WO1997049831A1 - Glyceraldehyde-3-phosphate dehydrogenase and nuclear restoration of cytoplasmic male sterility - Google Patents
Glyceraldehyde-3-phosphate dehydrogenase and nuclear restoration of cytoplasmic male sterility Download PDFInfo
- Publication number
- WO1997049831A1 WO1997049831A1 PCT/CA1997/000424 CA9700424W WO9749831A1 WO 1997049831 A1 WO1997049831 A1 WO 1997049831A1 CA 9700424 W CA9700424 W CA 9700424W WO 9749831 A1 WO9749831 A1 WO 9749831A1
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- WIPO (PCT)
- Prior art keywords
- gene
- restorer
- glyceraldehyde
- plants
- male sterility
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N9/00—Enzymes; Proenzymes; Compositions thereof; Processes for preparing, activating, inhibiting, separating or purifying enzymes
- C12N9/0004—Oxidoreductases (1.)
- C12N9/0008—Oxidoreductases (1.) acting on the aldehyde or oxo group of donors (1.2)
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
- C12N15/82—Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
- C12N15/8241—Phenotypically and genetically modified plants via recombinant DNA technology
- C12N15/8261—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield
- C12N15/8287—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield for fertility modification, e.g. apomixis
- C12N15/8289—Male sterility
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
- C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
- C12Q1/6895—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for plants, fungi or algae
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/13—Plant traits
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- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q2600/00—Oligonucleotides characterized by their use
- C12Q2600/156—Polymorphic or mutational markers
Definitions
- the invention relates to a marker for nuclear restoration of cytoplasmic male sterility, and more particularly to the use of glyceraldehyde-3-phosphate dehydrogenase complementary DNA as such a marker.
- the invention also relates to a gene for nuclear restora ⁇ tion of cytoplasmic male sterility, and more particu ⁇ larly to the use of a form of the gene encoding glycer- aldehyde-3-phosphate dehydrogenase for this purpose.
- the invention relates to the production of restorer lines directly through genetic transformation of plants with such a gene, (b) Description of Prior Art
- Hybrids of different crop varieties may show yields that are considerably greater than those of the parental lines. This phenomenon is known as hybrid vigor.
- hybrid vigor To implement the use of hybrid vigor it is nec ⁇ essary to have a . method available for preventing self-pollination of one or both of the parent lines in the hybrid cross. Mechanical, chemical and genetic methods are available for accomplishing this.
- One established genetic method involves the trait of cyto ⁇ plasmic male sterility (CMS).
- CMS cyto ⁇ plasmic male sterility
- CMS cyto ⁇ plasmic male sterility
- restorers of fertility can be incorporated into the pollinating parent of the hybrid cross.
- Genotypes on which the male ster ⁇ ile cytoplasm confers sterility are termed maintainers whereas those carrying Rf genes are termed restorers; the genes for the maintenance and restoration of CMS can be considered as different alleles (rf and Rf, respectively) at the same locus.
- progeny plants are first screened for genetic markers linked to the restorer gene rather than the restorer gene itself. These markers are chosen such that they can be screened for at a very early stage in plant development. This circumvents the costly procedure of raising many prog ⁇ eny plants to maturity and can considerably accelerate the introgression process.
- Restriction fragment length polymorphisms represent a type of DNA marker that is ideally suited for this purpose. RFLPs are differences (between two genotypes) in restriction fragment patterns detected by specific DNA probes.
- Probes that detect fragment pattern differences between restorer and maintainer lines and that co-segregate with the Rf gene can be used to indirectly select for the restorer gene in a plant breeding program.
- One aim of the present invention is to provide a marker for nuclear restoration associated with cyto ⁇ plasmic male sterility. Another aim of the present invention is to pro ⁇ vide the use of glyceraldehyde-3-phosphate dehydro ⁇ genase complementary DNA as such a restorer marker.
- Another aim of the present invention is to be able to use this gene to produce restorer lines directly through genetic transformation.
- a probe specific for nuclear restoration of cytoplasmic male sterility of plants which comprises a glyceraldehyde-3-phosphate dehydrogenase cDNA or genomic DNA sequence, a hybridizing fragment thereof or any DNA sequence derived therefrom for use as primers for amplification of glyceraldehyde-3-phosphate dehy ⁇ drogenase, wherein said DNA sequence or hybridizing fragment thereof hybridizes to specific DNA fragments characteristic of plants possessing a nuclear restorer gene under stringent conditions.
