WO2007047680A3 - Increasing the activity of radical s-adenosyl methionine (sam) enzymes - Google Patents

Increasing the activity of radical s-adenosyl methionine (sam) enzymes Download PDF

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Publication number
WO2007047680A3
WO2007047680A3 PCT/US2006/040563 US2006040563W WO2007047680A3 WO 2007047680 A3 WO2007047680 A3 WO 2007047680A3 US 2006040563 W US2006040563 W US 2006040563W WO 2007047680 A3 WO2007047680 A3 WO 2007047680A3
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WO
WIPO (PCT)
Prior art keywords
radical
sam
increasing
enzymes
activity
Prior art date
Application number
PCT/US2006/040563
Other languages
French (fr)
Other versions
WO2007047680A2 (en
Inventor
Ravi R Gokarn
Steven J Gort
Holly J Jessen
Hans H Liao
Brian J Brazeau
Original Assignee
Cargill Inc
Ravi R Gokarn
Steven J Gort
Holly J Jessen
Hans H Liao
Brian J Brazeau
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Cargill Inc, Ravi R Gokarn, Steven J Gort, Holly J Jessen, Hans H Liao, Brian J Brazeau filed Critical Cargill Inc
Publication of WO2007047680A2 publication Critical patent/WO2007047680A2/en
Publication of WO2007047680A3 publication Critical patent/WO2007047680A3/en

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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P13/00—Preparation of nitrogen-containing organic compounds
    • C12P13/04—Alpha- or beta- amino acids
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P11/00—Preparation of sulfur-containing organic compounds
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P13/00—Preparation of nitrogen-containing organic compounds
    • C12P13/02—Amides, e.g. chloramphenicol or polyamides; Imides or polyimides; Urethanes, i.e. compounds comprising N-C=O structural element or polyurethanes
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P13/00—Preparation of nitrogen-containing organic compounds
    • C12P13/04—Alpha- or beta- amino acids
    • C12P13/06—Alanine; Leucine; Isoleucine; Serine; Homoserine
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P13/00—Preparation of nitrogen-containing organic compounds
    • C12P13/04—Alpha- or beta- amino acids
    • C12P13/08—Lysine; Diaminopimelic acid; Threonine; Valine
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P13/00—Preparation of nitrogen-containing organic compounds
    • C12P13/04—Alpha- or beta- amino acids
    • C12P13/10—Citrulline; Arginine; Ornithine
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P17/00—Preparation of heterocyclic carbon compounds with only O, N, S, Se or Te as ring hetero atoms
    • C12P17/18—Preparation of heterocyclic carbon compounds with only O, N, S, Se or Te as ring hetero atoms containing at least two hetero rings condensed among themselves or condensed with a common carbocyclic ring system, e.g. rifamycin
    • C12P17/185—Heterocyclic compounds containing sulfur atoms as ring hetero atoms in the condensed system
    • C12P17/186—Heterocyclic compounds containing sulfur atoms as ring hetero atoms in the condensed system containing a 2-oxo-thieno[3,4-d]imidazol nucleus, e.g. Biotin
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12P—FERMENTATION OR ENZYME-USING PROCESSES TO SYNTHESISE A DESIRED CHEMICAL COMPOUND OR COMPOSITION OR TO SEPARATE OPTICAL ISOMERS FROM A RACEMIC MIXTURE
    • C12P7/00—Preparation of oxygen-containing organic compounds
    • C12P7/40—Preparation of oxygen-containing organic compounds containing a carboxyl group including Peroxycarboxylic acids
    • C12P7/52—Propionic acid; Butyric acids

Abstract

The present disclosure provides methods of increasing the activity of radical S-adenosyl methionine (SAM) enzymes, for example by increasing expression of ferredoxin, flavodoxin, flavodoxin reductase, or combinations thereof in a cell expressing a radical SAM enzyme. Such methods can be used to increase expression of a radical SAM enzyme product, or a downstream organic chemical. Also provided by the present disclosure are cells that have increased expression of ferredoxin, flavodoxin, flavodoxin reductase, or combination thereof. Such cells can be used to practice the disclosed methods.
PCT/US2006/040563 2005-10-14 2006-10-16 Increasing the activity of radical s-adenosyl methionine (sam) enzymes WO2007047680A2 (en)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US72692505P 2005-10-14 2005-10-14
US60/726,925 2005-10-14

Publications (2)

Publication Number Publication Date
WO2007047680A2 WO2007047680A2 (en) 2007-04-26
WO2007047680A3 true WO2007047680A3 (en) 2007-11-29

