JP6556705B2 - ポリヌクレオチドの分析 - Google Patents

ポリヌクレオチドの分析 Download PDF

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Publication number
JP6556705B2
JP6556705B2 JP2016519575A JP2016519575A JP6556705B2 JP 6556705 B2 JP6556705 B2 JP 6556705B2 JP 2016519575 A JP2016519575 A JP 2016519575A JP 2016519575 A JP2016519575 A JP 2016519575A JP 6556705 B2 JP6556705 B2 JP 6556705B2
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Japan
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polynucleotide
sequence
pattern
specific
labeling
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Japanese (ja)
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JP2016523533A5 (enExample
JP2016523533A (ja
Inventor
ハン カオ、
ハン カオ、
アレックス、 アール． ハスティ—、
アレックス、 アール． ハスティ―、
アーネスト、 チ‐ツン ラム、
アーネスト、 チ‐ツン ラム、
ジェリコ ジャクラ、
ジェリコ ジャクラ、
Original Assignee
バイオナノ ジェノミクス、 インコーポレイテッド
バイオナノ ジェノミクス、 インコーポレイテッド
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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/70—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving virus or bacteriophage
    • C12Q1/701—Specific hybridization probes
    • C12Q1/705—Specific hybridization probes for herpetoviridae, e.g. herpes simplex, varicella zoster
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6844—Nucleic acid amplification reactions
    • C12Q1/6858—Allele-specific amplification
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • C12Q1/6886—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material for cancer
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6888—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms
    • C12Q1/6893—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for detection or identification of organisms for protozoa
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G—PHYSICS
    • G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
    • G16B30/10—Sequence alignment; Homology search
    • Y—GENERAL TAGGING OF NEW TECHNOLOGICAL DEVELOPMENTS; GENERAL TAGGING OF CROSS-SECTIONAL TECHNOLOGIES SPANNING OVER SEVERAL SECTIONS OF THE IPC; TECHNICAL SUBJECTS COVERED BY FORMER USPC CROSS-REFERENCE ART COLLECTIONS [XRACs] AND DIGESTS
    • Y02—TECHNOLOGIES OR APPLICATIONS FOR MITIGATION OR ADAPTATION AGAINST CLIMATE CHANGE
    • Y02A—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE
    • Y02A50/00—TECHNOLOGIES FOR ADAPTATION TO CLIMATE CHANGE in human health protection, e.g. against extreme weather
    • Y02A50/30—Against vector-borne diseases, e.g. mosquito-borne, fly-borne, tick-borne or waterborne diseases whose impact is exacerbated by climate change

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  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • Physics & Mathematics (AREA)
  • Analytical Chemistry (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • General Health & Medical Sciences (AREA)
  • Biotechnology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Biophysics (AREA)
  • Immunology (AREA)
  • Genetics & Genomics (AREA)
  • Molecular Biology (AREA)
  • General Engineering & Computer Science (AREA)
  • Biochemistry (AREA)
  • Microbiology (AREA)
  • Evolutionary Biology (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Medical Informatics (AREA)
  • Theoretical Computer Science (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Pathology (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Virology (AREA)
  • Tropical Medicine & Parasitology (AREA)
  • Hospice & Palliative Care (AREA)
  • Oncology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
JP2016519575A 2013-06-10 2014-06-09 ポリヌクレオチドの分析 Active JP6556705B2 (ja)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US201361833378P 2013-06-10 2013-06-10
US61/833,378 2013-06-10
PCT/US2014/041568 WO2014200926A2 (en) 2013-06-10 2014-06-09 Analysis of polynucleotides

Publications (3)

Publication Number Publication Date
JP2016523533A JP2016523533A (ja) 2016-08-12
JP2016523533A5 JP2016523533A5 (enExample) 2017-07-27
JP6556705B2 true JP6556705B2 (ja) 2019-08-07

Family

ID=52022911

Family Applications (1)

Application Number Title Priority Date Filing Date
JP2016519575A Active JP6556705B2 (ja) 2013-06-10 2014-06-09 ポリヌクレオチドの分析

Country Status (5)

Country Link
US (1) US12442052B2 (enExample)
EP (1) EP3008216A4 (enExample)
JP (1) JP6556705B2 (enExample)
CN (1) CN105683393B (enExample)
WO (1) WO2014200926A2 (enExample)

Families Citing this family (10)

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Publication number Priority date Publication date Assignee Title
FR3049090B1 (fr) * 2016-03-21 2021-06-25 Sebastien Jean Serge Dupont Dispositif d'authentification biometrique adaptatif par echographie, photographies en lumiere visible de contraste et infrarouge, sans divulgation, a travers un reseau informatique decentralise
EP3885448B1 (en) * 2016-09-02 2023-03-22 New England Biolabs, Inc. Analysis of chromatin using a nicking enzyme
CN108728430B (zh) * 2017-04-21 2022-04-05 胤安国际（辽宁）基因科技股份有限公司 一种制备含有多个重复单元dna长探针的方法
US11505826B2 (en) * 2017-07-12 2022-11-22 Agilent Technologies, Inc. Sequencing method for genomic rearrangement detection
WO2019178273A1 (en) * 2018-03-13 2019-09-19 Guardant Health, Inc. Methods for the non-invasive detection and monitoring of therapeutic nucleic acid constructs
CN111378647A (zh) * 2018-12-27 2020-07-07 北京贝瑞和康生物技术有限公司 一种快速制备单分子光学图谱标记文库的方法和试剂盒
WO2021260644A1 (en) * 2020-06-25 2021-12-30 Perseus Biomics Kit and methods for characterizing a virus in a sample
WO2024145268A2 (en) 2022-12-25 2024-07-04 Bionano Genomics, Inc. Optical genome mapping cartridges
EP4639178A1 (en) 2022-12-25 2025-10-29 Bionano Genomics, Inc. Optical genome mapping system
EP4639177A1 (en) 2022-12-25 2025-10-29 Bionano Genomics, Inc. Instrumentation of optical genome mapping systems

Family Cites Families (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP2537925A1 (en) * 2005-08-04 2012-12-26 New England Biolabs, Inc. Novel restriction endonucleases, DNA encoding these endonucleases, and methods for identifying new endonucleases with the same or varied specificity
EP2207901B1 (en) * 2007-10-17 2018-07-25 Wisconsin Alumni Research Foundation Methods of whole genome analysis
US8524878B1 (en) * 2008-02-19 2013-09-03 Opgen, Inc. Methods of identifying an organism
WO2011050147A1 (en) * 2009-10-21 2011-04-28 Bionanomatrix, Inc . Methods and related devices for single molecule whole genome analysis
US8628919B2 (en) * 2008-06-30 2014-01-14 Bionano Genomics, Inc. Methods and devices for single-molecule whole genome analysis
US20100330557A1 (en) 2009-06-30 2010-12-30 Zohar Yakhini Genomic coordinate system
US20120283955A1 (en) * 2011-02-28 2012-11-08 Pathogenetix, Inc. Methods for data manipulation relating to polymer linear analysis

Also Published As

Publication number Publication date
EP3008216A4 (en) 2017-02-22
US20160201147A1 (en) 2016-07-14
WO2014200926A3 (en) 2015-03-12
CN105683393B (zh) 2020-08-07
CN105683393A (zh) 2016-06-15
US12442052B2 (en) 2025-10-14
EP3008216A2 (en) 2016-04-20
JP2016523533A (ja) 2016-08-12
WO2014200926A2 (en) 2014-12-18

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