JP5085837B2 - 末端リン酸標識ヌクレオチド及び使用方法 - Google Patents
末端リン酸標識ヌクレオチド及び使用方法 Download PDFInfo
- Publication number
- JP5085837B2 JP5085837B2 JP2003525684A JP2003525684A JP5085837B2 JP 5085837 B2 JP5085837 B2 JP 5085837B2 JP 2003525684 A JP2003525684 A JP 2003525684A JP 2003525684 A JP2003525684 A JP 2003525684A JP 5085837 B2 JP5085837 B2 JP 5085837B2
- Authority
- JP
- Japan
- Prior art keywords
- phosphoric acid
- phosphate
- nucleic acid
- group
- phosphatase
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Expired - Lifetime
Links
Classifications
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
- C07H19/00—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof
- C07H19/02—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof sharing nitrogen
- C07H19/04—Heterocyclic radicals containing only nitrogen atoms as ring hetero atom
- C07H19/06—Pyrimidine radicals
- C07H19/10—Pyrimidine radicals with the saccharide radical esterified by phosphoric or polyphosphoric acids
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
- C07H19/00—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof
- C07H19/02—Compounds containing a hetero ring sharing one ring hetero atom with a saccharide radical; Nucleosides; Mononucleotides; Anhydro-derivatives thereof sharing nitrogen
- C07H19/04—Heterocyclic radicals containing only nitrogen atoms as ring hetero atom
- C07H19/16—Purine radicals
- C07H19/20—Purine radicals with the saccharide radical esterified by phosphoric or polyphosphoric acids
-
- C—CHEMISTRY; METALLURGY
- C07—ORGANIC CHEMISTRY
- C07H—SUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
- C07H21/00—Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids
-
- C—CHEMISTRY; METALLURGY
- C09—DYES; PAINTS; POLISHES; NATURAL RESINS; ADHESIVES; COMPOSITIONS NOT OTHERWISE PROVIDED FOR; APPLICATIONS OF MATERIALS NOT OTHERWISE PROVIDED FOR
- C09B—ORGANIC DYES OR CLOSELY-RELATED COMPOUNDS FOR PRODUCING DYES, e.g. PIGMENTS; MORDANTS; LAKES
- C09B11/00—Diaryl- or thriarylmethane dyes
- C09B11/04—Diaryl- or thriarylmethane dyes derived from triarylmethanes, i.e. central C-atom is substituted by amino, cyano, alkyl
- C09B11/10—Amino derivatives of triarylmethanes
- C09B11/24—Phthaleins containing amino groups ; Phthalanes; Fluoranes; Phthalides; Rhodamine dyes; Phthaleins having heterocyclic aryl rings; Lactone or lactame forms of triarylmethane dyes
-
- C—CHEMISTRY; METALLURGY
- C09—DYES; PAINTS; POLISHES; NATURAL RESINS; ADHESIVES; COMPOSITIONS NOT OTHERWISE PROVIDED FOR; APPLICATIONS OF MATERIALS NOT OTHERWISE PROVIDED FOR
- C09B—ORGANIC DYES OR CLOSELY-RELATED COMPOUNDS FOR PRODUCING DYES, e.g. PIGMENTS; MORDANTS; LAKES
- C09B15/00—Acridine dyes
-
- C—CHEMISTRY; METALLURGY
- C09—DYES; PAINTS; POLISHES; NATURAL RESINS; ADHESIVES; COMPOSITIONS NOT OTHERWISE PROVIDED FOR; APPLICATIONS OF MATERIALS NOT OTHERWISE PROVIDED FOR
- C09B—ORGANIC DYES OR CLOSELY-RELATED COMPOUNDS FOR PRODUCING DYES, e.g. PIGMENTS; MORDANTS; LAKES
- C09B19/00—Oxazine dyes
-
- C—CHEMISTRY; METALLURGY
- C09—DYES; PAINTS; POLISHES; NATURAL RESINS; ADHESIVES; COMPOSITIONS NOT OTHERWISE PROVIDED FOR; APPLICATIONS OF MATERIALS NOT OTHERWISE PROVIDED FOR
- C09B—ORGANIC DYES OR CLOSELY-RELATED COMPOUNDS FOR PRODUCING DYES, e.g. PIGMENTS; MORDANTS; LAKES
- C09B57/00—Other synthetic dyes of known constitution
- C09B57/02—Coumarine dyes
-
- C—CHEMISTRY; METALLURGY
