CN113265344B - Genetic engineering bacterium for selectively producing retinol and construction method and application thereof - Google Patents

Genetic engineering bacterium for selectively producing retinol and construction method and application thereof Download PDF

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CN113265344B
CN113265344B CN202110545875.XA CN202110545875A CN113265344B CN 113265344 B CN113265344 B CN 113265344B CN 202110545875 A CN202110545875 A CN 202110545875A CN 113265344 B CN113265344 B CN 113265344B
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retinol
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carotene
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叶丽丹
于洪巍
胡琼越
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Zhejiang University ZJU
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Abstract

The invention discloses a genetic engineering bacterium for selectively producing retinol and a construction method and application thereof, belonging to the field of genetic engineering. The genetic engineering bacteria take an engineering strain for producing the beta-carotene as a starting strain, and introduce a beta-carotene 15, 15' -dioxygenase coding gene and an aldehyde reductase coding gene or/and a retinol dehydrogenase coding gene to realize the selective production of the retinol by a cell factory. In order to further improve the output of retinol, the genetic engineering bacteria also introduce a geranylgeranyl pyrophosphate synthase mutant coding gene and a coding gene of NADH kinase for cutting off mitochondrial positioning peptide at the N end, and simultaneously knock out a mevalonate pathway transcription inhibitor gene, thereby increasing the supply of precursor and coenzyme. The invention also provides a method for producing retinol by using the genetic engineering bacteria, and ferrous ions and antioxidants are added in the fermentation process, so that the yield of retinol is further improved.

Description

Genetic engineering bacterium for selectively producing retinol and construction method and application thereof
Technical Field
The invention relates to the fields of genetic engineering, metabolic engineering and microorganisms, in particular to a construction method and application of a genetic engineering bacterium capable of realizing selective production of retinol.
Background
Vitamin A (VA) generally refers to a substance with Retinol-like biological activity, generally consisting of 20 carbon structures with 4 consecutive isoprenoid unit side chains and one β -ionone ring, and is classified into Retinol (hydroxyl), retinal (aldehyde), retinoic acid (carboxyl) and retinyl ester (acyl) according to the difference of the 15-carbon-bonded groups. Due to the presence of a special conjugated double bond system, vitamin a is susceptible to degradation by oxidation and isomerization after exposure to light, oxygen and transition metal ions.
Vitamin A, as an essential vitamin of human body, plays an important role in maintaining visual function, participating in immune system, regulating cell proliferation and differentiation, stabilizing epithelial cell morphological function and other physiological activities.
Most of the commercial vitamin A on the market is chemically synthesized. At present, the traditional chemical synthesis method of vitamin A mainly comprises two processes of Roche and BASF. A common problem with both VA chemical synthesis routes is that the selectivity to the all-trans form with the highest VA titer is not high. The final product synthesized by the Roche route is all-trans isomer and 13-cis isomer with higher titer, and the cis isomer accounts for 80 percent of the total. The BASF route has about 28% of 11-cis form in the backbone stage of the synthetic molecule, while the all-trans form is only 70%, and the cis-isomer from the C5 aldehyde ester in the subsequent witting reaction will produce 13-cis form, so that finally additional optical isomerisation is necessary to obtain the all-trans form.
The heterologous synthesis production of vitamin A by using microorganisms is an efficient and promising method. At present, the Vitamin A synthesized by Escherichia coli (Selective regeneration by modulating the composition of a Vitamin from microbial Engineered E.coli, Biotechnol Bioeng,2015) and Saccharomyces cerevisiae (Vitamin A Production by Engineered Saccharomyces cerevisiae via Two-Phase in Situ Extraction, ACS Synth Biol,2019) are used as hosts, the proportion of retinol accounts for 88% of the total yield at most, the yield is only 76.56mg/L, and the application value of the Vitamin A in the form of alcohol in the cosmetic field is much higher than that in the form of aldehyde.
Therefore, how to efficiently prepare vitamin A in an alcohol form by using microbial heterologous synthesis is a problem to be solved by those skilled in the art.
Disclosure of Invention
The invention aims to provide a genetic engineering bacterium capable of selectively producing retinol, and the vitamin A in an alcohol form is efficiently prepared by a microbial heterologous synthesis mode.
In order to achieve the purpose, the invention adopts the following technical scheme:
the invention provides a genetic engineering bacterium for selectively producing Retinol, which takes an engineering strain for producing beta-carotene as a starting bacterium, and integrates a beta-carotene 15, 15 '-dioxygenase encoding gene (beta-carotene 15, 15' -dioxygenase, BLH) and an Aldehyde reductase (Aldehyde reductase) encoding gene or/and a Retinol dehydrogenase (Retinol dehydrogenase) encoding gene on a chromosome;
or the genetic engineering bacteria take an engineering strain for producing the beta-carotene as a starting bacteria, and the host bacteria contain recombinant expression plasmids containing beta-carotene 15, 15' -dioxygenase coding genes and aldehyde reductase coding genes or/and retinol dehydrogenase coding genes.
The engineering strain for producing the beta-carotene by the spawn is a strain with the function of producing the beta-carotene, wherein the condensation of geranylgeranyl pyrophosphoric acid, the desaturation and isomerization of phytoene and the lycopene cyclization are necessary ways for producing the retinol. On the basis, the invention utilizes a gene integration technology or a mode of introducing recombinant expression plasmids to ensure that beta-carotene 15, 15 ' -dioxygenase (BLH) and aldehyde reductase (YBBO), or beta-carotene 15, 15 ' -dioxygenase (BLH) and retinol dehydrogenase (ENV9), or beta-carotene 15, 15 ' -dioxygenase (BLH), aldehyde reductase (YBBO) and retinol dehydrogenase (ENV9) are successfully expressed in an engineering strain for producing beta-carotene and participate in the synthesis of retinol, thereby realizing the selective production of retinol by taking safe and efficient engineering bacteria as cell factories.
Preferably, the starting strain is an engineered strain Ycarot-02 producing beta-carotene, a publicly available material, and its construction method is described in the literature (Allation of metabolic bottenk by combinatorial engineering in Saccharomyces cerevisiae, Enzyme Microb Technol, 2017).
The invention obtains the coding gene segment of the enzyme which can be successfully expressed in the saccharomyces cerevisiae through gene cloning and codon optimization.
Furthermore, the nucleotide sequence of the beta-carotene 15, 15' -dioxygenase coding gene is shown as SEQ ID NO. 1. The present invention is codon optimized and synthesizes corresponding sequences according to the preference of the host cell. The nucleotide sequence of the aldehyde reductase coding gene is shown in SEQ ID NO.2, and the gene is derived from escherichia coli. The nucleotide sequence of the retinol dehydrogenase coding gene is shown in SEQ ID NO.3, and the gene is cloned from a saccharomyces cerevisiae genome for producing beta-carotene.
Furthermore, the genetically engineered bacterium also introduces a coding gene of geranylgeranyl pyrophosphate synthase mutant (CrtE03M) and a coding gene of NADH kinase (tPOS5) for cutting off N-terminal mitochondrial positioning peptide, and simultaneously, the mevalonate pathway transcription inhibitor (MOT3) gene is knocked out.
