DE69838911D1 - In-vitro Verfahren zur Bereitstellung von Fragmenten für die DNS Sequenzierung - Google Patents
In-vitro Verfahren zur Bereitstellung von Fragmenten für die DNS SequenzierungInfo
- Publication number
- DE69838911D1 DE69838911D1 DE69838911T DE69838911T DE69838911D1 DE 69838911 D1 DE69838911 D1 DE 69838911D1 DE 69838911 T DE69838911 T DE 69838911T DE 69838911 T DE69838911 T DE 69838911T DE 69838911 D1 DE69838911 D1 DE 69838911D1
- Authority
- DE
- Germany
- Prior art keywords
- dna
- reaction
- vitro method
- dna sequencing
- transposon
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Expired - Lifetime
Links
- 238000001712 DNA sequencing Methods 0.000 title abstract 2
- 238000000338 in vitro Methods 0.000 title abstract 2
- 238000000034 method Methods 0.000 title abstract 2
- 239000012634 fragment Substances 0.000 title 1
- 230000003321 amplification Effects 0.000 abstract 3
- 238000003199 nucleic acid amplification method Methods 0.000 abstract 3
- 230000000295 complement effect Effects 0.000 abstract 1
- 238000010187 selection method Methods 0.000 abstract 1
- 238000012163 sequencing technique Methods 0.000 abstract 1
- 230000017105 transposition Effects 0.000 abstract 1
- 230000013819 transposition, DNA-mediated Effects 0.000 abstract 1
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
- C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
- C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
- C12Q1/6869—Methods for sequencing
Landscapes
- Life Sciences & Earth Sciences (AREA)
- Chemical & Material Sciences (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Organic Chemistry (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Health & Medical Sciences (AREA)
- Engineering & Computer Science (AREA)
- Microbiology (AREA)
- Immunology (AREA)
- Biotechnology (AREA)
- Molecular Biology (AREA)
- Biophysics (AREA)
- Analytical Chemistry (AREA)
- Physics & Mathematics (AREA)
- Biochemistry (AREA)
- Bioinformatics & Cheminformatics (AREA)
- General Engineering & Computer Science (AREA)
- General Health & Medical Sciences (AREA)
- Genetics & Genomics (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Applications Claiming Priority (2)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| FI972992A FI103809B1 (fi) | 1997-07-14 | 1997-07-14 | In vitro -menetelmä templaattien tuottamiseksi DNA-sekventointia varten |
| PCT/FI1998/000586 WO1999004035A1 (en) | 1997-07-14 | 1998-07-10 | In vitro method for providing templates for dna sequencing |
Publications (1)
| Publication Number | Publication Date |
|---|---|
| DE69838911D1 true DE69838911D1 (de) | 2008-02-07 |
Family
ID=8549258
Family Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| DE69838911T Expired - Lifetime DE69838911D1 (de) | 1997-07-14 | 1998-07-10 | In-vitro Verfahren zur Bereitstellung von Fragmenten für die DNS Sequenzierung |
Country Status (9)
| Country | Link |
|---|---|
| US (1) | US6593113B1 (de) |
| EP (1) | EP1005571B1 (de) |
| JP (1) | JP2001510055A (de) |
| AT (1) | ATE382095T1 (de) |
| AU (1) | AU738345B2 (de) |
| CA (1) | CA2295968C (de) |
| DE (1) | DE69838911D1 (de) |
| FI (1) | FI103809B1 (de) |
| WO (1) | WO1999004035A1 (de) |
Families Citing this family (55)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US7727744B2 (en) * | 2004-03-30 | 2010-06-01 | Epicentre Technologies Corporation | Methods for obtaining directionally truncated polypeptides |
| CA2693979A1 (en) | 2007-07-26 | 2009-02-05 | Pacific Biosciences Of California, Inc. | Molecular redundant sequencing |
| US8383345B2 (en) | 2008-09-12 | 2013-02-26 | University Of Washington | Sequence tag directed subassembly of short sequencing reads into long sequencing reads |
| EP2787565B1 (de) * | 2008-10-24 | 2015-09-16 | Epicentre Technologies Corporation | Transposonendenzusammensetzungen und Verfahren zur Modifizierung von Nukleinsäuren |
