ES2697804T5 - Proceso de secuenciación - Google Patents

Proceso de secuenciación Download PDF

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Publication number
ES2697804T5
ES2697804T5 ES15727042T ES15727042T ES2697804T5 ES 2697804 T5 ES2697804 T5 ES 2697804T5 ES 15727042 T ES15727042 T ES 15727042T ES 15727042 T ES15727042 T ES 15727042T ES 2697804 T5 ES2697804 T5 ES 2697804T5
Authority
ES
Spain
Prior art keywords
nucleic acid
sequences
template nucleic
molecular tag
acid molecules
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Active
Application number
ES15727042T
Other languages
English (en)
Spanish (es)
Other versions
ES2697804T3 (es
Inventor
Catherine Maree Burke
Aaron Earl Darling
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Illumina Singapore Pte Ltd
Original Assignee
Illumina Singapore Pte Ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Family has litigation
First worldwide family litigation filed litigation Critical https://patents.darts-ip.com/?family=51177418&utm_source=google_patent&utm_medium=platform_link&utm_campaign=public_patent_search&patent=ES2697804(T5) "Global patent litigation dataset” by Darts-ip is licensed under a Creative Commons Attribution 4.0 International License.
Application filed by Illumina Singapore Pte Ltd filed Critical Illumina Singapore Pte Ltd
Publication of ES2697804T3 publication Critical patent/ES2697804T3/es
Application granted granted Critical
Publication of ES2697804T5 publication Critical patent/ES2697804T5/es
Active legal-status Critical Current
Anticipated expiration legal-status Critical

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Classifications

    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
    • G16B25/20—Polymerase chain reaction [PCR]; Primer or probe design; Probe optimisation
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B50/00—ICT programming tools or database systems specially adapted for bioinformatics
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2563/00—Nucleic acid detection characterized by the use of physical, structural and functional properties
    • C12Q2563/179—Nucleic acid detection characterized by the use of physical, structural and functional properties the label being a nucleic acid
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2565/00—Nucleic acid analysis characterised by mode or means of detection
    • C12Q2565/50—Detection characterised by immobilisation to a surface
    • C12Q2565/514—Detection characterised by immobilisation to a surface characterised by the use of the arrayed oligonucleotides as identifier tags, e.g. universal addressable array, anti-tag or tag complement array

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Engineering & Computer Science (AREA)
  • Organic Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • General Health & Medical Sciences (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Molecular Biology (AREA)
  • Genetics & Genomics (AREA)
  • Analytical Chemistry (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Immunology (AREA)
  • Evolutionary Biology (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Medical Informatics (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Theoretical Computer Science (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Bioethics (AREA)
  • Databases & Information Systems (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
ES15727042T 2014-05-23 2015-05-22 Proceso de secuenciación Active ES2697804T5 (es)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
GBGB1409282.9A GB201409282D0 (en) 2014-05-23 2014-05-23 Sequencing process
PCT/GB2015/051518 WO2015177570A1 (en) 2014-05-23 2015-05-22 Sequencing process

Publications (2)

Publication Number Publication Date
ES2697804T3 ES2697804T3 (es) 2019-01-28
ES2697804T5 true ES2697804T5 (es) 2024-11-25

Family

ID=51177418

Family Applications (1)

Application Number Title Priority Date Filing Date
ES15727042T Active ES2697804T5 (es) 2014-05-23 2015-05-22 Proceso de secuenciación

Country Status (12)

Country Link
US (2) US11047002B2 (enExample)
EP (1) EP3146070B2 (enExample)
JP (1) JP6687605B2 (enExample)
KR (3) KR102363284B1 (enExample)
CN (2) CN107002120B (enExample)
AU (1) AU2015263055B2 (enExample)
CA (1) CA2949925A1 (enExample)
DK (1) DK3146070T5 (enExample)
ES (1) ES2697804T5 (enExample)
GB (1) GB201409282D0 (enExample)
SG (1) SG11201609754QA (enExample)
WO (1) WO2015177570A1 (enExample)

