CN115725390A - System for full-automatic sectional type of normal position is enriched water environment DNA - Google Patents
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Abstract
Description
技术领域technical field
本发明涉及水生态研究和监控领域,更特别地,涉及一种可用于富集水体环境DNA的系统。The invention relates to the field of water ecology research and monitoring, and more particularly relates to a system that can be used for enriching water environment DNA.
背景技术Background technique
水生态健康诊断,是环境保护、治理和恢复的重要一环。水生生物是评价水环境的重要指标。由于水中的浮游生物尤其是较大型的浮游动物分布不均匀,因此,即便采集较大体积的水样进行浮游生物分析仍然不足以对水体浮游生物进行完全统计。为了弥补该问题,水环境监测中往往还对水样中的环境DNA(eDNA)进行分析。水体中的环境DNA包括游离的DNA和浮游生物中体内的DNA。通过检测和分析水体中的环境DNA可用来指示水体中的物种组成,表征水生态系统健康状况。Water ecological health diagnosis is an important part of environmental protection, governance and restoration. Aquatic organisms are an important index to evaluate the water environment. Due to the uneven distribution of plankton in the water, especially the larger zooplankton, even if a large volume of water samples is collected for plankton analysis, it is still not enough to make a complete statistics of the plankton in the water body. In order to make up for this problem, environmental DNA (eDNA) in water samples is often analyzed in water environment monitoring. Environmental DNA in water includes free DNA and in vivo DNA in plankton. The detection and analysis of environmental DNA in water bodies can be used to indicate the composition of species in water bodies and characterize the health of aquatic ecosystems.
目前,往往通过收集水体中的浮游生物,然后裂解提取DNA,以获得环境DNA,但是这种方式往往忽略了环境中本身游离的DNA组成,该部分主要用于水域鱼类等多样性监测与评估。可使用DNA富集材料来富集水中的游离DNA,但是由于水体中游离的DNA浓度本来十分低。同样地,现有的水环境DNA富集装置不能很好地收集丰度较低的浮游生物。要取得这部分DNA和浮游生物,需要对大量水样进行富集,但是将大体积的水样运回实验室进行富集,既不方便,也在运输途中发生污染。进一步地,如果游离DNA富集用的水中含有太多颗粒物(例如浮游生物),会影响到DNA富集装置的富集效果和使用寿命。At present, environmental DNA is often obtained by collecting plankton in the water body, and then cracking and extracting DNA. However, this method often ignores the free DNA composition in the environment itself. This part is mainly used for monitoring and evaluating the diversity of fish in water areas. . DNA enrichment materials can be used to enrich free DNA in water, but the concentration of free DNA in water is very low. Likewise, existing devices for DNA enrichment in aquatic environments do not work well for collecting lower-abundance plankton. To obtain this part of DNA and plankton, a large number of water samples need to be enriched, but it is inconvenient to transport large volumes of water samples back to the laboratory for enrichment, and pollution occurs during transportation. Further, if the water used for free DNA enrichment contains too many particles (such as plankton), the enrichment effect and service life of the DNA enrichment device will be affected.
因此,需要构建一种原位全自动分段式富集水体环境DNA的系统。Therefore, it is necessary to construct an in-situ, fully automatic and segmented enrichment system for environmental DNA in water.
发明内容Contents of the invention
为解决以上问题,本发明提供了一种原位全自动分段式富集水体环境DNA的系统,包括水样吸头、一级分离装置、二级分离装置、三级分离装置、DNA富集装置、循环水容器和浮游生物样品收集装置,以及中央控制器;In order to solve the above problems, the present invention provides an in-situ fully automatic segmented enrichment system for water environment DNA, including a water sample tip, a primary separation device, a secondary separation device, a tertiary separation device, a DNA enrichment device, Circulating water container and plankton sample collection device, and central controller;
所述水样吸头的出水口与所述一级分离装置的一个进水口连接,所述一级分离装置的滤液出口与所述二级分离装置的进水口连接,所述二级分离装置的滤液出口与所述三级分离装置的进水口连接,所述三级分离装置的滤液出口与所述DNA富集装置进水口连接,所述DNA富集装置的一个出水口与所述循环水容器的进水口连接,所述循环水容器的一个出水口与所述一级分离装置的一个进水口连接;The water outlet of the water sample tip is connected to a water inlet of the first-level separation device, and the filtrate outlet of the first-level separation device is connected to the water inlet of the second-level separation device. The filtrate outlet is connected to the water inlet of the three-stage separation device, the filtrate outlet of the three-stage separation device is connected to the water inlet of the DNA enrichment device, and a water outlet of the DNA enrichment device is connected to the circulating water container The water inlet is connected, and a water outlet of the circulating water container is connected with a water inlet of the first-stage separation device;
所述中央控制器与所述水样吸头、一级分离装置、二级分离装置、三级分离装置、DNA富集装置和循环水容器和浮游生物样品收集装置通信连接。The central controller is in communication connection with the water sample suction head, primary separation device, secondary separation device, tertiary separation device, DNA enrichment device, circulating water container and plankton sample collection device.
