WO2005076005A3 - A method for classifying a tumor cell sample based upon differential expression of at least two genes - Google Patents
A method for classifying a tumor cell sample based upon differential expression of at least two genes Download PDFInfo
- Publication number
- WO2005076005A3 WO2005076005A3 PCT/EP2005/000858 EP2005000858W WO2005076005A3 WO 2005076005 A3 WO2005076005 A3 WO 2005076005A3 EP 2005000858 W EP2005000858 W EP 2005000858W WO 2005076005 A3 WO2005076005 A3 WO 2005076005A3
- Authority
- WO
- WIPO (PCT)
- Prior art keywords
- classifying
- cell sample
- tumor cell
- genes
- differential expression
- Prior art date
Links
Classifications
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
- G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
- G01N33/50—Chemical analysis of biological material, e.g. blood, urine; Testing involving biospecific ligand binding methods; Immunological testing
- G01N33/53—Immunoassay; Biospecific binding assay; Materials therefor
- G01N33/574—Immunoassay; Biospecific binding assay; Materials therefor for cancer
- G01N33/57484—Immunoassay; Biospecific binding assay; Materials therefor for cancer involving compounds serving as markers for tumor, cancer, neoplasia, e.g. cellular determinants, receptors, heat shock/stress proteins, A-protein, oligosaccharides, metabolites
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
- C12Q1/6886—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/118—Prognosis of disease development
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/156—Polymorphic or mutational markers
Abstract
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
EP04450020.5 | 2004-01-30 | ||
EP04450020 | 2004-01-30 |
Publications (2)
Publication Number | Publication Date |
---|---|
WO2005076005A2 WO2005076005A2 (en) | 2005-08-18 |
WO2005076005A3 true WO2005076005A3 (en) | 2009-02-05 |
Family
ID=34833853
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
PCT/EP2005/000858 WO2005076005A2 (en) | 2004-01-30 | 2005-01-28 | A method for classifying a tumor cell sample based upon differential expression of at least two genes |
Country Status (1)
Country | Link |
---|---|
WO (1) | WO2005076005A2 (en) |
Cited By (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN107312854A (en) * | 2017-07-20 | 2017-11-03 | 北京泱深生物信息技术有限公司 | A kind of diagnosis marker and its therapeutic targets of larynx squamous carcinoma |
Families Citing this family (16)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CA2506066A1 (en) | 2002-11-15 | 2004-06-03 | Genomic Health, Inc. | Gene expression profiling of egfr positive cancer |
BRPI0706511A2 (en) | 2006-01-11 | 2011-03-29 | Genomic Health Inc | gene expression markers for colorectal cancer prognosis |
WO2007123772A2 (en) | 2006-03-31 | 2007-11-01 | Genomic Health, Inc. | Genes involved in estrogen metabolism |
US8765383B2 (en) | 2009-04-07 | 2014-07-01 | Genomic Health, Inc. | Methods of predicting cancer risk using gene expression in premalignant tissue |
WO2010127322A1 (en) | 2009-05-01 | 2010-11-04 | Genomic Health Inc. | Gene expression profile algorithm and test for likelihood of recurrence of colorectal cancer and response to chemotherapy |
EP2913405B1 (en) | 2010-07-27 | 2016-11-09 | Genomic Health, Inc. | Method for using gene expression to determine prognosis of prostate cancer |
WO2012154983A2 (en) | 2011-05-10 | 2012-11-15 | Biocare Medical, Llc | Systems and methods for anti-pax8 antibodies |
JP6351112B2 (en) | 2012-01-31 | 2018-07-04 | ジェノミック ヘルス, インコーポレイテッド | Gene expression profile algorithms and tests to quantify the prognosis of prostate cancer |
EP2900265B1 (en) | 2012-09-27 | 2018-05-30 | Biocare Medical, LLC | Anti-uroplakin ii antibodies systems and methods |
US10429390B2 (en) | 2012-12-18 | 2019-10-01 | Biocare Medical, Llc | Antibody cocktail systems and methods for classification of histologic subtypes in lung cancer |
