JP2010536383A - 粒子固定化のための支持体表面の改変方法ならびに核酸分析のための固定化粒子の使用 - Google Patents

粒子固定化のための支持体表面の改変方法ならびに核酸分析のための固定化粒子の使用 Download PDF

Info

Publication number
JP2010536383A
JP2010536383A JP2010522077A JP2010522077A JP2010536383A JP 2010536383 A JP2010536383 A JP 2010536383A JP 2010522077 A JP2010522077 A JP 2010522077A JP 2010522077 A JP2010522077 A JP 2010522077A JP 2010536383 A JP2010536383 A JP 2010536383A
Authority
JP
Japan
Prior art keywords
group
support
probe
beads
nucleic acid
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Withdrawn
Application number
JP2010522077A
Other languages
English (en)
Japanese (ja)
Inventor
ダグラス グレイナー,
ジェレミー スチュアート,
メン タイン,
スティーブン エム. メンチェン,
Original Assignee
アプライド バイオシステムズ, エルエルシー
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by アプライド バイオシステムズ, エルエルシー filed Critical アプライド バイオシステムズ, エルエルシー
Publication of JP2010536383A publication Critical patent/JP2010536383A/ja
Withdrawn legal-status Critical Current

Links

Images

Classifications

    • CCHEMISTRY; METALLURGY
    • C40COMBINATORIAL TECHNOLOGY
    • C40BCOMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
    • C40B20/00Methods specially adapted for identifying library members
    • C40B20/04Identifying library members by means of a tag, label, or other readable or detectable entity associated with the library members, e.g. decoding processes
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07CACYCLIC OR CARBOCYCLIC COMPOUNDS
    • C07C335/00Thioureas, i.e. compounds containing any of the groups, the nitrogen atoms not being part of nitro or nitroso groups
    • C07C335/04Derivatives of thiourea
    • C07C335/16Derivatives of thiourea having nitrogen atoms of thiourea groups bound to carbon atoms of six-membered aromatic rings of a carbon skeleton
    • C07C335/20Derivatives of thiourea having nitrogen atoms of thiourea groups bound to carbon atoms of six-membered aromatic rings of a carbon skeleton being further substituted by nitrogen atoms, not being part of nitro or nitroso groups
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07HSUGARS; DERIVATIVES THEREOF; NUCLEOSIDES; NUCLEOTIDES; NUCLEIC ACIDS
    • C07H21/00Compounds containing two or more mononucleotide units having separate phosphate or polyphosphate groups linked by saccharide radicals of nucleoside groups, e.g. nucleic acids
    • CCHEMISTRY; METALLURGY
    • C12BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12QMEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869Methods for sequencing
    • CCHEMISTRY; METALLURGY
    • C40COMBINATORIAL TECHNOLOGY
    • C40BCOMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
    • C40B40/00Libraries per se, e.g. arrays, mixtures
    • C40B40/04Libraries containing only organic compounds
    • CCHEMISTRY; METALLURGY
    • C40COMBINATORIAL TECHNOLOGY
    • C40BCOMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
    • C40B40/00Libraries per se, e.g. arrays, mixtures
    • C40B40/04Libraries containing only organic compounds
    • C40B40/06Libraries containing nucleotides or polynucleotides, or derivatives thereof
    • CCHEMISTRY; METALLURGY
    • C40COMBINATORIAL TECHNOLOGY
    • C40BCOMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
    • C40B40/00Libraries per se, e.g. arrays, mixtures
    • C40B40/04Libraries containing only organic compounds
    • C40B40/06Libraries containing nucleotides or polynucleotides, or derivatives thereof
    • C40B40/08Libraries containing RNA or DNA which encodes proteins, e.g. gene libraries
    • CCHEMISTRY; METALLURGY
    • C40COMBINATORIAL TECHNOLOGY
    • C40BCOMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
    • C40B50/00Methods of creating libraries, e.g. combinatorial synthesis
    • C40B50/14Solid phase synthesis, i.e. wherein one or more library building blocks are bound to a solid support during library creation; Particular methods of cleavage from the solid support
    • C40B50/18Solid phase synthesis, i.e. wherein one or more library building blocks are bound to a solid support during library creation; Particular methods of cleavage from the solid support using a particular method of attachment to the solid support
    • CCHEMISTRY; METALLURGY
    • C40COMBINATORIAL TECHNOLOGY
    • C40BCOMBINATORIAL CHEMISTRY; LIBRARIES, e.g. CHEMICAL LIBRARIES
    • C40B80/00Linkers or spacers specially adapted for combinatorial chemistry or libraries, e.g. traceless linkers or safety-catch linkers
    • CCHEMISTRY; METALLURGY
    • C07ORGANIC CHEMISTRY
    • C07BGENERAL METHODS OF ORGANIC CHEMISTRY; APPARATUS THEREFOR
    • C07B2200/00Indexing scheme relating to specific properties of organic compounds
    • C07B2200/11Compounds covalently bound to a solid support