通过本发明的系统,可原位将大量水样进行浓缩富集成极小体积的浮游生物浓缩液和游离DNA富集溶液,两者可方便地运送至有条件的实验室进行进一步地分析,从而获得完整的环境DNA信息,以及浮游生物分类信息,是优良的水环境监测工具。通过大体积富集提取游离DNA,规避了捕获鱼类等对生态系统的潜在影响,为大型水生生物多样性诊断提供一种非损伤式监测方法。Through the system of the present invention, a large amount of water samples can be concentrated and enriched in situ into a very small volume of plankton concentrate and free DNA enrichment solution, both of which can be conveniently transported to a qualified laboratory for further analysis, thereby Obtaining complete environmental DNA information and plankton classification information is an excellent water environment monitoring tool. Extraction of cell-free DNA through large-volume enrichment avoids the potential impact of fish capture on the ecosystem, and provides a non-destructive monitoring method for the diagnosis of large-scale aquatic biodiversity.
本发明的系统可布置在预先选好的水域监测点,实现在例如一年甚至更长的时间内定期取水样用于富集环境DNA,富集得到的环境DNA样品体积小方便携带,可容易地在每次或数次富集完成后将环境DNA样品转移至实验室进行相关检测和分析。从而实现长期监测目标水域中的生物多样性情况,并作为水环境的因子之一纳入水生态评价体系。The system of the present invention can be arranged at pre-selected water area monitoring points, so that water samples can be taken regularly for enrichment of environmental DNA in a year or even longer, and the environmental DNA samples obtained by enrichment are small and easy to carry, and can It is easy to transfer the environmental DNA sample to the laboratory for relevant detection and analysis after each or several enrichments are completed. In this way, the long-term monitoring of the biodiversity in the target waters can be realized, and it can be included in the water ecological evaluation system as one of the factors of the water environment.
在一个具体实施方案中,所述一级分离装置包括壳体和过滤组件;In a specific embodiment, the primary separation device includes a housing and a filter assembly;
所述壳体由水密性材料制成,将所述过滤组件包裹在内部空间;The housing is made of watertight material, wrapping the filter assembly in the inner space;
所述过滤组件包括圆柱形的过滤区和电机,所述电机设置在所述壳体顶部的内壁上,并与所述过滤部顶部的外壁连接,所述电机转动可带动所述过滤区旋转,所述过滤区的侧壁设置为筛网结构;The filter assembly includes a cylindrical filter area and a motor, the motor is arranged on the inner wall of the top of the housing and connected to the outer wall of the top of the filter part, the rotation of the motor can drive the filter area to rotate, The side wall of the filter area is set as a screen structure;
所述过滤区顶部中央设置有进水口,穿过所述壳体,通过管道分别与所述水样吸头和所述循环水容器;A water inlet is provided in the center of the top of the filter area, passing through the housing, and connecting with the water sample suction head and the circulating water container through pipes;
所述过滤区底部设置有下凹的富集区,所述富集区底部设置有浮游生物浓缩液出口,所述浮游生物浓缩液出口穿过所述壳体并通过管道与所述浮游生物样品收集装置连接;The bottom of the filter area is provided with a concave enrichment area, and the bottom of the enrichment area is provided with a plankton concentrate outlet, and the plankton concentrate outlet passes through the shell and connects with the plankton sample through a pipeline. collection device connection;
所述壳体底部还设置有滤液出口,通过管道与所述二级分离装置的进水口连接。所述过滤区的侧壁筛网结构的孔径设置为20-64μm,其中64μm为水质水生生物监测常用浮游生物网(25号网)的尺寸,正常水体中的绝大部分浮游生物都被包含在该级分中。对于颗粒物含量低的水体,可提高孔径至20μm,从而充分发挥横流场高分离性能,降低第二级分离压力。其中64μm为水质水生生物监测常用浮游生物网(25号网)的尺寸。该级分离原理采用横流场分离,性能高。对于颗粒物含量低的水体,可提高孔径至20μm,从而充分发挥横流场分离性能,降低第二级分离压力。The bottom of the housing is also provided with a filtrate outlet, which is connected to the water inlet of the secondary separation device through a pipeline. The pore size of the sidewall screen structure of the filter area is set to 20-64 μm, wherein 64 μm is the size of a commonly used plankton net (No. 25 net) for water quality aquatic life monitoring, and most of the plankton in normal water bodies are contained in the in this fraction. For water bodies with low particle content, the pore size can be increased to 20 μm, so as to give full play to the high separation performance of the cross-flow field and reduce the second-stage separation pressure. Among them, 64 μm is the size of plankton net (No. 25 net) commonly used in water quality aquatic life monitoring. The separation principle of this stage adopts cross-flow field separation with high performance. For water bodies with low particle content, the pore size can be increased to 20 μm, so as to fully exert the cross-flow field separation performance and reduce the second-stage separation pressure.
