HK1176095A1 - Efficient base determination in sequencing reactions - Google Patents

Efficient base determination in sequencing reactions

Info

Publication number
HK1176095A1
HK1176095A1 HK13103449.6A HK13103449A HK1176095A1 HK 1176095 A1 HK1176095 A1 HK 1176095A1 HK 13103449 A HK13103449 A HK 13103449A HK 1176095 A1 HK1176095 A1 HK 1176095A1
Authority
HK
Hong Kong
Prior art keywords
sequencing reactions
base determination
efficient base
efficient
determination
Prior art date
Application number
HK13103449.6A
Other languages
English (en)
Chinese (zh)
Inventor
拉多杰．德瑪納克
馬修．卡洛
安德魯．斯帕克斯
弗雷德里克．達爾
克里福德.雷德
Original Assignee
考利達基因組股份有限公司
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Priority claimed from US12/265,593 external-priority patent/US7901890B2/en
Priority claimed from US12/266,385 external-priority patent/US7897344B2/en
Application filed by 考利達基因組股份有限公司 filed Critical 考利達基因組股份有限公司
Publication of HK1176095A1 publication Critical patent/HK1176095A1/xx

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • C12Q1/6874—Methods for sequencing involving nucleic acid arrays, e.g. sequencing by hybridisation
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6827—Hybridisation assays for detection of mutation or polymorphism
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6834—Enzymatic or biochemical coupling of nucleic acids to a solid phase

Landscapes

  • Chemical & Material Sciences (AREA)
  • Life Sciences & Earth Sciences (AREA)
  • Organic Chemistry (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Zoology (AREA)
  • Wood Science & Technology (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Biochemistry (AREA)
  • Biotechnology (AREA)
  • Molecular Biology (AREA)
  • Biophysics (AREA)
  • Analytical Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Immunology (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • General Health & Medical Sciences (AREA)
  • Genetics & Genomics (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Apparatus Associated With Microorganisms And Enzymes (AREA)
HK13103449.6A 2007-12-05 2013-03-18 Efficient base determination in sequencing reactions HK1176095A1 (en)

Applications Claiming Priority (8)

Application Number Priority Date Filing Date Title
US99248507P 2007-12-05 2007-12-05
US2633708P 2008-02-05 2008-02-05
US3591408P 2008-03-12 2008-03-12
US6113408P 2008-06-13 2008-06-13
US10258608P 2008-10-03 2008-10-03
US12/265,593 US7901890B2 (en) 2007-11-05 2008-11-05 Methods and oligonucleotide designs for insertion of multiple adaptors employing selective methylation
US12/266,385 US7897344B2 (en) 2007-11-06 2008-11-06 Methods and oligonucleotide designs for insertion of multiple adaptors into library constructs
US11619308P 2008-11-19 2008-11-19

Publications (1)

Publication Number Publication Date
HK1176095A1 true HK1176095A1 (en) 2013-07-19

Family

ID=42270394

Family Applications (2)

Application Number Title Priority Date Filing Date
HK13103449.6A HK1176095A1 (en) 2007-12-05 2013-03-18 Efficient base determination in sequencing reactions
HK14100024.4A HK1187078A1 (en) 2007-12-05 2014-01-02 Efficient base determination in sequencing reactions

Family Applications After (1)

Application Number Title Priority Date Filing Date
HK14100024.4A HK1187078A1 (en) 2007-12-05 2014-01-02 Efficient base determination in sequencing reactions

Country Status (8)

Country Link
EP (1) EP2227563B1 (xx)
JP (1) JP5362738B2 (xx)
CN (1) CN101932729B (xx)
AU (1) AU2008335362B2 (xx)
CA (1) CA2707901C (xx)
HK (2) HK1176095A1 (xx)
SG (1) SG193776A1 (xx)
WO (1) WO2009076238A2 (xx)

