CN111961684B - Method for improving disease resistance of wheat by inhibiting expression of TaVQ5 gene in wheat - Google Patents
Method for improving disease resistance of wheat by inhibiting expression of TaVQ5 gene in wheat Download PDFInfo
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Abstract
The invention discloses a method for improving disease resistance of wheat by inhibiting expression of TaVQ5 gene in wheat. The invention adopts CRISPR/Cas9 technology, edits TaVQ5 gene at fixed point, knocks out wheat TaVQ5 gene by causing frameshift mutation, and obtains new wheat germplasm with obviously improved powdery mildew and banded sclerotial blight resistance. The invention improves the powdery mildew and banded sclerotial blight resistance of wheat, innovates disease-resistant germplasm resources of wheat, has important significance for new variety cultivation, environmental sanitation and grain safety, and has important application and popularization values.
Description
Technical Field
The invention relates to a method for improving disease resistance of wheat by inhibiting expression of TaVQ5 gene in the wheat in the field of biotechnology.
Background
Wheat (triticum aestivum l) is one of the most important grain crops in the world, provides basic protein and carbohydrate for human beings, enhances the disease and insect resistance of wheat varieties, improves the yield and quality characteristics, and is an important target for improving wheat.
Wheat powdery mildew is an epidemic disease caused by wheat powdery mildew (Blumeria graminis f.sp.tritici), and is one of the main diseases in wheat production. Wheat powdery mildew can occur and cause damage in seedling stage and adult stage, the wheat powdery mildew damages organs of the overground part of wheat plants, mainly leaves, and can also damage stalks and ears when the disease is serious, and the yield loss can be 5-34% in the circulation year.
The sheath blight of wheat is mainly caused by the invasion of the basal part of wheat straw by Rhizoctonia (Rhizoctonia cerealis). After infection, the base of the stalk is rotten, the lodging resistance of the wheat is reduced, and dead seedlings and withered white ears occur in severe cases, so that the yield loss is caused.
A large number of researches show that the cultivation and planting of disease-resistant varieties are the most economic, effective, safe and reliable way for preventing and treating wheat powdery mildew and banded sclerotial blight, and the disease resistance identification, the resistance source screening and the disease-resistant new gene excavation of the varieties are the basis of the research for improving the disease resistance of wheat.
The traditional crossbreeding takes long time and has large workload, and the shape directional improvement is difficult to realize; it is difficult to perform precise site-directed mutagenesis by physical, chemical, biological and other mutagenesis means. In recent years, genome site-directed editing technologies represented by CRISPR/Cas9 technology have become a new means for plant breeding and direct study of gene functions. The basic principle is that a designed sgRNA (single-guide RNA) is utilized to mediate Cas9 nuclease to perform specific recognition and targeted cleavage on a target site, and an intracellular error-prone repair mechanism is utilized to introduce mutation. The method has the advantages of simple operation, short experimental period and low cost, can get a novel germ plasm resource without transgenosis by throwing away a vector sequence in the later stage, becomes a technology for efficiently and conveniently obtaining a specific gene mutant, and has important significance for germ plasm resource innovation and gene function research.
VQ proteins are a class of plant-specific proteins, all of which have a conserved VQ-motif, FxxxVQx (L/V/F) TG, where x is any amino acid. In 2002, VQ proteins were first discovered in arabidopsis thaliana, and subsequently, such proteins have also been discovered and identified in plants such as wheat, cotton, maize, grape, soybean, and the like. Studies of VQ function have found that it is involved not only in regulating various life processes of plants, but also in plant responses to biotic and abiotic stresses. Due to the large wheat genome and allohexaploids, the identification and biological functions of wheat VQ members remain to be further studied.
Disclosure of Invention
The invention aims to solve the technical problem of how to improve the resistance of wheat to powdery mildew and/or banded sclerotial blight.
In order to solve the above technical problems, a first object of the present invention is to provide a method for improving disease resistance of wheat, comprising the steps of: inhibiting the expression of TaVQ5 gene in receptor wheat to obtain target wheat with disease resistance higher than that of the receptor wheat; the disease resistance is resistance to powdery mildew and/or banded sclerotial blight; the TaVQ5 gene is a gene for coding a TaVQ5 protein; the protein is the following A1), A2) or A3):
A1) the amino acid sequence is the protein of the amino acid sequence shown in any one of sequence 3, sequence 5 or sequence 7 in the sequence table;
A2) a protein which is obtained by substituting and/or deleting and/or adding one or more amino acid residues in an amino acid sequence shown in any one of a sequence 3, a sequence 5 or a sequence 7 in a sequence table, has more than 80% of identity with the protein shown in A1), and is related to plant powdery mildew resistance and/or banded sclerotial blight resistance;
A3) a fusion protein obtained by connecting protein tags at the N-terminal or/and the C-terminal of A1) or A2).