在一个具体实施方案中,所述二级分离装置和所述三级分离装置均带有反冲洗部的超滤装置,并且所述二级分离装置的过滤孔径大于所述三级分离装置。优选地,所述二级分离装置的过滤孔径为0.7-1.2μm,所述三级分离装置的过滤孔径为0.2μm。其中,0.7μm和1.2μm分别对应水质测试最常用滤膜:GF/F和GF/C玻璃纤维膜的孔径。In a specific embodiment, both the secondary separation device and the tertiary separation device are equipped with an ultrafiltration device in a backwash section, and the filter pore size of the secondary separation device is larger than that of the tertiary separation device. Preferably, the filter pore size of the secondary separation device is 0.7-1.2 μm, and the filter pore size of the tertiary separation device is 0.2 μm. Among them, 0.7 μm and 1.2 μm respectively correspond to the pore diameters of the most commonly used filter membranes for water quality testing: GF/F and GF/C glass fiber membranes.
由于三级分离装置的过滤孔径为0.2μm,该孔径与目前过滤法富集细菌的滤膜孔径相同,所以,综合第一级、第二级富集样本,本系统能够截留水样中浮游动物,浮游植物和浮游细菌,不遗漏遗传信息。为了保证系统运行效率,本系统在二级分离装置和三级分离装置的上游设置了一级分离装置,该分离装置的过滤孔径为20-64μm,截留并收集大于该尺寸的浮游动物和浮游植物,从而保证了下游二级分离装置和三级分离装置的高效运转。Since the filter pore size of the three-stage separation device is 0.2 μm, which is the same as the filter membrane pore size of the current filtration method for enriching bacteria, the system can intercept zooplankton in water samples by integrating the first-stage and second-stage enrichment samples , phytoplankton and phytoplankton bacteria, without missing genetic information. In order to ensure the operating efficiency of the system, the system is equipped with a primary separation device upstream of the secondary separation device and the tertiary separation device. The filter aperture of the separation device is 20-64 μm, which intercepts and collects zooplankton and phytoplankton larger than this size , thus ensuring the efficient operation of the downstream secondary separation device and tertiary separation device.
在一个具体实施方案中,所述浮游生物样品收集装置包括三个浮游生物样品收集瓶,所述三个浮游生物样品收集瓶各自分别与一级分离装置、二级分离装置和三级分离装置连接。In a specific embodiment, the plankton sample collection device includes three plankton sample collection bottles, and each of the three plankton sample collection bottles is respectively connected with the primary separation device, the secondary separation device and the tertiary separation device .
我们将三个分离装置截留的浮游生物分别收集,一级分离装置截留了所有大于20-64μm的浮游生物,其中64μm为水质水生生物监测常用浮游生物网(25号网)的尺寸,正常水体中的绝大部分浮游生物都被包含在该级分中。一级分离装置截留的一些浮游动物可作为水质评价的敏感指标。例如大型溞等,这类浮游动物对水质比较敏感,因此,一级分离装置分离的浮游生物可作为水质的预警指标。此外,第一分离装置的设置不仅对水中的浮游生物提供了分级的作用,还为后面的两级超滤分级截留了绝大部分浮游生物,防止后两级分离装置的超滤膜被堵住,保证了后两级分离装置和整个系统的高效运行。We collected the plankton intercepted by the three separation devices separately. The primary separation device intercepted all the plankton larger than 20-64 μm, of which 64 μm is the size of the plankton net (No. 25 net) commonly used for water quality aquatic life monitoring. Most of the plankton are contained in this fraction. Some zooplankton retained by the primary separation device can be used as sensitive indicators for water quality evaluation. For example, Daphnia magna, this type of zooplankton is more sensitive to water quality, therefore, the plankton separated by the primary separation device can be used as an early warning indicator of water quality. In addition, the setting of the first separation device not only provides a grading effect on the plankton in the water, but also retains most of the plankton for the subsequent two-stage ultrafiltration classification, preventing the ultrafiltration membrane of the latter two-stage separation device from being blocked , to ensure the efficient operation of the last two-stage separation device and the entire system.
被二级分离装置截留的浮游生物大小为大于0.7-1.2μm,小于第一级截留孔径(20-64μm)。其中,0.7μm和1.2μm分别对应水质测试常用滤膜:GF/F和GF/C玻璃纤维膜的孔径。这部分浮游生物主要是(超)微型浮游植物,其中包含了一些个体小、繁殖快、易扩散的浮游植物,许多这样的浮游植物可引起水华暴发,因此,二级分离装置截留下来的浮游生物对于水体未来发生水华的可能性以及水华类型提供重要的参考。The size of the plankton trapped by the secondary separation device is larger than 0.7-1.2 μm and smaller than the first-level retention aperture (20-64 μm). Among them, 0.7 μm and 1.2 μm correspond to the pore diameters of commonly used filter membranes for water quality testing: GF/F and GF/C glass fiber membranes, respectively. This part of phytoplankton is mainly (ultra) microphytoplankton, which contains some phytoplankton that are small, fast-growing, and easy to disperse. Many of these phytoplankton can cause blooms. Therefore, the phytoplankton intercepted by the secondary separation Biology provides an important reference for the possibility of future algal blooms in water bodies and the types of algal blooms.
