DK3218519T3 - Multipass-sekvensering - Google Patents

Multipass-sekvensering Download PDF

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Publication number
DK3218519T3
DK3218519T3 DK15858699.0T DK15858699T DK3218519T3 DK 3218519 T3 DK3218519 T3 DK 3218519T3 DK 15858699 T DK15858699 T DK 15858699T DK 3218519 T3 DK3218519 T3 DK 3218519T3
Authority
DK
Denmark
Prior art keywords
multipass
sequence
multipass sequence
Prior art date
Application number
DK15858699.0T
Other languages
English (en)
Inventor
Y Tom Tang
Jing Yu
Hui Jiang
Wenwei Zhang
Guangyi Fan
He Zhang
Kailong Ma
Chunyu Geng
Handong Li
Original Assignee
Bgi Shenzhen
Bgi Shenzhen Co Ltd
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by Bgi Shenzhen, Bgi Shenzhen Co Ltd filed Critical Bgi Shenzhen
Application granted granted Critical
Publication of DK3218519T3 publication Critical patent/DK3218519T3/da

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Classifications

    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N27/00—Investigating or analysing materials by the use of electric, electrochemical, or magnetic means
    • G01N27/26—Investigating or analysing materials by the use of electric, electrochemical, or magnetic means by investigating electrochemical variables; by using electrolysis or electrophoresis
    • G01N27/416—Systems
    • G01N27/447—Systems using electrophoresis
    • G01N27/44756—Apparatus specially adapted therefor
    • G01N27/44791—Microapparatus
    • G—PHYSICS
    • G01—MEASURING; TESTING
    • G01N—INVESTIGATING OR ANALYSING MATERIALS BY DETERMINING THEIR CHEMICAL OR PHYSICAL PROPERTIES
    • G01N33/00—Investigating or analysing materials by specific methods not covered by groups G01N1/00 - G01N31/00
    • G01N33/48—Biological material, e.g. blood, urine; Haemocytometers
    • G01N33/483—Physical analysis of biological material
    • G01N33/487—Physical analysis of biological material of liquid biological material
    • G01N33/48707—Physical analysis of biological material of liquid biological material by electrical means
    • G01N33/48721—Investigating individual macromolecules, e.g. by translocation through nanopores

Landscapes

  • Life Sciences & Earth Sciences (AREA)
  • Chemical & Material Sciences (AREA)
  • Health & Medical Sciences (AREA)
  • Engineering & Computer Science (AREA)
  • Organic Chemistry (AREA)
  • Physics & Mathematics (AREA)
  • Proteomics, Peptides & Aminoacids (AREA)
  • Molecular Biology (AREA)
  • Wood Science & Technology (AREA)
  • Zoology (AREA)
  • Biochemistry (AREA)
  • Immunology (AREA)
  • General Health & Medical Sciences (AREA)
  • Analytical Chemistry (AREA)
  • Biomedical Technology (AREA)
  • Biophysics (AREA)
  • Bioinformatics & Cheminformatics (AREA)
  • General Engineering & Computer Science (AREA)
  • Microbiology (AREA)
  • Genetics & Genomics (AREA)
  • Biotechnology (AREA)
  • Pathology (AREA)
  • General Physics & Mathematics (AREA)
  • Chemical Kinetics & Catalysis (AREA)
  • Food Science & Technology (AREA)
  • Urology & Nephrology (AREA)
  • Medicinal Chemistry (AREA)
  • Hematology (AREA)
  • Spectroscopy & Molecular Physics (AREA)
  • Dispersion Chemistry (AREA)
  • Nanotechnology (AREA)
  • Electrochemistry (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
DK15858699.0T 2014-11-11 2015-11-10 Multipass-sekvensering DK3218519T3 (da)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US201462078306P 2014-11-11 2014-11-11
PCT/US2015/059903 WO2016077313A1 (en) 2014-11-11 2015-11-10 Multi-pass sequencing

Publications (1)

Publication Number Publication Date
DK3218519T3 true DK3218519T3 (da) 2020-12-21

Family

ID=55954931

Family Applications (1)