In the method, the sequence 3 in the sequence table is composed of 221 amino acid residues, the sequence 5 in the sequence table is composed of 226 amino acid residues, and the sequence 7 in the sequence table is composed of 224 amino acid residues.
In the above methods, identity refers to the identity of amino acid sequences. The identity of the amino acid sequences can be determined using homology search sites on the Internet, such as the BLAST web pages of the NCBI home website. For example, in the advanced BLAST2.1, by using blastp as a program, setting the value of Expect to 10, setting all filters to OFF, using BLOSUM62 as a Matrix, setting Gap existence cost, Per residual Gap cost, and Lambda ratio to 11, 1, and 0.85 (default values), respectively, and performing a calculation by searching for the identity of a pair of amino acid sequences, a value (%) of identity can be obtained.
In the above method, the 80% or greater identity may be at least 81%, 85%, 90%, 91%, 92%, 95%, 96%, 98%, 99% or 100% identity.
In the above method, the TaVQ5 gene may be specifically a gene represented by E1 or E2 as follows:
e1, wherein the coding sequence (ORF) of the coding strand is a DNA molecule of any one of a sequence 2, a sequence 4 and a sequence 6 in a sequence table;
e2, the nucleotide sequence is any one DNA molecule of sequence 2, sequence 4 and sequence 6 in the sequence table.
In the method, the inhibition of the expression of the TaVQ5 gene in the wheat is realized by performing gene editing on the TaVQ5 gene in the wheat. The gene editing is realized by means of a CRISPR/Cas9 system.
In the method, the CRISPR/Cas9 system comprises a plasmid containing Cas9 and sgRNA, and the target sequence of the sgRNA can be the 1 st to 20 th sites of the sequence 8 in the sequence table.
In the method, the encoding DNA of the sgRNA is 6915-7017 th site of the sequence 1 in the sequence table.
In a specific embodiment of the invention, the recombinant vector of the CRISPR/Cas9 system comprises the recombinant vector pCXUN-Cas 9-gRNA; the recombinant vector pCXUN-Cas9-gRNA has encoding DNA of sgRNA consisting of 103 nucleotides, and the corresponding DNA molecule is 6915-7017 th site of a sequence 1 in a sequence table.
In the method, the target wheat is wheat which meets the following conditions: one or two or three of the A, B and D genomes are mutated at the target region.
In order to solve the above technical problems, the present invention also provides an agent against powdery mildew and/or banded sclerotial blight, the active ingredient of which is a substance that inhibits the expression of the gene encoding the TaVQ5 protein, reduces the abundance of the TaVQ5 protein, and/or knockouts the gene encoding the TaVQ5 protein.
In the above agent for resisting powdery mildew and/or banded sclerotial blight, the substance contains the following F1), F2) or F3):
F1) sgRNA, siRNA, shRNA, miRNA or antisense RNA targeting the gene;
F2) generating a DNA molecule that targets a sgRNA of the gene, a DNA molecule that generates an siRNA that targets the gene, a DNA molecule that generates an shRNA that targets the gene, a DNA molecule that generates an miRNA that targets the gene, or a DNA molecule that generates an antisense RNA that targets the gene;
F3) an expression vector that produces sgRNA targeting the gene, an expression vector that produces siRNA targeting the gene, an expression vector that produces shRNA targeting the gene, an expression vector that produces miRNA targeting the gene, or an expression vector that produces antisense RNA targeting the gene.
The active ingredients of the agent for resisting powdery mildew and/or banded sclerotial blight can also contain other biological components or/and non-biological components, and other active ingredients of the agent can be determined by a person skilled in the art according to the disease resistance effect of plants.
The invention also provides a TaVQ5 protein, wherein the TaVQ5 protein is a protein of A1), A2) or A3) as follows:
A1) the amino acid sequence is the protein of the amino acid sequence shown in any one of sequence 3, sequence 5 or sequence 7 in the sequence table;
A2) a protein which is obtained by substituting and/or deleting and/or adding one or more amino acid residues in an amino acid sequence shown in any one of a sequence 3, a sequence 5 or a sequence 7 in a sequence table, has more than 80% of identity with the protein shown in A1), and is related to plant powdery mildew resistance and/or banded sclerotial blight resistance;
A3) a fusion protein obtained by connecting protein tags at the N-terminal or/and the C-terminal of A1) or A2).
