JP7292217B2 - 試料中のバベシア種の核酸の検出 - Google Patents

試料中のバベシア種の核酸の検出 Download PDF

Info

Publication number
JP7292217B2
JP7292217B2 JP2019567565A JP2019567565A JP7292217B2 JP 7292217 B2 JP7292217 B2 JP 7292217B2 JP 2019567565 A JP2019567565 A JP 2019567565A JP 2019567565 A JP2019567565 A JP 2019567565A JP 7292217 B2 JP7292217 B2 JP 7292217B2
Authority
JP
Japan
Prior art keywords
seq
sequence
target
amplification
oligomer
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Active
Application number
JP2019567565A
Other languages
English (en)
Japanese (ja)
Other versions
JP2020524495A5 (enExample
JP2020524495A (ja
Inventor
ヴァネッサ・ブレス
ディアナ・セルフ
ジェフリー・エム・リネン
Original Assignee
ジーイーエヌ-プローブ・インコーポレーテッド
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by ジーイーエヌ-プローブ・インコーポレーテッド filed Critical ジーイーエヌ-プローブ・インコーポレーテッド
Publication of JP2020524495A publication Critical patent/JP2020524495A/ja
Publication of JP2020524495A5 publication Critical patent/JP2020524495A5/ja
Application granted granted Critical
Publication of JP7292217B2 publication Critical patent/JP7292217B2/ja
Active legal-status Critical Current
Anticipated expiration legal-status Critical

Links

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/6893Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for protozoa
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6806Preparing nucleic acids for analysis, e.g. for polymerase chain reaction [PCR] assay
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/158Expression markers
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/16Primer sets for multiplex assays
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/166Oligonucleotides used as internal standards, controls or normalisation probes

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Analytical Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Engineering & Computer Science (AREA)
  • Biophysics (AREA)
  • Biochemistry (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
  • Physics & Mathematics (AREA)
  • Genetics & Genomics (AREA)
  • Immunology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Tropical Medicine & Parasitology (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
JP2019567565A 2017-06-07 2018-06-06 試料中のバベシア種の核酸の検出 Active JP7292217B2 (ja)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US201762516530P 2017-06-07 2017-06-07
US62/516,530 2017-06-07
US201762520793P 2017-06-16 2017-06-16
US62/520,793 2017-06-16
PCT/US2018/036214 WO2018226798A1 (en) 2017-06-07 2018-06-06 Detecting babesia species nucleic acid in a sample

Publications (3)

Publication Number Publication Date
JP2020524495A JP2020524495A (ja) 2020-08-20
JP2020524495A5 JP2020524495A5 (enExample) 2021-07-26
JP7292217B2 true JP7292217B2 (ja) 2023-06-16

Family

ID=62749221

Family Applications (1)

Application Number Title Priority Date Filing Date
JP2019567565A Active JP7292217B2 (ja) 2017-06-07 2018-06-06 試料中のバベシア種の核酸の検出

Country Status (6)

Country Link
US (3) US11667978B2 (enExample)
EP (2) EP3635140B1 (enExample)
JP (1) JP7292217B2 (enExample)
AU (2) AU2018281196B2 (enExample)
CA (1) CA3064603A1 (enExample)
WO (1) WO2018226798A1 (enExample)

Families Citing this family (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP7292217B2 (ja) * 2017-06-07 2023-06-16 ジーイーエヌ-プローブ・インコーポレーテッド 試料中のバベシア種の核酸の検出
TW202030333A (zh) * 2018-12-20 2020-08-16 美商簡 探針公司 用於檢測瘧原蟲物種核酸之組成物及方法
AU2020384888A1 (en) * 2019-11-14 2022-06-23 Gen-Probe Incorporated Compositions and methods for capturing target nucleic acids
KR102482020B1 (ko) * 2020-09-24 2022-12-27 주식회사 케어벳 실시간 중합효소 연쇄반응을 이용한 개 바베시아 검출세트 및 검출방법

