusted to pH 3-9 with N / 5 hydrochloric acid and N / 10 sodium hydroxide is stored at 45 ° C, and the amount of ratatisin Q and nisin Z remaining over time is measured by HPLC. analyzed.
結果を図 1に示す。図 1中、残存率は、残存率(%) = (n日経過後のバクテリオシン 量/実験開始日(0日目)のバクテリオシン量) X 100として求めたものである。結果と して、 pH7、 pH9において、ナイシン Zは実験開始後 5日目までにほぼ全てが分解され ていたのに対し、ラタティシン Qは、そのような中性およびアルカリ性領域において 47 日経過後でも 5〜8割程度が分解されずに残存していた。  The results are shown in Figure 1. In Fig. 1, the survival rate is determined as survival rate (%) = (bacteriocin amount after n days / bacteriocin amount on day 0 of experiment) x 100. As a result, at pH7 and pH9, nisin Z was almost completely degraded by the fifth day after the start of the experiment, whereas ratathicin Q was 5% after 47 days in such neutral and alkaline regions. About 80% remained without being decomposed.
[0031] 熱安定性試験 [0031] Thermal stability test
粗精製したラタティシン Qとナイシン Zを、それぞれ 4200ユニット/ mlとなるように滅菌 蒸留水を用いて調製し、 N/5の塩酸、 N/10の水酸化ナトリウムを用いて pHを 3〜9に 調整した。サンプルを 90°C 30分間、あるいは 110°C 10分間で加熱処理し、加熱処理 後に残存するラタティシン Qおよびナイシン Zの量を HPLCにて分析した。  Crudely purified ratathicin Q and nisin Z were prepared using sterilized distilled water to 4200 units / ml each, and the pH was adjusted to 3-9 using N / 5 hydrochloric acid and N / 10 sodium hydroxide. It was adjusted. Samples were heat-treated at 90 ° C. for 30 minutes or 110 ° C. for 10 minutes, and the amounts of ratathicin Q and nisin Z remaining after the heat treatment were analyzed by HPLC.
結果を図 2に示す。図 2中、残存率は、残存率(%) = (加熱処理後のバクテリオシン 量 Z加熱処理前のバクテリオシン量) X 100として求めたものである。結果として、 pH7 、 pH9の中性〜アルカリ性域においてナイシン Zよりも高い熱安定性を示した。  The result is shown in figure 2. In FIG. 2, the survival rate is determined as survival rate (%) = (bacteriocin amount after heat treatment Z amount of bacteriocin before heat treatment) × 100. As a result, it showed higher thermal stability than Nisin Z in the neutral to alkaline range of pH7 and pH9.
[0032] エタノール安定性試験 [0032] Ethanol stability test
ラタティシン Qおよびナイシン Zの粗精製物を 40%、 50%、 60%のエタノール溶液にそ れぞれ 4200ユニット/ mlとなるように添加した。 N/10の水酸化ナトリウムを用いて pH5 に調整した各サンプノレを 45°Cで保存し、経時的に残存するラタティシン Qおよびナイ シン Zの量を HPLCにて分析した。 Crude purified products of ratathicin Q and nisin Z were added to 40%, 50% and 60% ethanol solutions to 4200 units / ml, respectively. Each sampnole adjusted to pH 5 with N / 10 sodium hydroxide is stored at 45 ° C, and ratatisin Q and The amount of syn-Z was analyzed by HPLC.
結果を図 3に示す。図 3中、残存率は、残存率(%) = (n日経過後のバクテリオシン 量 Z実験開始日(0日目)のバクテリオシン量) X 100として求めたものである。結果と して、ナイシン Zは保存開始 30日後に、すべてのサンプルで残存するナイシン Z量が 10%程度となっているのに対して、ラタティシン Qは 50、 60%エタノール中で 50%程度、 40%のエタノール中では 70%が残存していた。この結果より、ラタティシン Qはナイシン Zに比べ、エタノール中での安定性に優れていることが示された。  The results are shown in Figure 3. In Fig. 3, the survival rate is obtained as survival rate (%) = (bacteriocin amount after n days elapse z bacteriocin amount on the start date of experiment (day 0)) x 100. As a result, nisin Z has a residual nisin Z content of about 10% in all samples 30 days after the start of storage, whereas ratathicin Q is about 50% in 50, 60% ethanol, 70% remained in 40% ethanol. From these results, it was shown that ratathicin Q is superior to nisin Z in stability in ethanol.