被三级分离装置截留的浮游生物主要是一些细菌,并可能包括部分超微植物。细菌对水中的有机质含量比较敏感,如果水中有机质含量太高,细菌大量繁殖,有可能引起水质发黑发臭,形成黑臭水。因此,三级分离装置截留的浮游生物可用于辅助评价水中的有机质含量以及作为黑臭水的预警指标。The plankton retained by the tertiary separation device is mainly some bacteria and may include some nanophytes. Bacteria are more sensitive to the content of organic matter in the water. If the content of organic matter in the water is too high, the bacteria will multiply in large numbers, which may cause the water quality to become black and smelly, forming black and smelly water. Therefore, the plankton intercepted by the three-stage separation device can be used to assist in the evaluation of organic matter content in water and as an early warning indicator of black and odorous water.
通过大体积富集提取游离DNA,规避了捕获鱼类等对生态系统的潜在影响,为大型水生生物多样性诊断提供一种非损伤式监测方法。Extraction of cell-free DNA through large-volume enrichment avoids the potential impact of fish capture on the ecosystem, and provides a non-destructive monitoring method for the diagnosis of large-scale aquatic biodiversity.
通过上述布置,我们能在一次水样处理中获得四个对水环境评价至关重要的生物指标:包括对水质敏感的浮游动物、浮游植物、对有机质敏感的细菌,以及游离DNA(主要成分是大型水生动物DNA)。由于这四个生物指标是分开收集的,所以,不会因为其中某一项丰度过高而导致其他项被稀释,更好地体现了水环境的生态状况,为水环境监测和预警提供了重要参考。Through the above arrangement, we can obtain four biological indicators that are crucial to the evaluation of the water environment in one water sample treatment: including zooplankton sensitive to water quality, phytoplankton, bacteria sensitive to organic matter, and free DNA (the main component is macroaquatic DNA). Since these four biological indicators are collected separately, the other items will not be diluted due to the high abundance of one of them, which better reflects the ecological status of the water environment and provides a basis for water environment monitoring and early warning. Important reference.
在一个具体实施方案中,所述DNA富集装置包括DNA富集管、洗脱液储存容器、DNA样品收集瓶和平衡液储存容器,所述三级分离装置的滤液出口、所述洗脱液储存容器和所述平衡液储存容器均与所述DNA富集管的进水口连接,与所述DNA富集管的出水口与所述DNA样品收集瓶和所述循环水容器连接。In a specific embodiment, the DNA enrichment device includes a DNA enrichment tube, an eluent storage container, a DNA sample collection bottle and a balance liquid storage container, the filtrate outlet of the three-stage separation device, the eluent Both the storage container and the balance liquid storage container are connected to the water inlet of the DNA enrichment tube, and the water outlet of the DNA enrichment tube is connected to the DNA sample collection bottle and the circulating water container.
在一个具体实施方案中,所述DNA富集装置中包括多根DNA富集管。In a specific embodiment, the DNA enrichment device includes multiple DNA enrichment tubes.
在一个具体实施方案中,所述水样吸头的进水口设置有孔径3mm的筛网。浮游动物四大类里面,桡足类最大,一般可达3mm,使用3mm孔径一方面不影响较大浮游生物的富集,另一方面可防止大块物体进入系统中,影响系统的运行。In a specific embodiment, the water inlet of the water sample tip is provided with a screen with a pore size of 3mm. Among the four major types of zooplankton, copepods are the largest, generally up to 3mm. Using a 3mm aperture will not affect the enrichment of larger plankton on the one hand, and on the other hand, it can prevent large objects from entering the system and affect the operation of the system.
在一个具体实施方案中,所述水样吸头上设置有用于检测细胞密度的探测器,所述探测器与所述中央控制器通信连接。当探测到水中细胞密度过高时,停止水样吸取和处理,保护系统不受损坏。In a specific embodiment, the water sample tip is provided with a detector for detecting cell density, and the detector is communicatively connected with the central controller. When the cell density in the water is detected to be too high, the water sample suction and processing are stopped to protect the system from damage.
附图说明Description of drawings
图1实施例1的系统的结构示意图。The structural schematic diagram of the system of Fig. 1 embodiment 1.
图2为实施例1的系统的一级分离装置的结构示意图。FIG. 2 is a schematic structural view of the primary separation device of the system of Example 1. FIG.
图3为本发明系统的一个实施方案中的DNA富集装置的结构示意图。Fig. 3 is a schematic structural diagram of a DNA enrichment device in one embodiment of the system of the present invention.
图4为实施例2的系统的结构示意图。FIG. 4 is a schematic structural diagram of the system of Embodiment 2.
图5为实施例2中DNA富集装置的结构示意图。5 is a schematic structural diagram of the DNA enrichment device in Example 2.
图6为具有防堵结构的水样吸头的结构示意图,此时水样吸头处于正常吸取水样工作状态。Fig. 6 is a schematic structural diagram of a water sample tip with an anti-blocking structure, and the water sample tip is in a normal working state of absorbing water samples.