Landscapes

  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Molecular Biology (AREA)
  • Biochemistry (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • General Chemical & Material Sciences (AREA)
  • Medicinal Chemistry (AREA)
  • Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Biotechnology (AREA)
  • Analytical Chemistry (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Structural Engineering (AREA)
  • Physics & Mathematics (AREA)
  • Biophysics (AREA)
  • Immunology (AREA)
  • Microbiology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
JP2010522077A 2007-08-23 2008-08-22 粒子固定化のための支持体表面の改変方法ならびに核酸分析のための固定化粒子の使用 Withdrawn JP2010536383A (ja)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US93564907P 2007-08-23 2007-08-23
PCT/US2008/074075 WO2009026546A2 (fr) 2007-08-23 2008-08-22 Procédés de modification de surfaces de support pour une immobilisation de particules et utilisation des particules immobilisées pour analyser des acides nucléiques

Publications (1)

Publication Number Publication Date
JP2010536383A true JP2010536383A (ja) 2010-12-02

Family

ID=39790211

Family Applications (1)

Application Number Title Priority Date Filing Date
JP2010522077A Withdrawn JP2010536383A (ja) 2007-08-23 2008-08-22 粒子固定化のための支持体表面の改変方法ならびに核酸分析のための固定化粒子の使用

Country Status (4)

Country Link
US (1) US20090099027A1 (fr)
EP (1) EP2181204A2 (fr)
JP (1) JP2010536383A (fr)
WO (1) WO2009026546A2 (fr)

Families Citing this family (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US8173198B2 (en) 2008-07-23 2012-05-08 Life Technologies Corporation Deposition of metal oxides onto surfaces as an immobilization vehicle for carboxylated or phophated particles or polymers
WO2010014820A2 (fr) * 2008-07-30 2010-02-04 Life Technologies Corporation Particules utilisées pour la ligation d'acides nucléiques sur support et la détection par séquençage
GB0907372D0 (en) 2009-04-29 2009-06-10 Invitrogen Dynal As Particles
US9146248B2 (en) 2013-03-14 2015-09-29 Intelligent Bio-Systems, Inc. Apparatus and methods for purging flow cells in nucleic acid sequencing instruments
US9591268B2 (en) 2013-03-15 2017-03-07 Qiagen Waltham, Inc. Flow cell alignment methods and systems
GB201700983D0 (en) 2017-01-20 2017-03-08 Life Tech As Polymeric particles