Citations (8)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP2000135084A (ja) 1998-10-29 2000-05-16 National Institute Of Animal Health バベシア・オバタに特異的な塩基配列とそれを利用したバベシア・オバタの検出方法
US20030091598A1 (en) 2001-01-05 2003-05-15 Corixa Corporation Compounds and methods for the diagnosis and treatment of Babesia infection
US20120015360A1 (en) 2009-12-07 2012-01-19 Ibis Biosciences, Inc. Compositions for use in identification of babesia bioagents
CN103103286A (zh) 2013-03-05 2013-05-15 扬州大学 一种巴贝斯虫的荧光定量pcr检测和分型的引物、探针及试剂盒
US20150218657A1 (en) 2014-02-04 2015-08-06 Westchester Medical Center Advanced Physician Services, Pc Real-time pcr assay for detection of babesia microti and clinical utilization in diagnosis and treatment of babesiosis
WO2016064887A1 (en) 2014-10-20 2016-04-28 Gen-Probe Incorporated Red blood cell lysis solution
WO2016181297A1 (en) 2015-05-12 2016-11-17 Narodowy Instytut Zdrowia Publicznego - Państwowy Zakład Higieny Method of detection and/or identification of protozoa of genus babesia, primer for use in this method and kit for use in methods of diagnosis of symptomatic and asymptomatic babesiosis
WO2016183282A1 (en) 2015-05-12 2016-11-17 Gen-Probe Incorporated Method of pooling blood samples

