EP1805495A2 - Receiving unit for biological objects and method and device for treating biological objects placed in the receiving unit - Google Patents
Receiving unit for biological objects and method and device for treating biological objects placed in the receiving unitInfo
- Publication number
- EP1805495A2 EP1805495A2 EP05774733A EP05774733A EP1805495A2 EP 1805495 A2 EP1805495 A2 EP 1805495A2 EP 05774733 A EP05774733 A EP 05774733A EP 05774733 A EP05774733 A EP 05774733A EP 1805495 A2 EP1805495 A2 EP 1805495A2
- Authority
- EP
- European Patent Office
- Prior art keywords
- openings
- receiving unit
- plate
- unit according
- recording unit
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Withdrawn
Links
Classifications
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L3/00—Containers or dishes for laboratory use, e.g. laboratory glassware; Droppers
- B01L3/50—Containers for the purpose of retaining a material to be analysed, e.g. test tubes
- B01L3/508—Containers for the purpose of retaining a material to be analysed, e.g. test tubes rigid containers not provided for above
- B01L3/5085—Containers for the purpose of retaining a material to be analysed, e.g. test tubes rigid containers not provided for above for multiple samples, e.g. microtitration plates
- B01L3/50857—Containers for the purpose of retaining a material to be analysed, e.g. test tubes rigid containers not provided for above for multiple samples, e.g. microtitration plates using arrays or bundles of open capillaries for holding samples
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- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L3/00—Containers or dishes for laboratory use, e.g. laboratory glassware; Droppers
- B01L3/50—Containers for the purpose of retaining a material to be analysed, e.g. test tubes
- B01L3/502—Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures
- B01L3/5025—Containers for the purpose of retaining a material to be analysed, e.g. test tubes with fluid transport, e.g. in multi-compartment structures for parallel transport of multiple samples
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L7/00—Heating or cooling apparatus; Heat insulating devices
- B01L7/52—Heating or cooling apparatus; Heat insulating devices with provision for submitting samples to a predetermined sequence of different temperatures, e.g. for treating nucleic acid samples
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- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N1/00—Sampling; Preparing specimens for investigation
- G01N1/28—Preparing specimens for investigation including physical details of (bio-)chemical methods covered elsewhere, e.g. G01N33/50, C12Q
- G01N1/2813—Producing thin layers of samples on a substrate, e.g. smearing, spinning-on
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L2200/00—Solutions for specific problems relating to chemical or physical laboratory apparatus
- B01L2200/06—Fluid handling related problems
- B01L2200/0642—Filling fluids into wells by specific techniques
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L2300/00—Additional constructional details
- B01L2300/04—Closures and closing means
- B01L2300/041—Connecting closures to device or container
- B01L2300/044—Connecting closures to device or container pierceable, e.g. films, membranes
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L2300/00—Additional constructional details
- B01L2300/06—Auxiliary integrated devices, integrated components
- B01L2300/069—Absorbents; Gels to retain a fluid
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- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L2300/00—Additional constructional details
- B01L2300/08—Geometry, shape and general structure
- B01L2300/0809—Geometry, shape and general structure rectangular shaped
- B01L2300/0829—Multi-well plates; Microtitration plates
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L2300/00—Additional constructional details
- B01L2300/18—Means for temperature control
- B01L2300/1805—Conductive heating, heat from thermostatted solids is conducted to receptacles, e.g. heating plates, blocks
- B01L2300/1822—Conductive heating, heat from thermostatted solids is conducted to receptacles, e.g. heating plates, blocks using Peltier elements
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L2300/00—Additional constructional details
- B01L2300/18—Means for temperature control
- B01L2300/1805—Conductive heating, heat from thermostatted solids is conducted to receptacles, e.g. heating plates, blocks
- B01L2300/1827—Conductive heating, heat from thermostatted solids is conducted to receptacles, e.g. heating plates, blocks using resistive heater
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L2400/00—Moving or stopping fluids
- B01L2400/04—Moving fluids with specific forces or mechanical means
- B01L2400/0403—Moving fluids with specific forces or mechanical means specific forces
- B01L2400/0406—Moving fluids with specific forces or mechanical means specific forces capillary forces
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- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L2400/00—Moving or stopping fluids
- B01L2400/04—Moving fluids with specific forces or mechanical means