The invention also provides a nucleic acid molecule encoding a TaVQ5 protein, which is a gene shown as E1 or E2 as follows:
e1, the coding sequence is DNA molecule of any one of sequence 2, sequence 4 and sequence 6 in the sequence table;
e2, the nucleotide sequence is any one DNA molecule of sequence 2, sequence 4 and sequence 6 in the sequence table.
The inventor of the invention utilizes a new gene TaVQ5 which is separated and cloned from wheat in the laboratory and is related to jasmonic acid signal conduction, adopts CRISPR/Cas9 technology to edit the TaVQ5 gene at a fixed point, and knocks out the TaVQ5 gene by causing frameshift mutation, thereby obtaining a new wheat germplasm with obviously improved resistance to powdery mildew and banded sclerotial blight. Wheat powdery mildew and banded sclerotial blight are main diseases of wheat, and not only cause the yield reduction of wheat, but also cause the quality reduction of the wheat. The invention improves the powdery mildew and banded sclerotial blight resistance of wheat, innovating disease-resistant germplasm resources of wheat, and has important significance for new variety cultivation, environmental sanitation and grain safety. The invention has great application and popularization values.
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FIG. 1 shows a part T in example 2 of the present invention0Transfer TaVQ5 gene plant toDetecting an electrophoretogram of a vector sequence after BsrI enzyme digestion, wherein M is 2k Marker, 2, 34, 40, 55, 74, 216, 217, 219, 220, 255-1, 255-2, 255-3, 255-4 and 255-5 are T0The plants were tested by passage, WT/-was negative control, WT/+ was positive control.
FIG. 2 shows a part T in example 2 of the present invention0The sequencing result diagram of a plant transformed with TaVQ5 gene, wherein TaVQ5-WT-A is the A genome sequence of TaVQ5 gene of wild type Zhengmai 7698; TaVQ5-WT-B is the B genome sequence of the TaVQ5 gene of wild type Zheng wheat 7698; TaVQ5-WT-D is the D genomic sequence of the TaVQ5 gene of wild type Zheng wheat 7698; TaVQ5-34-A is T0The A genome sequence of the TaVQ5 gene substituting for TaVQ 5-34; TaVQ5-34-B is T0The B genome sequence of the TaVQ5 gene of the TaVQ 5-34; TaVQ5-34-D is T0The D genome sequence of the TaVQ5 gene of the TaVQ 5-34; TaVQ5-74-A is T0The A genome sequence of TaVQ5 gene of TaVQ 5-74; TaVQ5-74-B is T0The B genome sequence of the TaVQ5 gene of the generations of TaVQ 5-74; TaVQ5-74-D is T0The D genome sequence of the TaVQ5 gene of the generations of TaVQ 5-74; TaVQ5-255-A is T0The A genome sequence of TaVQ5 gene substituting for TaVQ 5-255; TaVQ5-255-B is T0The B genome sequence of TaVQ5 gene substituting for TaVQ 5-255; TaVQ5-255-D is T0The D genome sequence of the TaVQ5 gene of the generations of TaVQ 5-255. The gRNA target sequence is underlined; bold underline indicates inserted bases; "-" indicates deletion of one base; "-/-" indicates the deletion of multiple bases; "wt" means the same as wild type zheng mai 7698; "+ 1" indicates an addition of one base; "-7" indicates deletion of 7 bases, and so on.
FIG. 3 shows a part T in example 2 of the present invention1A TaVQ5 transgenic plant is used for detecting an electrophoretogram of Cas9/gRNA/hptII, wherein M is 2Kmarker, wt is wild-type Zhengmai 7698, and 1-20 randomly selected 20T1The generation TaVQ5-34 plants, "+" is a positive control and "-" is a blank control.
FIG. 4 shows T in example 3 of the present invention3Sequencing result chart of plant transformed with TaVQ5 gene. The gRNA target sequence is underlined; bold underline indicates inserted bases; "-" indicates deletion of one base; "-// -"indicates deletion of a plurality of bases; "+ 1" indicates an addition of one base; "-7" indicates deletion of 7 bases, and so on. TaVQ5-WT-A is the A genome sequence of TaVQ5 gene of wild type Zheng Mai 7698; TaVQ5-34-2-9-B is TaVQ5-34-2-9 (belonging to T)3Generation of TaVQ5-34), and so on.
