KR102363284B1 - 시퀀싱 공정 - Google Patents

시퀀싱 공정 Download PDF

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KR102363284B1
KR102363284B1 KR1020167036033A KR20167036033A KR102363284B1 KR 102363284 B1 KR102363284 B1 KR 102363284B1 KR 1020167036033 A KR1020167036033 A KR 1020167036033A KR 20167036033 A KR20167036033 A KR 20167036033A KR 102363284 B1 KR102363284 B1 KR 102363284B1
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nucleic acid
molecular tag
template nucleic
sequence
acid molecules
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Korean (ko)
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KR20170012390A (ko
Inventor
캐서린 마리 버크
아론 얼 달링
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롱가스 테크놀로지즈 피티와이 엘티디
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First worldwide family litigation filed litigation Critical https://patents.darts-ip.com/?family=51177418&utm_source=google_patent&utm_medium=platform_link&utm_campaign=public_patent_search&patent=KR102363284(B1) "Global patent litigation dataset” by Darts-ip is licensed under a Creative Commons Attribution 4.0 International License.
Application filed by 롱가스 테크놀로지즈 피티와이 엘티디 filed Critical 롱가스 테크놀로지즈 피티와이 엘티디
Priority to KR1020227004592A priority Critical patent/KR102579902B1/ko
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    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G16B25/20—Polymerase chain reaction [PCR]; Primer or probe design; Probe optimisation
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2535/00—Reactions characterised by the assay type for determining the identity of a nucleotide base or a sequence of oligonucleotides
    • C12Q2535/122—Massive parallel sequencing
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2563/00—Nucleic acid detection characterized by the use of physical, structural and functional properties
    • C12Q2563/179—Nucleic acid detection characterized by the use of physical, structural and functional properties the label being a nucleic acid
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2565/00—Nucleic acid analysis characterised by mode or means of detection
    • C12Q2565/50—Detection characterised by immobilisation to a surface
    • C12Q2565/514—Detection characterised by immobilisation to a surface characterised by the use of the arrayed oligonucleotides as identifier tags, e.g. universal addressable array, anti-tag or tag complement array

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  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Engineering & Computer Science (AREA)
  • Organic Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • General Health & Medical Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Molecular Biology (AREA)
  • Genetics & Genomics (AREA)
  • Analytical Chemistry (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Immunology (AREA)
  • Evolutionary Biology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Medical Informatics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Theoretical Computer Science (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Bioethics (AREA)
  • Databases & Information Systems (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
KR1020167036033A 2014-05-23 2015-05-22 시퀀싱 공정 Active KR102363284B1 (ko)

Priority Applications (1)

Application Number Priority Date Filing Date Title
KR1020227004592A KR102579902B1 (ko) 2014-05-23 2015-05-22 시퀀싱 공정

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
GBGB1409282.9A GB201409282D0 (en) 2014-05-23 2014-05-23 Sequencing process
GB1409282.9 2014-05-23
PCT/GB2015/051518 WO2015177570A1 (en) 2014-05-23 2015-05-22 Sequencing process

Related Child Applications (1)

Application Number Title Priority Date Filing Date
KR1020227004592A Division KR102579902B1 (ko) 2014-05-23 2015-05-22 시퀀싱 공정

Publications (2)

Publication Number Publication Date
KR20170012390A KR20170012390A (ko) 2017-02-02
KR102363284B1 true KR102363284B1 (ko) 2022-02-15

Family

ID=51177418

Family Applications (3)

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KR1020167036033A Active KR102363284B1 (ko) 2014-05-23 2015-05-22 시퀀싱 공정
KR1020237031371A Active KR102864537B1 (ko) 2014-05-23 2015-05-22 시퀀싱 공정
KR1020227004592A Active KR102579902B1 (ko) 2014-05-23 2015-05-22 시퀀싱 공정

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KR1020237031371A Active KR102864537B1 (ko) 2014-05-23 2015-05-22 시퀀싱 공정
KR1020227004592A Active KR102579902B1 (ko) 2014-05-23 2015-05-22 시퀀싱 공정

Country Status (12)

Country Link
US (2) US11047002B2 (enExample)
EP (1) EP3146070B2 (enExample)
JP (1) JP6687605B2 (enExample)
KR (3) KR102363284B1 (enExample)
CN (2) CN116072218A (enExample)
AU (1) AU2015263055B2 (enExample)
CA (1) CA2949925A1 (enExample)
DK (1) DK3146070T5 (enExample)
ES (1) ES2697804T5 (enExample)
GB (1) GB201409282D0 (enExample)
SG (1) SG11201609754QA (enExample)
WO (1) WO2015177570A1 (enExample)

Families Citing this family (11)

