LT3298162T - Tikslinės nukleorūgšties ir variantų aptikimas - Google Patents

Tikslinės nukleorūgšties ir variantų aptikimas

Info

Publication number
LT3298162T
LT3298162T LTEP16723135.6T LT16723135T LT3298162T LT 3298162 T LT3298162 T LT 3298162T LT 16723135 T LT16723135 T LT 16723135T LT 3298162 T LT3298162 T LT 3298162T
Authority
LT
Lithuania
Prior art keywords
variants
detection
nucleic acid
target nucleic
target
Prior art date
Application number
LTEP16723135.6T
Other languages
English (en)
Inventor
Lao Hayamizu SAAL
Anthony Miles GEORGE
Original Assignee
Saga Diagnostics Ab
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Saga Diagnostics Ab filed Critical Saga Diagnostics Ab
Publication of LT3298162T publication Critical patent/LT3298162T/lt

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Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • C12Q1/6886Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844Nucleic acid amplification reactions
    • C12Q1/686Polymerase chain reaction [PCR]
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2527/00Reactions demanding special reaction conditions
    • C12Q2527/107Temperature of melting, i.e. Tm
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2531/00Reactions of nucleic acids characterised by
    • C12Q2531/10Reactions of nucleic acids characterised by the purpose being amplify/increase the copy number of target nucleic acid
    • C12Q2531/107Probe or oligonucleotide ligation
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2563/00Nucleic acid detection characterized by the use of physical, structural and functional properties
    • C12Q2563/159Microreactors, e.g. emulsion PCR or sequencing, droplet PCR, microcapsules, i.e. non-liquid containers with a range of different permeability's for different reaction components
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/112Disease subtyping, staging or classification
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/158Expression markers
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/166Oligonucleotides used as internal standards, controls or normalisation probes

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Engineering & Computer Science (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Genetics & Genomics (AREA)
  • Immunology (AREA)
  • Analytical Chemistry (AREA)
  • Pathology (AREA)
  • Molecular Biology (AREA)
  • Microbiology (AREA)
  • Biotechnology (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Physics & Mathematics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Hospice & Palliative Care (AREA)
  • Oncology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
LTEP16723135.6T 2015-05-18 2016-05-18 Tikslinės nukleorūgšties ir variantų aptikimas LT3298162T (lt)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
SE1550629 2015-05-18
PCT/EP2016/061121 WO2016184902A1 (en) 2015-05-18 2016-05-18 Detection of target nucleic acid and variants

Publications (1)

Publication Number Publication Date
LT3298162T true LT3298162T (lt) 2020-03-10

Family

ID=56008652

Family Applications (1)

Application Number Title Priority Date Filing Date
LTEP16723135.6T LT3298162T (lt) 2015-05-18 2016-05-18 Tikslinės nukleorūgšties ir variantų aptikimas

Country Status (23)

Country Link
US (2) US11066707B2 (lt)
EP (1) EP3298162B1 (lt)
JP (1) JP6956012B2 (lt)
KR (1) KR102377229B1 (lt)
CN (1) CN107636167B (lt)
AU (1) AU2016263457B2 (lt)
BR (1) BR112017024702A2 (lt)
CA (1) CA2984960C (lt)
CY (1) CY1122788T1 (lt)
DK (1) DK3298162T3 (lt)
EA (1) EA038921B9 (lt)
ES (1) ES2775551T3 (lt)
HR (1) HRP20200321T1 (lt)
HU (1) HUE048349T2 (lt)
IL (1) IL255714B (lt)
LT (1) LT3298162T (lt)
MX (1) MX2017014771A (lt)
PL (1) PL3298162T3 (lt)
PT (1) PT3298162T (lt)
RS (1) RS60032B1 (lt)
SI (1) SI3298162T1 (lt)
WO (1) WO2016184902A1 (lt)
ZA (1) ZA201707740B (lt)

Families Citing this family (8)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP3743211A4 (en) * 2018-01-22 2021-11-24 Luminex Corporation METHODS AND COMPOSITIONS FOR THE ANALYSIS OF DISCRETE MELT
WO2021125854A1 (ko) * 2019-12-20 2021-06-24 고려대학교 산학협력단 극소량의 희귀 단일 염기 변이체 검출용 프라이머 및 이를 이용하여 극소량의 희귀 단일 염기 변이체를 특이적이고 민감하게 검출하는 방법
CN116724124A (zh) * 2020-09-30 2023-09-08 李峰 一种用于dna单核苷酸变异检测的方法、探针及试剂盒及其应用
GB202203187D0 (en) 2022-03-08 2022-04-20 Rarity Bioscience Ab Method of detection of a target nucleic acid sequence
US20230392212A1 (en) 2022-06-03 2023-12-07 Saga Diagnostics Ab Detection of target nucleic acids
US20230392199A1 (en) 2022-06-03 2023-12-07 Saga Diagnostics Ab Detection of target nucleic acids with preamplification
US20240068039A1 (en) 2022-08-31 2024-02-29 Saga Diagnostics Ab Multi-vector detection of variant sequences
WO2024047182A2 (en) 2022-08-31 2024-03-07 Saga Diagnostics Ab Detection of variant esr1 sequences