- C09—DYES; PAINTS; POLISHES; NATURAL RESINS; ADHESIVES; COMPOSITIONS NOT OTHERWISE PROVIDED FOR; APPLICATIONS OF MATERIALS NOT OTHERWISE PROVIDED FOR
- C09B—ORGANIC DYES OR CLOSELY-RELATED COMPOUNDS FOR PRODUCING DYES, e.g. PIGMENTS; MORDANTS; LAKES
- C09B69/00—Dyes not provided for by a single group of this subclass
- C09B69/10—Polymeric dyes; Reaction products of dyes with monomers or with macromolecular compounds
- C09B69/109—Polymeric dyes; Reaction products of dyes with monomers or with macromolecular compounds containing other specific dyes
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6813—Hybridisation assays
- C12Q1/6816—Hybridisation assays characterised by the detection means
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6844—Nucleic acid amplification reactions
- C12Q1/6851—Quantitative amplification
Applications Claiming Priority (5)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
US31579801P | 2001-08-29 | 2001-08-29 | |
US60/315,798 | 2001-08-29 | ||
US10/113,030 | 2002-04-01 | ||
US10/113,030 US7052839B2 (en) | 2001-08-29 | 2002-04-01 | Terminal-phosphate-labeled nucleotides and methods of use |
PCT/US2002/027563 WO2003020984A2 (en) | 2001-08-29 | 2002-08-29 | Terminal-phosphate-labeled nucleotides and methods of use |
Publications (3)
Publication Number | Publication Date |
---|---|
JP2005501567A JP2005501567A (ja) | 2005-01-20 |
JP2005501567A5 JP2005501567A5 (US07052839-20060530-C00012.png) | 2012-08-30 |
JP5085837B2 true JP5085837B2 (ja) | 2012-11-28 |
Family
ID=26810639
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
JP2003525684A Expired - Lifetime JP5085837B2 (ja) | 2001-08-29 | 2002-08-29 | 末端リン酸標識ヌクレオチド及び使用方法 |
Country Status (6)
Families Citing this family (79)
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WO2002004680A2 (en) * | 2000-07-07 | 2002-01-17 | Visigen Biotechnologies, Inc. | Real-time sequence determination |
US7211414B2 (en) * | 2000-12-01 | 2007-05-01 | Visigen Biotechnologies, Inc. | Enzymatic nucleic acid synthesis: compositions and methods for altering monomer incorporation fidelity |
US7560254B2 (en) | 2001-08-29 | 2009-07-14 | Ge Healthcare Bio-Sciences Corp. | Allele specific primer extension |
JP4318296B2 (ja) * | 2001-08-29 | 2009-08-19 | ジーイー・ヘルスケア・バイオサイエンス・コーポレイション | 標識ヌクレオシドポリホスフェート |
US7727722B2 (en) * | 2001-08-29 | 2010-06-01 | General Electric Company | Ligation amplification |
US7244566B2 (en) | 2001-08-29 | 2007-07-17 | Ge Healthcare Bio-Sciences Corp. | Analyte detection |
US7033762B2 (en) * | 2001-08-29 | 2006-04-25 | Amersham Biosciences Corp | Single nucleotide amplification and detection by polymerase |
AU2003263025B2 (en) * | 2002-08-29 | 2009-06-18 | Global Life Sciences Solutions Usa Llc | Analyte detection |
WO2004020604A2 (en) * | 2002-08-29 | 2004-03-11 | Amersham Biosciences Corp | Allele specific primer extension |
AU2003263023B2 (en) * | 2002-08-29 | 2008-09-11 | Global Life Sciences Solutions Usa Llc | Terminal phosphate blocked nucleoside polyphosphates |
WO2004072304A1 (en) * | 2003-02-05 | 2004-08-26 | Amersham Biosciences Corp | Nucleic acid amplification |
EP1592779A4 (en) * | 2003-02-05 | 2007-12-12 | Ge Healthcare Bio Sciences | NUCLEOTIDES BRANDED BY TERMINAL PHOSPHATES, HAVING NEW LINKS |
WO2004071155A2 (en) * | 2003-02-05 | 2004-08-26 | Amersham Biosciences Corp | Solid phase sequencing |