- a gene for nuclear restoration of cytoplasmic male sterility in plants which comprises a DNA sequence encoding glyceraldehyde-3-phosphate dehy ⁇ drogenase and surrounding sequences.
- the surrounding sequences may be located 3 ' and/or 5 ' relative to the glyceraldehyde-3-phosphate dehydrogenase sequence and may be of about 50kb.
- a method of production of restorer lines which comprises genetically transforming plants with the nuclear restoration of cytoplasmic male ste ⁇ rility gene of the present invention.
- any plant species may be used provided that the restorer gene in the plant species corresponds to a specific form of GAPC.
- Such species include, without limita- tion, Brassica napus, other Brassica species, maize ( Zea mays ) , rice ( Oryza sativum) , sunflower ( Helianthus annuum) and sorghum ( Sorghum bicolor) .
- Fig. 1 is a schematic representation of the use of cytoplasmic male sterility (CMS) in hybrid seed pro ⁇ duction;
- CMS cytoplasmic male sterility
- Fig. 2 shows the crosses used to identify a marker completely linked to the Rfpl restorer of fer- tility gene
- Figs. 3A to 3E show the comparison of Brassica napus cDNA clone cRFl (SEQ ID NO:l) with cytoplasmic glyceraldehyde-3-phosphate dehydrogenase (GAPC) cDNAs from Sinapis alba (SEQ ID NO:2) and Arabidopsis tha - liana (SEQ ID NO:3); and
- Fig. 4 illustrates a gel of the polymorphism detected by cRFl probe in Brassica napus in a genetic population segregating for the Rfpl gene.
- the DNA probe that detected this polymorphism is a B. napus complementary DNA (cDNA), i.e., a DNA com ⁇ plementary to a messenger RNA molecule (mRNA).
- cDNA B. napus complementary DNA
- mRNA messenger RNA molecule
- Figs. 3A and 3B which is encoded by the GAPC gene (Shih, M.-C. et al., 1991, Gene, 104:133-138).
- the perfect linkage between the restorer gene and the GAPC polymorphism 5 leads us to believe that the restorer gene is likely to be specific form of GAPC.
- restorer lines in a single step by using genetic transformation to introduce the restorer-specific GAPC gene into maintainer genotypes (genotypes that do not naturally contain the restorer). 5 This would be extremely cost effective as it would eliminate many steps in the plant breeding process necessary for the development of such lines. If the association between GAPC and restorer genes is extended to other crop species, this would represent a general 0 method for the isolation of restorer genes and the development of restorer lines in many crops.
- a CMS line Three plant genotypes will be considered: A a CMS line;
- B a male fertile line that lacks the restorer gene and contains a male fertile cytoplasm
- R a male fertile line that contains the restorer gene and a male sterile cytoplasm. It will be assumed that hybrids between lines A and B that are produced by manual genetic crosses show considerable hybrid vigour; hybrids between A and R do not. As line B lacks a restorer gene, it is not possi ⁇ ble to produce male fertile hybrids of these two lines using CMS. If, however, the restorer gene could be transferred from line R to line B without otherwise altering the characteristics of line B, it would be possible to obtain male fertile hybrids between lines A and B using CMS. Traditionally, this would be done through a process termed introgression.
- Line R is crossed as a female .with line B to produce a male fer ⁇ tile FI hybrid of A and B that contains the male ster ⁇ ile cytoplasm (the cytoplasm of a hybrid is derived exclusively from the female parent) but is also male fertile because it has received a single copy of the restorer gene from the line R parent.
- a second cross (termed a backcross) is then performed between the hybrid (as female) and the line B. Large numbers of progeny grown are in the field, and equal numbers of steriles and fertiles are expected, fertiles possessing the restorer gene.
- One or more fertiles are then used as females in a second backcross to line B; fertile plants are recovered and crossed as females to line B for a third time.
- the GAPC probe facilitates this process because it allows for the assessment of the presence of the restorer gene in progeny plants at the seedling stage.
- DNA is extracted from a small amount of leaf material, digested with a restriction endonuclease, such as HindiII (used in Fig. 4) and analyzed using the GAPC probe.