FIG. 5 shows T in example 3 of the present invention3The resistance identification result of wheat sheath blight of a plant transformed with TaVQ5 gene, wherein CK is 7698 of control wild type Zheng wheat; the significance analysis result of each plant compared with CK is analyzed by t-test, which represents 0.01<P<0.05; denotes 0.001<P<0.01; denotes P<0.001。
Detailed Description
The present invention is described in further detail below with reference to specific embodiments, which are given for the purpose of illustration only and are not intended to limit the scope of the invention. The examples provided below serve as a guide for further modifications by a person skilled in the art and do not constitute a limitation of the invention in any way.
In the quantitative tests in the following examples, three replicates were set up and the results averaged.
The experimental procedures in the following examples are conventional unless otherwise specified. Materials, reagents and the like used in the following examples are commercially available unless otherwise specified.
Zheng Mai 7698, a wheat variety in the following examples, which is susceptible to powdery mildew, is described in non-patent documents "Guo G, Lei M, Wang Y, Song B, Yang J, et al, Accumulation of As, Cd, and Pb in pure wheat crops growth in associated resources and associated Health assessment [ J ]. Journal of Environmental Research and Public Health,2018,15(11): 2601", publicly available from the institute of crop science of Chinese agricultural sciences to repeat the experiments of this application and is not applicable for other uses.
Powdery mildew bacterium E09 in the following examples is described in non-patent document "Chengtianling. Shanxi province wheat variety resistance identification and evaluation for powdery mildew disease.2019. Jiangsu agricultural science", which is publicly available from the institute of crop science of Chinese academy of agricultural sciences to repeat the experiments of the present application and is not applicable for other uses.
The disease grade standard of wheat powdery mildew (see Chengtianling, identification and evaluation of resistance of wheat varieties in Shanxi province to powdery mildew, 2019, Jiangsu agricultural science) is specifically shown in Table 1.
TABLE 1 wheat powdery mildew disease grade Standard
Wherein, 0 grade is immunity, 1-2 grade is high resistance, 3-4 grade is medium resistance, 5-6 grade is medium feeling, 7-8 grade is high feeling, and 9 grade is extreme feeling.
The rhizoctonia solani R0301 in the following examples is described in the non-patent document, "Ervoniphaera, improvement of the identification method of the resistance to rhizoctonia solani in the seedling stage of wheat and screening of the disease-resistant variety, 2019, the report on plant pathology", which is publicly available from the research institute of crop science of Chinese academy of agricultural sciences to repeat the application experiment and cannot be used for other purposes.
The disease grade standard of wheat sharp eyespot (Wangfuyu, identification and evaluation of resistance of wheat main cultivar of Shandong province to sharp eyespot 2016, modern agricultural science) is shown in Table 2.
TABLE 2 sheath blight disease class criteria for wheat
Sheath blight disease grade of wheat (IT) | Sheath blight disease of |
Level | |
0 | The scab is not generated in the leaf sheath and the stem; |
|
Is developed from the leaf sheathNon-invasion of |
Stage | |
2 | 1/4 for invasion of lesion into insufficient |
Grade | |
3 | 1/4-1/2 of lesion spots invading |
4 |
1/2-3/4 of plant disease spots invading |
Grade | |
5 | The plant has lesion on leaf sheath and stem, and withered booting ear or withered white ear |
Wherein, 0 grade represents immunity, 1 grade represents resistance, 2 grade represents resistance, 3 grade-4 grade represents feeling, and 5 grade represents high feeling.
Disease Index (DI) [ (Σ number of diseased plants at each stage × corresponding disease stage)/(total number of plants × highest disease stage) ] × 100.
Example 1 preparation of recombinant plasmid
A recombinant plasmid pCXUN-Cas9-gRNA was artificially synthesized. The recombinant plasmid pCXUN-Cas9-gRNA is a circular plasmid. The nucleotide sequence of the recombinant plasmid pCXUN-Cas9-gRNA is shown as a sequence 1 in a sequence table. In the sequence 1, from the 5' end, the 115-position 367 nucleotide is reversely complementary with the NOS terminator, the 392-position 4522 nucleotide is reversely complementary with the coding gene of the Cas9 protein, the 4544-position 6533 nucleotide is reversely complementary with the Ubi promoter, the 6552-position 6914 nucleotide is the U6 promoter, and the 6915-position 7017 nucleotide is the coding gene of the sgRNA (wherein the 6915-position 6934 nucleotide is the target sequence recognition region). The recombinant plasmid pCXUN-Cas9-gRNA expresses sgRNA, the target sequence of the sgRNA is positioned in a wheat TaVQ5 gene, and the specific target sequence is shown as a sequence 8 in a sequence table.