Family Cites Families (58)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US4868A (en) 1846-12-03 Machinery for cutting screws
US105A (en) 1836-12-15 knight
FR2422956A1 (fr) 1978-04-13 1979-11-09 Pasteur Institut Procede de detection et de caracterisation d'un acide nucleique ou d'une sequence de celui-ci, et reactif enzymatique pour la mise en oeuvre de ce procede
US4786600A (en) 1984-05-25 1988-11-22 The Trustees Of Columbia University In The City Of New York Autocatalytic replication of recombinant RNA
US4683202A (en) 1985-03-28 1987-07-28 Cetus Corporation Process for amplifying nucleic acid sequences
US4683195A (en) 1986-01-30 1987-07-28 Cetus Corporation Process for amplifying, detecting, and/or-cloning nucleic acid sequences
US4868105A (en) 1985-12-11 1989-09-19 Chiron Corporation Solution phase nucleic acid sandwich assay
US5451506A (en) 1985-12-20 1995-09-19 Oncogen Limited Partnership Oncostatin M and novel compositions having anti-neoplastic activity
US4800159A (en) 1986-02-07 1989-01-24 Cetus Corporation Process for amplifying, detecting, and/or cloning nucleic acid sequences
EP0276302B1 (en) 1986-08-11 1993-04-28 Siska Diagnostics,Inc. Nucleic acid probe assay methods and compositions
US5541308A (en) 1986-11-24 1996-07-30 Gen-Probe Incorporated Nucleic acid probes for detection and/or quantitation of non-viral organisms
IL86724A (en) 1987-06-19 1995-01-24 Siska Diagnostics Inc Methods and kits for amplification and testing of nucleic acid sequences
FI891436L (fi) 1987-07-31 1989-03-23 Univ Leland Stanford Junior Selektivt flerfaldigande av targetpolynukleotidsekvenser.
US5283174A (en) 1987-09-21 1994-02-01 Gen-Probe, Incorporated Homogenous protection assay
US5585481A (en) 1987-09-21 1996-12-17 Gen-Probe Incorporated Linking reagents for nucleotide probes
US5639604A (en) 1987-09-21 1997-06-17 Gen-Probe Incorporated Homogeneous protection assay
WO1989002476A1 (en) 1987-09-21 1989-03-23 Ml Technology Ventures, L.P. Homogeneous protection assay
US5124246A (en) 1987-10-15 1992-06-23 Chiron Corporation Nucleic acid multimers and amplified nucleic acid hybridization assays using same
US5130238A (en) 1988-06-24 1992-07-14 Cangene Corporation Enhanced nucleic acid amplification process
US5118801A (en) 1988-09-30 1992-06-02 The Public Health Research Institute Nucleic acid process containing improved molecular switch
US5656207A (en) 1989-06-24 1997-08-12 Gen Probe Incorporated Detecting or quantifying multiple analytes using labelling techniques
US5516663A (en) 1990-01-26 1996-05-14 Abbott Laboratories Ligase chain reaction with endonuclease IV correction and contamination control
US5427930A (en) 1990-01-26 1995-06-27 Abbott Laboratories Amplification of target nucleic acids using gap filling ligase chain reaction
US5378825A (en) 1990-07-27 1995-01-03 Isis Pharmaceuticals, Inc. Backbone modified oligonucleotide analogs
US5849481A (en) 1990-07-27 1998-12-15 Chiron Corporation Nucleic acid hybridization assays employing large comb-type branched polynucleotides
US5846717A (en) 1996-01-24 1998-12-08 Third Wave Technologies, Inc. Detection of nucleic acid sequences by invader-directed cleavage
KR940703846A (ko) 1991-12-24 1994-12-12 비. 린네 파샬 갭(gap)이 형성된 2′ 변성된 올리고뉴클레오티드(gapped 2′ modifed oligonucleotides)
US5424413A (en) 1992-01-22 1995-06-13 Gen-Probe Incorporated Branched nucleic acid probes
CA2135073C (en) 1992-05-06 2002-11-19 Daniel L. Kacian Nucleic acid sequence amplification method, composition and kit
US5614402A (en) 1992-12-07 1997-03-25 Third Wave Technologies, Inc. 5' nucleases derived from thermostable DNA polymerase
US5422252A (en) 1993-06-04 1995-06-06 Becton, Dickinson And Company Simultaneous amplification of multiple targets
KR100189229B1 (ko) 1993-07-23 1999-06-01 다니엘 엘. 캐시앙, 헨리 엘. 노르호프 핵산 증폭을 강화하는 방법
US5925517A (en) 1993-11-12 1999-07-20 The Public Health Research Institute Of The City Of New York, Inc. Detectably labeled dual conformation oligonucleotide probes, assays and kits
US5648211A (en) 1994-04-18 1997-07-15 Becton, Dickinson And Company Strand displacement amplification using thermophilic enzymes
US5547861A (en) 1994-04-18 1996-08-20 Becton, Dickinson And Company Detection of nucleic acid amplification
AU2522095A (en) 1994-05-19 1995-12-18 Dako A/S Pna probes for detection of neisseria gonorrhoeae and chlamydia trachomatis
EP0709466B1 (en) 1994-10-28 2006-09-27 Gen-Probe Incorporated Compositions and methods for the simultaneous detection and quantification of multiple specific nucleic acid sequences
US6706471B1 (en) 1996-01-24 2004-03-16 Third Wave Technologies, Inc. Detection of nucleic acid sequences by invader-directed cleavage
CA2252048C (en) 1996-04-12 2008-03-11 The Public Health Research Institute Of The City Of New York, Inc. Detection probes, kits and assays
EP0975807B1 (en) 1997-05-02 2006-09-27 Gen-Probe Incorporated Two-step hybridization and capture of a polynucleotide
US6534273B2 (en) 1997-05-02 2003-03-18 Gen-Probe Incorporated Two-step hybridization and capture of a polynucleotide
US5823174A (en) 1997-08-21 1998-10-20 Andress; Alfonso G. Portable cooking device with vertically arranged hearth
US6180340B1 (en) 1997-10-31 2001-01-30 Gen-Probe Incorporated Extended dynamic range assays
US6949367B1 (en) 1998-04-03 2005-09-27 Epoch Pharmaceuticals, Inc. Modified oligonucleotides for mismatch discrimination
DK1080228T3 (da) * 1998-05-18 2010-08-16 Igenex Inc In situ hybridiseringsfremgangsmåde til detektering af target-nukleinsyrer
AU4001199A (en) 1998-05-21 1999-12-06 Igenex, Inc. Improved methods for detecting a target nucleic acid fragment
DE69941333D1 (de) 1998-07-02 2009-10-08 Gen Probe Inc Molekulare fackeln
CA2572472C (en) 2004-07-01 2013-08-13 Gen-Probe Incorporated Methods and compositions to detect nucleic acids in a biological sample
AU2005280162B2 (en) 2004-08-27 2012-04-26 Gen-Probe Incorporated Single-primer nucleic acid amplification methods
EP1853732A2 (en) 2005-02-28 2007-11-14 Gen-Probe Incorporated Compositions and methods of detecting an analyte by using a nucleic acid hybridization switch probe
CA2658105C (en) 2006-08-01 2016-07-05 Gen-Probe Incorporated Methods of nonspecific target capture of nucleic acids
CN102181556B (zh) 2011-04-15 2013-03-13 中国农业科学院兰州兽医研究所 用于检测马梨形虫的试剂盒及制备与使用方法
CN102230008B (zh) 2011-06-13 2013-03-20 河南科技大学 一种快速检测犬的巴贝西虫的pcr引物
US10167520B2 (en) 2011-12-06 2019-01-01 Scot E. Dowd Universal or broad range assays and multi-tag sample specific diagnostic process using non-optical sequencing
WO2014071946A1 (en) 2012-11-07 2014-05-15 Statens Serum Institut Diagnostic pcr primers enabling exhaustive detection of non-human eukaryotic ssu rdna in human clinical samples
WO2014197607A1 (en) * 2013-06-05 2014-12-11 The Regents Of The University Of California Detection of tick-borne diseases
AU2014312211A1 (en) 2013-08-28 2016-03-10 Caris Science, Inc. Oligonucleotide probes and uses thereof
JP7292217B2 (ja) * 2017-06-07 2023-06-16 ジーイーエヌ-プローブ・インコーポレーテッド 試料中のバベシア種の核酸の検出