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Publication number Priority date Publication date Assignee Title
CN109074430B (zh) 2016-05-26 2022-03-29 贝克顿迪金森公司 分子标记计数调整方法
JP7232180B2 (ja) 2016-11-08 2023-03-02 ベクトン・ディキンソン・アンド・カンパニー 発現プロファイル分類の方法
US11608497B2 (en) 2016-11-08 2023-03-21 Becton, Dickinson And Company Methods for cell label classification
KR101798229B1 (ko) * 2016-12-27 2017-12-12 주식회사 천랩 전장 리보솜 rna 서열정보를 얻는 방법 및 상기 리보솜 rna 서열정보를 이용하여 미생물을 동정하는 방법
EP3684947A1 (en) * 2017-09-20 2020-07-29 Life Technologies Corporation Methods for detection of fusions using compressed molecular tagged nucleic acid sequence data
CN111247589B (zh) * 2017-09-25 2025-06-03 贝克顿迪金森公司 免疫受体条形码错误校正
KR102878365B1 (ko) * 2017-10-09 2025-10-31 주식회사 마크로젠 단일 분자 서열분석 및 핵산서열 특성화를 위한 고유한 분자 식별자
JPWO2019132010A1 (ja) * 2017-12-28 2021-01-21 タカラバイオ株式会社 塩基配列における塩基種を推定する方法、装置及びプログラム
EP3620539B1 (en) 2018-08-10 2026-01-14 Tata Consultancy Services Limited Method and system for improving amplicon sequencing based taxonomic resolution of microbial communities
CA3222084A1 (en) * 2018-08-13 2020-02-20 Illumina Singapore Pte. Ltd. Sequencing algorithm
WO2025255494A1 (en) 2024-06-07 2025-12-11 Illumina, Inc. Identifying the origin of amplified rna molecules

Citations (1)

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WO2006137734A1 (en) 2005-06-23 2006-12-28 Keygene N.V. Improved strategies for sequencing complex genomes using high throughput sequencing technologies

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CA2277520C (en) * 1997-01-15 2006-10-10 Brax Group Limited Nucleic acid sequencing
JP4403069B2 (ja) * 2002-08-12 2010-01-20 独立行政法人理化学研究所 クローニングおよび分析のためのｍＲＮＡの５’末端の使用方法
JP4413017B2 (ja) * 2004-01-15 2010-02-10 独立行政法人理化学研究所 クラスタリングプログラムおよびクラスタリング装置
WO2008005310A2 (en) * 2006-06-30 2008-01-10 Ambit Biosciences Corp. Detectable nucleic acid tag
CN102656279A (zh) 2009-12-17 2012-09-05 凯津公司 基于全基因组测序的限制性酶
SG186876A1 (en) † 2010-06-30 2013-02-28 Bgi Shenzhen Co Ltd New pcr sequencing method and use thereof in hla genotyping
US9033273B2 (en) 2010-11-02 2015-05-19 Jonathan Edelson Integrated aircraft ground navigation control system
PL3246416T3 (pl) 2011-04-15 2024-09-30 The Johns Hopkins University Bezpieczny system sekwencjonowania
US9074204B2 (en) 2011-05-20 2015-07-07 Fluidigm Corporation Nucleic acid encoding reactions
US11177020B2 (en) † 2012-02-27 2021-11-16 The University Of North Carolina At Chapel Hill Methods and uses for molecular tags
DK2828218T3 (da) † 2012-03-20 2020-11-02 Univ Washington Through Its Center For Commercialization Methods of lowering the error rate of massively parallel dna sequencing using duplex consensus sequencing
CN104603286B (zh) 2012-04-24 2020-07-31 Gen9股份有限公司 在体外克隆中分选核酸和多重制备物的方法
EP2898071A4 (en) 2012-09-21 2016-07-20 Broad Inst Inc COMPOSITIONS AND METHODS FOR LONG-TERM LABORATORIES AND PREPARED END OF NUCLEIC ACIDS IN EMULSION DROPS

Patent Citations (1)

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Publication number Priority date Publication date Assignee Title
WO2006137734A1 (en) 2005-06-23 2006-12-28 Keygene N.V. Improved strategies for sequencing complex genomes using high throughput sequencing technologies

Non-Patent Citations (5)

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Applied and Environmental Microbiology (2013) 79(17):5112-5120
European Journal of Clinical Microbiology & Infectious Diseases (2009) 28:1151-1154
Gut Pathogens (2014.02.24.) 6:4
Nature Methods (2013) 10(10):999-1002
PLoS ONE (2011) 6(12):e27310

Also Published As

Publication number Publication date
EP3146070B2 (en) 2024-07-31
AU2015263055B2 (en) 2020-12-03
JP6687605B2 (ja) 2020-04-22
ES2697804T5 (es) 2024-11-25
AU2015263055A1 (en) 2016-12-08
DK3146070T3 (en) 2019-01-07
CN107002120A (zh) 2017-08-01
EP3146070B1 (en) 2018-09-26
KR102579902B1 (ko) 2023-09-18
KR20220025213A (ko) 2022-03-03
CN107002120B (zh) 2022-08-09
WO2015177570A1 (en) 2015-11-26
US20210403991A1 (en) 2021-12-30
KR20230141873A (ko) 2023-10-10
JP2017517282A (ja) 2017-06-29
SG11201609754QA (en) 2016-12-29
GB201409282D0 (en) 2014-07-09
ES2697804T3 (es) 2019-01-28
EP3146070A1 (en) 2017-03-29
US20170183724A1 (en) 2017-06-29
CN116072218A (zh) 2023-05-05
DK3146070T5 (en) 2019-01-21
US11047002B2 (en) 2021-06-29
KR20170012390A (ko) 2017-02-02
KR102864537B1 (ko) 2025-09-24
CA2949925A1 (en) 2015-11-26

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