JP2002514811A - 化合物のバーチャルコンビナトリアルライブラリーの産生 - Google Patents

化合物のバーチャルコンビナトリアルライブラリーの産生

Info

Publication number
JP2002514811A
JP2002514811A JP2000548804A JP2000548804A JP2002514811A JP 2002514811 A JP2002514811 A JP 2002514811A JP 2000548804 A JP2000548804 A JP 2000548804A JP 2000548804 A JP2000548804 A JP 2000548804A JP 2002514811 A JP2002514811 A JP 2002514811A
Authority
JP
Japan
Prior art keywords
compounds
fragments
fragment
silico
mixture
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Pending
Application number
JP2000548804A
Other languages
English (en)
Japanese (ja)
Inventor
グリフィー,リチャード
スウェイズ,エリック
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Ionis Pharmaceuticals Inc
Original Assignee
Isis Pharmaceuticals Inc
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from US09/076,405 external-priority patent/US6253168B1/en
Application filed by Isis Pharmaceuticals Inc filed Critical Isis Pharmaceuticals Inc
Publication of JP2002514811A publication Critical patent/JP2002514811A/ja
Pending legal-status Critical Current

Links

Classifications

    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B35/00ICT specially adapted for in silico combinatorial libraries of nucleic acids, proteins or peptides
    • G16B35/10Design of libraries
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16BBIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
    • G16B15/00ICT specially adapted for analysing two-dimensional or three-dimensional molecular structures, e.g. structural or functional relations or structure alignment
    • G16B15/30Drug targeting using structural data; Docking or binding prediction
    • GPHYSICS
    • G16INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
    • G16CCOMPUTATIONAL CHEMISTRY; CHEMOINFORMATICS; COMPUTATIONAL MATERIALS SCIENCE
    • G16C20/00Chemoinformatics, i.e. ICT specially adapted for the handling of physicochemical or structural data of chemical particles, elements, compounds or mixtures
    • G16C20/60In silico combinatorial chemistry
    • G16C20/62Design of libraries

Landscapes

  • Engineering & Computer Science (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Physics & Mathematics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Health & Medical Sciences (AREA)
  • Bioinformatics & Computational Biology (AREA)
  • Library & Information Science (AREA)
  • Theoretical Computer Science (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Medicinal Chemistry (AREA)
  • Crystallography & Structural Chemistry (AREA)
  • Evolutionary Biology (AREA)
  • Biophysics (AREA)
  • Medical Informatics (AREA)
  • Biotechnology (AREA)
  • Computing Systems (AREA)
  • Molecular Biology (AREA)
  • Biochemistry (AREA)
  • Pharmacology & Pharmacy (AREA)
  • Organic Low-Molecular-Weight Compounds And Preparation Thereof (AREA)
JP2000548804A 1998-05-12 1999-05-12 化合物のバーチャルコンビナトリアルライブラリーの産生 Pending JP2002514811A (ja)

Applications Claiming Priority (5)

Application Number Priority Date Filing Date Title
US8509298P 1998-05-12 1998-05-12
US09/076,405 1998-05-12
US09/076,405 US6253168B1 (en) 1998-05-12 1998-05-12 Generation of virtual combinatorial libraries of compounds
US60/085,092 1998-05-12
PCT/US1999/010493 WO1999059061A1 (en) 1998-05-12 1999-05-12 Generation of virtual combinatorial libraries of compounds

Publications (1)

Publication Number Publication Date
JP2002514811A true JP2002514811A (ja) 2002-05-21

Family

ID=26758067

Family Applications (1)

Application Number Title Priority Date Filing Date
JP2000548804A Pending JP2002514811A (ja) 1998-05-12 1999-05-12 化合物のバーチャルコンビナトリアルライブラリーの産生

Country Status (4)

Country Link
EP (1) EP1127312A4 (de)
JP (1) JP2002514811A (de)
AU (1) AU3900999A (de)
WO (1) WO1999059061A1 (de)

Cited By (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP2021501304A (ja) * 2017-09-05 2021-01-14 エスアールアイ インターナショナルSRI International 質量分析によって区別可能な合成化合物、ライブラリ及びその方法
JPWO2020054840A1 (ja) * 2018-09-14 2021-08-30 富士フイルム株式会社 化合物構造の生成方法、化合物構造の生成プログラム、及び化合物構造の生成装置
US12040056B2 (en) 2018-09-14 2024-07-16 Fujifilm Corporation Method for evaluating synthetic aptitude of compound, program for evaluating synthetic aptitude of compound, and device for evaluating synthetic aptitude of compound

Families Citing this family (2)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
AU2001292740A1 (en) * 2000-09-20 2002-04-02 Dimitris K. Agrafiotis Method, system, and computer program product for encoding and building products of a virtual combinatorial library
GB2375536A (en) * 2000-12-01 2002-11-20 Univ Sheffield Combinatorial molecule design system and method

