DE60334639D1 - Kassetten mit heterozyklischenfret-farbstoffen zur markierung biologischer moleküle und ihre verwendung beider sequenzierung von dna - Google Patents

Kassetten mit heterozyklischenfret-farbstoffen zur markierung biologischer moleküle und ihre verwendung beider sequenzierung von dna

Info

Publication number
DE60334639D1
DE60334639D1 DE60334639T DE60334639T DE60334639D1 DE 60334639 D1 DE60334639 D1 DE 60334639D1 DE 60334639 T DE60334639 T DE 60334639T DE 60334639 T DE60334639 T DE 60334639T DE 60334639 D1 DE60334639 D1 DE 60334639D1
Authority
DE
Germany
Prior art keywords
cassettes
heterocyclic
biological molecules
fret
sequencing dna
Prior art date
Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
Expired - Lifetime
Application number
DE60334639T
Other languages
English (en)
Inventor
Satyam Nampalli
Weihong Zhang
Sudhakar Rao
Shiv Kumar
Current Assignee (The listed assignees may be inaccurate. Google has not performed a legal analysis and makes no representation or warranty as to the accuracy of the list.)
Cytiva Sweden AB
Global Life Sciences Solutions USA LLC
Original Assignee
GE Healthcare Bio Sciences AB
GE Healthcare Bio Sciences Corp
Priority date (The priority date is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the date listed.)
Filing date
Publication date
Application filed by GE Healthcare Bio Sciences AB, GE Healthcare Bio Sciences Corp filed Critical GE Healthcare Bio Sciences AB
Application granted granted Critical
Publication of DE60334639D1 publication Critical patent/DE60334639D1/de
Anticipated expiration legal-status Critical
Expired - Lifetime legal-status Critical Current

Links

Classifications

    • C—CHEMISTRY; METALLURGY
    • C09—DYES; PAINTS; POLISHES; NATURAL RESINS; ADHESIVES; COMPOSITIONS NOT OTHERWISE PROVIDED FOR; APPLICATIONS OF MATERIALS NOT OTHERWISE PROVIDED FOR
    • C09B—ORGANIC DYES OR CLOSELY-RELATED COMPOUNDS FOR PRODUCING DYES, e.g. PIGMENTS; MORDANTS; LAKES
    • C09B23/00—Methine or polymethine dyes, e.g. cyanine dyes
    • C09B23/02—Methine or polymethine dyes, e.g. cyanine dyes the polymethine chain containing an odd number of >CH- or >C[alkyl]- groups
    • C09B23/08—Methine or polymethine dyes, e.g. cyanine dyes the polymethine chain containing an odd number of >CH- or >C[alkyl]- groups more than three >CH- groups, e.g. polycarbocyanines
    • C09B23/083—Methine or polymethine dyes, e.g. cyanine dyes the polymethine chain containing an odd number of >CH- or >C[alkyl]- groups more than three >CH- groups, e.g. polycarbocyanines five >CH- groups
    • C—CHEMISTRY; METALLURGY
    • C09—DYES; PAINTS; POLISHES; NATURAL RESINS; ADHESIVES; COMPOSITIONS NOT OTHERWISE PROVIDED FOR; APPLICATIONS OF MATERIALS NOT OTHERWISE PROVIDED FOR
    • C09B—ORGANIC DYES OR CLOSELY-RELATED COMPOUNDS FOR PRODUCING DYES, e.g. PIGMENTS; MORDANTS; LAKES
    • C09B11/00—Diaryl- or thriarylmethane dyes
    • C09B11/04—Diaryl- or thriarylmethane dyes derived from triarylmethanes, i.e. central C-atom is substituted by amino, cyano, alkyl
    • C09B11/06—Hydroxy derivatives of triarylmethanes in which at least one OH group is bound to an aryl nucleus and their ethers or esters
    • C09B11/08—Phthaleins; Phenolphthaleins; Fluorescein
    • C—CHEMISTRY; METALLURGY
    • C09—DYES; PAINTS; POLISHES; NATURAL RESINS; ADHESIVES; COMPOSITIONS NOT OTHERWISE PROVIDED FOR; APPLICATIONS OF MATERIALS NOT OTHERWISE PROVIDED FOR
    • C09B—ORGANIC DYES OR CLOSELY-RELATED COMPOUNDS FOR PRODUCING DYES, e.g. PIGMENTS; MORDANTS; LAKES
    • C09B11/00—Diaryl- or thriarylmethane dyes
    • C09B11/04—Diaryl- or thriarylmethane dyes derived from triarylmethanes, i.e. central C-atom is substituted by amino, cyano, alkyl
    • C09B11/10—Amino derivatives of triarylmethanes
    • C09B11/24—Phthaleins containing amino groups ; Phthalanes; Fluoranes; Phthalides; Rhodamine dyes; Phthaleins having heterocyclic aryl rings; Lactone or lactame forms of triarylmethane dyes
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6813—Hybridisation assays
    • C12Q1/6816—Hybridisation assays characterised by the detection means
    • C12Q1/6818—Hybridisation assays characterised by the detection means involving interaction of two or more labels, e.g. resonant energy transfer
    • C—CHEMISTRY; METALLURGY
    • C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
    • C12Q—MEASURING OR TESTING PROCESSES INVOLVING ENZYMES, NUCLEIC ACIDS OR MICROORGANISMS; COMPOSITIONS OR TEST PAPERS THEREFOR; PROCESSES OF PREPARING SUCH COMPOSITIONS; CONDITION-RESPONSIVE CONTROL IN MICROBIOLOGICAL OR ENZYMOLOGICAL PROCESSES
    • C12Q1/00—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions
    • C12Q1/68—Measuring or testing processes involving enzymes, nucleic acids or microorganisms; Compositions therefor; Processes of preparing such compositions involving nucleic acids
    • C12Q1/6869—Methods for sequencing