JP6445467B2 (en) | 2013-02-28 | 2019-01-09 | バイオケア メディカル, エルエルシー | Anti-P40 antibody system and method |
WO2015051320A2 (en) | 2013-10-03 | 2015-04-09 | Biocare Medical, Llc | Anti-sox10 antibody systems and methods |
IT201700109459A1 (en) * | 2017-09-29 | 2019-03-29 | Univ Degli Studi Di Perugia | METHOD TO PERFORM PROGNOSIS OF BREAST CANCER, KITS AND THE USE OF THESE |
CN111159409B (en) * | 2019-12-31 | 2023-06-02 | 腾讯科技(深圳)有限公司 | Text classification method, device, equipment and medium based on artificial intelligence |
CN112816431A (en) * | 2020-09-22 | 2021-05-18 | 西华师范大学 | Dual-wavelength capillary electrophoresis detection system for detecting tumor marker |
CN117594133A (en) * | 2024-01-19 | 2024-02-23 | 普瑞基准科技(北京)有限公司 | Screening method of biomarker for distinguishing uterine lesion type and application thereof |
Citations (2)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2001074405A1 (en) * | 2000-03-31 | 2001-10-11 | Gene Logic, Inc. | Gene expression profiles in esophageal tissue |
WO2001094629A2 (en) * | 2000-06-05 | 2001-12-13 | Avalon Pharmaceuticals | Cancer gene determination and therapeutic screening using signature gene sets |
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2005
- 2005-01-28 WO PCT/EP2005/000858 patent/WO2005076005A2/en active Application Filing
Patent Citations (2)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2001074405A1 (en) * | 2000-03-31 | 2001-10-11 | Gene Logic, Inc. | Gene expression profiles in esophageal tissue |
WO2001094629A2 (en) * | 2000-06-05 | 2001-12-13 | Avalon Pharmaceuticals | Cancer gene determination and therapeutic screening using signature gene sets |
Non-Patent Citations (7)
Title |
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AMATSCHEK STEFAN ET AL: "Tissue-wide expression profiling using cDNA subtraction and microarrays to identify tumor-specific gene.", CANCER RESEARCH, vol. 64, no. 3, 1 February 2004 (2004-02-01), pages 844 - 856, XP001206325, ISSN: 0008-5472 * |
CHANG K ET AL: "FREQUENT EXPRESSION OF THE TUMOR ANTIGEN CAK1 IN SQUAMOUS-CELL CARCINOMAS", INTERNATIONAL JOURNAL OF CANCER, NEW YORK, NY, US, vol. 51, no. 4, 19 June 1992 (1992-06-19), pages 548 - 554, XP002038952, ISSN: 0020-7136 * |
HUDELIST GERNOT ET AL: "Use of high-throughput protein array for profiling of differentially expressed proteins in normal and malignant breast tissue.", BREAST CANCER RESEARCH AND TREATMENT. AUG 2004, vol. 86, no. 3, August 2004 (2004-08-01), pages 281 - 291, XP001206326, ISSN: 0167-6806 * |
NEMOTO TETSUO ET AL: "Overexpression of protein tyrosine kinases in human esophageal cancer", PATHOBIOLOGY, vol. 65, no. 4, July 1997 (1997-07-01), pages 195 - 203, XP009048170, ISSN: 1015-2008 * |
SÁNCHEZ-CARBAYO MARTA: "Use of high-throughput DNA microarrays to identify biomarkers for bladder cancer.", CLINICAL CHEMISTRY. JAN 2003, vol. 49, no. 1, January 2003 (2003-01-01), pages 23 - 31, XP001206327, ISSN: 0009-9147 * |
VAN HEEK N TJARDA ET AL: "Gene expression profiling identifies markers of ampullary adenocarcinoma.", CANCER BIOLOGY & THERAPY. JUL 2004, vol. 3, no. 7, July 2004 (2004-07-01), pages 651 - 656, XP009048026, ISSN: 1538-4047 * |
WU L ET AL: "MOLECULAR CLONING OF THE HUMAN CAK1 GENE ENCODING A CYCLIN-DEPENDENT KINASE-ACTIVATING KINASE", ONCOGENE, BASINGSTOKE, HANTS, GB, vol. 9, no. 7, 1 July 1994 (1994-07-01), pages 2089 - 2096, XP000673011, ISSN: 0950-9232 * |
Cited By (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN107312854A (en) * | 2017-07-20 | 2017-11-03 | 北京泱深生物信息技术有限公司 | A kind of diagnosis marker and its therapeutic targets of larynx squamous carcinoma |
Also Published As
Publication number | Publication date |
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WO2005076005A2 (en) | 2005-08-18 |
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