Application Number Title Priority Date Filing Date
DK15858699.0T DK3218519T3 (da) 2014-11-11 2015-11-10 Multipass-sekvensering

Country Status (5)

Country Link
US (1) US10626455B2 (da)
EP (1) EP3218519B1 (da)
CN (1) CN107002130B (da)
DK (1) DK3218519T3 (da)
WO (1) WO2016077313A1 (da)

Families Citing this family (36)

* Cited by examiner, † Cited by third party
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US9424392B2 (en) 2005-11-26 2016-08-23 Natera, Inc. System and method for cleaning noisy genetic data from target individuals using genetic data from genetically related individuals
US11111543B2 (en) 2005-07-29 2021-09-07 Natera, Inc. System and method for cleaning noisy genetic data and determining chromosome copy number
US11111544B2 (en) 2005-07-29 2021-09-07 Natera, Inc. System and method for cleaning noisy genetic data and determining chromosome copy number
US9677118B2 (en) 2014-04-21 2017-06-13 Natera, Inc. Methods for simultaneous amplification of target loci
US11408031B2 (en) 2010-05-18 2022-08-09 Natera, Inc. Methods for non-invasive prenatal paternity testing
US20190010543A1 (en) 2010-05-18 2019-01-10 Natera, Inc. Methods for simultaneous amplification of target loci
US11322224B2 (en) 2010-05-18 2022-05-03 Natera, Inc. Methods for non-invasive prenatal ploidy calling
EP2854057B1 (en) 2010-05-18 2018-03-07 Natera, Inc. Methods for non-invasive pre-natal ploidy calling
US11332785B2 (en) 2010-05-18 2022-05-17 Natera, Inc. Methods for non-invasive prenatal ploidy calling
US11339429B2 (en) 2010-05-18 2022-05-24 Natera, Inc. Methods for non-invasive prenatal ploidy calling
US11326208B2 (en) 2010-05-18 2022-05-10 Natera, Inc. Methods for nested PCR amplification of cell-free DNA
US11939634B2 (en) 2010-05-18 2024-03-26 Natera, Inc. Methods for simultaneous amplification of target loci
US11332793B2 (en) 2010-05-18 2022-05-17 Natera, Inc. Methods for simultaneous amplification of target loci
US10316362B2 (en) 2010-05-18 2019-06-11 Natera, Inc. Methods for simultaneous amplification of target loci
CA2821906C (en) 2010-12-22 2020-08-25 Natera, Inc. Methods for non-invasive prenatal paternity testing
JP6153874B2 (ja) 2011-02-09 2017-06-28 ナテラ， インコーポレイテッド 非侵襲的出生前倍数性呼び出しのための方法
US20140100126A1 (en) 2012-08-17 2014-04-10 Natera, Inc. Method for Non-Invasive Prenatal Testing Using Parental Mosaicism Data
CN106460070B (zh) 2014-04-21 2021-10-08 纳特拉公司 检测染色体片段中的突变和倍性
EP4428863A2 (en) 2015-05-11 2024-09-11 Natera, Inc. Methods and compositions for determining ploidy
TWI793586B (zh) * 2015-08-12 2023-02-21 香港中文大學 血漿dna之單分子定序
US11485996B2 (en) 2016-10-04 2022-11-01 Natera, Inc. Methods for characterizing copy number variation using proximity-litigation sequencing
US10011870B2 (en) 2016-12-07 2018-07-03 Natera, Inc. Compositions and methods for identifying nucleic acid molecules
US20200080143A1 (en) * 2017-05-14 2020-03-12 Foresee Genomic Ltd Dna construct for sequencing and method for preparing the same
SG11202001858PA (en) * 2017-10-09 2020-04-29 Psomagen Inc Single molecule sequencing and unique molecular identifiers to characterize nucleic acid sequences
US12084720B2 (en) 2017-12-14 2024-09-10 Natera, Inc. Assessing graft suitability for transplantation
CA3090426A1 (en) 2018-04-14 2019-10-17 Natera, Inc. Methods for cancer detection and monitoring by means of personalized detection of circulating tumor dna
US20210079461A1 (en) * 2018-04-20 2021-03-18 The Regents Of The University Of California Nucleic Acid Sequencing Methods and Computer-Readable Media for Practicing Same
US11525159B2 (en) 2018-07-03 2022-12-13 Natera, Inc. Methods for detection of donor-derived cell-free DNA
US20220002798A1 (en) * 2018-12-07 2022-01-06 Bgi Shenzhen Nanopore sequencing method
CN109852678A (zh) * 2019-03-01 2019-06-07 天津大学 基于碳纳米管和单链dna缠绕结构的dna测序方法
CN113646471A (zh) * 2019-09-20 2021-11-12 武汉华大医学检验所有限公司 测序文库的构建方法、测序方法及试剂盒和应用
CN113257351A (zh) * 2020-02-12 2021-08-13 赛纳生物科技(北京)有限公司 一种用于多碱基基因测序的基因文库及其构建方法
EP4103749A4 (en) * 2020-02-13 2024-03-13 Garvan Institute of Medical Research REFERENCE CONDUCTORS AND ADAPTERS
AU2021230282A1 (en) 2020-03-03 2022-09-22 Pacific Biosciences Of California, Inc. Methods and compositions for sequencing double stranded nucleic acids
CN117987522A (zh) * 2023-02-08 2024-05-07 深圳市真迈生物科技有限公司 测序方法
CN117987521A (zh) * 2023-02-08 2024-05-07 深圳市真迈生物科技有限公司 测序方法

