JP2004523201A - シングルコピーゲノムのハイブリダイゼーションプローブおよびその作製方法 - Google Patents

シングルコピーゲノムのハイブリダイゼーションプローブおよびその作製方法 Download PDF

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JP2004523201A
JP2004523201A JP2001585298A JP2001585298A JP2004523201A JP 2004523201 A JP2004523201 A JP 2004523201A JP 2001585298 A JP2001585298 A JP 2001585298A JP 2001585298 A JP2001585298 A JP 2001585298A JP 2004523201 A JP2004523201 A JP 2004523201A
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probe
sequence
nucleic acid
hybridization
dna
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JP2004523201A5 (https=
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ジョーン エイチ． エム． ノール
ピーター ケイ． ローガン
パトリシア エム． カザッロ
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ザ チルドレンズ マーシー ホスピタル
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Priority claimed from US09/573,080 external-priority patent/US6828097B1/en
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Publication of JP2004523201A5 publication Critical patent/JP2004523201A5/ja
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    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6876—Nucleic acid products used in the analysis of nucleic acids, e.g. primers or probes
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6841—In situ hybridisation
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q2600/00—Oligonucleotides characterized by their use
    • C12Q2600/156—Polymorphic or mutational markers

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  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Organic Chemistry (AREA)
  • Analytical Chemistry (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • Molecular Biology (AREA)
  • Biotechnology (AREA)
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  • Physics & Mathematics (AREA)
  • Biochemistry (AREA)
  • Immunology (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Investigating Or Analysing Materials By The Use Of Chemical Reactions (AREA)
JP2001585298A 2000-05-16 2001-05-15 シングルコピーゲノムのハイブリダイゼーションプローブおよびその作製方法 Pending JP2004523201A (ja)

Applications Claiming Priority (3)

Application Number Priority Date Filing Date Title
US09/573,080 US6828097B1 (en) 2000-05-16 2000-05-16 Single copy genomic hybridization probes and method of generating same
US09/854,867 US7014997B2 (en) 2000-05-16 2001-05-14 Chromosome structural abnormality localization with single copy probes
PCT/US2001/015674 WO2001088089A2 (en) 2000-05-16 2001-05-15 Single copy genomic hybridization probes and method of generating same

Publications (2)

Publication Number Publication Date
JP2004523201A true JP2004523201A (ja) 2004-08-05
JP2004523201A5 JP2004523201A5 (https=) 2011-09-01

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JP2001585298A Pending JP2004523201A (ja) 2000-05-16 2001-05-15 シングルコピーゲノムのハイブリダイゼーションプローブおよびその作製方法

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US (2) US20080085509A1 (https=)
EP (1) EP1285093A4 (https=)
JP (1) JP2004523201A (https=)
AU (2) AU2001264610B2 (https=)
CA (1) CA2409752A1 (https=)
IL (1) IL152727A0 (https=)
NZ (2) NZ522406A (https=)
WO (1) WO2001088089A2 (https=)

Cited By (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP2008534011A (ja) * 2005-03-29 2008-08-28 エグザジェン ダイアグノスティクス インコーポレイテッド ユニーク配列ハイブリダイゼーションプローブ（ｕｓｐ）
JP2010522571A (ja) * 2007-03-28 2010-07-08 ザ チルドレンズ マーシー ホスピタル 少コピー数の核酸セグメントを同定および選択する方法
JP2017533733A (ja) * 2014-11-11 2017-11-16 アボツト・モレキユラー・インコーポレイテツド ハイブリダイゼーションプローブおよび方法

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US6828097B1 (en) 2000-05-16 2004-12-07 The Childrens Mercy Hospital Single copy genomic hybridization probes and method of generating same
US7081339B2 (en) * 2002-04-12 2006-07-25 Primera Biosystems, Inc. Methods for variation detection
KR20050073466A (ko) * 2002-09-30 2005-07-13 칠드런스 머시 호스피탈 서브텔로미어 디엔에이 프로브 및 이의 제조 방법
GB0326197D0 (en) * 2003-11-10 2003-12-17 Randox Lab Ltd Molecular marker
US20080044916A1 (en) * 2004-03-26 2008-02-21 Rogan Peter K Computational selection of probes for localizing chromosome breakpoints
US8407013B2 (en) 2005-06-07 2013-03-26 Peter K. Rogan AB initio generation of single copy genomic probes
US7734424B1 (en) 2005-06-07 2010-06-08 Rogan Peter K Ab initio generation of single copy genomic probes
JP2009518004A (ja) * 2005-11-18 2009-05-07 ザ チルドレンズ マーシー ホスピタル 核酸ハイブリダイゼーションにおけるＣｏｔ−１ＤＮＡの歪みの低減
ES2372427T3 (es) * 2006-09-01 2012-01-19 Ventana Medical Systems, Inc. Método para producir sondas de ácido nucleico.
DK2444807T3 (da) 2006-11-01 2014-08-11 Ventana Med Syst Inc Mono- og dinitropyrazolhaptenkonjugater
US7682789B2 (en) 2007-05-04 2010-03-23 Ventana Medical Systems, Inc. Method for quantifying biomolecules conjugated to a nanoparticle
EP2167963B1 (en) 2007-05-23 2019-04-17 Ventana Medical Systems, Inc. Polymeric carriers for immunohistochemistry and in situ hybridization
WO2009149013A2 (en) 2008-06-05 2009-12-10 Ventana Medical Systems, Inc. Compositions comprising nanomaterials and method for using such compositions for histochemical processes
NZ600375A (en) 2009-11-23 2014-10-31 Bayer Cropscience Nv Herbicide tolerant soybean plants and methods for identifying same
PH12012501096A1 (en) 2009-11-23 2012-10-29 BASF Agricultural Solutions Seed US LLC Elite event ee-gm3 and methods and kits for identifying such event in biological samples
CA2780827A1 (en) * 2009-12-31 2011-07-07 Ventana Medical Systems, Inc. Methods for producing uniquely specific nucleic acid probes
US11371087B2 (en) * 2016-06-10 2022-06-28 Takara Bio Usa, Inc. Methods and compositions employing blocked primers
US20230183780A1 (en) 2016-07-25 2023-06-15 InVivo BioTech Services GmbH Dna probes for in situ hybridization on chromosomes
EP4556575A3 (en) 2016-11-21 2025-10-08 Bruker Spatial Biology, Inc. A method for sequencing nucleic acids
EP3794146B1 (en) 2018-05-14 2025-12-10 Bruker Spatial Biology, Inc. Method for identifying a predetermined nucleotide sequence
EP3940075A1 (en) * 2020-07-17 2022-01-19 Istituto Nazionale Di Genetica Molecolare-INGM Inhibitors of line1 and uses thereof
CN113483931B (zh) * 2021-07-02 2023-01-24 中国国家铁路集团有限公司 弓网接触力区段异常识别方法及装置