Patent Citations (8)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP2000135084A (ja) 1998-10-29 2000-05-16 National Institute Of Animal Health バベシア・オバタに特異的な塩基配列とそれを利用したバベシア・オバタの検出方法
US20030091598A1 (en) 2001-01-05 2003-05-15 Corixa Corporation Compounds and methods for the diagnosis and treatment of Babesia infection
US20120015360A1 (en) 2009-12-07 2012-01-19 Ibis Biosciences, Inc. Compositions for use in identification of babesia bioagents
CN103103286A (zh) 2013-03-05 2013-05-15 扬州大学 一种巴贝斯虫的荧光定量pcr检测和分型的引物、探针及试剂盒
US20150218657A1 (en) 2014-02-04 2015-08-06 Westchester Medical Center Advanced Physician Services, Pc Real-time pcr assay for detection of babesia microti and clinical utilization in diagnosis and treatment of babesiosis
WO2016064887A1 (en) 2014-10-20 2016-04-28 Gen-Probe Incorporated Red blood cell lysis solution
WO2016181297A1 (en) 2015-05-12 2016-11-17 Narodowy Instytut Zdrowia Publicznego - Państwowy Zakład Higieny Method of detection and/or identification of protozoa of genus babesia, primer for use in this method and kit for use in methods of diagnosis of symptomatic and asymptomatic babesiosis
WO2016183282A1 (en) 2015-05-12 2016-11-17 Gen-Probe Incorporated Method of pooling blood samples

Also Published As

Publication number Publication date
US12404559B2 (en) 2025-09-02
US11667978B2 (en) 2023-06-06
AU2022209283A1 (en) 2022-10-20
EP3635140A1 (en) 2020-04-15
US20230227922A1 (en) 2023-07-20
WO2018226798A1 (en) 2018-12-13
US20210079485A1 (en) 2021-03-18
AU2018281196B2 (en) 2022-04-28
EP4276201A3 (en) 2024-01-17
EP4276201A2 (en) 2023-11-15
CA3064603A1 (en) 2018-12-13
US20250297329A1 (en) 2025-09-25
JP2020524495A (ja) 2020-08-20
AU2018281196A1 (en) 2020-01-30
EP3635140B1 (en) 2023-05-31

Similar Documents

Publication Publication Date Title
US12031187B2 (en) Kits for detecting bacterial nucleic acid
US12404559B2 (en) Detecting Babesia species nucleic acid in a sample
JP7601769B2 (ja) Plasmodium種核酸を検出するための組成物および方法
HK40052660B (en) Compositions and methods for detecting plasmodium species nucleic acid
HK40052660A (en) Compositions and methods for detecting plasmodium species nucleic acid
OA20793A (en) Compositions and methods for detecting plasmodium species nucleic acid.
HK40054528A (en) Kits for detecting bacterial nucleic acid and diagnosing bacterial vaginosis
HK40054528B (en) Kits for detecting bacterial nucleic acid and diagnosing bacterial vaginosis

Legal Events

Date Code Title Description
A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20210602

A621 Written request for application examination

Free format text: JAPANESE INTERMEDIATE CODE: A621

Effective date: 20210602

A131 Notification of reasons for refusal

Free format text: JAPANESE INTERMEDIATE CODE: A131

Effective date: 20220530

A601 Written request for extension of time

Free format text: JAPANESE INTERMEDIATE CODE: A601

Effective date: 20220830

A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20220915

A131 Notification of reasons for refusal

Free format text: JAPANESE INTERMEDIATE CODE: A131

Effective date: 20221205

A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20230214

TRDD Decision of grant or rejection written
A01 Written decision to grant a patent or to grant a registration (utility model)

Free format text: JAPANESE INTERMEDIATE CODE: A01

Effective date: 20230515

A61 First payment of annual fees (during grant procedure)

Free format text: JAPANESE INTERMEDIATE CODE: A61

Effective date: 20230606

R150 Certificate of patent or registration of utility model

Ref document number: 7292217

Country of ref document: JP

Free format text: JAPANESE INTERMEDIATE CODE: R150