In order to further improve the yield of the retinol, the invention introduces geranylgeranyl pyrophosphate synthase mutant coding gene and truncated NADH kinase coding gene into saccharomyces cerevisiae, knocks out mevalonate pathway transcription inhibitor gene, and knocks out mevalonate pathway transcription inhibitor and over-expresses truncated NADH kinase to respectively increase the precursor and coenzyme (NADPH) required by retinol synthesis by over-expressing geranylgeranyl pyrophosphate synthase mutant, knocking out mevalonate pathway transcription inhibitor and over-expressing truncated NADH kinase, wherein the truncated NADH kinase is used for cutting off mitochondrion localization peptide at the N terminal thereof on the basis of NADH kinase so as to ensure that the truncated NADH kinase can play a role in cytoplasm.
Further, the nucleotide sequence of the geranylgeranyl pyrophosphate synthase mutant coding gene is shown as SEQ ID NO. 4; the nucleotide sequence of the encoding gene of the NADH kinase for cutting off the mitochondrial localization peptide at the N end is shown as SEQ ID NO. 5;
the CrtE03M gene and the POS5 gene are cloned from a saccharomyces cerevisiae genome for producing beta-carotene, primers are redesigned on the basis of the POS5 gene, and N-end mitochondrial localization peptide is deleted to obtain the coding gene of tPOS 5.
The nucleotide sequence of the mevalonate pathway transcription repressing factor gene is shown in SEQ ID NO. 8.
The invention also provides a method for constructing the genetic engineering bacteria for selectively producing the retinol, and the construction method comprises the following steps: taking an engineering strain for producing beta-carotene as a starting strain, and respectively integrating a beta-carotene 15, 15' -dioxygenase coding gene, an aldehyde reductase coding gene or/and a retinol dehydrogenase coding gene onto a chromosome of the engineering strain for producing the beta-carotene through integrating plasmids to obtain the genetic engineering strain for selectively producing the retinol;
or by taking an engineering strain for producing the beta-carotene as a host bacterium, and introducing a recombinant expression plasmid containing a beta-carotene 15, 15' -dioxygenase coding gene and an aldehyde reductase coding gene or/and a retinol dehydrogenase coding gene.
The invention introduces the coding genes of beta-carotene 15, 15' -dioxygenase (BLH) and endogenous retinol dehydrogenase (ENV9) or/and exogenous aldehyde reductase (YBBO) into the cells of an engineering strain for producing beta-carotene, so that the corresponding enzymes are successfully expressed in the engineering strain for producing beta-carotene, and the genetic engineering bacteria for selectively producing retinol are constructed.
Further, a geranylgeranyl pyrophosphate synthase mutant coding gene and a truncated NADH kinase coding gene are introduced into the engineering bacteria by using a gene integration or introduction recombinant expression plasmid mode; and knocking out mevalonate pathway transcription inhibitor genes by using a homologous recombination technology.
Specifically, the invention provides a construction method of a recombinant bacterium which integrates BLH, YBBO, ENV9, CrtE03M and tPOS5 and knocks out MOT3, wherein the construction method comprises the following steps:
(1) cloning a gene coding beta-carotene 15, 15' -dioxygenase with a nucleotide sequence shown as SEQ ID NO.1 to P of pUMRI-LPP1 GAL1 Then, obtaining a recombinant plasmid pUMRI-LPP1-BLH from the multiple cloning site;
(2) cloning a geranylgeranyl pyrophosphate synthase mutant coding gene with a nucleotide sequence shown as SEQ ID NO.4 and an aldehyde reductase coding gene with a nucleotide sequence shown as SEQ ID NO.2 to P of pUMRI-DPP1 respectively GAL2 And P GAL7 Obtaining a recombinant plasmid pUMRI-DPP1-CrtE03M-YBBO from the later multiple cloning sites;
(3) cloning the upstream and downstream homologous arms of mevalonate pathway transcription inhibitor gene into pUMRI21 plasmid to construct pUMRI-MOT3, and cutting the encoding gene and nucleotides of NADH kinase of N-terminal mitochondrial localization peptide shown in SEQ ID NO.5The retinol dehydrogenase encoding genes with the sequence shown in SEQ ID NO.3 are respectively cloned to P of pUMRI-MOT3 GAL10 And P GAL1 Obtaining a recombinant plasmid pUMRI-MOT3-tPOS5-ENV9 from the later multiple cloning sites;
(4) the recombinant plasmids pUMRI-LPP1-BLH, pUMRI-DPP1-CrtE03M-YBBO and pUMRI-MOT3-tPOS5-ENV9 are sequentially transformed into an engineering strain Ycarot-02 for producing beta-carotene, and a recombinant bacterium which integrates a beta-carotene 15, 15' -dioxygenase coding gene, an aldehyde reductase coding gene, a retinol dehydrogenase coding gene, a geranylgeranyl pyrophosphate synthase mutant coding gene and a coding gene of NADH kinase for cutting off N-terminal mitochondrial positioning peptide in a chromosome and is knocked out a mevalonate pathway transcription inhibitor gene is the genetic engineering bacterium for selectively producing the retinol.
The plasmids pUMRI-LPP1, pUMRI-DPP1 and pUMRI21 are all publicly available materials. With P GAL1 、P GAL10 、P GAL2 、P GAL7 For the promoter, the gene fragment is gradually integrated on the host bacterium chromosome through a pUMRI series assembly tool plasmid.
The invention also provides application of the genetic engineering bacteria for selectively producing the retinol in preparation of the retinol. Retinol is prepared from the fermentation culture of the genetically engineered strain constructed in the present invention.
The invention also provides a preparation method of the retinol, which comprises the following steps:
1) after the genetic engineering bacteria for selectively producing the retinol are subjected to expanded culture, the genetic engineering bacteria are inoculated into a fermentation medium containing ferrous ions, an extracting agent and an antioxidant are added, and shaking culture is performed to obtain fermentation liquor;
2) collecting the organic phase in the fermentation liquid, and separating to obtain the retinol.
In the step 1), the activated genetically engineered bacteria are subjected to amplification culture, the strains are inoculated in a fermentation culture medium, an extracting agent is added, two-phase fermentation culture is carried out, and the product retinol is dissolved in an organic phase extracting agent.
Ferrous ions are added into a fermentation medium to improve the activity of the beta-carotene 15, 15' -dioxygenase, which is beneficial to the growth of bacterial strains and the synthesis of retinol. Preferably, the concentration of ferrous ions in the YPD liquid medium is 1.26-1.80 mM. More preferably, the concentration of ferrous ions in the YPD liquid medium is 1.44 mM.
Preferably, the extractant is dodecane, and 2.5-10.0 mL of the extractant is added in every 50mL of culture solution; the antioxidant is dibutylhydroxytoluene (BHT), and 0.25-1.0 g of the antioxidant is added to 50mL of the culture solution.
The invention solves the problems of easy oxidation and easy isomerization of the retinol by adding BHT as an antioxidant in the culture process, and realizes the high yield of the retinol.
Preferably, the conditions for the two-phase fermentation are: culturing for 72-84 hours in a constant temperature shaking table at the speed of 200-250 rpm and the temperature of 28-30 ℃ in a dark place.
In step 2), high-yield and high-purity retinol is directly obtained from the upper organic phase through two-phase fermentation culture.