| US9080211B2 (en) | 2008-10-24 | 2015-07-14 | Epicentre Technologies Corporation | Transposon end compositions and methods for modifying nucleic acids |
| US8829171B2 (en) | 2011-02-10 | 2014-09-09 | Illumina, Inc. | Linking sequence reads using paired code tags |
| US9074251B2 (en) | 2011-02-10 | 2015-07-07 | Illumina, Inc. | Linking sequence reads using paired code tags |
| WO2012061832A1 (en) * | 2010-11-05 | 2012-05-10 | Illumina, Inc. | Linking sequence reads using paired code tags |
| AU2012211081B2 (en) | 2011-01-28 | 2016-02-04 | Illumina, Inc. | Oligonucleotide replacement for di-tagged and directional libraries |
| CA2826131C (en) | 2011-02-02 | 2019-11-05 | Jay Ashok Shendure | Massively parallel continguity mapping |
| US20130017978A1 (en) | 2011-07-11 | 2013-01-17 | Finnzymes Oy | Methods and transposon nucleic acids for generating a dna library |
| US9145623B2 (en) | 2011-07-20 | 2015-09-29 | Thermo Fisher Scientific Oy | Transposon nucleic acids comprising a calibration sequence for DNA sequencing |
| US20140155295A1 (en) | 2012-08-14 | 2014-06-05 | 10X Technologies, Inc. | Capsule array devices and methods of use |
| US10221442B2 (en) | 2012-08-14 | 2019-03-05 | 10X Genomics, Inc. | Compositions and methods for sample processing |
| US10273541B2 (en) | 2012-08-14 | 2019-04-30 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US10400280B2 (en) | 2012-08-14 | 2019-09-03 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US10323279B2 (en) | 2012-08-14 | 2019-06-18 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US10752949B2 (en) | 2012-08-14 | 2020-08-25 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US11591637B2 (en) | 2012-08-14 | 2023-02-28 | 10X Genomics, Inc. | Compositions and methods for sample processing |
| US9701998B2 (en) | 2012-12-14 | 2017-07-11 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US9951386B2 (en) | 2014-06-26 | 2018-04-24 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US10533221B2 (en) | 2012-12-14 | 2020-01-14 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| EP3567116A1 (de) | 2012-12-14 | 2019-11-13 | 10X Genomics, Inc. | Verfahren und systeme zur verarbeitung von polynukleotiden |
| US9683230B2 (en) | 2013-01-09 | 2017-06-20 | Illumina Cambridge Limited | Sample preparation on a solid support |
| WO2014124338A1 (en) | 2013-02-08 | 2014-08-14 | 10X Technologies, Inc. | Polynucleotide barcode generation |
| ES2724824T3 (es) | 2013-03-13 | 2019-09-16 | Illumina Inc | Métodos para la secuenciación de ácidos nucleicos |
| CN105339503B (zh) | 2013-05-23 | 2020-04-10 | 斯坦福大学托管董事会 | 用于个人表观基因组学的至天然染色质的转座 |
| DK3083994T3 (da) | 2013-12-20 | 2021-09-13 | Illumina Inc | Bevarelse af genomisk konnektivitetsinformation i fragmenterede genomiske DNA-prøver |
| WO2015113725A1 (en) | 2014-02-03 | 2015-08-06 | Thermo Fisher Scientific Baltics Uab | Method for controlled dna fragmentation |
| US11136576B2 (en) | 2014-02-03 | 2021-10-05 | Thermo Fisher Scientific Baltics Uab | Method for controlled DNA fragmentation |
| WO2015157567A1 (en) | 2014-04-10 | 2015-10-15 | 10X Genomics, Inc. | Fluidic devices, systems, and methods for encapsulating and partitioning reagents, and applications of same |
| MX2016016902A (es) | 2014-06-26 | 2017-03-27 | 10X Genomics Inc | Metodos para analizar acidos nucleicos de celulas individuales o poblaciones de celulas. |
| JP6808617B2 (ja) | 2014-10-17 | 2021-01-06 | イルミナ ケンブリッジ リミテッド | 連続性を維持した転位 |
| CN114807307A (zh) | 2014-10-29 | 2022-07-29 | 10X 基因组学有限公司 | 用于靶核酸测序的方法和组合物 |
| US9975122B2 (en) | 2014-11-05 | 2018-05-22 | 10X Genomics, Inc. | Instrument systems for integrated sample processing |
| ES2947757T3 (es) * | 2014-11-05 | 2023-08-18 | Illumina Inc | Composiciones de transposasas para reducir el sesgo de inserción |
| CN107427808B (zh) | 2015-01-12 | 2020-10-23 | 10X基因组学有限公司 | 用于制备核酸测序文库的方法和系统以及用其制备的文库 |