图7为具有防堵结构的水样吸头的结构示意图,此时水样吸头处于滤网被堵住,超声发生器工作状态。Fig. 7 is a structural schematic diagram of a water sample tip with an anti-blocking structure. At this time, the water sample tip is in the state where the filter screen is blocked and the ultrasonic generator is working.
图中的数字编号对应的部件名称如下:1、一级分离装置,11、壳体,11、滤液出口,12、过滤组件,121、过滤区,122、电机,1211、进水口,1212、富集区,1213、浮游生物浓缩液出口,2、二级分离装置,21、二级超滤液出口,22、二级反冲洗液出口,3、三级分离装置,31、三级超滤液出口,32、三级反冲洗液出口,4、DNA富集装置,41、DNA富集管,411、DNA富集填料,42、洗脱液储存容器,43、DNA样品收集瓶,44、平衡液储存容器,5、循环水容器,6、浮游生物样品收集装置,61、第一浮游生物收集瓶,62、第二浮游生物收集瓶,63、第三浮游生物收集瓶,7、水样吸头,70、吸头主体,71、细胞密度监测装置,72、10mm孔径滤网,73、3mm孔径滤网,74、弹簧伸缩柱,75、挡板,76、超声波发生器,761、超声波发生器控制开关。The names of the components corresponding to the numbers in the figure are as follows: 1. Primary separation device, 11. Shell, 11. Filtrate outlet, 12. Filter assembly, 121. Filter area, 122. Motor, 1211. Water inlet, 1212. Rich Concentration area, 1213, plankton concentrate outlet, 2, secondary separation device, 21, secondary ultrafiltrate outlet, 22, secondary backwash liquid outlet, 3, tertiary separation device, 31, tertiary ultrafiltrate Outlet, 32, three-stage backwash liquid outlet, 4, DNA enrichment device, 41, DNA enrichment tube, 411, DNA enrichment filler, 42, eluent storage container, 43, DNA sample collection bottle, 44, balance Liquid storage container, 5, circulating water container, 6, plankton sample collecting device, 61, the first plankton collecting bottle, 62, the second plankton collecting bottle, 63, the third plankton collecting bottle, 7, water sample suction Head, 70, suction head main body, 71, cell density monitoring device, 72, 10mm aperture filter screen, 73, 3mm aperture filter screen, 74, spring telescopic column, 75, baffle plate, 76, ultrasonic generator, 761, ultrasonic generation controller control switch.
具体实施方式Detailed ways
以下结合附图对本发明的原理和特征进行描述,所举实例只用于解释本发明,并非用于限定本发明的范围。The principles and features of the present invention are described below in conjunction with the accompanying drawings, and the examples given are only used to explain the present invention, and are not intended to limit the scope of the present invention.
实施例1Example 1
如图1所示,本实施例的系统包括水样吸头7、一级分离装置1、二级分离装置2、三级分离装置3、DNA富集装置4、循环水容器5和浮游生物样品收集装置6,以及中央控制器。As shown in Figure 1, the system of this embodiment includes a
水样吸头7的出水口与一级分离装置1的一个进水口连接,一级分离装置1的滤液出口与二级分离装置2的进水口连接,二级分离装置3的滤液出口与三级分离装置3的进水口连接,三级分离装置3的滤液出口与DNA富集装置4进水口连接,DNA富集装置4的一个出水口与循环水容器5的进水口连接,循环水容器5的一个出水口与一级分离装置1的一个进水口连接。The water outlet of the
水样吸头7的进水口设置有孔径为3mm以上不锈钢网筛,浮游动物四大类里面,桡足类最大,一般可达3mm,使用3mm孔径一方面不影响较大浮游生物的富集,另一方面可防止大块物体进入系统中,影响系统的运行。The water inlet of the water
如图2所示,一级分离装置1包括壳体11和过滤组件12。壳体11由水密性材料制成,将过滤组件12包括在内部空间。过滤组件12包括圆柱形的过滤区121和电机122,电机122设置在壳体11顶部的内壁上,并与过滤区121顶部的外壁连接,电机122转动可带动过滤区121旋转。过滤区121的侧壁设置孔径为20-64μm的筛网结构,过滤区121底部设置有下凹的富集区1212,富集区1212具有5-50mL的容积。过滤区121顶部中央设置有进水口1211,穿过壳体11,通过管道分别与水样吸头7和循环水容器5连接。富集区1212底部设置有浮游生物浓缩液出口1213,浮游生物浓缩液出口1213穿过壳体11并通过管道与浮游生物样品收集装置6连接。壳体11底部还设置有滤液出口111,滤液出口111通过管道与二级分离装置2的进水口连接。As shown in FIG. 2 , the primary separation device 1 includes a
二级分离装置2和三级分离装置3均为带反冲洗部的超滤装置,不同之处在于,二级分离装置2的滤膜孔径设置为0.7-1.2μm,三级分离装置3的滤膜孔径设置为0.2μm。Both the secondary separation device 2 and the
二级分离装置2设置有二级超滤液出口21和二级反冲洗液出口22,二级超滤液出口21通过管道与三级分离装置的进水口连接,二级反冲洗液出口22通过管道与浮游生物样品收集装置6连接。The secondary separation device 2 is provided with a
三级分离装置3设置有三级超滤液出口31和三级反冲洗液出口32,三级超滤液出口31通过管道与DNA富集装置4的进水口连接,三级反冲洗液出口32通过管道与浮游生物样品收集装置6连接。The three-