The invention has the following beneficial effects:
(1) the invention constructs a genetic engineering bacterium capable of realizing selective synthesis of retinol, takes an engineering strain for producing beta-carotene as a starting bacterium, introduces a beta-carotene 15, 15' -dioxygenase coding gene and an aldehyde reductase coding gene or a retinol dehydrogenase coding gene into the engineering bacterium for producing beta-carotene, and successfully expresses corresponding enzymes in the strain to participate in the synthesis of retinol.
In order to further improve the yield of the retinol, a coding gene of a geranylgeranyl pyrophosphate synthase mutant and a coding gene of NADH kinase for cutting off mitochondrial positioning peptide at the N end are introduced into an engineering strain for producing the beta-carotene, a mevalonate pathway transcription inhibitor gene is knocked out, and the yield of the retinol is improved by increasing the supply of precursors and coenzymes.
(2) The invention provides a method for realizing high retinol yield, which improves the activity of beta-carotene 15, 15' -dioxygenase by adding ferrous ions in the two-phase fermentation process taking dodecane as an extracting agent, and inhibits the oxidation of retinol by adding an antioxidant, so that the retinol yield is further improved. The yield of the synthesized retinol after the construction of the engineering strain in the invention is subjected to shake flask two-phase fermentation culture is superior to the report in the prior art, and the invention has good application prospect.
Drawings
FIG. 1 shows the backbone (A) and the construction result (B) required for the construction of pUMRI-MOT3 plasmid.
FIG. 2 shows integration sites involved in the construction of selective high-producing strains of retinol, (A) the construction of s.cerevisiae producing beta-carotene by the starting strain, and (B) the construction of s.cerevisiae Y03-43 producing retinol according to the present invention.
FIG. 3 shows the cofactor Fe required for the reaction of the BLH enzyme 2+ Is optimized.
FIG. 4 is a HPLC detection chart of the selective retinol-producing strain Y03-43, wherein the upper, middle and lower liquid phase peak curves are the experimental group, the retinal standard group and the retinol standard group.
FIG. 5 shows the ratio of retinol to retinal in the synthetic products of the retinol selective highly productive strain Y03-43 and other related strains. Y03 is a strain integrating a gene encoding beta-carotene 15, 15' -dioxygenase (BLH) in a starting strain producing beta-carotene, Y03-33 is a strain integrating only a gene encoding aldehyde reductase (YBBO) in a strain Y03, Y03-34 is a strain overexpressing only retinol dehydrogenase (ENV9) in a strain Y03, Y03-251 is a strain overexpressing truncated NADH kinase (tPOS5) in a strain Y03, Y03-252 is a strain overexpressing truncated NADH kinase (tPOS5) and a geranylgeranyl pyrophosphate synthase mutant (CrtE03M) in a strain Y03, and Y03-42 is a strain overexpressing NADH kinase (tPOS5) and a geranylgeranyl pyrophosphate synthase mutant (CrtE03M) and a geranylgeranyl dehydrogenase (ENV9) in a strain Y03.
FIG. 6 shows the effect of different strains on retinol synthesis after addition of antioxidant BHT.
Detailed Description
The invention will be further described with reference to specific examples, but the scope of the invention is not limited thereto. Unless otherwise specified, the experimental procedures used in the examples are those conventional in the art, and the starting materials and reagents are commercially available.
The engineering strain Ycarot-02 for producing beta-carotene is constructed in the early stage of the subject group, and the construction method is disclosed in the literature reference (allergy of metabolic flask by combinatorial engineering in Saccharomyces cerevisiae, Enzyme Microb Technol, 2017).
Example 1 cloning of genes required for retinol biosynthesis
1. Extraction of Escherichia coli and Saccharomyces cerevisiae genome DNA
1.1 extraction of Escherichia coli BL21 genome DNA is completed by a kit, and the specific steps are as follows:
(1) 1mL of Escherichia coli liquid cultured overnight is taken and added into a 1.5mL centrifuge tube, centrifuged for 1min at 8000rpm at room temperature, the supernatant is discarded, and the thalli are collected. Adding 180 mu L of lysozyme solution to resuspend the bacterial solution, and carrying out water bath at 37 ℃ for 30-60 min. Then 20. mu.L of protease K solution is added, and the mixture is shaken and mixed evenly. The cells were completely lysed by a water bath at 56 ℃ for 30 min.
(2) And in the water bath process, reversing and uniformly mixing the mixture every 10min until the mixture becomes clear and transparent, adding 20 mu L of RNase, standing the mixture at room temperature for 2-5 min, and removing RNA.
(3) Add 200. mu.L of Buffer BD and mix well by inversion.
(4) Add 200. mu.L of absolute ethanol and mix well by inversion.
(5) Putting the adsorption column into a collection tube, sucking all the solution and suspended matters into the adsorption column by using a pipette, standing for 2min, centrifuging at 12000rpm for 1min at room temperature, and pouring out waste liquid in the collection tube.
(6) The adsorption column was returned to the collection tube, 500. mu.L of PW Solution was added, centrifuged at 10000rpm for 30s, and the filtrate was discarded.
(7) The adsorption column was returned to the collection tube, 500. mu.L Wash Solution was added, centrifugation was carried out at 10000rpm for 30s, and the filtrate was discarded.
(8) And (4) idling and leaving residual Wash Solution.
(9) The adsorption column was placed in a new 1.5mL centrifuge tube, 75. mu.L of CE Buffer was added and left to stand for 3min, centrifuged at 12000rpm for 2min at room temperature, and the resulting DNA solution was collected and stored at-20 ℃.
1.2 the extraction of the genome DNA of saccharomyces cerevisiae (engineering strain Ycarot-02 for producing beta-carotene) is completed by a kit, and the method comprises the following steps:
(1) 1-3mL of yeast culture solution cultured for 20-24h was centrifuged at 12000rpm at room temperature for 5 min.
(2) The supernatant was discarded, 480. mu.L of Buffer SE, 10. mu.L of mercaptoethanol, and 20. mu.L of lywallzyme were added, the pellet was resuspended, and incubated at 30 ℃ for 30 min.
(3) Centrifuging at 12000rpm for 5min at room temperature, discarding the supernatant, adding 200 μ L Buffer YL and 50mg glass beads (0.4-0.6mm), vortex shaking for 3-5min, standing, and sucking the supernatant into a new 1.5mL centrifuge tube.
(4) Adding 25 μ L of protease K, mixing well, and incubating with shaking at 65 deg.C for 30 min.
(5) Add 5. mu.L RNase A and repeat the tube upside down and incubate 10min at room temperature.
(6) Add 220. mu.L Buffer YDL and 220. mu.L pure ethanol and vortex for 20 s.
(7) Placing the adsorption column into a collection tube, sucking all the supernatant into the adsorption column by using a pipette, centrifuging at 10000rpm for 1min, and discarding the supernatant.
(8) The adsorption column was returned to the collection tube, 500. mu.L of Buffer HB was added, centrifugation was carried out at 10000rpm for 30s, and the filtrate was discarded.
(9) The adsorption column was returned to the collection tube, 700. mu.L of DNA Wash Buffer was added, centrifuged at 10000rpm for 30s, and the filtrate was discarded.
(10) The above step was repeated, and the remaining DNA Wash Buffer was removed by idling.
