JP6513949B2 - Vdj組み換え産物を特定する方法 - Google Patents

Vdj組み換え産物を特定する方法 Download PDF

Info

Publication number
JP6513949B2
JP6513949B2 JP2014559299A JP2014559299A JP6513949B2 JP 6513949 B2 JP6513949 B2 JP 6513949B2 JP 2014559299 A JP2014559299 A JP 2014559299A JP 2014559299 A JP2014559299 A JP 2014559299A JP 6513949 B2 JP6513949 B2 JP 6513949B2
Authority
JP
Japan
Prior art keywords
vdj
cell population
recombinant
product
dna
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Expired - Fee Related
Application number
JP2014559299A
Other languages
English (en)
Japanese (ja)
Other versions
JP2015509724A5 (https=
JP2015509724A (ja
Inventor
ウッド アンドリュー
ウッド アンドリュー
ボルランド ダニエル
ボルランド ダニエル
マトヘソン ロウイセ
マトヘソン ロウイセ
コルコラン アンネ
コルコラン アンネ
Original Assignee
ザ・バブラハム・インスティテュート
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by ザ・バブラハム・インスティテュート filed Critical ザ・バブラハム・インスティテュート
Publication of JP2015509724A publication Critical patent/JP2015509724A/ja
Publication of JP2015509724A5 publication Critical patent/JP2015509724A5/ja
Application granted granted Critical
Publication of JP6513949B2 publication Critical patent/JP6513949B2/ja
Expired - Fee Related legal-status Critical Current
Anticipated expiration legal-status Critical

Links

Images

Classifications

    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07KPEPTIDES
    • C07K16/00Immunoglobulins [IG], e.g. monoclonal or polyclonal antibodies
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6881Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for tissue or cell typing, e.g. human leukocyte antigen [HLA] probes
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/158Expression markers
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00Oligonucleotides characterized by their use
    • C12Q2600/16Primer sets for multiplex assays

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Health & Medical Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Genetics & Genomics (AREA)
  • Engineering & Computer Science (AREA)
  • Analytical Chemistry (AREA)
  • Immunology (AREA)
  • General Health & Medical Sciences (AREA)
  • Biophysics (AREA)
  • Molecular Biology (AREA)
  • Biochemistry (AREA)
  • General Engineering & Computer Science (AREA)
  • Biotechnology (AREA)
  • Microbiology (AREA)
  • Physics & Mathematics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Pathology (AREA)
  • Medicinal Chemistry (AREA)
  • Cell Biology (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Peptides Or Proteins (AREA)
JP2014559299A 2012-03-02 2013-03-01 Vdj組み換え産物を特定する方法 Expired - Fee Related JP6513949B2 (ja)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
GBGB1203720.6A GB201203720D0 (en) 2012-03-02 2012-03-02 Method of identifying VDJ recombination products
GB1203720.6 2012-03-02
PCT/GB2013/050516 WO2013128204A1 (en) 2012-03-02 2013-03-01 Method of identifying vdj recombination products

Publications (3)

Publication Number Publication Date
JP2015509724A JP2015509724A (ja) 2015-04-02
JP2015509724A5 JP2015509724A5 (https=) 2016-04-14
JP6513949B2 true JP6513949B2 (ja) 2019-05-22

Family

ID=46003032

Family Applications (1)

Application Number Title Priority Date Filing Date
JP2014559299A Expired - Fee Related JP6513949B2 (ja) 2012-03-02 2013-03-01 Vdj組み換え産物を特定する方法

Country Status (5)

Country Link
US (1) US9797014B2 (https=)
EP (1) EP2820153B1 (https=)
JP (1) JP6513949B2 (https=)
GB (1) GB201203720D0 (https=)
WO (1) WO2013128204A1 (https=)

Families Citing this family (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US10227655B2 (en) 2013-10-29 2019-03-12 Region Syddanmark Method for analyzing body fluid samples
US12043856B2 (en) 2016-05-24 2024-07-23 The Translational Genomics Research Institute Molecular tagging methods and sequencing libraries
CN108699554B (zh) * 2016-05-27 2019-11-01 深圳市海普洛斯生物科技有限公司 一种适用于超微量dna测序的接头及其应用
CN110234772B (zh) 2017-01-31 2024-01-19 路德维格癌症研究所有限公司 增强的免疫细胞受体测序方法
US20200131564A1 (en) * 2017-07-07 2020-04-30 Board Of Regents, The University Of Texas System High-coverage and ultra-accurate immune repertoire sequencing using molecular identifiers
CN112204155A (zh) * 2017-10-10 2021-01-08 纪念斯隆-凯特林癌症中心 引物提取和克隆性检测的系统和方法