如图3所示,DNA富集装置4包括DNA富集管41、洗脱液储存容器42、DNA样品收集瓶43和平衡液储存容器44。DNA富集管41中装有DNA富集填料411。滤液出水口111与DNA富集管41的一个进水口连接。洗脱液储存容器42和平衡液储存容器44均与DNA富集管41的一个进水口连接,DNA样品收集瓶43与DNA富集管41的一个出水口连接。As shown in FIG. 3 , the
DNA富集管41的一个出水口与循环水容器5连接,通过泵将处理后的水泵入到循环水容器5中暂存。循环水容器5的一个出水口与一级分离装置1的进水口1211连接,可向一级分离装置1供水。A water outlet of the
以上所有的进水口、出水口、废液出口等在必要处均设置阀来控制开闭,所有阀和泵都与中央控制器电连接,通过中央控制器控制阀和泵的工作状态。All the above water inlets, water outlets, waste liquid outlets, etc. are equipped with valves to control the opening and closing where necessary. All valves and pumps are electrically connected to the central controller, and the working status of the valves and pumps is controlled by the central controller.
使用时,水样吸头7吸取水样,并进给至一级分离装置1的过滤部121中,进给过程中,电机122带动过滤区121转动,形成横流场,提供离心力使过滤区121中的水样通过过滤区121侧壁上的微孔,分离的浮游生物从浮游生物浓缩液出口1213流出,进入到浮游生物收集装置6中,得到的一级滤液从壳体的滤液出口111流出,进入到二级分离装置2中。一级滤液在二级分离装置2中被进一步过滤,分离的浮游生物从二级反冲洗液出口22流出,进入到浮游生物收集装置6中,得到的二级滤液从二级滤液出口21流出,进入到三级分离装置3中。二级滤液在三级分离装置3中被进一步过滤,分离的浮游生物从三级反冲洗液出口32流出,进入到浮游生物收集装置6中,得到的三级滤液从三级滤液出口31流出,进入到DNA富集装置4中。三级滤液在通过DNA富集装置4后,将水中的DNA吸附在DNA富集填料411上。处理后的水通过DNA富集管41的一个出水口流出,暂存到循环水容器5中。当水样处理完成后,循环水容器5中储存的部分水可以供给至一级分离装置1中,对一级分离装置1进行洗涤,从而使一级分离装置1可循环使用。DNA富集装置4中的平衡液储存容器44向DNA富集管供给平衡液,恢复DNA富集材料411的DNA吸附功能,使DNA富集装置4可循环使用。二级分离装置2和三级分离装置3是带反冲洗部的超滤装置,自带洗涤功能,均可循环使用。因此,本实施例的系统本身为可循环使用的系统,能够在中央控制器的控制下自动工作。When in use, the water
通过本实施例的系统,可在线将大量水样进行浓缩富集成极小体积的浮游生物浓缩液和游离DNA富集溶液,两者可方便地运送至有条件的实验室进行进一步地分析,从而获得完整的环境DNA信息,以及浮游生物分类信息,是优良的水环境监测工具。Through the system of this embodiment, a large number of water samples can be concentrated and enriched into a very small volume of plankton concentrate and free DNA enrichment solution, both of which can be conveniently transported to a qualified laboratory for further analysis, thereby Obtaining complete environmental DNA information and plankton classification information is an excellent water environment monitoring tool.
由于三级分离装置的过滤孔径为0.2μm,所以,综合第一级、第二级和第三级,本系统能够将水样中的浮游动物、浮游植物和浮游细菌截留,并收集起来,以确保获得更为全面的浮游生物,不遗漏遗传信息。为了保证系统运行效率,本系统在二级分离装置和三级分离装置的上游设置了一级分离装置,该分离装置的过滤孔径为20-64μm,截留并收集了大于该尺寸的浮游浮游动物和浮游植物,保证了下游二级分离装置的高效运转。因此,本实施例的系统可布置在预先选好的水域监测点,实现在例如一年甚至更长的时间内定期取水样用于富集环境DNA,富集得到的环境DNA样品体积小方便携带,可容易地转移至实验室进行相关检测和分析。从而实现长期监测目标水域中的生物多样性情况,并作为水环境的因子之一纳入水生态评价体系。Since the filter pore size of the three-stage separation device is 0.2 μm, the system can intercept and collect zooplankton, phytoplankton and phytoplankton bacteria in the water sample by integrating the first, second and third stages. Ensure a more comprehensive plankton view without missing genetic information. In order to ensure the operating efficiency of the system, the system is equipped with a primary separation device upstream of the secondary separation device and the tertiary separation device. The filter aperture of the separation device is 20-64 μm, and the planktonic zooplankton and zooplankton larger than this size are intercepted and collected. Phytoplankton ensure the efficient operation of the downstream secondary separation device. Therefore, the system of this embodiment can be arranged at pre-selected water area monitoring points, so that water samples can be taken regularly for enrichment of environmental DNA, for example, within a year or even longer, and the environmental DNA samples obtained by enrichment are small and convenient. Portable, it can be easily transferred to the laboratory for relevant detection and analysis. In this way, the long-term monitoring of the biodiversity in the target waters can be realized, and it can be included in the water ecological evaluation system as one of the factors of the water environment.