(11) The adsorption column was placed in a new 1.5mL centrifuge tube, 75. mu.L of precipitation Buffer was added, and the mixture was allowed to stand at 65 ℃ for 3-5min, centrifuged at 12000rpm for 1min at room temperature, and the resulting DNA solution was collected and stored at-20 ℃.
2. The protein sequence of beta-carotene 15, 15' -dioxygenase (BLH) is found at NCBI, and a corresponding sequence is synthesized by using Saccharomyces cerevisiae as a host through codon optimization by a gene synthesis company, wherein the nucleotide sequence is shown as SEQ ID NO. 1.
3. The aldehyde reductase (YBBO) uses an escherichia coli genome as a template, retinol dehydrogenase (ENV9), NADH kinase (POS5) and geranylgeranyl pyrophosphate synthase mutant (CrtE03M) use a saccharomyces cerevisiae genome as a template, and high fidelity enzyme (Prime STARTM HS DNA polymerase) is adopted for PCR amplification.
Truncated NADH kinase (tPOS5) redesigns primer based on NADH kinase (POS5), and deletes N-terminal mitochondrion localization peptide.
The nucleotide sequence of the aldehyde reductase (YBBO) gene is shown as SEQ ID NO. 2; the nucleotide sequence of the retinol dehydrogenase (ENV9) gene is shown in SEQ ID NO. 3; the nucleotide sequence of the encoding gene of the geranylgeranyl pyrophosphate synthase mutant (CrtE03M) is shown as SEQ ID NO. 4; the nucleotide sequence of the truncated NADH kinase (tPOS5) gene is shown as SEQ ID NO.5, the coded amino acid sequence is shown as SEQ ID NO.6, and the nucleotide sequence of the NADH kinase (POS5) gene is shown as SEQ ID NO. 7.
Primer design is as follows:
TABLE 1 cloning of primers for genes required for retinol biosynthesis
Figure BDA0003073631450000091
The PCR reaction (50. mu.L) was as follows:
Figure BDA0003073631450000092
the PCR procedure was as follows: (1) pre-denaturation at 98 deg.C for 2 min; (2) denaturation at 98 deg.C, 10s, annealing at 55 deg.C, 20s, extension at 72 deg.C, 1kb/min, and 30 cycles; (3) extending at 72 ℃ for 5 min; (4) storing at 4 deg.C for 1 min.
Example 2 construction of pUMRI-MOT3 plasmid
The upstream and downstream homology arms of a transcription inhibitor (MOT3) used for constructing the plasmid pUMRI-MOT3 take a yeast genome as a template, a skeleton part used for the plasmid pUMRI-MOT3 takes a plasmid pUMRI21 as a template, high fidelity enzyme Prime STARTM HS DNA polymerase is adopted for PCR amplification, and the three fragments are connected by a Gibson Assembly kit. The construction is shown in figure 1. The nucleotide sequence of the mevalonate pathway transcription inhibitor gene is shown in SEQ ID NO. 8.
The specific primer design is as follows:
TABLE 2 primers used for construction of pUMRI-MOT3 plasmid
Figure BDA0003073631450000101
Example 3 construction of plasmids required for the retinol biosynthetic pathway
1. Enzyme digestion and gel recovery
The pUMRI series integration plasmids (pUMRI-LPP1 and pUMRI-DPP1 are constructed and preserved in the laboratory, and pUMRI-MOT3 is constructed in example 2) and the target fragment of the PCR product are subjected to double enzyme digestion by Takara restriction enzyme, the double enzyme digestion system is subjected to DNA gel recovery treatment after enzyme digestion according to the instruction of the Takara restriction enzyme, and the specific steps are carried out according to the instruction of an Axygen kit.
2. Enzyme linked to
The digested fragments and plasmids were ligated using T4 DNA ligase in the following ligation scheme (10. mu.l):
Figure BDA0003073631450000102
Figure BDA0003073631450000111
ligation was carried out at 22 ℃ for 30 min.
3. Transformation of
Adding 10 mu L of the ligation product into an escherichia coli competent solution, placing the solution on ice for 15min, then performing heat shock at 42 ℃ for 90s, quickly placing the solution in an ice bath for 3min, adding 1mL of LB liquid culture medium, recovering the solution under a shaking table at 37 ℃ for 45min, then centrifuging the solution, discarding part of supernatant, taking a proper amount of the supernatant, coating the solution on a corresponding resistant LB flat plate, and placing the culture box at 37 ℃ for 15 h.
Specifically, the enzyme digestion ligation is performed in the following manner:
cloning of a fragment of interest of beta-carotene 15, 15' -dioxygenase (BLH) into P of pUMRI-LPP1 GAL1 Then, obtaining a recombinant plasmid pUMRI-LPP1-BLH from the multiple cloning site;
p cloning of aldehyde reductase (YBBO) target fragment to pUMRI-DPP1 GAL7 Obtaining a recombinant plasmid pUMRI-DPP1-YBBO at the later multiple cloning sites;
cloning of a fragment of retinol dehydrogenase (ENV9) of interest into P of pUMRI-DPP1 GAL7 At the latter multiple cloning site, a recombinant plasmid pUMRI-DPP1-ENV9 was obtained.
P cloning of truncated NADH kinase (tPOS5) target fragment into pUMRI-MOT3 GAL10 Obtaining a recombinant plasmid pUMRI-MOT3-tPOS5 from the later multiple cloning sites;
cloning of target fragment of geranylgeranyl pyrophosphate synthase mutant (CrtE03M) into P of pURI-DPP 1 GAL2 Obtaining a recombinant plasmid pUMRI-DPP1-CrtE03M at the later multiple cloning site;
cloning of target fragment of geranylgeranyl pyrophosphate synthase mutant (CrtE03M) into P of pUMRI-DPP1 GAL2 The latter multiple cloning site, the P for cloning of the fragment of interest for aldehyde reductase (YBBO) into pUMRI-DPP1 GAL7 Obtaining a recombinant plasmid pUMRI-DPP1-CrtE03M-YBBO at the later multiple cloning site;
p cloning of truncated NADH kinase (tPOS5) target fragment into pUMRI-MOT3 GAL10 The latter multiple cloning site, the fragment of interest of retinol dehydrogenase (ENV9), was cloned P of pUMRI-MOT3 GAL1 At the latter multiple cloning site, the recombinant plasmid pURI-MOT 3-tPOS5-ENV9 was obtained.
Example 4 construction of Selective high yield Saccharomyces cerevisiae with retinol
The recombinant plasmid pURI-LPP 1-BLH prepared in example 3 was transformed into the β -carotene-producing engineered strain Ycarot-02 so that BLH was integrated into the chromosome of the β -carotene-producing engineered strain to obtain Y03.
Transforming the recombinant plasmid pUMRI-DPP1-YBBO into Y03, so that the YBBO is integrated into Y03 chromosome to obtain Y03-33;
transforming the recombinant plasmid pUMRI-DPP1-ENV9 into Y03, so that ENV9 is integrated into Y03 chromosome, and obtaining Y03-34;
transforming the recombinant plasmid pUMRI-MOT3-tPOS5 into Y03, integrating tPOS5 into a Y03 chromosome, and knocking out MOT3 to obtain Y03-251;
the recombinant plasmid pURI-DPP 1-CrtE03M was transformed into Y03-251, so that CrtE03M was integrated into Y03-251 chromosome, resulting in Y03-252.
