JP2016507248A5 - - Google Patents
Download PDFInfo
- Publication number
- JP2016507248A5 JP2016507248A5 JP2015558958A JP2015558958A JP2016507248A5 JP 2016507248 A5 JP2016507248 A5 JP 2016507248A5 JP 2015558958 A JP2015558958 A JP 2015558958A JP 2015558958 A JP2015558958 A JP 2015558958A JP 2016507248 A5 JP2016507248 A5 JP 2016507248A5
- Authority
- JP
- Japan
- Prior art keywords
- clonotype
- candidate
- database
- clonotypes
- sequence
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Granted
Links
- 238000000034 method Methods 0.000 claims 19
- 108020004707 nucleic acids Proteins 0.000 claims 6
- 150000007523 nucleic acids Chemical class 0.000 claims 6
- 102000039446 nucleic acids Human genes 0.000 claims 6
- 230000008521 reorganization Effects 0.000 claims 6
- 208000019420 lymphoid neoplasm Diseases 0.000 claims 4
- 230000008707 rearrangement Effects 0.000 claims 4
- 108700005091 Immunoglobulin Genes Proteins 0.000 claims 2
- 102000006496 Immunoglobulin Heavy Chains Human genes 0.000 claims 2
- 108010019476 Immunoglobulin Heavy Chains Proteins 0.000 claims 2
- 108020004511 Recombinant DNA Proteins 0.000 claims 2
- 208000007660 Residual Neoplasm Diseases 0.000 claims 2
- 108700042075 T-Cell Receptor Genes Proteins 0.000 claims 2
- 210000001744 T-lymphocyte Anatomy 0.000 claims 2
- 210000003719 b-lymphocyte Anatomy 0.000 claims 2
- 238000012544 monitoring process Methods 0.000 claims 2
- 238000012163 sequencing technique Methods 0.000 claims 2
- 102100032392 Circadian-associated transcriptional repressor Human genes 0.000 claims 1
- 101710130150 Circadian-associated transcriptional repressor Proteins 0.000 claims 1
- 108091028043 Nucleic acid sequence Proteins 0.000 claims 1
- 238000003745 diagnosis Methods 0.000 claims 1
- 201000010099 disease Diseases 0.000 claims 1
- 208000037265 diseases, disorders, signs and symptoms Diseases 0.000 claims 1
- 230000003902 lesion Effects 0.000 claims 1
- 239000002773 nucleotide Substances 0.000 claims 1
- 125000003729 nucleotide group Chemical group 0.000 claims 1
- 238000006467 substitution reaction Methods 0.000 claims 1
Applications Claiming Priority (5)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201361768269P | 2013-02-22 | 2013-02-22 | |
| US61/768,269 | 2013-02-22 | ||
| US13/834,794 US9528160B2 (en) | 2008-11-07 | 2013-03-15 | Rare clonotypes and uses thereof |
| US13/834,794 | 2013-03-15 | ||
| PCT/US2014/017416 WO2014130685A1 (en) | 2013-02-22 | 2014-02-20 | Rare clonotypes and uses thereof |
Publications (3)
| Publication Number | Publication Date |
|---|---|
| JP2016507248A JP2016507248A (ja) | 2016-03-10 |
| JP2016507248A5 true JP2016507248A5 (enExample) | 2017-03-02 |
| JP6513035B2 JP6513035B2 (ja) | 2019-05-15 |
Family
ID=51391810
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| JP2015558958A Active JP6513035B2 (ja) | 2013-02-22 | 2014-02-20 | 希少クロノタイプおよびその用途 |
Country Status (6)
| Country | Link |
|---|---|
| EP (1) | EP2959020B1 (enExample) |
| JP (1) | JP6513035B2 (enExample) |
| AU (1) | AU2014218910A1 (enExample) |
| CA (1) | CA2900240A1 (enExample) |
| ES (1) | ES2748204T3 (enExample) |
| WO (1) | WO2014130685A1 (enExample) |
Families Citing this family (31)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US9528160B2 (en) | 2008-11-07 | 2016-12-27 | Adaptive Biotechnolgies Corp. | Rare clonotypes and uses thereof |
| US8748103B2 (en) | 2008-11-07 | 2014-06-10 | Sequenta, Inc. | Monitoring health and disease status using clonotype profiles |
| EP2364368B1 (en) | 2008-11-07 | 2014-01-15 | Sequenta, Inc. | Methods of monitoring conditions by sequence analysis |
| US8628927B2 (en) | 2008-11-07 | 2014-01-14 | Sequenta, Inc. | Monitoring health and disease status using clonotype profiles |
| US9365901B2 (en) | 2008-11-07 | 2016-06-14 | Adaptive Biotechnologies Corp. | Monitoring immunoglobulin heavy chain evolution in B-cell acute lymphoblastic leukemia |
| US9506119B2 (en) | 2008-11-07 | 2016-11-29 | Adaptive Biotechnologies Corp. | Method of sequence determination using sequence tags |