[0033] 海外で実際に食品保存料として使用されているナイシンは、酸性では安定であるが 、中性、アルカリ性域では不安定で、分解されやすいという性質を持つ。本発明の抗 菌性ペプチド (ラタティシン Q)は中性、アルカリ性域の安定性に優れているため、そ のような食材の静菌効果が期待できる。また、ラタティシン Qはエタノールでの安定性 にも優れているため、エタノールベースの抗菌剤の素材としても利用が可能である。 そこで、以下に実施例を上げてさらに詳細に説明する力 S、本発明はこれらの実施例 によって限定されるものではない。 [0033] Nisin, which is actually used as a food preservative overseas, is stable in acidity, but unstable in neutral and alkaline regions and has a property of being easily decomposed. Since the antibacterial peptide (latathicin Q) of the present invention is excellent in neutral and alkaline stability, the bacteriostatic effect of such foods can be expected. Rataticin Q is also excellent in ethanol stability and can be used as a material for ethanol-based antibacterial agents. Accordingly, the force S described below in further detail with reference to examples, and the present invention is not limited to these examples.
実施例 1  Example 1
[0034] 食品保存件試験 (卵焼きの保存件試験)  [0034] Food Preservation Test (Fried Egg Preservation Test)
弱アルカリ性食材である卵焼きに対するラタティシン Qの静菌効果にっレ、て、ナイシ ン Zとの比較検討を行った。  A comparative study with Nisin Z was conducted based on the bacteriostatic effect of Ratathicin Q on fried eggs, a weak alkaline food.
ラタティシン Qとナイシン Zの粗精製物 (4200ユニット/ mlとなるように滅菌蒸留水で 調製)を使用し、表 4の割合で材料を混合し、卵焼きを作成した。卵焼きを作成後、 25 °Cで 24時間保存し、保存後の一般生菌数を調べた。 (バタテリオシン溶液の添加量 は対卵 1.5%とした。 )  Using the crudely purified product of ratathisin Q and nisin Z (prepared with sterile distilled water to 4200 units / ml), the ingredients were mixed at the ratios shown in Table 4 to prepare fried eggs. After preparing the fried egg, it was stored at 25 ° C for 24 hours, and the number of viable bacteria after storage was examined. (The amount of batateriocin solution added was 1.5% for eggs.)
[0035] [表 4] 配合割合 (重量%) [0035] [Table 4] Mixing ratio (wt%)
無添カロ ラクティシン Q添加 ナイシン Z添加  Unadded Caro Lacticin Q added Nisin Z added
卵 100 100 100  Egg 100 100 100
水 12.fi 11.1 11.1  Water 12.fi 11.1 11.1
1 1 1  1 1 1
でん粉 0.6 0.6 0.S  Starch 0.6 0.6 0.S
ラクティシン Q - 1.5  Lacticin Q-1.5
ナイシン Z 一 ― 1.5 結果を表 5に示す。結果としてラタティシン Qを弱アルカリ性食材である卵焼きに添 加した場合、ナイシン Zを添加した場合よりも一般生菌数を 1オーダー程度低く抑える ことができた。 Nisin Z 1 ― 1.5 The results are shown in Table 5. As a result, when ratathicin Q was added to the fried egg, which is a weak alkaline food, the number of viable bacteria could be reduced by about an order of magnitude compared to the case of adding nisin Z.