The recombinant plasmids pURI-DPP 1-CrtE03M and pURI-MOT 3-tPOS5-ENV9 are sequentially transformed into Y03, so that CrtE03M, tPOS5 and ENV9 are integrated into Y03 chromosome, and simultaneously, the MOT3 is knocked out to obtain Y03-42.
The recombinant plasmids pUMRI-DPP1-CrtE03M-YBBO and pUMRI-MOT3-tPOS5-ENV9 prepared in example 3 were transformed into Y03 in sequence, CrtE03M, YBBO, tPOS5 and ENV9 were integrated into Y03, and at the same time, MOT3 was knocked out to obtain Y03-43, as shown in FIG. 2 (B).
The specific transformation method is as follows:
1. preparing saccharomyces cerevisiae competence: selecting single colony of beta-carotene producing yeast strain from YPD plate, inoculating to 5mL YPD test tube, culturing overnight at 30 deg.C and 220rpm, transferring to 50mL YPD shake flask at 30 deg.C and 220rpm for 4-5 hr with OD 600 Reaching about 2.0.
2. Converting saccharomyces cerevisiae:
(1) the ssDNA was heated in a metal bath at 100 ℃ for 5min and then rapidly cooled in ice for further use.
(2) 45mL of competent yeast liquid was put into a 50mL sterilized centrifuge tube, centrifuged at 4000rpm and 20 ℃ for 5min, and the supernatant was discarded.
(3) Washing with 20mL of sterile water, centrifuging to remove the supernatant, resuspending with 1mL of sterile water, packaging into 1.5mL sterile centrifuge tubes according to 100 μ L per tube, and centrifuging to remove the supernatant.
(4) The following chemotrope systems (360. mu.L) were added to the centrifuge tube in sequence:
Figure BDA0003073631450000121
Figure BDA0003073631450000131
(5) mixing, and standing in metal bath at 42 deg.C for 40 min.
(6) Centrifuging at 12000rpm for 30s, discarding the supernatant, and adding 1mL YPD liquid culture medium to resuscitate for 2 h.
(7) Centrifuging at 12000rpm for 1min, discarding the supernatant, adding 1ml of sterile water for resuspension, and taking 100ul of the suspension to be spread on a corresponding resistant plate.
Example 5 optimization of ferrous ion concentration
A single colony of the engineered bacterium Y03-43 was picked from the streaked plate and inoculated into 5mL of YPD medium, and after the liquid in the test tube became turbid, the strain was cultured in 50mL of YPD liquid medium, and ferrous sulfate ions were added to the medium at final concentrations of 0.00mM, 0.18mM, 0.72mM, 1.08mM, 1.26mM, 1.44mM, and 1.80mM, and the mixture was cultured in a shaking table at 30 ℃ for 84 hours in the dark at 220 rpm.
As shown in FIG. 3, the growth of the engineered bacteria was optimal under 1.44mM condition, and total retinoid synthesis capacity was highest.
Example 6 two-phase fermentation culture of genetically engineered bacteria and extraction and analysis of the products
1. A single colony of the engineering bacteria was picked from the streaked plate and inoculated into 5mL of YPD medium, and after the liquid in the tube became turbid, the strain was cultured in 50mL of YPD liquid medium supplemented with 1.44mM ferrous ion. Two-phase fermentation was carried out with 2.5mL of dodecane supplemented with 1% (w/v) of dibutylhydroxytoluene (BHT) as an extractant, and the mixture was incubated in a constant temperature shaker at 220rpm and 30 ℃ for 84 hours in the absence of light.
2. Collecting yeast fermentation liquid into a centrifuge tube, centrifuging at 4000rpm for 5min, taking an organic phase layer, transferring into a brown 1.5mL centrifuge tube, diluting with acetone by a certain multiple, filtering with a 0.22 μm organic filter head, and detecting by HPLC. The product peaks correspond to the standard retinol and retinal, and the yield is determined after making a standard curve.
3. The conditions for detecting retinol in saccharomyces cerevisiae by HPLC were as follows:
the liquid phase analyzer is Shimadzu LC-20AT, the chromatographic column is YMC-Pack ODS-AQ C18-H column, the column temperature is 40 deg.C, the detection wavelength is 352nm, 95% methanol and 5% acetonitrile are used as mobile phase, and the flow rate is 0.6 mL/min.
As shown in FIGS. 4 and 5, the retinol content in the product of Y03-33 was 106.24mg/L, the retinal content was 3.69mg/L, the retinol content in the product of Y03-34 was 83.63mg/L, the retinal content was 46.51mg/L, the retinol content in the product of Y03-43 was 122.03mg/L, and the retinal content was 9.51 mg/L. As shown in FIG. 6, Y03-43 produced 122.03mg/L of retinol without BHT and 401.65mg/L of retinol with BHT, which is 99.86% of total vitamin A.
Sequence listing
<110> Zhejiang university
<120> genetic engineering bacterium for selectively producing retinol, and construction method and application thereof
<160> 8
<170> SIPOSequenceListing 1.0
<210> 1
<211> 828
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 1
atgggtttaa tgttaattga ttggtgtgct ttagctttag ttgtttttat tggtttacct 60
catggtgctt tagatgctgc aatttcattt tctatgattt cttcagctaa aaggattgca 120
aggttagcag gtattttgtt gatttatttg ttgttagcaa ctgcattttt tttaatttgg 180
tatcaattac cagcattttc tttgttgatt tttttgttaa tttcaattat tcattttggt 240
atggcagatt ttaatgcatc accatctaaa ttgaaatggc ctcatattat tgctcatggt 300
ggtgttgtta cagtttggtt gccattaatt caaaaaaatg aagttactaa attgttttca 360
attttgacta atggtcctac tcctattttg tgggatattt tgttgatttt ttttttgtgt 420
tggtctattg gtgtttgttt acatacttat gaaactttga gatcaaaaca ttataatatt 480
gcatttgaat taattggttt gattttttta gcatggtatg cacctccatt agttacattt 540
gctacatatt tttgttttat tcattctagg aggcattttt catttgtttg gaaacaatta 600
caacacatgt catctaaaaa aatgatgatt ggttctgcta ttattttatc atgtacttct 660
tggttgattg gtggtggtat ttattttttt ctcaattcta aaatgattgc atcagaagct 720