| ES2568509T3 (es) | 2009-01-15 | 2016-04-29 | Adaptive Biotechnologies Corporation | Perfilado de la inmunidad adaptativa y métodos para la generación de anticuerpos monoclonales |
| CA2765949C (en) | 2009-06-25 | 2016-03-29 | Fred Hutchinson Cancer Research Center | Method of measuring adaptive immunity |
| US9043160B1 (en) | 2009-11-09 | 2015-05-26 | Sequenta, Inc. | Method of determining clonotypes and clonotype profiles |
| US10385475B2 (en) | 2011-09-12 | 2019-08-20 | Adaptive Biotechnologies Corp. | Random array sequencing of low-complexity libraries |
| HK1201565A1 (en) | 2011-10-21 | 2015-09-04 | Adaptive Biotechnologies Corporation | Quantification of adaptive immune cell genomes in a complex mixture of cells |
| EP3388535B1 (en) | 2011-12-09 | 2021-03-24 | Adaptive Biotechnologies Corporation | Diagnosis of lymphoid malignancies and minimal residual disease detection |
| US9499865B2 (en) | 2011-12-13 | 2016-11-22 | Adaptive Biotechnologies Corp. | Detection and measurement of tissue-infiltrating lymphocytes |
| US10077478B2 (en) | 2012-03-05 | 2018-09-18 | Adaptive Biotechnologies Corp. | Determining paired immune receptor chains from frequency matched subunits |
| PT2831276T (pt) | 2012-05-08 | 2016-07-26 | Adaptive Biotechnologies Corp | Composições e método para medição e calibração do viés de amplificação em reações pcr multiplex |
| EP2904111B1 (en) | 2012-10-01 | 2017-12-06 | Adaptive Biotechnologies Corporation | Immunocompetence assessment by adaptive immune receptor diversity and clonality characterization |
| WO2015160439A2 (en) | 2014-04-17 | 2015-10-22 | Adaptive Biotechnologies Corporation | Quantification of adaptive immune cell genomes in a complex mixture of cells |
| US9708657B2 (en) | 2013-07-01 | 2017-07-18 | Adaptive Biotechnologies Corp. | Method for generating clonotype profiles using sequence tags |
| CA2941612A1 (en) | 2014-03-05 | 2015-09-11 | Adaptive Biotechnologies Corporation | Methods using randomer-containing synthetic molecules |
| US10066265B2 (en) | 2014-04-01 | 2018-09-04 | Adaptive Biotechnologies Corp. | Determining antigen-specific t-cells |
| CA2966201A1 (en) | 2014-10-29 | 2016-05-06 | Adaptive Biotechnologies Corp. | Highly-multiplexed simultaneous detection of nucleic acids encoding paired adaptive immune receptor heterodimers from many samples |
| US10246701B2 (en) | 2014-11-14 | 2019-04-02 | Adaptive Biotechnologies Corp. | Multiplexed digital quantitation of rearranged lymphoid receptors in a complex mixture |
| EP3498866B1 (en) | 2014-11-25 | 2026-02-25 | Adaptive Biotechnologies Corp. | Characterization of adaptive immune response to vaccination or infection using immune repertoire sequencing |
| WO2016138122A1 (en) | 2015-02-24 | 2016-09-01 | Adaptive Biotechnologies Corp. | Methods for diagnosing infectious disease and determining hla status using immune repertoire sequencing |
| EP3277294B1 (en) | 2015-04-01 | 2024-05-15 | Adaptive Biotechnologies Corp. | Method of identifying human compatible t cell receptors specific for an antigenic target |
| CN107849560B (zh) * | 2015-04-27 | 2021-10-22 | 阿布维特罗有限责任公司 | 对治疗剂和疾病特异性抗原进行测序、确定、配对和验证的方法 |
| US10428325B1 (en) | 2016-09-21 | 2019-10-01 | Adaptive Biotechnologies Corporation | Identification of antigen-specific B cell receptors |
| EP3676399B1 (en) | 2017-09-01 | 2022-05-11 | Life Technologies Corporation | Compositions and methods for immune repertoire sequencing |
| US11254980B1 (en) | 2017-11-29 | 2022-02-22 | Adaptive Biotechnologies Corporation | Methods of profiling targeted polynucleotides while mitigating sequencing depth requirements |
| WO2020018836A1 (en) | 2018-07-18 | 2020-01-23 | Life Technologies Corporation | Compositions and methods for immune repertoire sequencing |
| WO2022204443A1 (en) | 2021-03-24 | 2022-09-29 | Genentech, Inc. | Efficient tcr gene editing in t lymphocytes |
Family Cites Families (9)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| WO1990004648A1 (en) | 1988-10-20 | 1990-05-03 | Alexander Alan Morley | Method for diagnosis of monoclonality in leukaemia and lymphoma |