Landscapes

  • Chemical & Material Sciences (AREA)
  • Organic Chemistry (AREA)
  • Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
  • Investigating Or Analysing Biological Materials (AREA)
  • Nitrogen Condensed Heterocyclic Rings (AREA)
  • Saccharide Compounds (AREA)
  • Plural Heterocyclic Compounds (AREA)
DE60334639T 2002-12-20 2003-12-17 Kassetten mit heterozyklischenfret-farbstoffen zur markierung biologischer moleküle und ihre verwendung beider sequenzierung von dna Expired - Lifetime DE60334639D1 (de)

Applications Claiming Priority (2)

Application Number Priority Date Filing Date Title
US10/326,039 US6855503B2 (en) 2002-12-20 2002-12-20 Heterocyclic FRETdye cassettes for labeling biological molecules and their use in DNA sequencing
PCT/US2003/040573 WO2004059011A1 (en) 2002-12-20 2003-12-17 Heterocyclic fret dye cassettes for labeling biological molecules and their use in dna sequencing

Publications (1)

Publication Number Publication Date
DE60334639D1 true DE60334639D1 (de) 2010-12-02

Family

ID=32654253

Family Applications (1)

Application Number Title Priority Date Filing Date
DE60334639T Expired - Lifetime DE60334639D1 (de) 2002-12-20 2003-12-17 Kassetten mit heterozyklischenfret-farbstoffen zur markierung biologischer moleküle und ihre verwendung beider sequenzierung von dna

Country Status (7)

Country Link
US (1) US6855503B2 (de)
EP (1) EP1573068B1 (de)
JP (1) JP2006511581A (de)
AT (1) ATE485392T1 (de)
AU (1) AU2003301116A1 (de)
DE (1) DE60334639D1 (de)
WO (1) WO2004059011A1 (de)