In wheat cDNA: the coding region of the TaVQ5 gene in the A genome (corresponding to the A chromosome group) is shown as a sequence 2 in the sequence table (protein shown as a sequence 3 in the coding sequence table); the coding region of the TaVQ5 gene in the B genome (corresponding to the B chromosome group) is shown as a sequence 4 in the sequence table (protein shown as a sequence 5 in the coding sequence table); the coding region of the TaVQ5 gene in the D genome (corresponding to the D chromosome group) is shown as a sequence 6 in the sequence table (coding protein shown as a sequence 7 in the sequence table).
Example 2 Gene-edited wheat obtained by biolistic method Using sgRNA
One, genetic gun mediated wheat genetic transformation
1. And taking the young embryo of Zhengmai 7698 which is a wheat variety about 14 days after pollination as an explant. Inoculating the explant to hypertonic culture medium, and culturing at 22-25 deg.C in dark for 1-2 days.
Hypertonic culture medium: the MS minimal medium is added with sucrose, and the concentration of the sucrose is 180 g/L.
2. The recombinant plasmid pCXUN-Cas9-gRNA is used as DNA to be transformed, a PDS-1000/He gene gun of BIO-RAD company is adopted to bombard the immature embryo in the step 1 (Psi900, 27.5cmHg column), the bombarded immature embryo is transferred to an induction culture medium, and dark culture is carried out for 2-3 weeks at the temperature of 22-25 ℃.
The induction culture medium is a culture medium which takes an MS culture medium as a basic culture medium and is added with Vc (vitamin C), 2,4-D (2, 4-dichlorophenoxyacetic acid) and cane sugar, the concentration of Vc in the induction culture medium is 100mg/L, the concentration of 2,4-D in the induction culture medium is 0.5mg/L, the concentration of cane sugar is 120g/L, and the pH value of the culture medium is 5.8.
3. Taking the explant which is subjected to the step 2, and sequentially carrying out regeneration and strong seedling culture to obtain T0Plants 345 were generated. The specific method comprises the following steps:
regeneration culture: the resistant calli after induction culture were transferred to regeneration medium and cultured under light for 3-6 weeks at 16h day/8h night, 24 ℃.
The regeneration culture medium adopts MS culture medium as basic culture medium, and 2,4-D (2, 4-dichlorophenoxyacetic acid) and CuSO are added4And Zeatin, wherein the concentration of 2,4-D is 0.05mg/L, CuSO4The concentration of (2) was 5mmol/L, and the Zeatin concentration was 5 mg/L. The medium contained hygromycin Hpt at a concentration of 15mg/L, and the pH of the medium was 5.8.
Strong seedling culture: green seedlings were transferred to strong seedling medium and cultured under light for 3 weeks at 16h day/8h night, 24 ℃.
The strong seedling culture medium takes 1/2MS culture medium as a basic culture medium, 25g of cane sugar is added, and the pH value of the culture medium is 5.8.
Second, detection of fixed point editing
1. For T0Identification of the plant
The test plants were: t obtained in step one of 345 plants0The generation plant, Zheng Mai 7698 (as reference plant).
1.1, extracting genome DNA of the leaf of 345 test plants as a template, and carrying out PCR amplification by using genome specific primers A, B and D of TaVQ 5. The three pairs of genome specific primers are respectively as follows:
primer set (A genome-specific primer) consisting of AF1 and AR1
AF1:5’-CGACCCCACACCCACCCTGA-3’;
AR1:5’-ATGTCCGCGCCGCCGCCGCCGTAGT-3’;
Primer set (B genome-specific primer) consisting of BF1 and BR1
BF1:5’-ACCCGCGCCAGCCGTCGGTTCG-3’;
BR1:5’-CTGCTGCAGGGACGAGGTGACA-3’;
Primer pair consisting of DF1 and DR1 (D genome-specific primer)
DF1:5’-GGCGAGCCCGACAGGACGGT-3’;
DR1:5’-CGAACGACATCACGGCCGAGG-3’。
TaVQ5 gene PCR reaction system: 5. mu.L of Fast Pfu buffer, 5. mu. L, dNTP 2. mu.L of PCR stimulant, 200ng of template and ddH for upstream and downstream primers (10. mu.M) of 0.5. mu. L, Pfu 0.5.5. mu. L, DNA, respectively2Make up to 25. mu.L of O. The reaction conditions were as follows: 95 ℃ 2min, 95 ℃ 20s, A genome 69 ℃ 20s/B genome 67 ℃ 20s/D genome 62 ℃ 20s, 72 ℃ 20s, 35 cycles.
