JP2022081575A - ホスホロチオエート化オリゴデオキシヌクレオチドを含む化合物及び組成物、ならびにその使用方法 - Google Patents
ホスホロチオエート化オリゴデオキシヌクレオチドを含む化合物及び組成物、ならびにその使用方法 Download PDFInfo
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Abstract
Description
本出願は、2015年10月15日に出願された米国仮出願第62/242,189号の利益を主張するものであり、その全体があらゆる目的のために参照により本明細書に組み込まれる。
2016年10月14日に作成され、15,873バイトのサイズの48440-588001WO_ST25.TXTという名称のtxtファイルの内容は、参照によりその全体が本明細書に組み込まれる。
以下の定義は、本主題の理解及び添付の特許請求の範囲の構成の目的のために含まれる。本明細書で使用される略語は、化学的及び生物学的な技術分野内でのそれらの従来の意味を有する。
1 cgctggcgac gggacattat tacttttggt acgcgctgtg acacttcaaa ctcgtaccgt 61 gagtaataat gcgccgtcca cggca (配列番号37)。
1 gacagtgcag tcacccataa agtagaaagc actactaaca gcactggagg gtgtagtgtt
61 tcctacttta tggatgagtg tactgtg (配列番号38)。
1 ctgttaatgc taatcgtgat aggggttttt gcctccaact gactcctaca tattagcatt
61 aacag (配列番号39)。
1 cggggttggt tgttatcttt ggttatctag ctgtatgagt ggtgtggagt cttcataaag
61 ctagataacc gaaagtaaaa ataacccca (配列番号40);
1 ggaggcccgt ttctctcttt ggttatctag ctgtatgagt gccacagagc cgtcataaag
61 ctagataacc gaaagtagaa atgattctca (配列番号41)。
1 ccagaggttg taacgttgtc tatatatacc ctgtagaacc gaatttgtgt ggtatccgta
61 tagtcacaga ttcgattcta ggggaatata tggtcgatgc aaaaacttca (配列番号42)。
1 tgtcgggtag cttatcagac tgatgttgac tgttgaatct catggcaaca ccagtcgatg
61 ggctgtctga ca (配列番号43)。
1 gtcagaataa tgtcaaagtg cttacagtgc aggtagtgat atgtgcatct actgcagtga
61 aggcacttgt agcattatgg tgac (配列番号44)。
1 ctttctacac aggttgggat cggttgcaat gctgtgtttc tgtatggtat tgcacttgtc
61 ccggcctgtt gagtttgg (配列番号45)。
1 tgcgctcctc tcagtccctg agaccctaac ttgtgatgtt taccgtttaa atccacgggt
61 taggctcttg ggagctgcga gtcgtgct (配列番号46)。
1 ccgatgtgta tcctcagctt tgagaactga attccatggg ttgtgtcagt gtcagacctc
61 tgaaattcag ttcttcagct gggatatctc tgtcatcgt (配列番号47)。