Families Citing this family (18)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US7570443B2 (en) 2003-09-19 2009-08-04 Applied Biosystems, Llc Optical camera alignment
US7417726B2 (en) * 2003-09-19 2008-08-26 Applied Biosystems Inc. Normalization of data using controls
US20060029948A1 (en) * 2003-09-19 2006-02-09 Gary Lim Sealing cover and dye compatibility selection
US7169560B2 (en) * 2003-11-12 2007-01-30 Helicos Biosciences Corporation Short cycle methods for sequencing polynucleotides
WO2005077125A2 (en) * 2004-02-11 2005-08-25 Applera Corporation Methods and compositions for detecting nucleic acids
US20050255485A1 (en) * 2004-05-14 2005-11-17 Livak Kenneth J Detection of gene duplications
EP1802727B1 (de) 2004-09-16 2018-04-04 Life Technologies Corporation Fluoreszierende farbstoffverbindungen, konjugate und ihre verwendungen
WO2006113915A2 (en) * 2005-04-20 2006-10-26 Board Of Regents, The University Of Texas System Ultrasensitive detection of prions by automated protein misfolding cyclic amplification
JP2008541055A (ja) * 2005-05-03 2008-11-20 アプレラ コーポレイション 蛍光検出システムおよびそれとともに使用するための色素セット
JP4963015B2 (ja) * 2005-07-28 2012-06-27 学校法人日本大学 ヌクレオチド誘導体及びその利用
WO2008030973A2 (en) * 2006-09-06 2008-03-13 The Board Of Regents Of The University Of Texas System Methods and compositions for the detection of protein folding disorders
US20090253161A1 (en) * 2008-04-03 2009-10-08 Duke University Fluorescent prochelators for cellular iron detection
CA2827865C (en) * 2011-03-10 2016-01-05 Air Products And Chemicals, Inc. Oxy-fuel burner arrangement
WO2016149537A1 (en) 2015-03-17 2016-09-22 The United States Of America, As Represented By The Secretary, Department Of Health And Human Services Bank vole prion protein as a broad-spectrum substrate for rt-quic-based detection and discrimination of prion strains
EP3475701B1 (de) * 2016-06-28 2023-02-22 Ventana Medical Systems, Inc. Neue farben für chromogene ihc- und ish-färbung mit mehrfachfarbstoff-chinon-methid- und tyramid-konjugaten
CN109641922A (zh) * 2016-06-28 2019-04-16 文塔纳医疗系统公司 点击化学用于ihc和ish测定中的信号扩增的应用
WO2018126180A1 (en) 2016-12-30 2018-07-05 The United States Of America, As Represented By The Secretary, Department Of Health And Human Services Methods for the detection of tau protein aggregates
CA3074914A1 (en) 2017-10-02 2019-04-11 The United States Of America, As Represented By The Secretary, Department Of Health And Human Services Assay for the detection of alpha-synuclein seeding activity associated with synucleinopathies

Family Cites Families (3)

* Cited by examiner, † Cited by third party
Publication number Priority date Publication date Assignee Title
US6008373A (en) 1995-06-07 1999-12-28 Carnegie Mellon University Fluorescent labeling complexes with large stokes shift formed by coupling together cyanine and other fluorochromes capable of resonance energy transfer
US5863727A (en) 1996-05-03 1999-01-26 The Perkin-Elmer Corporation Energy transfer dyes with enhanced fluorescence
US5853992A (en) 1996-10-04 1998-12-29 The Regents Of The University Of California Cyanine dyes with high-absorbance cross section as donor chromophores in energy transfer labels

Also Published As

Publication number Publication date
US20040126763A1 (en) 2004-07-01
AU2003301116A1 (en) 2004-07-22
EP1573068A4 (de) 2006-01-04
WO2004059011A1 (en) 2004-07-15
EP1573068B1 (de) 2010-10-20
EP1573068A1 (de) 2005-09-14
ATE485392T1 (de) 2010-11-15
US6855503B2 (en) 2005-02-15
JP2006511581A (ja) 2006-04-06

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