- B01L2400/0403—Moving fluids with specific forces or mechanical means specific forces
- B01L2400/0454—Moving fluids with specific forces or mechanical means specific forces radiation pressure, optical tweezers
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L2400/00—Moving or stopping fluids
- B01L2400/04—Moving fluids with specific forces or mechanical means
- B01L2400/0475—Moving fluids with specific forces or mechanical means specific mechanical means and fluid pressure
-
- B—PERFORMING OPERATIONS; TRANSPORTING
- B01—PHYSICAL OR CHEMICAL PROCESSES OR APPARATUS IN GENERAL
- B01L—CHEMICAL OR PHYSICAL LABORATORY APPARATUS FOR GENERAL USE
- B01L2400/00—Moving or stopping fluids
- B01L2400/04—Moving fluids with specific forces or mechanical means
- B01L2400/0475—Moving fluids with specific forces or mechanical means specific mechanical means and fluid pressure
- B01L2400/0487—Moving fluids with specific forces or mechanical means specific mechanical means and fluid pressure fluid pressure, pneumatics
-
- G—PHYSICS
- G01—MEASURING; TESTING
- G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
- G01N1/00—Sampling; Preparing specimens for investigation
- G01N1/28—Preparing specimens for investigation including physical details of (bio-)chemical methods covered elsewhere, e.g. G01N33/50, C12Q
- G01N1/286—Preparing specimens for investigation including physical details of (bio-)chemical methods covered elsewhere, e.g. G01N33/50, C12Q involving mechanical work, e.g. chopping, disintegrating, compacting, homogenising
- G01N2001/2873—Cutting or cleaving
- G01N2001/2886—Laser cutting, e.g. tissue catapult
Definitions
- the present invention relates to a recording unit for biological objects, which can serve in particular for receiving biological objects obtained by means of laser microdissection with subsequent laser catapulting. Furthermore, the present invention relates to a device for processing recorded in the receiving unit biological objects, in particular for performing a cyclic heat treatment, for example, for a polymerase chain reaction ("Polymerase Chain Reaction", PCR) and a method for transferring the biological objects from the recording unit in an associated multi-container element such as a microtiter plate.
- a cyclic heat treatment for example, for a polymerase chain reaction ("Polymerase Chain Reaction", PCR) and a method for transferring the biological objects from the recording unit in an associated multi-container element such as a microtiter plate.
- LPC Laser Pressure Catapulting
- a device is proposed in WO 01/73397 A1 of the Applicant, in which biological objects are automatically catapulted into a plurality of containers, for example a so-called microtiter plate.
- Such a device is shown in simplified form in FIG.
- a biological mass 35 for example a cell culture, is arranged on a light-transmitting slide 34.
- a microtiter plate 30 (shown as a detail in cross-section) is mounted such that its openings point to the slide 34.
- the microtiter plate 30 can be moved parallel to the slide 34.
- the device comprises a laser 32, for example a nitrogen laser, whose laser beam 33 can be directed and focused onto the biological mass 35 via a microscope optical system (not shown).
- the microscope optics serves at the same time for optical control and for selecting selected sections of the biological mass 35.
- the selected sections are cut out with the laser beam 33 and then catapulted out of the biological mass 35 by a targeted laser pulse.
- This catapult can be targeted in such a way that the biological object 36 thus released lands in a selected depression of the microtiter plate 30. Since the distance over which targeted catapulting of the biological objects 36 is possible (optimally up to 5 mm) is limited, it is necessary to fill the microtiter plate to a corresponding height with a recording medium 31 on which the biological objects 36 stick to it. The occupied by the recording medium 31 volume is not readily available for subsequent processes or the recording medium must first be resolved for this purpose.
- the biological objects 36 can be collected in individual collection containers such as, for example, reaction vessels and from there, for example by means of manual pipetting, be transferred into corresponding microtiter plates for further sample processing or analysis.
- individual collection containers such as, for example, reaction vessels and from there, for example by means of manual pipetting, be transferred into corresponding microtiter plates for further sample processing or analysis.
- manual pipetting is time consuming and involves the risk of contamination of the sample.
- PCR polymerase chain reaction
- a biological object receiving unit which comprises a plate-shaped element having a plurality of openings for receiving the biological objects passing from a first side of the plate-shaped element to a second side of the plate-shaped element.
- the receiving unit is adapted to cooperate with an associated multi-tank element which comprises a plurality of containers, wherein the openings of the receiving unit are arranged corresponding openings of the container of the container element.