Families Citing this family (10)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP3465502B1 (en) 2016-05-26 2024-04-10 Becton, Dickinson and Company Molecular label counting adjustment methods
CN109906274B (zh) * 2016-11-08 2023-08-25 贝克顿迪金森公司 用于细胞标记分类的方法
CN109952612B (zh) 2016-11-08 2023-12-01 贝克顿迪金森公司 用于表达谱分类的方法
KR101798229B1 (ko) * 2016-12-27 2017-12-12 주식회사 천랩 전장 리보솜 rna 서열정보를 얻는 방법 및 상기 리보솜 rna 서열정보를 이용하여 미생물을 동정하는 방법
CN111108218B (zh) * 2017-09-20 2024-06-25 生命科技股份有限公司 使用压缩的分子标记的核酸序列数据检测融合的方法
CN111247589B (zh) * 2017-09-25 2025-06-03 贝克顿迪金森公司 免疫受体条形码错误校正
JP7208230B2 (ja) * 2017-10-09 2023-01-18 プソマーゲン， インコーポレイテッド 核酸配列を特性決定するための単一分子シーケンシング及び固有の分子識別子
JPWO2019132010A1 (ja) * 2017-12-28 2021-01-21 タカラバイオ株式会社 塩基配列における塩基種を推定する方法、装置及びプログラム
EP3620539A1 (en) 2018-08-10 2020-03-11 Tata Consultancy Services Limited Method and system for improving amplicon sequencing based taxonomic resolution of microbial communities
AU2019321208A1 (en) * 2018-08-13 2021-02-18 Illumina Singapore Pte. Ltd. Sequencing algorithm

Family Cites Families (14)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7094531B1 (en) * 1997-01-15 2006-08-22 Xzillion Gmbh Co. Nucleic acid sequencing
JP4403069B2 (ja) * 2002-08-12 2010-01-20 独立行政法人理化学研究所 クローニングおよび分析のためのｍＲＮＡの５’末端の使用方法
JP4413017B2 (ja) * 2004-01-15 2010-02-10 独立行政法人理化学研究所 クラスタリングプログラムおよびクラスタリング装置
CA2613248A1 (en) * 2005-06-23 2006-12-28 Keygene N.V. Improved strategies for sequencing complex genomes using high throughput sequencing technologies
KR20090034930A (ko) * 2006-06-30 2009-04-08 암비트 바이오사이언시즈 코포레이션 탐지 가능한 핵산 태그
JP2013514079A (ja) 2009-12-17 2013-04-25 キージーン・エン・フェー 制限酵素に基づく全ゲノムシーケンシング
EP2599877B1 (en) 2010-06-30 2017-09-27 BGI Genomics Co., Limited New pcr sequencing method and use thereof in hla genotyping
US9033273B2 (en) 2010-11-02 2015-05-19 Jonathan Edelson Integrated aircraft ground navigation control system
DK3246416T3 (da) 2011-04-15 2024-09-02 Univ Johns Hopkins Sikkert sekventeringssystem
SG194745A1 (en) * 2011-05-20 2013-12-30 Fluidigm Corp Nucleic acid encoding reactions
US11177020B2 (en) 2012-02-27 2021-11-16 The University Of North Carolina At Chapel Hill Methods and uses for molecular tags
EP4234713A3 (en) 2012-03-20 2024-02-14 University Of Washington Through Its Center For Commercialization Methods of lowering the error rate of massively parallel dna sequencing using duplex consensus sequencing
EP2841601B1 (en) 2012-04-24 2019-03-06 Gen9, Inc. Methods for sorting nucleic acids and multiplexed preparative in vitro cloning
EP2898071A4 (en) 2012-09-21 2016-07-20 Broad Inst Inc COMPOSITIONS AND METHODS FOR LONG-TERM LABORATORIES AND PREPARED END OF NUCLEIC ACIDS IN EMULSION DROPS

Also Published As

Publication number Publication date
CN107002120B (zh) 2022-08-09
KR20170012390A (ko) 2017-02-02
DK3146070T5 (en) 2019-01-21
KR20220025213A (ko) 2022-03-03
KR102864537B1 (ko) 2025-09-24
EP3146070B1 (en) 2018-09-26
US20210403991A1 (en) 2021-12-30
CA2949925A1 (en) 2015-11-26
KR102579902B1 (ko) 2023-09-18
CN107002120A (zh) 2017-08-01
US11047002B2 (en) 2021-06-29
SG11201609754QA (en) 2016-12-29
EP3146070B2 (en) 2024-07-31
GB201409282D0 (en) 2014-07-09
ES2697804T3 (es) 2019-01-28
KR102363284B1 (ko) 2022-02-15
JP6687605B2 (ja) 2020-04-22
JP2017517282A (ja) 2017-06-29
US20170183724A1 (en) 2017-06-29
DK3146070T3 (en) 2019-01-07
CN116072218A (zh) 2023-05-05
KR20230141873A (ko) 2023-10-10
AU2015263055A1 (en) 2016-12-08
AU2015263055B2 (en) 2020-12-03
WO2015177570A1 (en) 2015-11-26
EP3146070A1 (en) 2017-03-29

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