| US5837447A (en) | 1992-04-15 | 1998-11-17 | Blood Center Research Foundation, Inc., The | Monitoring an immune response by analysis of amplified immunoglobulin or T-cell-receptor nucleic acid |
| US6087096A (en) | 1995-11-13 | 2000-07-11 | Dau; Peter C. | Method of intrafamily fragment analysis of the T cell receptor α and β chain CDR3 regions |
| CA2257152C (en) * | 1996-06-03 | 2009-01-27 | Linda M. Pilarski | Methods for detection of rearranged dna |
| WO2004033728A2 (en) | 2002-10-11 | 2004-04-22 | Erasmus Universiteit Rotterdam | Nucleic acid amplification primers for pcr-based clonality studies |
| DE60326052D1 (de) | 2003-12-15 | 2009-03-19 | Pasteur Institut | Ermittlung des Repertoires von B-Lymphozyten Populationen |
| WO2007087312A2 (en) | 2006-01-23 | 2007-08-02 | Population Genetics Technologies Ltd. | Molecular counting |
| US9528160B2 (en) * | 2008-11-07 | 2016-12-27 | Adaptive Biotechnolgies Corp. | Rare clonotypes and uses thereof |
| EP3144673B1 (en) * | 2010-05-06 | 2019-07-10 | Adaptive Biotechnologies Corporation | Monitoring lymphoid neoplasm status using clonotype profiles |
-
2014
- 2014-02-20 ES ES14754622T patent/ES2748204T3/es active Active
- 2014-02-20 CA CA2900240A patent/CA2900240A1/en not_active Abandoned
- 2014-02-20 WO PCT/US2014/017416 patent/WO2014130685A1/en not_active Ceased
- 2014-02-20 JP JP2015558958A patent/JP6513035B2/ja active Active
- 2014-02-20 AU AU2014218910A patent/AU2014218910A1/en not_active Abandoned
- 2014-02-20 EP EP14754622.0A patent/EP2959020B1/en active Active
Similar Documents
| Publication | Publication Date | Title |
|---|---|---|
| Minervina et al. | T‐cell receptor and B‐cell receptor repertoire profiling in adaptive immunity | |
| US20230313291A1 (en) | System and method for massively parallel analysis for nucleic acids in single cells | |
| Robins | Immunosequencing: applications of immune repertoire deep sequencing | |
| Sanchez Sanchez et al. | Identification of distinct functional thymic programming of fetal and pediatric human γδ thymocytes via single-cell analysis | |
| Galson et al. | In-depth assessment of within-individual and inter-individual variation in the B cell receptor repertoire | |
| Corcoran et al. | Production of individualized V gene databases reveals high levels of immunoglobulin genetic diversity | |
| Chaudhary et al. | Analyzing immunoglobulin repertoires | |
| CN102459643B (zh) | 检测获得性免疫的方法 | |
| US10150996B2 (en) | Quantification of adaptive immune cell genomes in a complex mixture of cells | |
| Shaw et al. | Transcriptome sequencing and annotation for the Jamaican fruit bat (Artibeus jamaicensis) | |
| JP2016523547A5 (enExample) | ||
| US20120058902A1 (en) | Method of measuring adaptive immunity | |
| WO2013192570A1 (en) | System and methods for genetic analysis of mixed cell populations | |
| JP2013524848A5 (enExample) | ||
| US20210317522A1 (en) | Phenotypic and molecular characterisation of single cells | |
| US20200131564A1 (en) | High-coverage and ultra-accurate immune repertoire sequencing using molecular identifiers | |
| JP2012508011A5 (enExample) | ||
| WO2017028753A1 (zh) | 多重pcr引物及其应用 | |
| Lin et al. | Deep sequencing of the T cell receptor β repertoire reveals signature patterns and clonal drift in atherosclerotic plaques and patients | |
| Schnekenberg et al. | Next-generation sequencing in childhood disorders | |
| CN105164277A (zh) | 用于评估免疫组库的方法 | |
| Casillas-Espinosa et al. | Evaluating whole genome sequence data from the Genetic Absence Epilepsy Rat from Strasbourg and its related non-epileptic strain | |
| Mehta et al. | Mutational dynamics across VOCs in International travellers and Community transmission underscores importance of Spike-ACE2 interaction | |
| Fu et al. | A comprehensive profiling of T-and B-lymphocyte receptor repertoires from a Chinese-origin rhesus macaque by high-throughput sequencing | |
| Lee et al. | The frontiers of sequencing in undiagnosed neurodevelopmental diseases |