- multi-container elements may be, for example, commercially available microtiter or multiwell plates.
- the openings contain a biological object receiving medium, for example a hydrogel or a liquid.
- the recording medium can contain means for further processing or analysis of a recorded biological object, for example means for carrying out a PCR method.
- a film is stretched on one side of the plate, which is preferably designed such that biological objects remain adhered to the side of the film facing the openings.
- the film can be pretreated chemically or physically.
- a material is preferably used whose strength can be reduced by a treatment, for example by irradiation with ultraviolet radiation.
- film can also be chosen so thin that it can be torn off without such a treatment, for example by means of a punch.
- a biological object accommodating unit comprising a plate-shaped member having a plurality of apertures opened toward a first side of the plate-shaped member, which are closed on a second side of the plate-shaped member with a bottom.
- These openings are designed according to the above-described first aspect of the invention for cooperation with an associated multi-container element, wherein the openings of the receiving unit are arranged corresponding to the openings of the container of the container element.
- the bottom of the receiving unit according to the fourth aspect of the present invention is preferably thinner than 0.5 mm and is optically transparent, i. for light radiation used for analysis purposes, in particular laser radiation, permeable.
- the openings of the receiving unit according to the fourth aspect may include a biological object receiving medium according to the second aspect of the present invention.
- the plate-shaped element is preferably between 1 and 3 mm thick and made of a plastic such as polycarbonate.
- the side walls of the plate-shaped element are preferably inclined to the vertical, for example by an angle of about 9 °, which facilitates the handling of the plate-shaped element.
- Such a receiving unit with a plate-shaped element has the advantage that biological objects can be conveyed in the openings in a simple manner, for example by means of laser pressure catapulting.
- the receiving unit can then be placed on a corresponding multi-container element, and the biological objects can - for example, by centrifuging or by treatment with a punch, which is adapted to the openings of the plate-shaped element - are transported into containers of the multi-container element for further processing there.
- a preferred application here is the implementation of the polymerase chain reaction.
- the required substances are either added to the openings, or they are already present in an existing according to the second aspect of the invention recording medium.
- the plate-shaped element is then covered on the other side with a film to prevent evaporation.
- This film may in particular be a heating foil for carrying out thermal cycles or a heat-permeable foil.
- the receiving unit is then placed in a device according to the invention with a flat heating element in order to carry out necessary heat cycles for carrying out the polymerase chain reaction.
- the field of use of the device is not limited to receiving units according to the invention, but the device can in principle be used together with any flat receiving units.
- FIG. 1 is a plan view of a first embodiment of an inventive recording unit
- FIG. 2 is a cross-sectional view taken along line A-A of FIG. 1;
- FIG. 3A is a cross-sectional view of a second embodiment of a receiving unit according to the invention corresponding to the cross-sectional view of Fig. 2,
- FIG. 3B is a cross-sectional view of a third embodiment of a receiving unit according to the invention corresponding to the cross-sectional view of Fig. 2,
- 5A and 5B process steps for processing biological objects located in the recording unit according to the invention
- 6 shows schematically a device for covering a receiving device according to the invention with a film
- FIG. 7 shows an exemplary embodiment of a device according to the invention for cyclically heating the receiving unit according to the invention and biological objects located therein, and
- FIG. 8 shows a device for obtaining biological objects according to the prior art.
- Fig. 1 is a plan view of a first embodiment of a receiving unit according to the invention for biological objects is shown.
- the receiving unit consists essentially of a plate 1, which may be made of a plastic such as polycarbonate and preferably has a thickness between 1 and 3 mm. In principle, however, other materials and thicknesses of the plate 1 are conceivable.
- the plate 1 has a plurality of openings 2, which in the present embodiment are arranged in a rectangular matrix and pass from an upper side of the plate to an underside of the plate.
- the openings 2 are selected in size, number and shape such that they fit to container openings of a multi-container element such as a microtiter plate or a multiwell plate.
- the plate 1 In the case of a commercially available 96-well microtiter plate with round container openings arranged in eight rows of 12 containers, the plate 1 would also comprise 96 openings 2 in eight rows of 12 openings, with size, shape and position of the openings of size, position and shape of the openings would correspond to the container of the microtiter plate.