- the presence of the restriction fragment char- acteristic of the restorer gene indicates that the seedling has the restorer gene.
- Very large numbers of plants at the seedling stage are screened at much lower cost that the cost of raising the same plants to matur ⁇ ity in the field.
- the male fertile pheno- type is affected by many different conditions and screening for the presence of the gene by screening for a perfectly linked polymorphism more reliably detect the presence of the gene during this introgression pro ⁇ cedure.
- Example I The three plant genotypes of Example I will be considered in accordance with this procedure.
- Example I the problem is precisely the same as that of Example I, namely the transfer of the restorer gene from line R into line B without otherwise altering the characteristics of line B.
- the form of the GAPC gene that represents the restorer gene has been isolated and - 10 -
- lines A, B and R are Brassica napus lines, 0 and that the cloned restorer gene is identical to that of line R.
- Moloney et al. Moloney, M., Walker, J. & Sharma, K. (1989) Plant Cell Rep. 8:238-242
- an Agrobacteri um strain harboring the gene in the prRD400 vector is used to inoculate 5 cotyledons from strain B seedlings.
- the Agrobacterium is eliminated by antibiotic treatment and the resulting plant tissue is placed on media containing the antibi ⁇ otic kanamycin.
- pRD400 contains a gene that confers resistance to kanamycin, and hence cells that grow on 0 this antibiotic are likely have acquired the kanamycin gene, along with the restorer gene which is cloned into pRD400.
- the presence of the restorer gene in these plants is then assessed directly by testing the plants form the presence of restriction fragments character- 5 istic of the restorer using a GAPC probe. It is expected that these plants will be made fertile if they contain the male sterile cytoplasm and that FI progeny from a cross between line A (as female) and the new transgenic line will also be male fertile.
- GCGAATTCTC TACTTTCACG TGACGTGATA AGAAGTTTGT AGACCGGTTG TTTTTTATTT 1200
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Abstract
Description
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Priority Applications (5)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
AU30857/97A AU732094B2 (en) | 1996-06-26 | 1997-06-16 | Glyceraldehyde-3-phosphate dehydrogenase and nuclear restoration of cytoplasmic male sterility |
JP10501998A JP2000512153A (en) | 1996-06-26 | 1997-06-16 | Glyceraldehyde triphosphate dehydrogenase and nuclear restoration of cytoplasmic male sterility |
CA002258561A CA2258561C (en) | 1996-06-26 | 1997-06-16 | Glyceraldehyde-3-phosphate dehydrogenase and nuclear restoration of cytoplasmic male sterility |
EP97925801A EP0954604A1 (en) | 1996-06-26 | 1997-06-16 | Glyceraldehyde-3-phosphate dehydrogenase and nuclear restoration of cytoplasmic male sterility |
US09/219,194 US6410230B1 (en) | 1996-06-26 | 1998-12-23 | Glyceraldehyde-3-phosphate dehydrogenase and nuclear restoration of cytoplasmic male sterility |
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US2055396P | 1996-06-26 | 1996-06-26 | |
US60/020,553 | 1996-06-26 |
Related Child Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
US09/219,194 Continuation US6410230B1 (en) | 1996-06-26 | 1998-12-23 | Glyceraldehyde-3-phosphate dehydrogenase and nuclear restoration of cytoplasmic male sterility |
Publications (1)
Publication Number | Publication Date |
---|---|
WO1997049831A1 true WO1997049831A1 (en) | 1997-12-31 |
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ID=21799249
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
PCT/CA1997/000424 WO1997049831A1 (en) | 1996-06-26 | 1997-06-16 | Glyceraldehyde-3-phosphate dehydrogenase and nuclear restoration of cytoplasmic male sterility |
Country Status (9)
Country | Link |
---|---|
EP (1) | EP0954604A1 (en) |
JP (1) | JP2000512153A (en) |