Family Cites Families (7)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
FR2671356B1 (fr) * 1991-01-09 1993-04-30 Inst Nat Sante Rech Med Procede de description des repertoires d'anticorps (ab) et des recepteurs des cellules t (tcr) du systeme immunitaire d'un individu.
US6221600B1 (en) 1999-10-08 2001-04-24 Board Of Regents, The University Of Texas System Combinatorial oligonucleotide PCR: a method for rapid, global expression analysis
DE60334471D1 (de) 2002-10-11 2010-11-18 Univ Erasmus Primer für nukleinsäureamplifikation in pcr-basierten klonalitätsstudien
US8642513B2 (en) * 2005-09-15 2014-02-04 Crucell Holland B.V. Method for preparing immunoglobulin libraries
WO2008026927A2 (en) 2006-08-30 2008-03-06 Academisch Medisch Centrum Process for displaying t- and b-cell receptor repertoires
WO2011140433A2 (en) * 2010-05-07 2011-11-10 The Board Of Trustees Of The Leland Stanford Junior University Measurement and comparison of immune diversity by high-throughput sequencing
EP2625295B1 (en) * 2010-10-08 2019-03-13 President and Fellows of Harvard College High-throughput immune sequencing

Also Published As

Publication number Publication date
US9797014B2 (en) 2017-10-24
GB201203720D0 (en) 2012-04-18
US20150031042A1 (en) 2015-01-29
EP2820153A1 (en) 2015-01-07
JP2015509724A (ja) 2015-04-02
EP2820153B1 (en) 2018-12-05
WO2013128204A1 (en) 2013-09-06

Similar Documents

Publication Publication Date Title
US12247248B2 (en) Methods and kits for labeling cellular molecules
US11584959B2 (en) Compositions and methods for selection of nucleic acids
JP6324962B2 (ja) 標的rna枯渇化組成物を調製するための方法およびキット
Head et al. Library construction for next-generation sequencing: overviews and challenges
JP6513949B2 (ja) Vdj組み換え産物を特定する方法
KR20210114918A (ko) 복합체 표면-결합 트랜스포좀 복합체
JP2009508495A (ja) cDNAライブラリー調製
JP2018503403A (ja) 液相におけるライゲーションアッセイ
CN107075731A (zh) 一种核酸单链环状文库的构建方法和试剂
WO2022021279A1 (zh) 多种核酸共标记支持物及其制作方法与应用
JP2018506307A (ja) 非特異的増幅産物を減少させる為の方法及び組成物
US20220259653A1 (en) Dimer avoided multiplex polymerase chain reaction for amplification of multiple targets
CN104531874B (zh) Egfr基因突变检测方法及试剂盒
US20230183792A1 (en) Methods for the multiplexed isothermal amplification of nucleic acid sequences
US12577616B2 (en) Multiplex method of preparing a sequencing library
WO2024250155A1 (zh) 一种构建单细胞测序文库的方法
WO2025128786A1 (en) Methods for simultaneous characterization of genome and transcriptome of a single cell
Head et al. Practical Guide
HK40075118A (en) Methods for the multiplexed isothermal amplification of nucleic acid sequences
HK40075118B (en) Methods for the multiplexed isothermal amplification of nucleic acid sequences
US20180171398A1 (en) Improvements in and relating to nucleic acid probes and hybridisation methods
JP2005312442A (ja) マイクロビーズの精製方法
HK1243147B (zh) 一种核酸单链环状文库的构建方法和试剂
WO2005010184A1 (ja) 変異の検出方法
HK1221710B (zh) 一种基於分子反向探针的测序文库构建方法和试剂

Legal Events

Date Code Title Description
A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20150819

A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20160225

A621 Written request for application examination

Free format text: JAPANESE INTERMEDIATE CODE: A621

Effective date: 20160225

A131 Notification of reasons for refusal

Free format text: JAPANESE INTERMEDIATE CODE: A131

Effective date: 20161220

A601 Written request for extension of time

Free format text: JAPANESE INTERMEDIATE CODE: A601

Effective date: 20170215

A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20170619

A131 Notification of reasons for refusal

Free format text: JAPANESE INTERMEDIATE CODE: A131

Effective date: 20171003

A601 Written request for extension of time

Free format text: JAPANESE INTERMEDIATE CODE: A601

Effective date: 20171214

A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20180330

A131 Notification of reasons for refusal

Free format text: JAPANESE INTERMEDIATE CODE: A131

Effective date: 20180807

A601 Written request for extension of time

Free format text: JAPANESE INTERMEDIATE CODE: A601

Effective date: 20181101

A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20190205

TRDD Decision of grant or rejection written
A01 Written decision to grant a patent or to grant a registration (utility model)

Free format text: JAPANESE INTERMEDIATE CODE: A01

Effective date: 20190319

A61 First payment of annual fees (during grant procedure)

Free format text: JAPANESE INTERMEDIATE CODE: A61

Effective date: 20190411

R150 Certificate of patent or registration of utility model

Ref document number: 6513949

Country of ref document: JP

Free format text: JAPANESE INTERMEDIATE CODE: R150

LAPS Cancellation because of no payment of annual fees