(A)オキソ、ハロゲン、-CF3、-CN、-OH、-NH2、-COOH、-CONH2、-NO2、-SH、-SO2Cl、-SO3H、-SO4H、-SO2NH2、NHNH2、ONH2、NHC=(O)NHNH2、-NHC=(O)NH2、-NHSO2H、-NHC=(O)H、-NHC(O)-OH、-NHOH、-OCF3、-OCHF2、-NHSO2CH3、-N3、非置換のアルキル、非置換のヘテロアルキル、非置換のシクロアルキル、非置換のヘテロシクロアルキル、非置換のアリール、非置換のヘテロアリールと、
(B)(i)オキソ、ハロゲン、-CF3、-CN、-OH、-NH2、-COOH、-CONH2、-NO2、-SH、-SO2Cl、-SO3H、-SO4H、-SO2NH2、NHNH2、-ONH2、-NHC=(O)NHNH2、-NHC=(O)NH2、-NHSO2H、-NHC=(O)H、-NHC(O)-OH、-NHOH、-OCF3、-OCHF2、-NHSO2CH3、-N3、非置換のアルキル、非置換のヘテロアルキル、非置換のシクロアルキル、非置換のヘテロシクロアルキル、非置換のアリール、非置換のヘテロアリール、及び
(ii)以下から選択される少なくとも1つの置換基で置換されたアルキル、ヘテロアルキル、シクロアルキル、ヘテロシクロアルキル、アリール、ヘテロアリール:
(a)オキソ、ハロゲン、-CF3、-CN、-OH、-NH2、-COOH、-CONH2、-NO2、-SH、-SO2Cl、-SO3H、-SO4H、-SO2NH2、NHNH2、-ONH2、-NHC=(O)NHNH2、-NHC=(O)NH2、-NHSO2H、-NHC=(O)H、-NHC(O)-OH、-NHOH、-OCF3、-OCHF2、-NHSO2CH3、-N3、非置換アルキル、非置換ヘテロアルキル、非置換シクロアルキル、非置換ヘテロシクロアルキル、非置換アリール、非置換ヘテロアリールと、
(b)オキソ、ハロゲン、-CF3、-CN、-OH、-NH2、-COOH、-CONH2、-NO2、-SH、-SO2Cl、-SO3H、-SO4H、-SO2NH2、-NHNH2、-ONH2、-NHC=(O)NHNH2、-NHC=(O)NH2、-NHSO2H、-NHC=(O)H、-NHC(O)-OH、-NHOH、-OCF3、-OCHF2、NHSO2CH3、-N3、非置換のアルキル、非置換のヘテロアルキル、非置換のシクロアルキル、非置換のヘテロシクロアルキル、非置換のアリール、非置換のヘテロアリールから選択される少なくとも1つの置換基で置換されたアルキル、ヘテロアルキル、シクロアルキル、ヘテロシクロアルキル、アリール、ヘテロアリールと、から選択される少なくとも1つの置換基で置換されたアルキル、ヘテロアルキル、シクロアルキル、ヘテロシクロアルキル、アリール、ヘテロアリール。
一態様において、抗マイクロRNA(抗miR)またはマイクロRNA(miRNA)擬態核酸配列(miRNA-ミミック)に抱合されたホスホロチオエ-ト化CpGオリゴデオキシヌクレオチド(CpG-ODN)を含む化合物が本明細書で提供される。実施形態において、CpG-ODNは、15~30個の塩基(核酸塩基)長の、一本鎖の、部分的または完全にホスホロチオエ-ト化されたオリゴデオキシヌクレオチドである。
-(CH2)n-PO4-[(CH2)n-PO4]z-(CH2)n-を有する部分であるか、またはこれを含有する。
一態様では、薬学的に許容される賦形剤と、本明細書に開示される化合物とを含む医薬組成物が本明細書に提供される。実施形態において、本組成物は、第2の治療薬を含む。実施形態において、第2の治療薬は、抗腫瘍もしくは抗癌剤、血管新生阻害剤、細胞傷害性薬剤、細胞増殖抑制剤、抗炎症剤、鎮痛剤、抗感染症薬、増殖阻害剤、免疫原性薬剤、免疫調節剤、またはケモカインである。実施形態において、本開示の医薬生成物中の抗腫瘍もしくは抗癌剤は、細胞死促進剤である。
疾患の治療方法を、それを必要とする対象において施す方法が、本明細書で提供され、本方法は、化合物または本明細書に開示される化合物を含む医薬組成物の有効量を対象に投与することを含む。実施形態において、疾患は、がん、自己免疫疾患、または感染性疾患である。