CN (1) | CN1228126A (en) |
AU (1) | AU732094B2 (en) |
CA (1) | CA2258561C (en) |
CZ (1) | CZ424098A3 (en) |
HU (1) | HUP9904008A3 (en) |
PL (1) | PL330793A1 (en) |
WO (1) | WO1997049831A1 (en) |
Cited By (4)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
WO2003006622A3 (en) * | 2001-07-12 | 2003-10-23 | Univ Mcgill | Nuclear fertility restorer genes and methods of use in plants |
US7314971B2 (en) | 2001-07-12 | 2008-01-01 | Basf Plant Science Gmbh | Nuclear fertility restorer genes and methods of use in plants |
US7767886B2 (en) * | 2001-04-25 | 2010-08-03 | Institut National De La Recherche Agronomique | Protein involved in restoration of cytoplasmic male sterility to fertility and gene encoding the protein |
AU2008202565B2 (en) * | 2002-07-12 | 2012-04-12 | Basf Plant Science Gmbh | Nuclear fertility restorer genes and methods of use in plants |
-
1997
- 1997-06-16 JP JP10501998A patent/JP2000512153A/en active Pending
- 1997-06-16 HU HU9904008A patent/HUP9904008A3/en unknown
- 1997-06-16 AU AU30857/97A patent/AU732094B2/en not_active Ceased
- 1997-06-16 WO PCT/CA1997/000424 patent/WO1997049831A1/en not_active Application Discontinuation
- 1997-06-16 PL PL97330793A patent/PL330793A1/en unknown
- 1997-06-16 EP EP97925801A patent/EP0954604A1/en not_active Withdrawn
- 1997-06-16 CN CN97197340A patent/CN1228126A/en active Pending
- 1997-06-16 CA CA002258561A patent/CA2258561C/en not_active Expired - Fee Related
- 1997-06-16 CZ CZ984240A patent/CZ424098A3/en unknown
Non-Patent Citations (4)
Title |
---|
DELOURME R ET AL: "Identification of RAPD markers linked to a fertility restorer gene for the Ogura radish cytoplasmic male fertility of rapeseed (Brassica napus L.)", THEORETICAL AND APPLIED GENETICS, vol. 88, no. 6-7, 1994, pages 741 - 48, XP002043620 * |
SCHNABLE P ET AL: "Recovery of heritible, transposon-induced, mutant alleles of the RF2 nuclear restorer of T-cytoplasm maize", GENETICS, vol. 136, no. 3, 1994, pages 1171 - 85, XP002043621 * |
SINGH M ET AL: "Nuclear genes associated with a single Brassica CMS restorer locus influence transcripts of three different mitochondrial gene regions", GENETICS, vol. 143, no. 1, May 1996 (1996-05-01), pages 505-16, XP002043618 * |
WISE R ET AL: "mapping complementary genes in maize: Positioning the RF1 and RF2 nuclear-fertility restorer loci of texas (T) cytoplasm relative to RFLP and visible markers", THEORETICAL AND APPLIED GENETICS, vol. 88, no. 6-7, 1994, pages 785 - 95, XP002043619 * |
Cited By (6)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US7767886B2 (en) * | 2001-04-25 | 2010-08-03 | Institut National De La Recherche Agronomique | Protein involved in restoration of cytoplasmic male sterility to fertility and gene encoding the protein |
US8134045B2 (en) | 2001-04-25 | 2012-03-13 | Institut National De La Recherche Agronomique | Protein involved in restoration of cytoplasmic male sterility to fertility and gene encoding the protein and gene |
WO2003006622A3 (en) * | 2001-07-12 | 2003-10-23 | Univ Mcgill | Nuclear fertility restorer genes and methods of use in plants |
US7071375B2 (en) | 2001-07-12 | 2006-07-04 | Mcgill University | Nuclear fertility restorer genes and methods of use in plants |
US7314971B2 (en) | 2001-07-12 | 2008-01-01 | Basf Plant Science Gmbh | Nuclear fertility restorer genes and methods of use in plants |
AU2008202565B2 (en) * | 2002-07-12 | 2012-04-12 | Basf Plant Science Gmbh | Nuclear fertility restorer genes and methods of use in plants |
Also Published As
Publication number | Publication date |
---|---|
CZ424098A3 (en) | 1999-09-15 |
CA2258561A1 (en) | 1997-12-31 |
CA2258561C (en) | 2009-09-01 |
AU732094B2 (en) | 2001-04-12 |
EP0954604A1 (en) | 1999-11-10 |
PL330793A1 (en) | 1999-06-07 |
JP2000512153A (en) | 2000-09-19 |
HUP9904008A3 (en) | 2001-10-29 |
CN1228126A (en) | 1999-09-08 |
AU3085797A (en) | 1998-01-14 |
HUP9904008A2 (en) | 2000-04-28 |
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