实施例2Example 2
为了使本发明的系统更有效地工作,我们在实施例1的基础上进行了改进。In order to make the system of the present invention work more effectively, we made improvements on the basis of Embodiment 1.
如图4所示,浮游生物样品收集装置6包括第一浮游生物收集瓶61、第二浮游生物收集瓶62和第三浮游生物收集瓶63。第一浮游生物收集瓶61与一级分离装置1的浮游生物浓缩液出口1213连接,第二浮游生物收集瓶62与二级反冲洗液出口22连接,第三浮游生物收集瓶63与三级反冲洗液出口32连接。并且,每个浮游生物收集瓶中均预装有固定液,以保持进入收集瓶中的浮游生物的形态,并防止其腐坏。As shown in FIG. 4 , the plankton
通过以上设置,我们将三个分离装置截留的浮游生物样品分开储存,并且,由于对过滤孔径的设置,所分成的三份样品各带有自己的指标意义。Through the above settings, we store the plankton samples intercepted by the three separation devices separately, and, due to the setting of the filter aperture, each of the three divided samples has its own index meaning.
首先,一级分离装置1截留了所有大于20-64μm的浮游生物,其中64μm为水质水生生物监测常用浮游生物网(25号网)的尺寸,正常水体中的绝大部分浮游动物和浮游植物都被包含在该级分中。并且,这个尺度的浮游生物也比较便于用光学显微镜观察。一级分离装置截留的一些浮游动物可作为水质评价的敏感指标。例如大型溞等,这类浮游动物对水质比较敏感,因此,一级分离装置分离的浮游生物可作为水质的预警指标。此外,第一分离装置的设置不仅对水中的浮游生物提供了分级的作用,还为后面的两级超滤分级截留了绝大部分浮游生物,防止后两级分离装置的超滤膜被堵住,保证了后两级分离装置和整个系统的高效运行。First, the primary separation device 1 intercepts all plankton larger than 20-64 μm, wherein 64 μm is the size of a commonly used plankton net (No. 25 net) for water quality aquatic life monitoring, and most zooplankton and phytoplankton in normal water included in this fraction. Moreover, plankton of this scale are also relatively easy to observe with an optical microscope. Some zooplankton retained by the primary separation device can be used as sensitive indicators for water quality evaluation. For example, Daphnia magna, this type of zooplankton is more sensitive to water quality, therefore, the plankton separated by the primary separation device can be used as an early warning indicator of water quality. In addition, the setting of the first separation device not only provides a grading effect on the plankton in the water, but also retains most of the plankton for the subsequent two-stage ultrafiltration classification, preventing the ultrafiltration membrane of the latter two-stage separation device from being blocked , to ensure the efficient operation of the last two-stage separation device and the entire system.
被二级分离装置2截留的浮游生物大小为大于0.7-1.2μm,小于第一级截留孔径(20-64μm)。其中,0.7μm和1.2μm分别对应水质测试最常用滤膜:GF/F和GF/C玻璃纤维膜的孔径。这部分浮游生物主要是(超)微型浮游植物,其中包含了一些个体小、繁殖快、易扩散的浮游植物,许多这样的浮游植物可引起水华暴发,因此,二级分离装置2截留下来的浮游生物对于水体未来发生水华的可能性以及水华类型提供重要的参考。The size of the plankton retained by the secondary separation device 2 is greater than 0.7-1.2 μm and smaller than the first-stage interception aperture (20-64 μm). Among them, 0.7 μm and 1.2 μm respectively correspond to the pore diameters of the most commonly used filter membranes for water quality testing: GF/F and GF/C glass fiber membranes. This part of phytoplankton is mainly (ultra)microphytoplankton, which includes some phytoplankton that are small in size, fast in reproduction, and easy to disperse. Many of these phytoplankton can cause blooms. Therefore, the intercepted by the secondary separation device 2 Plankton provides important references for the possibility of future algal blooms in water bodies and the types of algal blooms.