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US20020197618A1 (en) * 2001-01-20 2002-12-26 Sampson Jeffrey R. Synthesis and amplification of unstructured nucleic acids for rapid sequencing
GB0504774D0 (en) * 2005-03-08 2005-04-13 Lingvitae As Method
US7901889B2 (en) 2007-07-26 2011-03-08 Pacific Biosciences Of California, Inc. Molecular redundant sequencing
CA2991818C (en) * 2008-03-28 2022-10-11 Pacific Biosciences Of California, Inc. Compositions and methods for nucleic acid sequencing
WO2010117470A2 (en) * 2009-04-10 2010-10-14 Pacific Biosciences Of California, Inc. Nanopore sequencing devices and methods
WO2012135658A2 (en) * 2011-03-30 2012-10-04 Noblegen Biosciences, Inc. Sequence preserved dna conversion for optical nanopore sequencing
KR20140050067A (ko) 2011-07-25 2014-04-28 옥스포드 나노포어 테크놀로지즈 리미티드 막횡단 포어를 사용한 이중 가닥 폴리뉴클레오티드 서열분석을 위한 헤어핀 루프 방법
US20130040827A1 (en) * 2011-08-14 2013-02-14 Stephen C. Macevicz Method and compositions for detecting and sequencing nucleic acids
WO2013049135A1 (en) * 2011-09-26 2013-04-04 Gen-Probe Incorporated Algorithms for sequence determinations
US20130296173A1 (en) * 2012-04-23 2013-11-07 Complete Genomics, Inc. Pre-anchor wash
US9116118B2 (en) * 2012-06-08 2015-08-25 Pacific Biosciences Of California, Inc. Modified base detection with nanopore sequencing
JP2014029594A (ja) * 2012-07-31 2014-02-13 Canon Inc 情報端末及びその制御方法、並びにプログラム
GB201313477D0 (en) 2013-07-29 2013-09-11 Univ Leuven Kath Nanopore biosensors for detection of proteins and nucleic acids

Also Published As

Publication number Publication date
US10626455B2 (en) 2020-04-21
EP3218519A1 (en) 2017-09-20
WO2016077313A1 (en) 2016-05-19
US20180282800A1 (en) 2018-10-04
EP3218519B1 (en) 2020-12-02
CN107002130B (zh) 2022-02-01
EP3218519A4 (en) 2018-07-25
CN107002130A (zh) 2017-08-01

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