gctttacaaa cagtttttat tggtttagca gctttgacag ttccacacat gattttaatt 780
gattttattt ttagaccaca ttcttcaagg attaaaatta aaaattaa 828
<210> 2
<211> 810
<212> DNA
<213> Escherichia coli (Escherichia coli)
<400> 2
atgactcata aagcaacgga gatcctgaca ggtaaagtta tgcaaaaatc ggtcttaatt 60
accggatgtt ccagtggaat tggcctggaa agcgcgctcg aattaaaacg ccagggtttt 120
catgtgctgg caggttgccg gaaaccggat gatgttgagc gcatgaacag catgggattt 180
accggcgtgt tgatcgatct ggattcacca gaaagtgttg atcgcgcagc cgacgaggtg 240
atcgccctga ccgataattg tctgtatggg atctttaaca atgccggatt cggcatgtat 300
ggcccccttt ccaccatcag ccgtgcgcag atggaacagc agttttccgc caactttttc 360
ggcgcacacc agctcaccat gcgcctgtta cccgcgatgt taccgcacgg tgaagggcgt 420
attgtgatga catcatcggt gatgggatta atctccacgc cgggtcgtgg cgcttacgcg 480
gccagtaaat atgcgctgga ggcgtggtca gatgcactgc gcatggagct gcgccacagc 540
ggaattaaag tcagcctgat cgaacccggt cccattcgta ctcgcttcac cgacaacgtc 600
aaccagacgc aaagtgataa accagtcgaa aatcccggca tcgccgcccg ctttacgttg 660
ggaccggaag cggtggtgga caaagtacgc catgctttta ttagcgagaa gccgaagatg 720
cgctatccgg tgacgctggt gacctgggcg gtaatggtgc ttaagcgcct gctgccgggg 780
cgcgtgatgg acaaaatatt gcaggggtga 810
<210> 3
<211> 993
<212> DNA
<213> Saccharomyces cerevisiae (S. cerevisiae)
<400> 3
atgttagacc cacgaatatt gccatactac gacccggctg tggagaggaa gattgctgta 60
gtaacaggcg gaaatacggg tattgggtgg tatactgtct tgcatttgta tttgcatggg 120
tttgtcgttt atatttgtgg gagaaactct cacaagattt cgaaagcaat ccaggagata 180
ctggcagaag caaagaagag gtgccatgaa gatgacgacg gttcaagccc aggcgcgggc 240
ccaggtccaa gcattcagcg tctagggtca ctgcactata tccatttgga tttgacagac 300
ttaaaatgtg tggagagagc ggcacttaaa attctcaagc tggaagacca catagacgtg 360
cttgttaaca atgcagggat tatggcggtg cccttagaaa tgacgaagga cggatttgaa 420
gtgcaattgc agactaacta catttcgcac ttcatcttca cgatgagatt attgccttta 480
ctgcgccatt gtcgtggcag gatcatttcc ctgtcctcga taggccatca tctagagttc 540
atgtactgga aactgagcaa gacgtgggat tacaaaccta atatgctttt cacatggttt 600
aggtacgcga tgagtaaaac cgcgctaatc caatgcacga agatgttggc catcaaatac 660
cctgacgttc tttgtctctc cgttcatccg ggtctggtga tgaacacaaa cttattcagt 720
tattggacaa ggttacccat cgtcggtatt ttcttttggc tgttgttcca ggtcgtaggg 780
ttctttttcg gcgtatcgaa cgaacaaggt tcactagctt ctttgaagtg tgcattggac 840
ccgaatttat ctgtcgaaaa agataacggg aagtacttca ccacgggggg taaagaatct 900
aaatcgagct acgtttctaa caatgtcgac gaagcggcat cgacttggat ctggaccgtt 960
catcaactaa gagaccgtgg tttcgatata taa 993
<210> 4
<211> 1131
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 4
atggattacg cgaacatcct cacagcaatt ccactcgagt ttactcctca ggatgatatc 60
gtgctccttg aaccgtatca ttacctagga aagaaccctg gaaaagaaat tcgatcacaa 120
ctcatcgagg ctttcaacta ttggttggat gtcaagaagg aggatctcga ggtcatccag 180
aacgttgttg gcatgctaca taccgctagc ttattaatgg acgatgtgga ggattcatcg 240
gtcctcaggc gtgggtcgcc tgtggcccat ctaatttacg ggattccgca gacaataaac 300
actgcaaact acgtctactt tctggcttat caagagatct tcaagcttcg cccaacaccg 360
atacccatgc ctgtaattcc tccttcatct gcttcgcttc aatcatccgt ctcctctgca 420
tcctcctcct cctcggcctc gtctgaaaac gggggcacgt caactcctaa ttcgcagatt 480
ccgttctcga aagatacgta tcttgataaa gtgatcacag acgagatgct ttccctccat 540
agagggcaag gcctggagct attctggaga gatagtctga cgtgtcctag cgaagaggaa 600
tatgtgaaaa tggttcttgg aaagacggga ggtttgttcc gtatagcggt cagattgatg 660
atggcaaagt cagaatgtga catagacttt gtccagcttg tcaacttgat ctcaatatac 720
ttccagatca gggatgacta tatgaacctt cagtcttctg agtatgccca taataagaat 780
tttgcagagg acctcacaga aggaaaattc agttttccca ctatccactc gattcatgcc 840
aacccctcat cgagactcgt catcaatacg ttgcagaaga aatcgacctc tcctgagatc 900
cttcaccgct gtgtaaacta catgcgcaca gaaacccact cattcgaata tactcaggaa 960
gtcctcaaca ccttgtcagg tgcactcgag agagaactag gaaggcttca aggagagttc 1020
gcagaagcta actcaaagat tgatcttgga gacgtagagt cggaaggaag aacggggaag 1080
aacgtcaaat tggaagcgat cctgaaaaag ctagccgata tccctctgtg a 1131
<210> 5
<211> 1197
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 5
atgagtacgt tggattcaca ttccctaaag ttacagagcg gctcgaagtt tgtaaaaata 60
aagccagtaa ataacttgag gagtagttca tcagcagatt tcgtgtcccc accaaattcc 120
aaattacaat ctttaatctg gcagaaccct ttacaaaatg tttatataac taaaaaacca 180
tggactccat ccacaagaga agcgatggtt gaattcataa ctcatttaca tgagtcatac 240
cccgaggtga acgtcattgt tcaacccgat gtggcagaag aaatttccca ggatttcaaa 300
tctcctttgg agaatgatcc caaccgacct catatacttt atactggtcc tgaacaagat 360
atcgtaaaca gaacagactt attggtgaca ttgggaggtg atgggactat tttacacggc 420
gtatcaatgt tcggaaatac gcaagttcct ccggttttag catttgctct gggcactctg 480
ggctttctat caccgtttga ttttaaggag cataaaaagg tctttcagga agtaatcagc 540
tctagagcca aatgtttgca tagaacacgg ctagaatgtc atttgaaaaa aaaggatagc 600
aactcatcta ttgtgaccca tgctatgaat gacatattct tacatagggg taattcccct 660
catctcacta acctggacat tttcattgat ggggaatttt tgacaagaac gacagcagat 720
ggtgttgcat tggccactcc aacgggttcc acagcatatt cattatcagc aggtggatct 780
attgtttccc cattagtccc tgctatttta atgacaccaa tttgtcctcg ctctttgtca 840
ttccgaccac tgattttgcc tcattcatcc cacattagga taaagatagg ttccaaattg 900
aaccaaaaac cagtcaacag tgtggtaaaa ctttctgttg atggtattcc tcaacaggat 960
ttagatgttg gtgatgaaat ttatgttata aatgaggtcg gcactatata catagatggt 1020
actcagcttc cgacgacaag aaaaactgaa aatgacttta ataattcaaa aaagcctaaa 1080
aggtcaggga tttattgtgt cgccaagacc gagaatgact ggattagagg aatcaatgaa 1140
cttttaggat tcaattctag ctttaggctg accaagagac agactgataa tgattaa 1197
<210> 6
<211> 398
<212> PRT
<213> Artificial Sequence (Artificial Sequence)
<400> 6
Met Ser Thr Leu Asp Ser His Ser Leu Lys Leu Gln Ser Gly Ser Lys
1 5 10 15
Phe Val Lys Ile Lys Pro Val Asn Asn Leu Arg Ser Ser Ser Ser Ala
20 25 30
Asp Phe Val Ser Pro Pro Asn Ser Lys Leu Gln Ser Leu Ile Trp Gln
35 40 45
Asn Pro Leu Gln Asn Val Tyr Ile Thr Lys Lys Pro Trp Thr Pro Ser