Family Cites Families (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US5573905A (en) * 1992-03-30 1996-11-12 The Scripps Research Institute Encoded combinatorial chemical libraries
US5565324A (en) * 1992-10-01 1996-10-15 The Trustees Of Columbia University In The City Of New York Complex combinatorial chemical libraries encoded with tags
WO1997027559A1 (en) * 1996-01-26 1997-07-31 Patterson David E Method of creating and searching a molecular virtual library using validated molecular structure descriptors
US5880972A (en) * 1996-02-26 1999-03-09 Pharmacopeia, Inc. Method and apparatus for generating and representing combinatorial chemistry libraries
EP0818744A3 (de) * 1996-07-08 1998-07-08 Proteus Molecular Design Limited Verfahren zur Auswahl von Kandidat-Drogenverbindungen

Cited By (5)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
JP2021501304A (ja) * 2017-09-05 2021-01-14 エスアールアイ インターナショナルSRI International 質量分析によって区別可能な合成化合物、ライブラリ及びその方法
JP7090150B2 (ja) 2017-09-05 2022-06-23 エスアールアイ インターナショナル 質量分析によって区別可能な合成化合物、ライブラリ及びその方法
JPWO2020054840A1 (ja) * 2018-09-14 2021-08-30 富士フイルム株式会社 化合物構造の生成方法、化合物構造の生成プログラム、及び化合物構造の生成装置
JP7190498B2 (ja) 2018-09-14 2022-12-15 富士フイルム株式会社 化合物構造の生成方法、化合物構造の生成プログラム、及び化合物構造の生成装置
US12040056B2 (en) 2018-09-14 2024-07-16 Fujifilm Corporation Method for evaluating synthetic aptitude of compound, program for evaluating synthetic aptitude of compound, and device for evaluating synthetic aptitude of compound

Also Published As

Publication number Publication date
EP1127312A1 (de) 2001-08-29
EP1127312A4 (de) 2004-09-08
WO1999059061A1 (en) 1999-11-18
AU3900999A (en) 1999-11-29

Similar Documents

Publication Publication Date Title
Reymond et al. Chemical space as a source for new drugs
US5434796A (en) Method and apparatus for designing molecules with desired properties by evolving successive populations
CA2245935C (en) Method of creating and searching a molecular virtual library using validated molecular structure descriptors
JP2003529843A (ja) 化学資源データベース
US6253168B1 (en) Generation of virtual combinatorial libraries of compounds
AU1956797A (en) Technique for representing combinatorial chemistry libraries resulting from selective combination of synthons
Sheridan et al. Designing targeted libraries with genetic algorithms
US7860657B2 (en) Forward synthetic synthon generation and its useto identify molecules similar in 3 dimensional shape to pharmaceutical lead compounds
Cramer et al. AllChem: generating and searching 10 20 synthetically accessible structures
JP2002514811A (ja) 化合物のバーチャルコンビナトリアルライブラリーの産生
US6678619B2 (en) Method, system, and computer program product for encoding and building products of a virtual combinatorial library
JP3928000B2 (ja) 生理活性化合物の設計方法
CN115331751A (zh) 基于机器学习的化学通路分析预测方法及终端设备
Ugi et al. Multicomponent reactions and their libraries-A new approach to preparative organic chemistry
EP1010681A1 (de) Verfahren zur herstellung einer physiologisch wirksamen verbindung
Kozlowski et al. Computer-aided design of chiral ligands: Part I. Database search methods to identify chiral ligand types for asymmetric reactions
WO1999001409A1 (fr) Procede de deduction des fonctions proteiques au moyen d'une base de donnees de ligands
Nakada et al. Optimal protein structure alignment using modified extremal optimization
US6549900B2 (en) Method for creating physiologically active compounds
Blackwood et al. Chemical abstracts service chemical registry system. 13. Enhanced handling of stereochemistry
CN117174164B (zh) 基于预测蛋白质-小分子结合姿势筛选先导化合物的方法
Beroza et al. Applications of random sampling to virtual screening of combinatorial libraries
Chines Computational methodologies for DNA-encoded libraries
JP2002514612A (ja) 化合物のヴァーチャルライブラリーに対応する、化合物のコンビナトリアルライブラリーの製造
US20040137432A1 (en) Design method of physiologically active compounds

Legal Events

Date Code Title Description
A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20040119

A601 Written request for extension of time

Free format text: JAPANESE INTERMEDIATE CODE: A601

Effective date: 20040119

A602 Written permission of extension of time

Free format text: JAPANESE INTERMEDIATE CODE: A602

Effective date: 20040126

A131 Notification of reasons for refusal

Free format text: JAPANESE INTERMEDIATE CODE: A131

Effective date: 20040220

A601 Written request for extension of time

Free format text: JAPANESE INTERMEDIATE CODE: A601

Effective date: 20040519

A602 Written permission of extension of time

Free format text: JAPANESE INTERMEDIATE CODE: A602

Effective date: 20040526

A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20040817

A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A821

Effective date: 20040817

A02 Decision of refusal

Free format text: JAPANESE INTERMEDIATE CODE: A02

Effective date: 20040924

A521 Request for written amendment filed

Free format text: JAPANESE INTERMEDIATE CODE: A523

Effective date: 20041222

A911 Transfer to examiner for re-examination before appeal (zenchi)

Free format text: JAPANESE INTERMEDIATE CODE: A911

Effective date: 20050203

A912 Re-examination (zenchi) completed and case transferred to appeal board

Free format text: JAPANESE INTERMEDIATE CODE: A912

Effective date: 20050408