1.2, carrying out enzyme digestion screening on the product of the PCR reaction by using Bsr I, carrying out amplification by combining with a vector sequence (Cas9/Hpt/TaU6, and respectively carrying out amplification by using primers of Cas9, Hpt and TaU 6) to preliminarily detect a transgenic plant and a genome editing plant, and selecting a single clone for sequencing the PCR product which is not cut to determine the genotype of the editing plant.
Identifying a Cas9 gene by adopting a primer pair consisting of Cas9-F and Cas 9-R;
Cas9-F:5’-TCGACAAGAAGTACTCCATCGGC-3’;
Cas9-R:5’-CAAGAGAGAGGGCGATCAGGTTG-3’。
identifying the sgRNA gene by adopting a primer pair consisting of TaU6-F and TaU 6-R;
TaU6-F:5’-CTGACAGTTCTGGTGCTCAAC-3’;
TaU6-R:5’-AAAGCACCGACTCGGTGCCA-3’。
and identifying the hptII gene by adopting a primer pair consisting of Hpt-F and Hpt-R.
Hpt-F:5’-GAGGGCGTGGATATGTCCTG-3’;
Hpt-R:5’-ATTGACCGATTCCTTGCGGT-3’。
And (3) PCR reaction system: 5. mu.L of Fast Pfu buffer, 5. mu. L, dNTP 2. mu.L of PCR stimulant, 200ng of template and ddH for upstream and downstream primers (10. mu.M) of 0.5. mu. L, Pfu 0.5.5. mu. L, DNA, respectively2Make up to 25. mu.L of O. The reaction conditions were as follows: 95 ℃ for 2min, 95 ℃ for 20s and an annealing temperature of 56 ℃. The PCR product was digested with Bsr I enzyme at 37 ℃ for 30 min. BsrI restriction system: PCR product 5. mu.L, BsrI enzyme 0.3. mu.L, Bufer 1. mu.L, ddH2O 3.7μL。
If the PCR amplification product of DNA of the plant is only one and is identical with the nucleotide sequence of the PCR amplification product of Zheng wheat 7698, the plant is wild type. If the PCR amplification products of DNA of a plant are two, one is identical to the nucleotide sequence of the PCR amplification product of Zheng wheat 7698, and the other is mutated (mutation includes deletion, insertion or substitution of one or more nucleotides) compared with the nucleotide sequence of the PCR amplification product of Zheng wheat 7698, the plant is heterozygous. If the PCR amplification products of DNA of the plant are two kinds, both of them are mutated (mutation includes deletion, insertion or substitution of one or more nucleotides) compared with the nucleotide sequence of the PCR amplification product of Zheng Mai 7698, the plant is biallelic mutant. If the PCR amplification product of DNA of a plant is one and mutation (mutation including deletion, insertion or substitution of one or more nucleotides) occurs compared with the nucleotide sequence of the PCR amplification product of Zheng Mai 7698, the plant is a homozygous mutant. If the nucleotide sequence of the PCR amplification product of the plant DNA is more than three, the plant is chimeric. Plants of heterozygous, biallelic, homozygous, and chimeric types are collectively referred to as edited plants.
Of the 345 plants, 15 were identified as positive plants, of which 11 plants with edited genomes, 1 containing no vector sequence, were the product of transient expression cleavage of CRISPR/Cas9, and 3 containing vector sequence but not edited. The results of BsrI digestion and vector sequence detection are shown in FIG. 1.
Part T0The results of sequencing the generation-edited plants are shown in FIG. 2.
Part T0The genotype of the generation editing plants based on the genome of the target sequences a, B, D, the type of mutation based on the target sequences, the case of carrying the Cas9 gene, the case of carrying the sgRNA gene and the case of carrying the hptII gene are shown in table 3.
TABLE 3
Note: i represents an insertion, i1 represents an insertion of 1 nucleotide, and so on; d represents deletion, d7 represents deletion of 7 nucleotides, and so on; wt represents wild type; before and after "/" represent two chromosomes, respectively; for example, i1/wt represents i1 for the target sequence in the D genome and the wild type for the other chromosome. Y represents that the identification result is positive, and N represents that the identification result is negative.
2. For T1Identification of the plant
Get T0Plant generation TaVQ5-34, T0Plant generation TaVQ5-74, T0Carrying out inbreeding and harvesting T on the generation plants TaVQ5-255 respectively1Seed generation and T cultivation1Seed generation to obtain T1And (5) plant generation.
Part T1The generation plants detect Cas9/gRNA/hptII according to the step 1, and the result isSee fig. 3.
According to the method of step 1, for each T1The generation plants are identified, and the results of all the identifications are shown in table 4.
TABLE 4
Note: the meanings of the symbols are as given in Table 1. 3i1 represents the homozygous mutation for strain i1 in 3, the heterozygous mutation for strain i1/wt in 10i1/wt in 10, and so on.