ES2297402T3 (es) * | 2003-04-17 | 2008-05-01 | The American National Red Cross | Substratos fluorescentes que permiten detectar una actividad de la enzima organofosfatasa. |
EP2371927B1 (en) * | 2004-09-16 | 2020-03-11 | Life Technologies Corporation | Fluorescent dye compounds, conjugates and uses thereof |
US7805081B2 (en) * | 2005-08-11 | 2010-09-28 | Pacific Biosciences Of California, Inc. | Methods and systems for monitoring multiple optical signals from a single source |
US7405281B2 (en) * | 2005-09-29 | 2008-07-29 | Pacific Biosciences Of California, Inc. | Fluorescent nucleotide analogs and uses therefor |
US7715001B2 (en) * | 2006-02-13 | 2010-05-11 | Pacific Biosciences Of California, Inc. | Methods and systems for simultaneous real-time monitoring of optical signals from multiple sources |
US7692783B2 (en) * | 2006-02-13 | 2010-04-06 | Pacific Biosciences Of California | Methods and systems for simultaneous real-time monitoring of optical signals from multiple sources |
US7995202B2 (en) | 2006-02-13 | 2011-08-09 | Pacific Biosciences Of California, Inc. | Methods and systems for simultaneous real-time monitoring of optical signals from multiple sources |
US8889348B2 (en) * | 2006-06-07 | 2014-11-18 | The Trustees Of Columbia University In The City Of New York | DNA sequencing by nanopore using modified nucleotides |
US8207509B2 (en) | 2006-09-01 | 2012-06-26 | Pacific Biosciences Of California, Inc. | Substrates, systems and methods for analyzing materials |
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US20080080059A1 (en) * | 2006-09-28 | 2008-04-03 | Pacific Biosciences Of California, Inc. | Modular optical components and systems incorporating same |
US20080277595A1 (en) * | 2007-05-10 | 2008-11-13 | Pacific Biosciences Of California, Inc. | Highly multiplexed confocal detection systems and methods of using same |
US20100167413A1 (en) * | 2007-05-10 | 2010-07-01 | Paul Lundquist | Methods and systems for analyzing fluorescent materials with reduced autofluorescence |
AU2009223702B2 (en) | 2008-03-13 | 2013-08-22 | Pacific Biosciences Of California, Inc. | Labeled reactants and their uses |
US7973146B2 (en) * | 2008-03-26 | 2011-07-05 | Pacific Biosciences Of California, Inc. | Engineered fluorescent dye labeled nucleotide analogs for DNA sequencing |
US20100227327A1 (en) * | 2008-08-08 | 2010-09-09 | Xiaoliang Sunney Xie | Methods and compositions for continuous single-molecule nucleic acid sequencing by synthesis with fluorogenic nucleotides |
US20100036110A1 (en) * | 2008-08-08 | 2010-02-11 | Xiaoliang Sunney Xie | Methods and compositions for continuous single-molecule nucleic acid sequencing by synthesis with fluorogenic nucleotides |
CA3063032A1 (en) | 2008-09-16 | 2010-03-25 | Pacific Biosciences Of California, Inc. | Substrates and optical systems and methods of use thereof |
WO2010059206A2 (en) * | 2008-11-19 | 2010-05-27 | Pacific Biosciences Of California, Inc. | Modular nucleotide compositions and uses therefor |
US8236532B2 (en) | 2008-12-23 | 2012-08-07 | Illumina, Inc. | Multibase delivery for long reads in sequencing by synthesis protocols |
US8603792B2 (en) | 2009-03-27 | 2013-12-10 | Life Technologies Corporation | Conjugates of biomolecules to nanoparticles |
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US8632975B2 (en) | 2009-06-05 | 2014-01-21 | Life Technologies Corporation | Nucleotide transient binding for sequencing methods |
