JP2005518811A - 表現型に関連するゲノム全域での配列変化を決定するための方法 - Google Patents

表現型に関連するゲノム全域での配列変化を決定するための方法 Download PDF

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Publication number
JP2005518811A
JP2005518811A JP2003573179A JP2003573179A JP2005518811A JP 2005518811 A JP2005518811 A JP 2005518811A JP 2003573179 A JP2003573179 A JP 2003573179A JP 2003573179 A JP2003573179 A JP 2003573179A JP 2005518811 A JP2005518811 A JP 2005518811A
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Japan
Prior art keywords
fragment
nucleic acid
restriction
immobilized
colony
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JP2003573179A
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English (en)
Japanese (ja)
Inventor
パスカル マイヤー，
イリア レヴィー，
マニュー オステラス，
ロラン ファリネリ，
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Lynx Therapeutics Inc
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Lynx Therapeutics Inc
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Publication date
Priority claimed from GB0205153A external-priority patent/GB0205153D0/en
Application filed by Lynx Therapeutics Inc filed Critical Lynx Therapeutics Inc
Publication of JP2005518811A publication Critical patent/JP2005518811A/ja
Withdrawn legal-status Critical Current

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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6809—Methods for determination or identification of nucleic acids involving differential detection
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C12Q1/6883—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes for diseases caused by alterations of genetic material
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2521/00—Reaction characterised by the enzymatic activity
    • C12Q2521/30—Phosphoric diester hydrolysing, i.e. nuclease
    • C12Q2521/301—Endonuclease

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  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Health & Medical Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Zoology (AREA)
  • Engineering & Computer Science (AREA)
  • Wood Science & Technology (AREA)
  • Genetics & Genomics (AREA)
  • Microbiology (AREA)
  • Molecular Biology (AREA)
  • Immunology (AREA)
  • Biotechnology (AREA)
  • Biophysics (AREA)
  • Biochemistry (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Pathology (AREA)
  • Investigating Or Analysing Materials By The Use Of Chemical Reactions (AREA)
JP2003573179A 2002-03-05 2003-03-05 表現型に関連するゲノム全域での配列変化を決定するための方法 Withdrawn JP2005518811A (ja)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US36202302P 2002-03-05 2002-03-05
GB0205153A GB0205153D0 (en) 2002-03-05 2002-03-05 Methods for detecting genome-wide sequence variations associated with a phenotype
PCT/GB2003/000941 WO2003074734A2 (en) 2002-03-05 2003-03-05 Methods for detecting genome-wide sequence variations associated with a phenotype

Publications (1)

Publication Number Publication Date
JP2005518811A true JP2005518811A (ja) 2005-06-30

Family

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JP2003573179A Withdrawn JP2005518811A (ja) 2002-03-05 2003-03-05 表現型に関連するゲノム全域での配列変化を決定するための方法

Country Status (6)

Country Link
EP (1) EP1483404A2 (de)
JP (1) JP2005518811A (de)
KR (1) KR20050008651A (de)
AU (1) AU2003208480A1 (de)
CA (1) CA2478722A1 (de)
WO (1) WO2003074734A2 (de)