| US10697000B2 (en) | 2015-02-24 | 2020-06-30 | 10X Genomics, Inc. | Partition processing methods and systems |
| WO2016138148A1 (en) | 2015-02-24 | 2016-09-01 | 10X Genomics, Inc. | Methods for targeted nucleic acid sequence coverage |
| CN107849600A (zh) | 2015-06-09 | 2018-03-27 | 生命技术公司 | 用于分子标记的方法、系统、组合物、试剂盒、装置和计算机可读媒体 |
| ES2926495T3 (es) | 2015-12-04 | 2022-10-26 | 10X Genomics Inc | Métodos y composiciones para el análisis de ácidos nucleicos |
| WO2017197338A1 (en) | 2016-05-13 | 2017-11-16 | 10X Genomics, Inc. | Microfluidic systems and methods of use |
| US10815525B2 (en) | 2016-12-22 | 2020-10-27 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US10011872B1 (en) | 2016-12-22 | 2018-07-03 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| US10550429B2 (en) | 2016-12-22 | 2020-02-04 | 10X Genomics, Inc. | Methods and systems for processing polynucleotides |
| EP4095263A1 (de) | 2017-01-06 | 2022-11-30 | Editas Medicine, Inc. | Verfahren zur beurteilung der nukleasespaltung |
| CN117512066A (zh) | 2017-01-30 | 2024-02-06 | 10X基因组学有限公司 | 用于基于微滴的单细胞条形编码的方法和系统 |
| US10400235B2 (en) | 2017-05-26 | 2019-09-03 | 10X Genomics, Inc. | Single cell analysis of transposase accessible chromatin |
| CN109526228B (zh) | 2017-05-26 | 2022-11-25 | 10X基因组学有限公司 | 转座酶可接近性染色质的单细胞分析 |
| EP3652312A1 (de) | 2017-07-14 | 2020-05-20 | Editas Medicine, Inc. | Systeme und verfahren zur gezielten integration und genomeditierung und deren detektion unter verwendung von integrierten bindungsstellen |
| WO2019099751A1 (en) | 2017-11-15 | 2019-05-23 | 10X Genomics, Inc. | Functionalized gel beads |
| US10829815B2 (en) | 2017-11-17 | 2020-11-10 | 10X Genomics, Inc. | Methods and systems for associating physical and genetic properties of biological particles |
| EP3746554A1 (de) | 2018-01-30 | 2020-12-09 | Editas Medicine, Inc. | Systeme und verfahren zur modulierung chromosomaler neuanordnungen |
| EP3775271A1 (de) | 2018-04-06 | 2021-02-17 | 10X Genomics, Inc. | Systeme und verfahren zur qualitätskontrolle in einer einzelzellenverarbeitung |
| WO2023225095A1 (en) | 2022-05-18 | 2023-11-23 | Illumina Cambridge Limited | Preparation of size-controlled nucleic acid fragments |
Family Cites Families (1)
| Publication number | Priority date | Publication date | Assignee | Title |
|---|---|---|---|---|
| US5677170A (en) | 1994-03-02 | 1997-10-14 | The Johns Hopkins University | In vitro transposition of artificial transposons |
-
1997
- 1997-07-14 FI FI972992A patent/FI103809B1/fi not_active IP Right Cessation
-
1998
- 1998-07-10 DE DE69838911T patent/DE69838911D1/de not_active Expired - Lifetime
- 1998-07-10 EP EP98935045A patent/EP1005571B1/de not_active Expired - Lifetime
- 1998-07-10 US US09/462,013 patent/US6593113B1/en not_active Expired - Lifetime
- 1998-07-10 WO PCT/FI1998/000586 patent/WO1999004035A1/en active IP Right Grant
- 1998-07-10 JP JP2000503240A patent/JP2001510055A/ja active Pending
- 1998-07-10 AT AT98935045T patent/ATE382095T1/de not_active IP Right Cessation
- 1998-07-10 AU AU84429/98A patent/AU738345B2/en not_active Expired
- 1998-07-10 CA CA002295968A patent/CA2295968C/en not_active Expired - Lifetime
Also Published As
| Publication number | Publication date |
|---|---|
| FI972992A (fi) | 1999-01-15 |
| CA2295968C (en) | 2008-11-25 |
| WO1999004035A1 (en) | 1999-01-28 |
| ATE382095T1 (de) | 2008-01-15 |
| CA2295968A1 (en) | 1999-01-28 |
| US6593113B1 (en) | 2003-07-15 |
| FI103809B (fi) | 1999-09-30 |
| AU738345B2 (en) | 2001-09-13 |
| JP2001510055A (ja) | 2001-07-31 |
| FI972992A0 (fi) | 1997-07-14 |
| EP1005571B1 (de) | 2007-12-26 |
| AU8442998A (en) | 1999-02-10 |
| FI103809B1 (fi) | 1999-09-30 |
| EP1005571A1 (de) | 2000-06-07 |
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Legal Events
| Date | Code | Title | Description |
|---|---|---|---|
| 8332 | No legal effect for de |