Family Cites Families (14)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5539097A (en) * 1983-09-02 1996-07-23 Molecular Biosystems, Inc. Oligonucleotide polymeric support system
US5175269A (en) * 1984-01-30 1992-12-29 Enzo Diagnostics, Inc. Compound and detectable molecules having an oligo- or polynucleotide with modifiable reactive group
US6232465B1 (en) * 1994-09-02 2001-05-15 Andrew C. Hiatt Compositions for enzyme catalyzed template-independent creation of phosphodiester bonds using protected nucleotides
US5650234A (en) * 1994-09-09 1997-07-22 Surface Engineering Technologies, Division Of Innerdyne, Inc. Electrophilic polyethylene oxides for the modification of polysaccharides, polypeptides (proteins) and surfaces
US5750341A (en) * 1995-04-17 1998-05-12 Lynx Therapeutics, Inc. DNA sequencing by parallel oligonucleotide extensions
US5900481A (en) * 1996-11-06 1999-05-04 Sequenom, Inc. Bead linkers for immobilizing nucleic acids to solid supports
US6133436A (en) * 1996-11-06 2000-10-17 Sequenom, Inc. Beads bound to a solid support and to nucleic acids
US6537749B2 (en) * 1998-04-03 2003-03-25 Phylos, Inc. Addressable protein arrays
WO1999064623A1 (fr) * 1998-06-10 1999-12-16 Memorec Medical Molecular Research Cologne Stoffel Gmbh Support pour l'identification et l'etablissement en parallele de profils de transcription d'acides polynucleiques
WO2002029003A2 (fr) * 2000-10-06 2002-04-11 The Trustees Of Columbia University In The City Of New York Methode d'analyse massivement parallele destinee a decoder l'adn et l'arn
US7057026B2 (en) * 2001-12-04 2006-06-06 Solexa Limited Labelled nucleotides
US20060110594A1 (en) * 2004-11-24 2006-05-25 Frutos Anthony G Polymer-coated substrates for binding biomolecules and methods of making and using thereof
EP2272983A1 (fr) * 2005-02-01 2011-01-12 AB Advanced Genetic Analysis Corporation Réactifs, méthodes et bibliothèques pour séquencage fondé sur des billes
WO2008039998A2 (fr) * 2006-09-28 2008-04-03 President And Fellows Of Harvard College Procédés de séquençage d'adn

Also Published As

Publication number Publication date
EP2181204A2 (fr) 2010-05-05
WO2009026546A2 (fr) 2009-02-26
US20090099027A1 (en) 2009-04-16
WO2009026546A3 (fr) 2009-05-14

Similar Documents

Publication Publication Date Title
US11697839B2 (en) Methods for detecting and identifying genomic nucleic acids
US10768173B1 (en) Multivalent binding composition for nucleic acid analysis
US7078167B2 (en) Arrays having background features and methods for using the same
US20020037509A1 (en) Polymer coated surfaces for microarray applications
JP2010536383A (ja) 粒子固定化のための支持体表面の改変方法ならびに核酸分析のための固定化粒子の使用
JP2008512084A (ja) 核酸の配列決定のための方法およびデバイス
AU2020285657B2 (en) Multivalent binding composition for nucleic acid analysis
JP2007501003A (ja) 非切断条件下で核酸を分析するための配列特異的エンドヌクレアーゼの使用に関連した方法および組成物
US20040170984A1 (en) Methods and devices for detecting printhead misalignment of an in situ polymeric array synthesis device
JP3883539B2 (ja) エポキシ基を有する放射状ポリエチレングリコール誘導体を用いたハイドロゲルバイオチップの製造方法
JP2017512071A (ja) ゲノム適用および治療適用のための、核酸分子のクローン複製および増幅のためのシステムおよび方法
EP2697396B1 (fr) Procédé et appareil pour une plateforme d'analyse génomique de grande précision utilisant l'hybridation et la dissociation améliorée
JP2007003439A (ja) バイオセンサの製造方法
EP1673480B1 (fr) Utilisation de la photopolymerisation pour l'amplification et la detection d'evenements de reconnaissance moleculaire
US11485966B2 (en) Method for improving loading and stability of nucleic acid
US20220186310A1 (en) Multivalent binding composition for nucleic acid analysis
US20050239082A1 (en) Alien sequences
WO2024050817A1 (fr) Utilisation d'acide glycyrrhizique ou d'un dérivé de celui-ci dans la détection d'acides nucléiques
US20080187910A1 (en) Nucleic acid assay and method of detecting the presence of a nucleic acid sequence
GB2395557A (en) Nucleic acid probes
US20040185451A1 (en) Methods for detecting the presence of a nucleic acid analyte in a sample
Göransson Readout Strategies for Biomolecular Analyses
JP2003279573A (ja) 反応性固相担体及びdna断片検出用具
JP2004069489A (ja) プローブ担体及びその製造方法

Legal Events

Date Code Title Description
A300 Application deemed to be withdrawn because no request for examination was validly filed

Free format text: JAPANESE INTERMEDIATE CODE: A300

Effective date: 20111101