CN113474840B - 用于预测hla ii类特异性表位及表征cd4+ t细胞的方法和系统 - Google Patents
用于预测hla ii类特异性表位及表征cd4+ t细胞的方法和系统 Download PDFInfo
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- CN113474840B CN113474840B CN201980092864.1A CN201980092864A CN113474840B CN 113474840 B CN113474840 B CN 113474840B CN 201980092864 A CN201980092864 A CN 201980092864A CN 113474840 B CN113474840 B CN 113474840B
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
- A61K—PREPARATIONS FOR MEDICAL, DENTAL OR TOILETRY PURPOSES
- A61K38/00—Medicinal preparations containing peptides
- A61K38/16—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof
- A61K38/17—Peptides having more than 20 amino acids; Gastrins; Somatostatins; Melanotropins; Derivatives thereof from animals; from humans
- A61K38/177—Receptors; Cell surface antigens; Cell surface determinants
- A61K38/1774—Immunoglobulin superfamily (e.g. CD2, CD4, CD8, ICAM molecules, B7 molecules, Fc-receptors, MHC-molecules)
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- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
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- A61K39/00—Medicinal preparations containing antigens or antibodies
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- A—HUMAN NECESSITIES
- A61—MEDICAL OR VETERINARY SCIENCE; HYGIENE
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- A61K48/00—Medicinal preparations containing genetic material which is inserted into cells of the living body to treat genetic diseases; Gene therapy
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- C07K14/705—Receptors; Cell surface antigens; Cell surface determinants
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- C07K16/18—Immunoglobulins [IG], e.g. monoclonal or polyclonal antibodies against material from animals or humans
- C07K16/28—Immunoglobulins [IG], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants
- C07K16/2803—Immunoglobulins [IG], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants against the immunoglobulin superfamily
- C07K16/2833—Immunoglobulins [IG], e.g. monoclonal or polyclonal antibodies against material from animals or humans against receptors, cell surface antigens or cell surface determinants against the immunoglobulin superfamily against MHC-molecules, e.g. HLA-molecules
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- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
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- G16B20/00—ICT specially adapted for functional genomics or proteomics, e.g. genotype-phenotype associations
- G16B20/30—Detection of binding sites or motifs
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- G—PHYSICS
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- G16B25/00—ICT specially adapted for hybridisation; ICT specially adapted for gene or protein expression
- G16B25/10—Gene or protein expression profiling; Expression-ratio estimation or normalisation
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- G—PHYSICS
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- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B30/00—ICT specially adapted for sequence analysis involving nucleotides or amino acids
- G16B30/10—Sequence alignment; Homology search
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- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
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- G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
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- G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
- G16B40/10—Signal processing, e.g. from mass spectrometry [MS] or from PCR
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- G—PHYSICS
- G16—INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR SPECIFIC APPLICATION FIELDS
- G16B—BIOINFORMATICS, i.e. INFORMATION AND COMMUNICATION TECHNOLOGY [ICT] SPECIALLY ADAPTED FOR GENETIC OR PROTEIN-RELATED DATA PROCESSING IN COMPUTATIONAL MOLECULAR BIOLOGY
- G16B40/00—ICT specially adapted for biostatistics; ICT specially adapted for bioinformatics-related machine learning or data mining, e.g. knowledge discovery or pattern finding
- G16B40/20—Supervised data analysis
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- G—PHYSICS
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- G16B5/00—ICT specially adapted for modelling or simulations in systems biology, e.g. gene-regulatory networks, protein interaction networks or metabolic networks
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- Bioinformatics & Cheminformatics (AREA)
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- Public Health (AREA)
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- Immunology (AREA)
- Software Systems (AREA)
- Artificial Intelligence (AREA)
- Evolutionary Computation (AREA)
- Organic Chemistry (AREA)
- Proteomics, Peptides & Aminoacids (AREA)
- Databases & Information Systems (AREA)
- Computer Vision & Pattern Recognition (AREA)
- Bioethics (AREA)
- Pharmacology & Pharmacy (AREA)
- Analytical Chemistry (AREA)
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Priority Applications (1)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| CN202411742207.6A CN119864090A (zh) | 2018-12-21 | 2019-12-20 | 用于预测hla ii类特异性表位及表征cd4+t细胞的方法和系统 |
Applications Claiming Priority (9)
| Application Number | Priority Date | Filing Date | Title |
|---|---|---|---|
| US201862783914P | 2018-12-21 | 2018-12-21 | |
| US62/783,914 | 2018-12-21 | ||
| US201962826827P | 2019-03-29 | 2019-03-29 | |
| US62/826,827 | 2019-03-29 | ||
| US201962855379P | 2019-05-31 | 2019-05-31 | |
| US62/855,379 | 2019-05-31 | ||
| US201962891101P | 2019-08-23 | 2019-08-23 | |
| US62/891,101 | 2019-08-23 | ||
| PCT/US2019/068084 WO2020132586A1 (en) | 2018-12-21 | 2019-12-20 | Method and systems for prediction of hla class ii-specific epitopes and characterization of cd4+ t cells |
Related Child Applications (1)
| Application Number | Title | Priority Date | Filing Date |
|---|---|---|---|
| CN202411742207.6A Division CN119864090A (zh) | 2018-12-21 | 2019-12-20 | 用于预测hla ii类特异性表位及表征cd4+t细胞的方法和系统 |
Publications (2)
| Publication Number | Publication Date |
|---|---|
| CN113474840A CN113474840A (zh) | 2021-10-01 |
| CN113474840B true CN113474840B (zh) | 2024-12-17 |
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| CN201980092864.1A Active CN113474840B (zh) | 2018-12-21 | 2019-12-20 | 用于预测hla ii类特异性表位及表征cd4+ t细胞的方法和系统 |
| CN202411742207.6A Pending CN119864090A (zh) | 2018-12-21 | 2019-12-20 | 用于预测hla ii类特异性表位及表征cd4+t细胞的方法和系统 |
Family Applications After (1)
| Application Number | Title | Priority Date | Filing Date |
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| CN202411742207.6A Pending CN119864090A (zh) | 2018-12-21 | 2019-12-20 | 用于预测hla ii类特异性表位及表征cd4+t细胞的方法和系统 |
Country Status (13)
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|---|---|
| US (2) | US11183272B2 (https=) |
| EP (1) | EP3899954A4 (https=) |
| JP (3) | JP7236543B2 (https=) |
| KR (2) | KR20240091046A (https=) |
| CN (2) | CN113474840B (https=) |
| AU (1) | AU2019404547B2 (https=) |
| BR (1) | BR112021012278A2 (https=) |
| CA (1) | CA3124457A1 (https=) |
| IL (1) | IL284195A (https=) |
| MX (1) | MX2021007556A (https=) |
| PH (1) | PH12021551485A1 (https=) |
| SG (1) | SG11202106678PA (https=) |
| WO (1) | WO2020132586A1 (https=) |
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| US11299783B2 (en) | 2016-05-27 | 2022-04-12 | Personalis, Inc. | Methods and systems for genetic analysis |
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| JP7470787B2 (ja) | 2019-11-05 | 2024-04-18 | パーソナリス,インコーポレイティド | 単一試料からの腫瘍純度の推定 |
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