Families Citing this family (26)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
EP2425240A4 (en) 2009-04-30 2012-12-12 Good Start Genetics Inc METHOD AND COMPOSITION FOR EVALUATING GENETIC MARKERS
US9234239B2 (en) 2009-10-23 2016-01-12 Life Technologies Corporation Systems and methods for error correction in DNA sequencing
US9163281B2 (en) * 2010-12-23 2015-10-20 Good Start Genetics, Inc. Methods for maintaining the integrity and identification of a nucleic acid template in a multiplex sequencing reaction
CA2848304A1 (en) 2011-09-09 2013-03-14 The Board Of Trustees Of The Leland Stanford Junior University Methods for sequencing a polynucleotide
WO2013065499A1 (ja) 2011-10-31 2013-05-10 株式会社 日立ハイテクノロジーズ 核酸増幅法、核酸基板、核酸分析方法及び核酸分析装置
US8209130B1 (en) 2012-04-04 2012-06-26 Good Start Genetics, Inc. Sequence assembly
JP2015035212A (ja) * 2013-07-29 2015-02-19 アジレント・テクノロジーズ・インクＡｇｉｌｅｎｔ Ｔｅｃｈｎｏｌｏｇｉｅｓ， Ｉｎｃ． ターゲットシークエンシングパネルから変異を見つける方法
US20190194718A1 (en) * 2014-01-14 2019-06-27 Qiagen Gmbh Generation of tagged dna fragments
WO2016040446A1 (en) 2014-09-10 2016-03-17 Good Start Genetics, Inc. Methods for selectively suppressing non-target sequences
WO2016037361A1 (zh) * 2014-09-12 2016-03-17 深圳华大基因科技有限公司 试剂盒及其在核酸测序中的用途
ES2726149T3 (es) * 2014-09-12 2019-10-02 Mgi Tech Co Ltd Oligonucleótido aislado y su uso en la secuenciación de ácidos nucleicos
EP3208336B1 (en) * 2014-10-14 2019-11-13 MGI Tech Co., Ltd. Linker element and method of using same to construct sequencing library
CN107075512B (zh) * 2014-10-14 2021-01-15 深圳华大智造科技股份有限公司 一种接头元件和使用其构建测序文库的方法
WO2016090583A1 (zh) * 2014-12-10 2016-06-16 深圳华大基因研究院 测序数据处理装置和方法
WO2016090584A1 (zh) * 2014-12-10 2016-06-16 深圳华大基因研究院 确定肿瘤核酸浓度的方法和装置
WO2016090585A1 (zh) * 2014-12-10 2016-06-16 深圳华大基因研究院 测序数据处理装置和方法
US10066259B2 (en) 2015-01-06 2018-09-04 Good Start Genetics, Inc. Screening for structural variants
CN107002153B (zh) * 2015-02-04 2020-10-27 深圳华大生命科学研究院 一种构建长片段测序文库的方法
CN107250383B (zh) * 2015-02-17 2022-09-06 深圳华大智造科技股份有限公司 使用受控的链置换的dna序列测定
AU2016353133B2 (en) 2015-11-11 2022-12-08 Resolution Bioscience, Inc. High efficiency construction of dna libraries
SG11201805600VA (en) 2016-01-15 2018-07-30 Ventana Med Syst Inc Deep sequencing profiling of tumors
JP7457457B2 (ja) * 2016-05-16 2024-03-28 ナノストリング テクノロジーズ，インコーポレイティド サンプル中の標的核酸を検出する方法
BR112019003704A2 (pt) 2016-08-25 2019-05-28 Resolution Bioscience Inc métodos para a detecção de alterações na cópia genômica em amostras de dna
US10415080B2 (en) 2016-11-21 2019-09-17 Nanostring Technologies, Inc. Chemical compositions and methods of using same
AU2019271028A1 (en) 2018-05-14 2020-12-03 Nanostring Technologies, Inc. Chemical compositions and methods of using same
CN114649055B (zh) * 2022-04-15 2022-10-21 北京贝瑞和康生物技术有限公司 用于检测单核苷酸变异和插入缺失的方法、设备和介质

Family Cites Families (4)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
DK1907571T3 (en) * 2005-06-15 2017-08-21 Complete Genomics Inc NUCLEIC ACID ANALYSIS USING INCIDENTAL MIXTURES OF NON-OVERLAPPING FRAGMENTS
EP1951900B1 (en) * 2005-10-07 2016-06-15 Callida Genomics, Inc. Self-assembled single molecule arrays and uses thereof
CA2643700A1 (en) * 2006-02-24 2007-11-22 Callida Genomics, Inc. High throughput genome sequencing on dna arrays
US20090062129A1 (en) * 2006-04-19 2009-03-05 Agencourt Personal Genomics, Inc. Reagents, methods, and libraries for gel-free bead-based sequencing

Also Published As

Publication number Publication date
EP2227563B1 (en) 2012-06-06
SG193776A1 (en) 2013-10-30
JP2011520420A (ja) 2011-07-21
WO2009076238A3 (en) 2009-07-30
CA2707901C (en) 2015-09-15
JP5362738B2 (ja) 2013-12-11
CA2707901A1 (en) 2009-06-18
CN101932729A (zh) 2010-12-29
AU2008335362B2 (en) 2013-07-25
EP2227563A2 (en) 2010-09-15
HK1187078A1 (en) 2014-03-28
AU2008335362A1 (en) 2009-06-18
CN101932729B (zh) 2013-03-27
WO2009076238A2 (en) 2009-06-18

Similar Documents

Publication Publication Date Title
HK1187078A1 (en) Efficient base determination in sequencing reactions
EP2210268A4 (en) IN THE BIOSENSORS USED NEW CHEMISTRY
TWI372013B (en) Portable termainal
EP2201021A4 (en) METHOD OF ALTERNATING NUCLEIC ACID SEQUENCING
EP2217371A4 (en) CATALYSTS AND RELATED METHODS
EP1723162A4 (en) ANTI-microRNA oligonucleotide molecules
PL2112952T3 (pl) Mieszanie rezonansowo-wibracyjne
GB0600417D0 (en) Virtualisation support
GB2446299B (en) Secure barcode
GB0514075D0 (en) Improvements in catalysts
EP2197574A4 (en) MIXER WITH CATALYTIC SURFACE
EP2142339A4 (en) PORTABLE SCREWPIECES
GB2443425B (en) Improvements in fasteners
GB2443424B (en) Improvements in fasteners
EP2475987A4 (en) IDENTIFICATION OF TRANSITION POINTS ON CHEMICAL REACTIONS
GB201013356D0 (en) Improvements in chemical reactions
EP1981985A4 (en) MICRO ARRAY PROCESS
GB0623270D0 (en) Improvements in flooring
GB0426188D0 (en) DNA repeats
GB2436586B (en) Base
GB0406865D0 (en) Nucleic acid sequencing
GB0724909D0 (en) Improvements in catalysts
GB2437270B (en) Portable work base
GB0623231D0 (en) Portable document holder
GB0406864D0 (en) Nucleic acid sequencing