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US5756696A (en) * 1986-01-16 1998-05-26 Regents Of The University Of California Compositions for chromosome-specific staining
WO1999006552A2 (en) * 1997-08-01 1999-02-11 Genset 5' ESTs FOR SECRETED PROTEINS EXPRESSED IN BRAIN

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US5721098A (en) * 1986-01-16 1998-02-24 The Regents Of The University Of California Comparative genomic hybridization
US5447841A (en) 1986-01-16 1995-09-05 The Regents Of The Univ. Of California Methods for chromosome-specific staining
US5273881A (en) 1990-05-07 1993-12-28 Daikin Industries, Ltd. Diagnostic applications of double D-loop formation
US6040140A (en) * 1991-12-11 2000-03-21 Thomas Jefferson University Methods for screening and treating leukemias resulting from all-1 region chromosome abnormalities
US6121419A (en) * 1992-06-17 2000-09-19 Arch Development Corp. Compositions and methods for detecting gene rearrangements and translocations
HK1004920A1 (en) * 1993-01-21 1998-12-11 President And Fellows Of Harvard College Methods and diagnostic kits utilizing mammalian stress promoters to determine toxicity of a compound
US6150160A (en) * 1995-11-16 2000-11-21 The John Hopkins University Compositions and methods of use of mammalian retrotransposons
US6828097B1 (en) * 2000-05-16 2004-12-07 The Childrens Mercy Hospital Single copy genomic hybridization probes and method of generating same
US7585964B2 (en) * 2001-05-14 2009-09-08 Cancer Genetics, Inc. Methods of analyzing chromosomal translocations using fluorescence in situ hybridization (FISH)

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US5756696A (en) * 1986-01-16 1998-05-26 Regents Of The University Of California Compositions for chromosome-specific staining
WO1999006552A2 (en) * 1997-08-01 1999-02-11 Genset 5' ESTs FOR SECRETED PROTEINS EXPRESSED IN BRAIN

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JPN6011062827; Ｊ．　Ｉｍｍｕｎｏｌ．　Ｍｅｔｈｏｄｓ，　ｖｏｌ．　１６７，　ｐａｇｅｓ　８３-８９　（１９９４） *
JPN6011062829; Ａｎａｌ．　Ｃｈｅｍ．，　ｖｏｌ．　６７，　ｐａｇｅｓ　２６４４-２６４９　（１９９５） *
JPN6011062831; Ａｐｐｌ．　Ｅｎｖｉｒｏｎ．　Ｍｉｃｒｏｂｉｏｌ．，　ｖｏｌ．　５９，　ｐａｇｅｓ　２７９５-２８００　（１９９３） *
JPN6011062833; Ｊ．　Ａｐｐｌ．　Ｂａｃｔｅｒｉｏｌ．，　ｖｏｌ．　８１，　ｐａｇｅｓ　６２６-６３４　（１９９６） *

Cited By (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP2008534011A (ja) * 2005-03-29 2008-08-28 エグザジェン ダイアグノスティクス インコーポレイテッド ユニーク配列ハイブリダイゼーションプローブ（ｕｓｐ）
JP2010522571A (ja) * 2007-03-28 2010-07-08 ザ チルドレンズ マーシー ホスピタル 少コピー数の核酸セグメントを同定および選択する方法
JP2017533733A (ja) * 2014-11-11 2017-11-16 アボツト・モレキユラー・インコーポレイテツド ハイブリダイゼーションプローブおよび方法

Also Published As

Publication number Publication date
AU2001264610B2 (en) 2007-01-04
IL152727A0 (en) 2003-06-24
NZ539223A (en) 2006-10-27
CA2409752A1 (en) 2001-11-22
WO2001088089A8 (en) 2005-04-07
US20080085509A1 (en) 2008-04-10
EP1285093A4 (en) 2005-10-12
WO2001088089A3 (en) 2002-07-04
NZ522406A (en) 2006-05-26
US20090312533A1 (en) 2009-12-17
WO2001088089A2 (en) 2001-11-22
AU6461001A (en) 2001-11-26
EP1285093A2 (en) 2003-02-26

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