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US3996345A (en) 1974-08-12 1976-12-07 Syva Company Fluorescence quenching with immunological pairs in immunoassays
US4351760A (en) 1979-09-07 1982-09-28 Syva Company Novel alkyl substituted fluorescent compounds and polyamino acid conjugates
GB9812768D0 (en) 1998-06-13 1998-08-12 Zeneca Ltd Methods
US6440706B1 (en) * 1999-08-02 2002-08-27 Johns Hopkins University Digital amplification
AU2001255754A1 (en) 2000-04-28 2001-11-12 Montclair Group Methods and compositions for the manufacture of molecular beacons
US6887664B2 (en) * 2000-06-06 2005-05-03 Applera Corporation Asynchronous primed PCR
GB0127564D0 (en) 2001-11-16 2002-01-09 Medical Res Council Emulsion compositions
US7198897B2 (en) * 2001-12-19 2007-04-03 Brandeis University Late-PCR
AUPS076902A0 (en) * 2002-02-26 2002-03-21 Commonwealth Scientific And Industrial Research Organisation Novel selective polymerase chain reaction
US20040022764A1 (en) * 2002-07-31 2004-02-05 Hanan Polansky Inhibition of microcompetition with a foreign polynucleotide as treatment of chronic disease
JP4353504B2 (ja) * 2003-05-19 2009-10-28 キヤノン株式会社 核酸の増幅方法および標識化方法、これを用いた核酸検出方法
WO2006094360A1 (en) 2005-03-11 2006-09-14 Molecular Plant Breeding Nominees Ltd Method of amplifying nucleic acid
CA2610863C (en) * 2005-06-07 2017-01-17 Eragen Biosciences, Inc. Methods for detection and typing of nucleic acids
JP5531367B2 (ja) * 2007-08-01 2014-06-25 ダナ−ファーバー キャンサー インスチテュート 標的配列の濃縮
CA3075139C (en) 2008-09-23 2022-04-12 Bio-Rad Laboratories, Inc. Droplet-based assay system
CA2778449C (en) * 2009-10-23 2017-06-20 Luminex Corporation Amplification primers with non-standard bases for increased reaction specificity
EP2614157A4 (en) * 2010-09-08 2014-03-26 Univ Brandeis NUCLEIC ACID DIAGNOSTIC ASSAY COMPOSITIONS AND METHODS FOR VARIABLE SEQUENCE TARGETS
WO2012075231A1 (en) 2010-12-03 2012-06-07 Brandeis University Methods and kits for detecting nucleic acid mutants in wild-type populations
ES2860945T3 (es) 2010-12-27 2021-10-05 Abbott Molecular Inc Cuantificación de muestras de títulos altos por PCR digital
WO2012135664A2 (en) * 2011-03-31 2012-10-04 Dana-Farber Cancer Institute, Inc. Methods and compositions to enable multiplex cold-pcr
CA2834291A1 (en) * 2011-04-25 2012-11-01 Biorad Laboratories, Inc. Methods and compositions for nucleic acid analysis
US9970052B2 (en) * 2012-08-23 2018-05-15 Bio-Rad Laboratories, Inc. Digital assays with a generic reporter
CN105164279B (zh) * 2013-04-25 2021-02-02 萤火虫生物股份有限公司 靶核酸的多重分析
WO2015058176A1 (en) 2013-10-19 2015-04-23 Trovagene, Inc. Detecting mutations in disease over time

Also Published As

Publication number Publication date
SI3298162T1 (sl) 2020-06-30
CN107636167A (zh) 2018-01-26
IL255714B (en) 2020-09-30
IL255714A (en) 2018-01-31
EA038921B1 (ru) 2021-11-10
CY1122788T1 (el) 2021-05-05
CN107636167B (zh) 2022-09-02
JP2018523970A (ja) 2018-08-30
RS60032B1 (sr) 2020-04-30
CA2984960C (en) 2022-10-04
MX2017014771A (es) 2018-08-15
PL3298162T3 (pl) 2020-07-27
HUE048349T2 (hu) 2020-07-28
WO2016184902A1 (en) 2016-11-24
EA201792405A1 (ru) 2018-07-31
EP3298162A1 (en) 2018-03-28
AU2016263457A1 (en) 2017-12-07
KR20180019585A (ko) 2018-02-26
AU2016263457B2 (en) 2020-08-27
PT3298162T (pt) 2020-03-26
KR102377229B1 (ko) 2022-03-22
EP3298162B1 (en) 2019-11-27
ZA201707740B (en) 2021-04-28
BR112017024702A2 (pt) 2018-09-18
DK3298162T3 (da) 2020-03-02
ES2775551T3 (es) 2020-07-27
EA038921B9 (ru) 2021-12-06
US11066707B2 (en) 2021-07-20
JP6956012B2 (ja) 2021-10-27
CA2984960A1 (en) 2016-11-24
HRP20200321T1 (hr) 2020-06-12
US20220056533A1 (en) 2022-02-24
US20180340230A1 (en) 2018-11-29

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