NHSエステル及びジビニルスルホンならびにその類似体と反応することにより、官能基化にさらに使用され得る、FmovアミノモディファイヤーC6 dT(アミノ基の導入)
CpG-抗miR155:
5’G*G*TGCATCGATGCAGG*G*G*G*G(配列番号1)xxxxxmA*mC*mC*mC*mC*mU*mA*mU*mC*mA*mC*mA*mA*mU*mU*mA*mG*mC*mA*mU*mU*mA*mA(配列番号28)3’;
CpG-抗miR125b:
5’G*G*TGCATCGATGCAGG*G*G*G*G(配列番号1)xxxxxmU*mC*mA*mC*mA*mA*mG*mU*mU*mA*mG*mG*mG*mU*mC*mU*mC*mA*mG*mG*mG*mA(配列番号34)3’;及び
CpG-抗miR146a:
5’G*G*TGCATCGATGCAGG*G*G*G*G(配列番号1)xxxxxmC*mC*mC*mA*mU*mG*mG*mA*mA*mU*mU*mC*mA*mG*mU*mU*mC*mU*mC*mA(配列番号36)3’であり、
式中、*は、ホスホロチオエート結合を示し、mNは、2’OMe修飾ヌクレオチドを示し、xは、本明細書に記載されるリンカーを示す。
CpG-抗miRNAをCy3標識して、フローサイトメトリーを用いて、標的細胞による細胞内取り込みを検出した。ヒト免疫細胞を、指示した濃度のCpG-抗miR146a、CpG-抗miR155またはCpG-抗miR125bとインキュベートして、これらの化合物の取り込みを細胞中で観察した(図16A~16B、17A~17F、18A~18F、19A~19H)。これらの化合物の処置は、ヒト及びマウス骨髄性細胞中の対応するmiR発現を低減した(図17A~17F、18A~18F、19A~19H)。
本開示が、その詳細な説明と併せて説明されてきたが、前述の説明は例示を意図しており、本開示の範囲を限定することを意図するものではなく、本開示の範囲は、添付の特許請求項の範囲によって規定されている。他の態様、利点、及び修正は、以下の請求項の範囲内である。
Claims (47)
- 抗マイクロRNA(抗miR)核酸配列に抱合されているか、またはマイクロRNA(miRNA)擬態核酸配列(miRNA-ミミック)に抱合されているホスホロチオエート化CpGオリゴデオキシヌレオチド(CpG-ODN)を含む、化合物。
- 前記抗miR核酸配列が、抗miR126核酸配列、抗miR142核酸配列、抗miR155核酸配列、抗miR9核酸配列、抗miR10b核酸配列、抗miR21核酸配列、抗miR17核酸配列、抗miR92核酸配列、抗miR125b核酸配列、または抗miR146a核酸配列である、請求項1に記載の化合物。
- 前記擬態核酸配列が、miR126-ミミック核酸配列、miR142-ミミック核酸配列、miR155-ミミック核酸配列、miR9-ミミック核酸配列、miR10b-ミミック核酸配列、miR21-ミミック核酸配列、miR17-ミミック核酸配列、miR92-ミミック核酸配列、miR125b-ミミック核酸配列、またはmiR146a-ミミック核酸配列である、請求項1に記載の化合物。
- 前記CpG-ODNと、それぞれ抗miR核酸配列またはmiRNA-ミミック核酸配列との間に共有結合リンカーをさらに含む、請求項1~3のいずれか一項に記載の化合物。
- 前記リンカーが、置換もしくは非置換のアルキレン、置換もしくは非置換のヘテロアルキレン、置換もしくは非置換のシクロアルキレン、置換もしくは非置換のヘテロシクロアルキレン、置換もしくは非置換のアリーレン、または置換もしくは非置換のヘテロアリーレンである、請求項4に記載の化合物。