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EP1682680B2 (de) * 2003-10-31 2018-03-21 AB Advanced Genetic Analysis Corporation Verfahren zur herstellung eines gepaarten tag aus einer nukleinsäuresequenz sowie verfahren zur verwendung davon
EP3175914A1 (de) 2004-01-07 2017-06-07 Illumina Cambridge Limited Verbesserungen in oder im zusammenhang mit molekül-arrays
US20050176019A1 (en) * 2004-02-10 2005-08-11 Beutel Bruce A. Method for identification of the location of mutations in whole genomes
WO2006003721A1 (en) * 2004-07-02 2006-01-12 Kabushiki Kaisha Dnaform Method for preparing sequence tags
WO2007145612A1 (en) * 2005-06-06 2007-12-21 454 Life Sciences Corporation Paired end sequencing
GB0514910D0 (en) 2005-07-20 2005-08-24 Solexa Ltd Method for sequencing a polynucleotide template
GB0514935D0 (en) 2005-07-20 2005-08-24 Solexa Ltd Methods for sequencing a polynucleotide template
EP1969146B1 (de) * 2006-01-04 2010-10-06 Si Lok Verfahren zur zuordnung von nukleinsäuren und zur identifikation fein strukturierter variationen in nukleinsäuren sowie hilfsmittel dafür
CN101415839B (zh) 2006-02-08 2012-06-27 亿明达剑桥有限公司 对多核苷酸模板进行测序的方法
US7754429B2 (en) 2006-10-06 2010-07-13 Illumina Cambridge Limited Method for pair-wise sequencing a plurity of target polynucleotides
US8551704B2 (en) 2007-02-16 2013-10-08 Pacific Biosciences Of California, Inc. Controllable strand scission of mini circle DNA
CN101802220B (zh) 2007-07-26 2013-07-31 加利福尼亚太平洋生物科学股份有限公司 分子冗余测序法
WO2009032167A1 (en) * 2007-08-29 2009-03-12 Illumina Cambridge Method for sequencing a polynucleotide template
EP2235217B1 (de) 2008-01-09 2016-04-20 Life Technologies Corporation Verfahren zur herstellung einer bibliothek aus gepaarten markern zur nukleinsäuresequenzierung
US9540637B2 (en) 2008-01-09 2017-01-10 Life Technologies Corporation Nucleic acid adaptors and uses thereof
US8202691B2 (en) 2008-01-25 2012-06-19 Illumina, Inc. Uniform fragmentation of DNA using binding proteins
US8541207B2 (en) 2008-10-22 2013-09-24 Illumina, Inc. Preservation of information related to genomic DNA methylation
EP2669387B1 (de) 2009-08-25 2016-07-20 Illumina, Inc. Verfahren zur Auswahl und Amplifikation von Polynukleotiden
US9012022B2 (en) 2012-06-08 2015-04-21 Illumina, Inc. Polymer coatings
US10910087B2 (en) * 2017-06-27 2021-02-02 Hyunghoon Cho Secure secret-sharing-based crowdsourcing for large-scale association studies of genomic and phenotypic data
JP7477183B2 (ja) * 2019-04-22 2024-05-01 ポステック・リサーチ・アンド・ビジネス・ディベロップメント・ファウンデーション 新規な等温単一反応用プローブセット及びその用途
ES2965266T3 (es) 2020-03-09 2024-04-11 Illumina Inc Métodos para la secuenciación de polinucleótidos
CA3223595A1 (en) 2021-12-16 2023-06-22 Xiaoyu Ma Hybrid clustering
CN118103528A (zh) 2021-12-17 2024-05-28 因美纳有限公司 正交杂交
AU2023233839A1 (en) 2022-03-15 2024-01-18 Illumina, Inc. Concurrent sequencing of forward and reverse complement strands on concatenated polynucleotides for methylation detection
WO2023175042A1 (en) 2022-03-15 2023-09-21 Illumina, Inc. Parallel sample and index sequencing
WO2024061799A1 (en) 2022-09-19 2024-03-28 Illumina, Inc. Deformable polymers comprising immobilised primers
US20240102067A1 (en) 2022-09-26 2024-03-28 Illumina, Inc. Resynthesis Kits and Methods
US20240124914A1 (en) 2022-09-30 2024-04-18 Illumina, Inc. Thermophilic compositions for nucleic acid amplification
US20240110221A1 (en) 2022-09-30 2024-04-04 Illumina, Inc. Methods of modulating clustering kinetics
US20240124929A1 (en) 2022-09-30 2024-04-18 Illumina, Inc. Mesophilic compositions for nucleic acid amplification
US20240110234A1 (en) 2022-09-30 2024-04-04 Illumina, Inc. Amplification Compositions and Methods

Family Cites Families (6)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
AU631562B2 (en) * 1988-02-22 1992-12-03 Pioneer Hi-Bred International, Inc. Genetic linkages between agronomically important genes and restriction fragment length polymorphisms
ES2299229T3 (es) * 1991-09-24 2008-05-16 Keygene N.V. Creadores, kits y series de fragmentos de restriccion usados en la amplificcion selectiva de fragmentos de restriccion.
US5710000A (en) * 1994-09-16 1998-01-20 Affymetrix, Inc. Capturing sequences adjacent to Type-IIs restriction sites for genomic library mapping
WO2000014282A1 (en) * 1998-09-04 2000-03-16 Lynx Therapeutics, Inc. Method of screening for genetic polymorphism
DE60025850T2 (de) * 1999-12-29 2006-08-03 Keygene N.V. Verfahren zur erzeugung von oligonukleotiden, im besonderen zur detektion amplifizierter restriktionsfragmente, die durch aflp erhalten wurden
ES2632538T3 (es) * 2000-04-10 2017-09-14 Taxon Biosciences, Inc. Métodos para el estudio y análisis genético de poblaciones

Also Published As

Publication number Publication date
CA2478722A1 (en) 2003-09-12
KR20050008651A (ko) 2005-01-21
WO2003074734A3 (en) 2004-02-19
WO2003074734A2 (en) 2003-09-12
AU2003208480A1 (en) 2003-09-16
EP1483404A2 (de) 2004-12-08

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