The results show that T0The homozygous strain with site-directed mutagenesis of the TaVQ5 can stably inherit T1Generation, T by strict selfing of Diallelic mutant lines of TaVQ5 edited at fixed points1The segregation situation conforms to Mendelian inheritance rule at T1No new types of variation were found in the passage lines. At T1Editing strains with target regions mutated and without carrying vector sequences can be obtained.
3. Off-target analysis of CRISPR/Cas9
According to online forecasting software (http://crispr.dbcls.jp/) Inputting a TaVQ5 gene sequence, selecting a Wheat (Triticum aestivum L.) genome, IWGSC1.0+ popseq (Nov,2014) library, and predicting the possible existing off-target sites of the gRNA, wherein the result shows that the selected gRNA does not predict the existence of the off-target sites.
Example 3 detection of Properties
First, material acquisition
Plant editing trial: TaVQ5-34, TaVQ5-74 and TaVQ5-255 obtained in example 2 were selfed to obtain T1Plant generation, selecting the T1Selfing the plant to obtain T2Seed generation, for each T following the procedure of example 22Identifying the plant generation from T2Selecting homozygous mutation type based on target sequence from generation plants, and selfing plant not carrying vector sequence (TaVQ5-34-2-9, TaVQ5-74-2-11, TaVQ5-74-2-19, TaVQ5-74-6-13, TaVQ5-74-8-3, TaVQ5-74-9-5, TaVQ5-255-4-7, TaVQ5-255-4-16) to obtain T3The generation seed is T3Substitute for non-carrier vector sequenceThe plant of (1). Will originate from T0T of generation plant TaVQ5-343The plant not carrying the carrier sequence is named as T3The generation TaVQ5-34 will originate from T0T of generation plant TaVQ5-743The plant not carrying the carrier sequence is named as T3The generation TaVQ5-74 will originate from T0T of generation plant TaVQ5-2553The plant not carrying the carrier sequence is named as T3To TaVQ 5-255. T is3TaVQ5-34, T substitute3TaVQ5-74, T substitute3The plant genotypes of the generations of TaVQ5-255 are shown in FIG. 4. By T3TaVQ5-34, T substitute3TaVQ5-74, T substitute3The TaVQ5-255 generation was used as a test editing plant for the next disease resistance identification.
Second, detection of character
The test plant is T3TaVQ5-34, T substitute3TaVQ5-74, T substitute3TaVQ5-255 substitute, Zheng wheat 7698 is used as wild control plant.
1. Wheat powdery mildew resistance assay
(1) Under field conditions, 50 test plants were normally grown per strain. Induced and control plants were planted simultaneously.
(2) When the tested plants grow to the jointing stage, the Erysiphe cichoracearum E09 is inoculated on the induced plant by sweeping.
(3) In the filling stage of wheat, the condition of the patient is recorded by adopting 0-9 grade standard investigation, the specific disease grade standard is shown in table 1, and the identification result is shown in table 5.
TABLE 5
Note: CK is wild type Zheng Mai 7698.
The identification result shows that wild type Zhengmai 7698 plant shows the powdery mildew, T3TaVQ5-34, T substitute3TaVQ5-74, T substitute3The plants of the generations of TaVQ5-255 all show the powdery mildew resistance, which indicates that the powdery mildew resistance of the wheat with the TaVQ5 gene knockout gene is improved to a certain level.
2. Wheat sheath blight resistance assay
(1) Under field conditions, 50 test plants were normally grown per strain. Control plants were planted simultaneously.
(2) And (3) inoculating rhizoctonia solani R0301 by adopting a toothpick inoculation method in the growth jointing stage of the tested plant.
(3) In the filling stage of wheat, 5 grades of disease grading standards are adopted for grading the disease, the disease index is calculated, specifically shown in table 2, and the identification result is shown in fig. 5.
The results show that the TaVQ5 gene knockout mutant T is compared with the wild type Zheng wheat 7698 plants3TaVQ5-34, T substitute3TaVQ5-74, T substitute3The resistance of the plants of the TaVQ5-255 generation to the wheat sharp eyespot is obviously improved, which shows that the ability of knocking out the TaVQ5 gene to the wheat sharp eyespot is improved to a certain level.
The present invention has been described in detail above. It will be apparent to those skilled in the art that the invention can be practiced in a wide range of equivalent parameters, concentrations, and conditions without departing from the spirit and scope of the invention and without undue experimentation. While the invention has been described with reference to specific embodiments, it will be appreciated that the invention can be further modified. In general, this application is intended to cover any variations, uses, or adaptations of the invention following, in general, the principles of the invention and including such departures from the present disclosure as come within known or customary practice within the art to which the invention pertains. The use of some of the essential features is possible within the scope of the claims attached below.