US8518643B2 (en) * | 2010-02-04 | 2013-08-27 | Pacific Biosciences Of California, Inc. | Method to improve single molecule analyses |
US20110192723A1 (en) * | 2010-02-08 | 2011-08-11 | Genia Technologies, Inc. | Systems and methods for manipulating a molecule in a nanopore |
US9678055B2 (en) | 2010-02-08 | 2017-06-13 | Genia Technologies, Inc. | Methods for forming a nanopore in a lipid bilayer |
US8324914B2 (en) | 2010-02-08 | 2012-12-04 | Genia Technologies, Inc. | Systems and methods for characterizing a molecule |
US9605307B2 (en) | 2010-02-08 | 2017-03-28 | Genia Technologies, Inc. | Systems and methods for forming a nanopore in a lipid bilayer |
US8906612B2 (en) | 2010-08-25 | 2014-12-09 | Pacific Biosciences Of California, Inc. | Scaffold-based polymerase enzyme substrates |
US9938590B2 (en) | 2010-09-16 | 2018-04-10 | Gen-Probe Incorporated | Capture probes immobilizable via L-nucleotide tail |
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US9255293B2 (en) | 2010-11-01 | 2016-02-09 | Gen-Probe Incorporated | Integrated capture and amplification of target nucleic acid for sequencing |
US8845880B2 (en) | 2010-12-22 | 2014-09-30 | Genia Technologies, Inc. | Nanopore-based single DNA molecule characterization, identification and isolation using speed bumps |
US8962242B2 (en) | 2011-01-24 | 2015-02-24 | Genia Technologies, Inc. | System for detecting electrical properties of a molecular complex |
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US9315864B2 (en) | 2012-05-18 | 2016-04-19 | Pacific Biosciences Of California, Inc. | Heteroarylcyanine dyes with sulfonic acid substituents |
US10458915B2 (en) | 2012-05-18 | 2019-10-29 | Pacific Biosciences Of California, Inc. | Heteroarylcyanine dyes |
JP2015525077A (ja) | 2012-06-15 | 2015-09-03 | ジェニア・テクノロジーズ・インコーポレイテッド | チップの構成および高精度な核酸配列決定 |
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WO2002004680A2 (en) * | 2000-07-07 | 2002-01-17 | Visigen Biotechnologies, Inc. | Real-time sequence determination |
AU3922802A (en) | 2000-10-02 | 2002-05-27 | Keck Graduate Inst | Methods for identifying nucleotides at defined positions in target nucleic acidsusing fluorescence polarization |
US7033762B2 (en) | 2001-08-29 | 2006-04-25 | Amersham Biosciences Corp | Single nucleotide amplification and detection by polymerase |
JP4318296B2 (ja) | 2001-08-29 | 2009-08-19 | ジーイー・ヘルスケア・バイオサイエンス・コーポレイション | 標識ヌクレオシドポリホスフェート |
-
2002
- 2002-04-01 US US10/113,030 patent/US7052839B2/en not_active Expired - Lifetime
- 2002-08-29 WO PCT/US2002/027563 patent/WO2003020984A2/en active Application Filing
- 2002-08-29 CA CA2457754A patent/CA2457754C/en not_active Expired - Lifetime
- 2002-08-29 EP EP02759493A patent/EP1421212A2/en not_active Ceased
- 2002-08-29 CA CA2774344A patent/CA2774344C/en not_active Expired - Lifetime
- 2002-08-29 JP JP2003525684A patent/JP5085837B2/ja not_active Expired - Lifetime
- 2002-08-29 AU AU2002324825A patent/AU2002324825B2/en not_active Expired
Also Published As
Publication number | Publication date |
---|---|
JP2005501567A (ja) | 2005-01-20 |
WO2003020984A2 (en) | 2003-03-13 |
CA2774344A1 (en) | 2003-03-13 |
US7052839B2 (en) | 2006-05-30 |
CA2774344C (en) | 2018-10-16 |
CA2457754C (en) | 2012-06-19 |
US20030077610A1 (en) | 2003-04-24 |
CA2457754A1 (en) | 2003-03-13 |
EP1421212A2 (en) | 2004-05-26 |
WO2003020984A3 (en) | 2003-12-11 |
AU2002324825B2 (en) | 2007-11-01 |
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