50 55 60
Thr Arg Glu Ala Met Val Glu Phe Ile Thr His Leu His Glu Ser Tyr
65 70 75 80
Pro Glu Val Asn Val Ile Val Gln Pro Asp Val Ala Glu Glu Ile Ser
85 90 95
Gln Asp Phe Lys Ser Pro Leu Glu Asn Asp Pro Asn Arg Pro His Ile
100 105 110
Leu Tyr Thr Gly Pro Glu Gln Asp Ile Val Asn Arg Thr Asp Leu Leu
115 120 125
Val Thr Leu Gly Gly Asp Gly Thr Ile Leu His Gly Val Ser Met Phe
130 135 140
Gly Asn Thr Gln Val Pro Pro Val Leu Ala Phe Ala Leu Gly Thr Leu
145 150 155 160
Gly Phe Leu Ser Pro Phe Asp Phe Lys Glu His Lys Lys Val Phe Gln
165 170 175
Glu Val Ile Ser Ser Arg Ala Lys Cys Leu His Arg Thr Arg Leu Glu
180 185 190
Cys His Leu Lys Lys Lys Asp Ser Asn Ser Ser Ile Val Thr His Ala
195 200 205
Met Asn Asp Ile Phe Leu His Arg Gly Asn Ser Pro His Leu Thr Asn
210 215 220
Leu Asp Ile Phe Ile Asp Gly Glu Phe Leu Thr Arg Thr Thr Ala Asp
225 230 235 240
Gly Val Ala Leu Ala Thr Pro Thr Gly Ser Thr Ala Tyr Ser Leu Ser
245 250 255
Ala Gly Gly Ser Ile Val Ser Pro Leu Val Pro Ala Ile Leu Met Thr
260 265 270
Pro Ile Cys Pro Arg Ser Leu Ser Phe Arg Pro Leu Ile Leu Pro His
275 280 285
Ser Ser His Ile Arg Ile Lys Ile Gly Ser Lys Leu Asn Gln Lys Pro
290 295 300
Val Asn Ser Val Val Lys Leu Ser Val Asp Gly Ile Pro Gln Gln Asp
305 310 315 320
Leu Asp Val Gly Asp Glu Ile Tyr Val Ile Asn Glu Val Gly Thr Ile
325 330 335
Tyr Ile Asp Gly Thr Gln Leu Pro Thr Thr Arg Lys Thr Glu Asn Asp
340 345 350
Phe Asn Asn Ser Lys Lys Pro Lys Arg Ser Gly Ile Tyr Cys Val Ala
355 360 365
Lys Thr Glu Asn Asp Trp Ile Arg Gly Ile Asn Glu Leu Leu Gly Phe
370 375 380
Asn Ser Ser Phe Arg Leu Thr Lys Arg Gln Thr Asp Asn Asp
385 390 395
<210> 7
<211> 1245
<212> DNA
<213> Saccharomyces cerevisiae (S. cerevisiae)
<400> 7
atgtttgtca gggttaaatt gaataaacca gtaaaatggt ataggttcta tagtacgttg 60
gattcacatt ccctaaagtt acagagcggc tcgaagtttg taaaaataaa gccagtaaat 120
aacttgagga gtagttcatc agcagatttc gtgtccccac caaattccaa attacaatct 180
ttaatctggc agaacccttt acaaaatgtt tatataacta aaaaaccatg gactccatcc 240
acaagagaag cgatggttga attcataact catttacatg agtcataccc cgaggtgaac 300
gtcattgttc aacccgatgt ggcagaagaa atttcccagg atttcaaatc tcctttggag 360
aatgatccca accgacctca tatactttat actggtcctg aacaagatat cgtaaacaga 420
acagacttat tggtgacatt gggaggtgat gggactattt tacacggcgt atcaatgttc 480
ggaaatacgc aagttcctcc ggttttagca tttgctctgg gcactctggg ctttctatca 540
ccgtttgatt ttaaggagca taaaaaggtc tttcaggaag taatcagctc tagagccaaa 600
tgtttgcata gaacacggct agaatgtcat ttgaaaaaaa aggatagcaa ctcatctatt 660
gtgacccatg ctatgaatga catattctta cataggggta attcccctca tctcactaac 720
ctggacattt tcattgatgg ggaatttttg acaagaacga cagcagatgg tgttgcattg 780
gccactccaa cgggttccac agcatattca ttatcagcag gtggatctat tgtttcccca 840
ttagtccctg ctattttaat gacaccaatt tgtcctcgct ctttgtcatt ccgaccactg 900
attttgcctc attcatccca cattaggata aagataggtt ccaaattgaa ccaaaaacca 960
gtcaacagtg tggtaaaact ttctgttgat ggtattcctc aacaggattt agatgttggt 1020
gatgaaattt atgttataaa tgaggtcggc actatataca tagatggtac tcagcttccg 1080
acgacaagaa aaactgaaaa tgactttaat aattcaaaaa agcctaaaag gtcagggatt 1140
tattgtgtcg ccaagaccga gaatgactgg attagaggaa tcaatgaact tttaggattc 1200
aattctagct ttaggctgac caagagacag actgataatg attaa 1245
<210> 8
<211> 1486
<212> DNA
<213> Saccharomyces cerevisiae (S. cerevisiae)
<400> 8
atgaatgcgg accatcacct gcaacagcag cagcaacagc gacaacagca tcaacaacaa 60
cagcatcaac aacaacagca tcagcatcag catcaacagc agcagcacac gatattacaa 120
aatgtgtcga acactaacaa tatcggcagc gattcgctgg cgtcacagcc tttcaacacg 180
actactgttt cctctaacaa ggacgacgtt atggtgaact ctggggcaag agaacttcca 240
atgcccttac atcagcagca gtatatatac ccttactatc agtatacaag taataacagt 300
aacaacaata atgtgacggc tggtaacaat atgtctgcgt cgccgattgt ccataacaac 360
agcaacaaca gcaacaacag caatatttct gcttctgatt acactgtcgc aaacaacagt 420
actagcaata ataacaataa taataataat aacaacaata ataacaataa tattcaccca 480
aaccagttta ctgcggccgc aaatatgaac tcaaatgctg cagcggctgc ttattactcc 540
ttccccactg cgaatatgcc aataccgcaa caggatcaac aatatatgtt caatcctgct 600
tcatacataa gccattacta ttcagcagtt aacagcaata acaatggtaa taacgccgct 660
aacaatggca gcaacaactc ttctcactca gccccagccc cggcccccgg tccaccccat 720
caccggccat aaaggccatc accatcatag taatacacac aacaacctca acaatggtgg 780
tgctgtaaat acaaacaacg ctcctcagca ccatccaacg ataataacgg atcaatttca 840
attccaacta caacaaaacc cttctccaaa tttgaatctc aatattaacc cggcacaacc 900
tctgcatcta cctcctggtt ggaaaataaa cactatgccg caaccacgtc ctacgacagc 960
acctaaccat ccccctgcgc cggtgccttc ttcgaaccct gtggcctcga acttggttcc 1020
tgccccatca tcagaccata aatatatcca tcaatgccaa ttttgtgaga agtctttcaa 1080
aagaaaatca tggttgaaaa ggcacctatt gtcacactcg caacaaagac attttctatg 1140
cccttggtgc ttaagcaggc agaagagaaa agataatctt ttacagcata tgaaactcaa 1200
gcatacaaat tatttattag acgaactcaa gaaaaacaac atcatcttta actacaacaa 1260
ttcttcctcc tctaataata acaacgacaa taataataat aataacagca atagcgctag 1320
cggcagtggc ggtgccggtg ccgcggcggc agcagcaaca gctcccgaaa atgaagatgg 1380
aaacggttac gatacaaaca tcaagacttt aatcaatgat ggtgtactga ataaggacga 1440
cgttaaacgt gttttgaata accttattgt tagtcacaac aaatag 1486

Claims (7)

1. A genetic engineering bacterium for selectively producing retinol is characterized in that the genetic engineering bacterium takes an engineering strain for producing beta-carotene as a starting bacterium, a beta-carotene 15, 15' -dioxygenase coding gene, an aldehyde reductase coding gene, a retinol dehydrogenase coding gene, a geranylgeranyl pyrophosphate synthase mutant coding gene and a coding gene of NADH kinase for cutting off N-terminal mitochondrion positioning peptide are integrated on a chromosome, and meanwhile, a mevalonate pathway transcription inhibition factor gene is knocked out;