- 前記リンカーが、置換もしくは非置換のC1~C40アルキレン、置換もしくは非置換の2~40員のヘテロアルキレン、置換もしくは非置換のC3~C8シクロアルキレン、置換もしくは非置換の3~8員のヘテロシクロアルキレン、置換もしくは非置換のC6~C10アリーレン、または置換もしくは非置換の5~10員のヘテロアリーレンである、請求項4に記載の化合物。
- 前記リンカーが、非置換のC1~C40アルキレン、非置換の2~40員のヘテロアルキレン、非置換のC3~C8シクロアルキレン、非置換の3~8員のヘテロシクロアルキレン、非置換のC6~C10アリーレン、または非置換の5~10員のヘテロアリーレンである、請求項4に記載の化合物。
- 前記リンカーが、置換2~40員のヘテロアルキレンである、請求項4に記載の化合物。
- 前記抗miR核酸配列またはmiRNA-ミミック核酸配列が、それぞれ、化学的に修飾されている、請求項1~8のいずれか一項に記載の化合物。
- 前記抗miR核酸配列またはmiRNA-ミミック核酸配列が、それぞれ、2’O-メチル、2’-デオキシ-2’-フルオロ、2’-デオキシ、ユニバーサル塩基、5-C-メチル、逆位デオキシ脱塩基残基結合、及びロックド核酸からなる群から選択される化学修飾を含む、請求項9に記載の化合物。
- 前記修飾が、前記抗miR核酸配列またはmiRNA-ミミック核酸配列の末端核酸塩基に、それぞれ位置している、請求項10に記載の化合物。
- 前記修飾が、前記抗miR核酸配列またはmiRNA-ミミック核酸配列の前記末端核酸塩基には、それぞれ位置していない、請求項10に記載の化合物。
- 前記修飾が、血清由来のヌクレアーゼに対して保護する、請求項10に記載の化合物。
- 前記CpG-ODN核酸配列が、クラスACpG-ODN核酸配列、クラスBCpG-ODN核酸配列、及びクラスCCpG-ODN核酸配列からなる群から選択される、請求項1に記載の化合物。
- 前記CpG-ODNが、ホスホロアミデート結合、ホスホロジアミデート結合、ホスホロジチオエート結合、ホスホノカルボン酸結合、ホスホノカルボキシレート結合、ホスホノ酢酸結合、ホスホノギ酸結合、メチルホスホネート結合、ホウ素ホスホネート結合、及びO-メチルホスホロアミダイト結合からなる群から選択されるホスホジエステル誘導体結合を含む、請求項1に記載の化合物。
- 抗マイクロRNA(抗miR)核酸配列を含む化合物であって、前記抗miR核酸配列が、1つ以上のホスホロチオエート結合と、1つ以上の化学的に修飾されたヌクレオチドとを含む、前記化合物。
- 前記抗miR核酸配列が、抗miR126核酸配列、抗miR142核酸配列、抗miR155核酸配列、抗miR9核酸配列、抗miR10b核酸配列、抗miR21核酸配列、抗miR17核酸配列、抗miR92核酸配列、抗miR125b核酸配列、または抗miR146a核酸配列である、請求項16に記載の化合物。
- 前記抗miR核酸配列が、2’O-メチル、2’-デオキシ-2’-フルオロ、2’-デオキシ、ユニバーサル塩基、5-C-メチル、逆位デオキシ脱塩基残基結合、及びロックド核酸からなる群から選択される化学修飾を含む、請求項17に記載の化合物。
- 薬学的に許容される賦形剤と、請求項1~18のいずれか一項に記載の前記化合物とを含む医薬組成物。
- 第2の治療薬をさらに含む、請求項19に記載の医薬組成物。
- 前記第2の治療薬が、抗腫瘍もしくは抗癌剤、細胞傷害性薬剤、細胞増殖抑制剤、抗炎症剤、鎮痛剤、抗感染症薬、増殖阻害剤、免疫原性薬剤、免疫調節剤、及びケモカインからなる群から選択される、請求項20に記載の医薬組成物。
- 前記抗癌剤が、細胞死促進剤である、請求項21に記載の医薬組成物。
- 前記第2の治療薬が、アクチノマイシンD/ダクチノマイシン、ブレオマイシン、ダウノルビシン、ドキソルビシン、ドキソルビシン(ペグ化リポソーム)、エピルビシン、イダルビシン、マイトマイシン、ミトキサントロン、エトポシド、ドセタキセル、イリノテカン、パクリタキセル、トポテカン、ビンブラスチン、ビンクリスチン、ビノレルビン、カルボプラチン、シスプラチン、オキサリプラチン、アレムツザマブ(Alemtuzamab)、BCG、ベバシズマブ、セツキシマブ、デノスマブ、エルロチニブ、ゲフィチニブ、イマチニブ、インターフェロン、イピリムマブ、ラパチニブ、モノメチルオリスタチンE(MMEA)、メルタンシン(DM1)、リツキシマブ、スニチニブ、ソラフェニブ、テムシロリムス、及びトラスツズマブ、またはこれらの任意の組み合わせ(複数可)からなる群から選択される、請求項21に記載の医薬組成物。