[表 5] 食品保存性試験結果 (一般生菌数:個/ g)
Figure imgf000014_0001
[Table 5] Food storage stability test results (general viable count: pcs / g)
Figure imgf000014_0001
実施例 2  Example 2
[0037] エタノールベースラタティシン Qの抗菌活性試験  [0037] Antibacterial activity test of ethanol-based ratathicin Q
ラタティシン Qの粗精製サンプノレを、終濃度が 200 μ g/mlとなるように 30%のエタノー ルに添加した。 N/5の塩酸を用いて pHを 3.5に調整した。 30%のエタノール溶液、 200 μ g/mlラタティシン Q水溶液をコントロールとして、バイオアツセィにて抗菌活性を評 価した。調製したサンプル 200 μ 1に指標菌の培養液(107CFU/ml)を 20 μ 1添加し、 1 分間接触させた。その後、指標菌と混合したサンプル 100 1を SCDLP培地 (栄研器 材株式会社製) 100 μ ΐと混合し、各指標菌の至適温度にて培養を行った。 24、 48、 72 時間後に指標菌の増殖の有無を目視で確認した。指標菌には大腸菌(Escherichia c oilリ、 色フドウ球 (Staphylococcus epidermidis)、リスアリア (Listeria  Ratatisine Q crude purified sample was added to 30% ethanol to a final concentration of 200 μg / ml. The pH was adjusted to 3.5 using N / 5 hydrochloric acid. The antibacterial activity was evaluated by bioassay using a 30% ethanol solution and 200 μg / ml ratathicin Q aqueous solution as controls. To the prepared sample (200 μl), 20 μl of indicator medium culture solution (107 CFU / ml) was added and contacted for 1 minute. Thereafter, sample 1001 mixed with indicator bacteria was mixed with 100 μΐ of SCDLP medium (manufactured by Eiken Kikai Co., Ltd.), and cultured at the optimum temperature for each indicator bacteria. After 24, 48 and 72 hours, the presence or absence of indicator bacteria was visually confirmed. The indicator bacteria include Escherichia c oil, Staphylococcus epidermidis, and Listeria.
innocua) 用レヽた。  innocua).
結果を表 6に示す。結果として、ラタティシン Qのみを含む水溶液では、指標菌に対 して静菌効果を示さなかったが、ラタティシン Qを 30%エタノールと組み合わせることに より、ブドウ球菌やリステリア菌、さらにはグラム陰性細菌である大腸菌に対しても、 72 時間以上の静菌効果を示した。また、この効果は 30%エタノール単独使用よりも優れ ていた。  The results are shown in Table 6. As a result, the aqueous solution containing only ratatisin Q did not show bacteriostatic effects on the indicator bacteria, but by combining ratatisin Q with 30% ethanol, it can be used in staphylococci, listeria, and even gram-negative bacteria. It also showed bacteriostatic effect for 72 hours or more against some E. coli. This effect was superior to the use of 30% ethanol alone.
ラタティシン Qは Enterococcus属細菌に対する抗菌効果に優れてレ、るため、 VREや MRSAといった院内感染の原因菌に対しても、抗菌効果を示すと考えられ、優れた抗 菌剤の素材として期待できる。  Ratathicin Q has an excellent antibacterial effect against Enterococcus bacteria, and is therefore expected to show antibacterial effects against nosocomial pathogens such as VRE and MRSA, and can be expected as an excellent antibacterial material.
[0038] [表 6] 30%エタノールベースラクティシン Qの抗菌活' 14試験 [0038] [Table 6] Antimicrobial activity of 30% ethanol-based lactisin Q '14 test
培養時間 (時間)  Incubation time (hours)
大腸菌 ブドウ球菌 リ :スァァ ¾  Escherichia coli Staphylococcus re: Suwa ¾
24 48 72 24 48 72 24 48 72  24 48 72 24 48 72 24 48 72
30% エタノ-ル - - - + + + + + - - + +  30% ethanol---+ + + + +--+ +
ラクティシン Q + + 十 + + + + + + + + + 十 + + + + +  Lacticin Q + + Ten + + + + + + + + + Ten + + + + +
30% エタ ル ラタティシン Q  30% Ethal Ratathisin Q
+;菌の増殖あり、 ·;菌の堉殖無し 産業上の利用可能性  +: Fungus growth · · · No fungus growth Industrial applicability
本発明の新菌株およびそれにより生産される抗菌性ペプチドは、食品の保存や殺 菌 '消毒等の目的の抗菌剤の素材として多くの分野において利用することができ、特 に、中性やアルカリ性領域において使用されても有効である。  The new strain of the present invention and the antibacterial peptide produced thereby can be used in many fields as a material for antibacterial agents for the purpose of food preservation and sterilization 'disinfection, and in particular, neutral and alkaline It is valid even if used in the domain.