- the plate may additionally have a positioning aid or marking, for example in the form of a chamfer 22. By means of such a positioning marking, the recording unit according to the invention can be aligned with a multi-tank unit assigned to it. In addition, such a positioning mark is helpful to avoid confusion between openings, which are located in corresponding positions.
- the openings 2 each contain a recording medium 3.
- the recording medium 3 can in particular fill the entire area of the openings 2, which can be seen in FIG. But it is also conceivable that the openings 2 only partially through the recording medium 3 are filled, or that the recording medium 3 completely fills the openings 2.
- a hydrogel is suitable, wherein hydrogel in this context any substandard is to be understood, which can form colloidal dispersions with water and solidify, for example by gelling.
- An example of this is agarose.
- a liquid is conceivable as a recording medium, which adheres to the edges of the openings 2 by adhesion forces.
- any chemically inert substance having adhesiveness can be used.
- the recording medium 3 serves to record biological objects, which are subsequently processed further, it is preferable that the recording medium 3 is inert with respect to the planned further processing of the biological object, that is, not influenced by subsequent analysis reactions and the like.
- the recording medium may also contain substances which serve the subsequent processing.
- buffers or pre-batches can be incorporated in a hydrogel as the recording medium.
- the recording medium 3 is filled depending on the durability already in the production of the plates 1 or shortly before the use of the receiving unit in the openings 2.
- FIG. 3A shows a cross-sectional view of a second exemplary embodiment of a receiving unit according to the invention, the view corresponding to that of FIG. 2.
- the second embodiment of FIG. 3A is constructed substantially like the receiving unit according to the first embodiment, that is, it comprises a plate 1 with openings 2 according to the first embodiment. In contrast to this, the openings of the disk 1 according to the second embodiment do not contain a recording medium.
- Fig. 3A is further on one side (in Fig. 3A of the underside) of the plate 1, an optionally pretreated film 4 stretched over the openings 2 in order to close them.
- the film 4 is preferably adhesive on the side 2 facing the openings, so that biological objects conveyed into the openings 2 adhere to the film 4.
- film is to be interpreted broadly in this context, it may be a single or double membrane or even a material with a thickness in the millimeter range.
- first and the second embodiment are also combinable, that is, both the film 4 and the recording medium 3 may be provided. In this case, the film 4 need not have any special adhesive properties.
- the film 4 may for example be laminated to the plate 1.
- FIG. 3B is a cross-sectional view of a third embodiment of a receiving unit according to the invention is shown.
- the view again corresponds to that of Figures 2 and 3A.
- the third exemplary embodiment illustrated in FIG. 3B differs from the second exemplary embodiment illustrated in FIG. 3A in that, instead of the film 4 from FIG. 3A, a bottom 37 is now provided, which is preferably integrally or integrally formed with the plate 1.
- the bottom has a thickness of preferably ⁇ 0.5 mm and is optically transparent.
- fluorescence measurements as described later with reference to FIG. 7 are possible.
- the recording unit according to the invention is made of a plastic material which itself has no fluorescence.
- a recording medium may be disposed in the openings 2 as in the first embodiments, or the floor 37 may be provided with an adhesive layer on the side of the openings 2 so that biological objects adhere to the floor 37.
- the receiving units according to the invention of FIGS. 1-3B should be made of a material which does not impair the biological objects and, if appropriate, any reactions carried out with them in the receiving unit.
- the side walls of the plate 1 with respect to the vertical slightly, for example between 5 ° and 15 °, preferably 9 °, beveled, as this is the handling of the receiving unit when inserted into a Holder in a microscope arrangement or even when coupling with a multi-container element such as a microtiter plate as described below.
- the openings 2 can also open slightly to one side, preferably to the side from which the receiving unit is later filled with biological objects.
- the side walls of the openings 2 can be inclined at an angle of 2 ° to 7 °, preferably 4 °, with respect to the vertical.
- the individual openings of the receiving unit are labeled so as to facilitate, for example, logging which biological object is introduced into which opening.
- the inscription of the opening can correspond to that of the already mentioned assigned multi-container element.
- Such a label may for example denote the rows of openings 2 in Fig. 1 with letters A, B, etc. and the columns of openings with numbers 1, 2, 3, etc.
- FIG. 4A shows a first step of a method according to the invention for obtaining biological objects.
- a device corresponding to that already described in the introduction to the description with reference to FIG. 8 is used, in which a biological mass 6 is arranged on a transparent slide 7.