Family

ID=37963215

Family Applications (1)

Application Number Title Priority Date Filing Date
PCT/US2006/040563 WO2007047680A2 (en) 2005-10-14 2006-10-16 Increasing the activity of radical s-adenosyl methionine (sam) enzymes

Country Status (1)

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WO (1) WO2007047680A2 (en)

Cited By (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US8652816B2 (en) 2007-12-04 2014-02-18 Opx Biotechnologies, Inc. Compositions and methods for 3-hydroxypropionate bio-production from biomass
US8809027B1 (en) 2009-09-27 2014-08-19 Opx Biotechnologies, Inc. Genetically modified organisms for increased microbial production of 3-hydroxypropionic acid involving an oxaloacetate alpha-decarboxylase
US8883464B2 (en) 2009-09-27 2014-11-11 Opx Biotechnologies, Inc. Methods for producing 3-hydroxypropionic acid and other products
US9512057B2 (en) 2013-03-15 2016-12-06 Cargill, Incorporated 3-hydroxypropionic acid compositions

Families Citing this family (12)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
MXPA04006894A (en) 2002-01-18 2004-10-15 Cargill Inc Alanine 2,3- aminomutase.
CA2574280A1 (en) * 2004-07-30 2006-03-02 Cargill, Incorporated Alanine 2, 3 aminomutases
MX2007004980A (en) 2004-10-25 2007-06-14 Codexis Inc Improved alanine 2,3-aminomutases and related polynucleotides.
WO2007047773A2 (en) 2005-10-14 2007-04-26 Codexis, Inc. Alanine 2,3-aminomutases and related polynucleotides
WO2010022763A1 (en) * 2008-08-25 2010-03-04 Metabolic Explorer Method for the preparation of 2-hydroxy-isobutyrate
KR20150040359A (en) 2012-08-10 2015-04-14 오피엑스 바이오테크놀로지스, 인크. Microorganisms and methods for the production of fatty acids and fatty acid derived products
US20150057465A1 (en) 2013-03-15 2015-02-26 Opx Biotechnologies, Inc. Control of growth-induction-production phases
JP6603658B2 (en) 2013-07-19 2019-11-06 カーギル インコーポレイテッド Microorganisms and methods for the production of fatty acids and fatty acid derivatives
US11408013B2 (en) 2013-07-19 2022-08-09 Cargill, Incorporated Microorganisms and methods for the production of fatty acids and fatty acid derived products
EP2993228B1 (en) 2014-09-02 2019-10-09 Cargill, Incorporated Production of fatty acid esters
WO2018127544A1 (en) * 2017-01-06 2018-07-12 Eth Zurich USE OF RADICAL S-ADENOSYL METHIONINE (SAM) ENZYMES FOR INTRODUCING α-KETO-β3-AMINO ACIDS INTO (POLY)PEPTIDES
US11345938B2 (en) 2017-02-02 2022-05-31 Cargill, Incorporated Genetically modified cells that produce C6-C10 fatty acid derivatives

Non-Patent Citations (1)

* Cited by examiner, † Cited by third party
Title
JENKINS ET AL.: "Flavoxodin and NADPH-Flavodoxin Reductase from Escherichia coli Support Bovine Cytochrome P450c17 Hydroxylase Activities", J. BIOL. CHEM., vol. 269, no. 44, 4 November 1994 (1994-11-04), pages 27401 - 27408 *

Cited By (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US8652816B2 (en) 2007-12-04 2014-02-18 Opx Biotechnologies, Inc. Compositions and methods for 3-hydroxypropionate bio-production from biomass
US8809027B1 (en) 2009-09-27 2014-08-19 Opx Biotechnologies, Inc. Genetically modified organisms for increased microbial production of 3-hydroxypropionic acid involving an oxaloacetate alpha-decarboxylase
US8883464B2 (en) 2009-09-27 2014-11-11 Opx Biotechnologies, Inc. Methods for producing 3-hydroxypropionic acid and other products
US9388419B2 (en) 2009-09-27 2016-07-12 Cargill, Incorporated Methods for producing 3-hydroxypropionic acid and other products
US9428778B2 (en) 2009-09-27 2016-08-30 Cargill, Incorporated Method for producing 3-hydroxypropionic acid and other products
US9512057B2 (en) 2013-03-15 2016-12-06 Cargill, Incorporated 3-hydroxypropionic acid compositions

Also Published As

Publication number Publication date
WO2007047680A2 (en) 2007-04-26

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