Claims

請求の範囲 The scope of the claims
下記のアミノ酸配列:  The following amino acid sequence:
Met— Ala— Gly— Phe— Leu— Lys― Val― Val― Gin— Leu— Leu— Ala— Lys― Tyr― Gly— Ser— Lys― Ala― Val— Gin— Trp― Ala― Trp— Ala— Asn— Lys― Gly― Lys― II e— Leu— Asp— Trp― Leu—Asn— Ala— Gly— Gin— Ala— He— Asp— Trp― Val― Val ― Ser― Lys― lie― Lys― Gin― lie― Leu― Gly— He― Lys  Met- Ala- Gly- Phe- Leu- Lys- Val- Val- Gin- Leu- Leu- Ala- Lys- Tyr- Gly- Ser- Lys- Ala- Val- Gin- Trp- Ala- Trp- Ala- Asn- Lys- Gly- Lys- II e- Leu- Asp- Trp- Leu- Asn- Ala- Gly- Gin- Ala- He- Asp- Trp- Val- Val- Ser- Lys- lie- Lys- Gin- lie- Leu ― Gly— He― Lys
から成る一次構造を有することを特徴とする抗菌性ペプチド。 An antibacterial peptide having a primary structure consisting of
請求項 1のペプチドをコードすることを特徴とする DNA。  A DNA encoding the peptide of claim 1.
請求項 1の抗菌性ペプチドを産生するラタトコッカス ·ラクテイス(Lactococcus lactis) QU 1005菌株(NITE BP- 23)。  The Lactococcus lactis QU 1005 strain (NITE BP-23) which produces the antimicrobial peptide of claim 1.
請求項 1の抗菌性ペプチドを有効成分として含有することを特徴とする抗菌剤。  An antibacterial agent comprising the antibacterial peptide of claim 1 as an active ingredient.
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Cited By (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP2012170377A (en) * 2011-02-21 2012-09-10 Minori Inc New lactic acid bacterium
WO2017069227A1 (en) * 2015-10-23 2017-04-27 株式会社優しい研究所 Health care composition including bacteriocin
CN109627300A (en) * 2019-02-18 2019-04-16 浙江新银象生物工程有限公司 The exploitation of Nisin solution stabilizer and application
WO2022253743A1 (en) * 2021-06-02 2022-12-08 Syngulon S.A. Bacteriocin for new application
WO2023041435A1 (en) * 2021-09-14 2023-03-23 Syngulon S.A. Bacteriocin for applications against mycobacterium

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
MULDERS J.W. ET AL: "Identification and characterization of the lantibiotic nisin Z, a natural nisin variant", EUR J BIOCHEM, vol. 201, no. 3, 1991, pages 581 - 584, XP002993883 *

Cited By (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP2012170377A (en) * 2011-02-21 2012-09-10 Minori Inc New lactic acid bacterium
WO2017069227A1 (en) * 2015-10-23 2017-04-27 株式会社優しい研究所 Health care composition including bacteriocin
JPWO2017069227A1 (en) * 2015-10-23 2018-10-04 株式会社優しい研究所 Healthcare composition comprising bacteriocin
CN109627300A (en) * 2019-02-18 2019-04-16 浙江新银象生物工程有限公司 The exploitation of Nisin solution stabilizer and application
CN109627300B (en) * 2019-02-18 2022-08-05 浙江新银象生物工程有限公司 Nisin solution stabilizer development and application
WO2022253743A1 (en) * 2021-06-02 2022-12-08 Syngulon S.A. Bacteriocin for new application
WO2023041435A1 (en) * 2021-09-14 2023-03-23 Syngulon S.A. Bacteriocin for applications against mycobacterium

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