- 疾患の治療を、それを必要とする対象に施す方法であって、前記方法が、請求項1~18のいずれか一項に記載の前記化合物または請求項19~23のいずれか一項に記載の前記医薬組成物の有効量を、前記対象に投与することを含む、前記方法。
- 前記疾患が、がん、感染性疾患、または自己免疫疾患である、請求項24に記載の方法。
- 前記がんが、造血細胞癌である、請求項25に記載の方法。
- 前記がんが、造血細胞癌ではない、請求項25に記載の方法。
- 前記がんが、骨髄腫または急性骨髄性白血病である、請求項25に記載の方法。
- 前記がんが、前立腺癌、乳癌、神経膠芽腫、卵巣癌、肺癌、頭頸部癌、食道癌、皮膚癌、悪性黒色腫、脳癌、大腸癌、リンパ腫、もしくは骨髄腫、膵臓癌、慢性骨髄性白血病(CML)、または骨髄異形成症候群(MDS)である、請求項25に記載の方法。
- 前記化合物または前記組成物が、静脈内、非経口、皮下、筋肉内、経皮、腹腔内、鼻腔内、エアロゾル、経口、または局所投与によって、前記対象に投与される、請求項24~29のいずれか一項に記載の方法。
- 前記治療が、前記化合物もしくは組成物の用量に依存性である、請求項24~30のいずれか一項に記載の方法。
- 前記化合物の約0.001mg/kg~約100mg/kgが、前記対象に投与される、請求項24~30のいずれか一項に記載の方法。
- 前記がんが、化学療法後の再発がんである、請求項25~29のいずれか一項に記載の方法。
- 前記再発がんが、化学療法耐性である、請求項33に記載の方法。
- 前記化合物または前記組成物が、がん幹細胞の細胞周期開始を促進し、これによって前記がんを治療する、請求項24~34のいずれか一項に記載の方法。
- 前記がん幹細胞が、白血病幹細胞(LSC)である、請求項35に記載の方法。
- 前記LSCが、CD34+CD38+コミッテッド前駆細胞または未分化CD34+CD38-前駆細胞である、請求項36に記載の方法。
- 細胞中のマイクロRNAの活性を低下させる方法であって、前記細胞を請求項1~18のいずれか一項に記載の前記化合物の有効量と接触させることを含む、前記方法。
- 前記細胞が、がん細胞である、請求項38に記載の方法。
- 前記細胞が、急性骨髄性リンパ系(AML)細胞、前立腺癌細胞、乳癌細胞、神経膠芽腫細胞、卵巣癌細胞、肺癌細胞、頭頸部癌細胞、食道癌細胞、皮膚癌細胞、悪性黒色腫細胞、脳癌細胞、大腸癌細胞、リンパ腫細胞、骨髄腫細胞、膵臓癌細胞、慢性骨髄性白血病(CML)細胞、または骨髄異形成症候群(MDS)細胞である、請求項39に記載の方法。
- 前記AML細胞が、骨髄からのものである、請求項40に記載の方法。
- 前記細胞が、インビトロで培養された細胞である、請求項38~41のいずれか一項に記載の方法。
- 前記細胞が、宿主中のin situにある、請求項38~41のいずれか一項に記載の方法。
- 前記細胞が、ex vivoで培養された組織内にある、請求項38~41のいずれか一項に記載の方法。
- 前記接触させるステップが、ウイルス形質導入を含まない、請求項38~41のいずれか一項に記載の方法。
- 前記接触させるステップが、ウイルス形質導入を含まず、前記細胞が、前記化合物と接触される、請求項38~41のいずれか一項に記載の方法。
- 前記細胞が、前記化合物の約1~100ナノモル濃度と接触される、請求項38~46のいずれか一項に記載の方法。
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