- a laser beam 9 generated by a laser 8 parts of the biological mass 6 can be cut out and then catapulted with a targeted laser pulse in a filled with the recording medium 3 opening 2 of the receiving unit of FIGS. 1 and 2.
- the recording unit according to the invention can be moved according to arrows B on the slide 7 to select an opening 2, in which a respective biological object 5 is to be catapulted.
- the method of laser pressure catapulting itself is explained in detail in the documents cited in the introduction to the description and will therefore not be described in detail here.
- the use of the receiving unit according to the invention offers the advantage of an optimal distance for the catapulting operation.
- a visual control of the biological objects 5 located in the openings 2 is possible in a simple manner, since the biological objects 5 are close enough to an objective also used to focus the laser beam 9 (not shown) in order to be able to focus on them and They can thus be observed through the lens.
- the biological objects can also be introduced in other ways into the openings 2 of the receiving unit, for example by pipetting.
- the receiving unit is then placed on an associated multi-container unit, for example a microtiter plate 10 with a plurality of containers or recesses 10A.
- the receiving unit is positioned such that in each case an opening 2 is arranged above a recess 10A.
- the placement of the receiving unit can in principle both be such that the biological objects 5 are remote from the microtiter plate 10, as well as such that they are facing her.
- the arrangement shown in Fig. 4B is inserted into a conventional microtiter centrifuge.
- the biological objects 5 are centrifuged together with the respective recording medium 3 into the respectively assigned containers 10A, which leads to the result shown in FIG. 4C.
- the recording medium 3 has only a small volume, essentially the entire volume of the containers 10A is available for subsequent processing steps of the biological objects 5 in the microtiter plate 10.
- the recording medium is preferably inert, it does not interfere with the following processing.
- the plate 1 can then either - in the case of a disposable plate - be disposed of or refilled with a recording medium after appropriate cleaning to be reused.
- a punch which presses the biological objects 5 together with the respective recording medium 3 in the associated container 10A.
- a punch may for example be in the form of a roll with corresponding nubs which are adapted to the openings 2, wherein the roll is rolled over the plate 1.
- the bottom 37 is preferably positioned on the side facing away from the microtiter plate 10, so that z. B. the centrifugation described above is readily possible.
- a single container whose container opening covers a plurality of openings 2 can be used if several biological objects 5 are to be further processed in a single container.
- FIG. 5A shows a section of the recording unit according to the invention of FIG. 3A after being loaded with biological objects 5.
- a digestive solution 11 is now added to the individual openings, which results in the biological objects 5 being "digested", which means that, for example, individual DNA strands 12 are present in the solution 11.
- These DNA strands 12 can then be combined are transferred into a microtiter plate with the solution 11 as described above.
- the receiving unit according to the invention from FIG. 2 on both sides or the receiving unit according to the invention from FIG. 3A or 3B is advantageously also on the upper side covered with a film 4 to avoid evaporation effects during heating.
- a suitable device is shown schematically in FIG.
- a film 4 is unwound from a roll 13 and pressed onto the plate 1 of the receiving unit.
- the film may either comprise adhesive so that it will adhere to the plate 1 automatically, or an additional adhesive may be used.
- the covering with the film 4 can be done automatically in a corresponding device or manually.
- a thicker, rigid film is also conceivable, which is placed on the plate 1 and attached to it e.g. is fixed by lamination.
- FIG. 7 an embodiment of a device according to the invention for cyclically heating a receiving unit according to the invention is shown.
- the device shown in Fig. 7 comprises a flat heating element 16 with openings 17 which are arranged according to the openings 2 of the plate 1 of the receiving unit according to the invention.
- the planar heating element 16 may be constructed, for example, from Peltier heating elements. But it is also conceivable to use a heating foil. If this is transparent, the openings 17 are dispensable.
- a control unit 20 controls or regulates a temperature of the planar heating element 16. For this purpose, for example, a desired temperature profile can be predetermined.
- the polymerase chain reaction typically a plurality of heating cycles with temperatures between about 96 ° C for the separation of double-stranded DNA, 37 ° C to 65 ° C for the attachment of so-called primers and DNA polymerase to the individual DNA strands and 65 ° C to 80 0 C for so-called elongation, in which the respectively missing second strand of DNA is generated, go through.
- the preferably covered with two sheets 4 as evaporation protection plate 1 is placed directly on the flat heating element 16.