or the genetic engineering bacteria take an engineering strain for producing beta-carotene as a starting bacteria, the host bacteria contain a recombinant expression plasmid containing a beta-carotene 15, 15' -dioxygenase coding gene, an aldehyde reductase coding gene, a retinol dehydrogenase coding gene, a geranylgeranyl pyrophosphate synthase mutant coding gene and a coding gene of NADH kinase for cutting off N-terminal mitochondrion positioning peptide, and meanwhile, a mevalonate pathway transcription inhibition factor gene is knocked out;
the nucleotide sequence of the beta-carotene 15, 15' -dioxygenase coding gene is shown as SEQ ID NO. 1; the nucleotide sequence of the aldehyde reductase coding gene is shown as SEQ ID NO. 2; the nucleotide sequence of the retinol dehydrogenase encoding gene is shown as SEQ ID NO. 3; the nucleotide sequence of the geranylgeranyl pyrophosphate synthase mutant coding gene is shown as SEQ ID NO. 4; the nucleotide sequence of the encoding gene of the NADH kinase for cutting off the mitochondrial localization peptide at the N end is shown as SEQ ID NO. 5; the nucleotide sequence of the mevalonate pathway transcription repressing factor gene is shown in SEQ ID NO. 8.
2. The method for constructing genetically engineered bacteria that selectively produce retinol according to claim 1, which comprises: taking an engineering strain for producing beta-carotene as a starting strain, respectively integrating a beta-carotene 15, 15' -dioxygenase coding gene, an aldehyde reductase coding gene, a retinol dehydrogenase coding gene, a geranylgeranyl pyrophosphate synthase mutant coding gene and a coding gene of NADH kinase for cutting off N-terminal mitochondrion positioning peptide to a chromosome of the engineering strain for producing the beta-carotene through integrating plasmids, and knocking out a mevalonic acid pathway transcription inhibition factor gene to obtain the genetic engineering strain for selectively producing the retinol;
or by taking an engineering strain producing beta-carotene as a host bacterium, introducing a recombinant expression plasmid containing a beta-carotene 15, 15' -dioxygenase coding gene, an aldehyde reductase coding gene, a retinol dehydrogenase coding gene, a geranylgeranyl pyrophosphate synthase mutant coding gene and a coding gene of NADH kinase for cutting off N-terminal mitochondrion localization peptide, and knocking out a mevalonate pathway transcription inhibitor gene.
3. The method for constructing genetically engineered bacteria for selective production of retinol as claimed in claim 2, comprising the steps of:
(1) cloning a gene coding beta-carotene 15, 15' -dioxygenase with a nucleotide sequence shown as SEQ ID NO.1 to P of pUMRI-LPP1 GAL1 The subsequent multiple cloning sites to obtain recombinant plasmid pUMRI-LPP 1-BLH;
(2) cloning a geranylgeranyl pyrophosphate synthase mutant coding gene with a nucleotide sequence shown as SEQ ID NO.4 and an aldehyde reductase coding gene with a nucleotide sequence shown as SEQ ID NO.2 to P of pUMRI-DPP1 respectively GAL2 And P GAL7 Obtaining a recombinant plasmid pUMRI-DPP1-CrtE03M-YBBO from the later multiple cloning sites;
(3) cloning the upstream and downstream homologous arms of mevalonate pathway transcription inhibitor gene into pUMRI21 plasmid to construct pUMRI-MOT3, and cloning the coding gene of NADH kinase with nucleotide sequence shown as SEQ ID NO.5 and for cutting mitochondrial localization peptide at N end and the coding gene of retinol dehydrogenase with nucleotide sequence shown as SEQ ID NO.3 into P of pUMRI-MOT3 GAL10 And P GAL1 Then obtaining a recombinant plasmid pURI-MOT 3-tPOS5-ENV9 from the multiple cloning sites;
(4) the recombinant plasmids pUMRI-LPP1-BLH, pUMRI-DPP1-CrtE03M-YBBO and pUMRI-MOT3-tPOS5-ENV9 are sequentially transformed into an engineering strain Ycarot-02 for producing beta-carotene, and a recombinant bacterium which integrates a beta-carotene 15, 15' -dioxygenase coding gene, an aldehyde reductase coding gene, a retinol dehydrogenase coding gene, a geranylgeranyl pyrophosphate synthase mutant coding gene and a coding gene of NADH kinase for cutting off N-terminal mitochondrial positioning peptide in a chromosome and is knocked out a mevalonate pathway transcription inhibitor gene is the genetic engineering bacterium for selectively producing the retinol.
4. Use of the genetically engineered bacterium of claim 1 for selective production of retinol in the preparation of retinol.
5. A preparation method of retinol is characterized by comprising the following steps:
1) the genetically engineered bacterium for selectively producing retinol according to claim 1, after being expanded and cultured, is inoculated into a fermentation medium containing ferrous ions, an extractant and an antioxidant are added, wherein the extractant is dodecane, and the antioxidant is dibutylhydroxytoluene, and the fermentation broth is obtained by shaking culture;
2) collecting the organic phase in the fermentation liquid, and separating to obtain the retinol.
6. The process for producing retinol as in claim 5, wherein the concentration of ferrous ion in the fermentation medium is 1.26-1.80 mM; adding 2.5-10.0 mL of extractant into every 50mL of culture solution; 0.25 to 1.0g of an antioxidant is added to 50mL of the culture medium.
7. The process for the preparation of retinol as in claim 5, wherein the two-phase fermentation conditions are: culturing for 72-84 hours in a constant temperature shaking table at the speed of 200-250 rpm and the temperature of 28-30 ℃ in a dark place.
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