被三级分离装置3截留的浮游生物主要是一些细菌和部分超微浮游植物。细菌对水中的有机质含量比较敏感,如果水中有机质含量太高,细菌大量繁殖,有可能引起水质发黑发臭,形成黑臭水。因此,三级分离装置3截留的浮游生物级分可用于辅助评价水中的有机质含量以及作为黑臭水的预警指标。The plankton intercepted by the
在一个具体实施方案中,在水样吸头6上设置了浮游植物浓度监测装置61,以监测水样吸头6所处位置的浮游植物浓度。浮游植物浓度监测装置61与中央控制器通信连接,向中央控制器发送浮游植物浓度数据。In a specific embodiment, a phytoplankton
在实践过程中,我们发现有些水体中,浮游生物浓度变化比较大,当发生水华时,一些优势浮游植物大量繁殖,导致水中含有大量浮游生物。如果使用实施例1的装置,大量的优势浮游植物的DNA进入到收集的总DNA中,导致水中还有的其他环境DNA被大幅稀释,不利于对水体中的总体生物多样性的统计。In the process of practice, we found that in some water bodies, the concentration of plankton varies greatly. When an algal bloom occurs, some dominant phytoplankton multiply in large numbers, resulting in a large amount of plankton in the water. If the device of Example 1 is used, a large amount of DNA of dominant phytoplankton enters into the total DNA collected, resulting in a large dilution of other environmental DNA in the water, which is not conducive to the statistics of the overall biodiversity in the water body.
使用时,细胞密度监测装置71在水样吸头7开始吸取水样之前,检测水样吸头7处的细胞密度,并将细胞密度数据发送给中央控制器,中央控制器根据细胞密度来控制系统的运行模式。当细胞密度较低时,系统定期从水中吸取水样进行浮游生物和游离DNA的富集。When in use, the cell
当水域暴发水华或黑臭水时,浮游植物细胞或细菌细胞浓度突破阈值,中央控制器及时停止水样吸取,防止系统受到破坏。When algal blooms or black odorous water break out in the water area, the concentration of phytoplankton cells or bacterial cells exceeds the threshold, and the central controller stops water sampling in time to prevent the system from being damaged.
在本实施例中,还进一步优化了DNA富集装置,如图5所示,设置有多个DNA富集管41,以提高DNA富集效率。In this embodiment, the DNA enrichment device is further optimized. As shown in FIG. 5 , multiple
实施例3Example 3
水样吸头7采用3mm滤网滤除大块物体,但是,3mm孔径较小,容易发生堵塞。因此,本实施例为了解决该问题,对水样吸头7进行了改进设计。如图6和7所示,本实施例的水样吸头7包括吸头主体70,为底部开口的容器,底部开口由10mm孔径滤网72封堵,吸头主体70顶部与水管连接,使得吸头主体70内部可与系统的管泵系统连通。吸头主体70靠近顶部的位置固定有3mm滤网73,3mm滤网73底部固定弹簧伸缩杆74,弹簧伸缩杆74的另一端与挡板75固定连接,挡板75的形状与吸头主体70的底部开口配合,可恰好堵住吸头主体70底部开口。吸头主体70的内壁上设置有超声波发生器76,并且超声波发生器76设置在3mm孔径滤网的下方。超声波发生器开关761设置在吸头主体70底部开口处,位于10mm孔径滤网72的上方。The water
弹簧伸缩杆74设置成自然状态时挡板75堵住,并且在泵工作使水样吸头7开始吸取水样时,吸头主体70形成的负压使弹簧收缩杆74收缩,挡板75抬起,水样从吸头主体70底部开口进入,并且较大的漂浮物被10mm孔径滤网72挡住,在吸头主体70中再经过3mm孔径滤网73过滤,进入到系统中。当3mm孔径滤网73被堵住时,吸头主体70中的负压逐渐下降,导致弹簧伸缩杆74在弹簧的推力下伸长,挡板75下降封住吸头主体70底部开口,并触动超声波发生器开关761,使超声波发生器76处于工作状态,超声波发生器在吸头主体70内部水中产生超声波,使3mm孔径滤网73上堵住的异物被脱离,3mm孔径滤网73被疏通,继续进行水样吸取。When the spring
以上所述仅为本发明的较佳实施例,并不用以限制本发明,凡在本发明的精神和原则之内,所作的任何修改、等同替换、改进等,均应包含在本发明的保护范围之内。The above descriptions are only preferred embodiments of the present invention, and are not intended to limit the present invention. Any modifications, equivalent replacements, improvements, etc. made within the spirit and principles of the present invention shall be included in the protection of the present invention. within range.
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CN116296526A (en) * | 2023-05-18 | 2023-06-23 | 交通运输部天津水运工程科学研究所 | Plankton stable isotope sample collection device |
CN119125557A (en) * | 2024-11-13 | 2024-12-13 | 生态环境部南京环境科学研究所 | Method and device for evaluating pathogen risk of flowing water area based on machine learning |
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CN116296526A (en) * | 2023-05-18 | 2023-06-23 | 交通运输部天津水运工程科学研究所 | Plankton stable isotope sample collection device |
CN116296526B (en) * | 2023-05-18 | 2023-08-22 | 交通运输部天津水运工程科学研究所 | Plankton stable isotope sample collection device |
CN119125557A (en) * | 2024-11-13 | 2024-12-13 | 生态环境部南京环境科学研究所 | Method and device for evaluating pathogen risk of flowing water area based on machine learning |
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