- the collecting means 3 and / or additionally added substances 21 are added in the openings 2 of the plate 1 .
- a suitable hydrogel is used as the recording medium liquefies It is particularly advantageous if the substances required for the reaction to be carried out, in the case of the polymerase chain reaction, in particular the DNA polymerase, are incorporated in the hydrogel, in which case these substances become liquid during the liquefaction of the hydrogel This saves an additional step in which the substances 21 would have to be introduced into the openings 2, which reduces the risk of contamination. additionally or alternatively required substances 21 in a separate step before pipetting shown in Fig. 6 with foil in the openings 2.
- a lighting device with a light source 14 and an optical system 15 is provided, which preferably illuminates the plate 1 over its entire width. Furthermore, a detection device 18 with an evaluation unit 19 is provided.
- a fluorescent dye is added to the openings (either incorporated into the recording medium or separately), for example SYBR-Green, which is incorporated into the resulting DNA during the reaction in order to monitor the detection in real time.
- This dye is then excited by the illumination device 14, 15 to fluoresce, which are detected by the openings 17 in the planar heating element 16 of the detection device 18.
- the intensity of fluorescence is a measure of the number of DNA strands generated.
- the detection device 18 can be designed as a single planar detector, which measures the total fluorescence that arises in the openings 2.
- the evaluation unit 19 can determine the corresponding reaction sequence for each of the openings 2.
- the detection device 18 comprises a plurality of detection fields, each detection field being associated with an opening 2 of the plate 1.
- an individual detection of the course of the reaction in the individual openings 2 is possible.
- a CCD camera may be used as the detector.
- the fluorescence signal is conducted by means of glass fibers to corresponding detectors.
- the detection device 18 is designed as a scanner, which the individual openings 2, e.g. scanned sequentially by means of a lens.
- the evaluation unit 19 can determine the course of the reaction for each chamber separately.
- the illumination device 14, 15 would be arranged on the same side of the plate 1 as the detection device 18.
- the illustrated device for cyclic heating has the particular advantage that it very compact and in particular by the use of the recording unit according to the invention can be carried out flat, with a desired reaction in a plurality of openings 2 can take place simultaneously, which means a considerable time savings.
- a heating foil 16 is used instead of Peltier elements as a flat heating element 16, it can also be stretched directly on the plate 1 as a replacement for one of the foils 4.
- the plate 1 and the films 4 are made of a sufficiently thermally conductive material.
- the films 4 should also be translucent.
- the openings 2 of the receiving unit may be loaded with biological objects 5 other than by the described laser catapulting, for example by pipetting.
- the device of FIG. 7 is integrated in a microscope assembly for performing a laser microdissection or a laser catapulting, so that both the extraction and the further processing of the biological objects in a compact device can be carried out.
- the planar heating element 16 may be integrated in a holder for the receiving unit according to the invention.
- the device may comprise the device shown in Fig. 6 schematically for covering the plate 1 with the film 4.
- the reaction product in the case of the polymerase chain reaction also referred to as amplificate, can be transferred into a microtitre or multiwell plate according to the method shown in FIGS. 4A to 4C and further processed there. to be analyzed.
Abstract
Description
Claims
Applications Claiming Priority (2)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
DE200410041941 DE102004041941B4 (en) | 2004-08-30 | 2004-08-30 | Method for obtaining biological objects with a recording unit |
PCT/EP2005/008890 WO2006024392A2 (en) | 2004-08-30 | 2005-08-16 | Receiving unit for biological objects and method and device for treating biological objects placed in the receiving unit |
Publications (1)
Publication Number | Publication Date |
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EP1805495A2 true EP1805495A2 (en) | 2007-07-11 |
Family
ID=35295412
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
EP05774733A Withdrawn EP1805495A2 (en) | 2004-08-30 | 2005-08-16 | Receiving unit for biological objects and method and device for treating biological objects placed in the receiving unit |
Country Status (3)
Country | Link |
---|---|
EP (1) | EP1805495A2 (en) |
DE (1) | DE102004041941B4 (en) |
WO (1) | WO2006024392A2 (en) |
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WO2006024392A2 (en) | 2006-03-09 |
WO2006024392A3 (en) | 2006-06-01 |
DE102004041941B4 (en) | 2007-01-11 |
DE102004041941A1 (en) | 2006-03-02 |
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