Sequence listing
<110> institute of crop science of Chinese academy of agricultural sciences
<120> method for improving disease resistance of wheat by inhibiting expression of TaVQ5 gene in wheat
<130> GNCSY201697
<160> 8
<170> SIPOSequenceListing 1.0
<210> 1
<211> 15756
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 1
gaattcgagc tcggtacccc tggcgaaagg gggatgtgct gcaaggcgat taagttgggt 60
aacgccaggg ttttcccagt cacgacgttg taaaacgacg gccagtgaat tcccgatcta 120
gtaacataga tgacaccgcg cgcgataatt tatcctagtt tgcgcgctat attttgtttt 180
ctatcgcgta ttaaatgtat aattgcggga ctctaatcat aaaaacccat ctcataaata 240
acgtcatgca ttacatgtta attattacat gcttaacgta attcaacaga aattatatga 300
taatcatcgc aagaccggca acaggattca atcttaagaa actttattgc caaatgtttg 360
aacgatcggg gaaattcgga tccccaatac ttcaatcgcc gccgagttgt gagaggtcga 420
tgcgtgtctc gtagaggcct gtgatagact ggtggatgag ggtggcgtcg agaacctcct 480
tggtagaggt gtagcgcttg cggtcgatgg tggtgtcgaa gtacttgaag gcggctggag 540
cgccgaggtt ggtgagggtg aagaggtgga tgatgttctc ggcctgctcg cgaattggct 600
tatcgcggtg cttgttgtag gcgctgagca ccttatcgag gttggcatcg gcgaggatca 660
cgcgcttgga gaactcggag atctgctcga tgatctcgtc gaggtagtgc ttgtgctgct 720
cgacgaacag ctgcttttgc tcgttgtcct ctggggagcc cttgagcttc tcgtagtggg 780
aggcgaggta gaggaagttc acgtacttgg acgggagagc aagctcgttg cccttctgaa 840
gctcgccagc agaggcgagc attctcttgc ggccgttctc aagctcgaag aggctgtact 900
tcgggagctt gatgatgagg tccttcttca cctccttgta gcccttggcc tcgaggaagt 960
cgattgggtt cttctcgaag ctgctgcgct ccatgatcgt gatgcccagc agctccttga 1020
cggacttgag cttcttgctc ttgcccttct cgaccttggc aaccacgagc acagagtagg 1080
ccacggtcgg agaatcgaag ccgccatact tcttcgggtc ccagtccttc ttgcgggcga 1140
tcagcttgtc ggagttgcgc tttgggagga tggactcctt ggagaagccg ccggtctgaa 1200
cctcggtctt cttcacgatg ttcacttgcg gcatggagag caccttgcgc actgtggcga 1260
aatccctgcc cttgtcccac acgatctcgc ctgtctcgcc gtttgtctcg atgagcggcc 1320
tcttcctaat ctcgccgttg gcgagcgtga tctcggtctt gaagaaattc atgatgttgg 1380
agtagaagaa gtacttggcg gtcgccttgc cgatctcttg ctcggacttg gcgatcatct 1440
tgcgcacgtc gtacaccttg tagtcgccgt acacgaactc ggactcgagc tttgggtact 1500
tcttgatgag ggctgtgccc accacggcat tgaggtaggc gtcgtgggcg tggtggtagt 1560
tgttgatctc gcgcaccttg tagaactgga agtccttgcg gaagtcggac acgagcttgg 1620
acttgagggt gatgaccttc acctcgcgga tgagcttgtc gttctcgtcg tacttggtgt 1680
tcatgcggga gtcgaggatc tgggccacgt gctttgtgat ctggcgtgtc tcgacgagct 1740
ggcgcttgat gaagccggcc ttatcaagct cggaaaggcc gcctctctcg gccttggtga 1800
ggttgtcgaa cttcctctgg gtgatgagct tggcgttgag gagctggcgc cagtagttct 1860
tcatcttctt gacgacctct tcggacggca cgttatcgga cttgcccctg ttcttgtcgg 1920
agcgggtgag caccttgttg tcgatggagt cgtccttcag gaaggactgc ggcacaatat 1980
ggtccacgtc gtagtcggag aggcggttga tgtccagctc ttggtccacg tacatgtcgc 2040
ggccgttctg gaggtagtag aggtagagct tctcgttctg gagctgggtg ttctcgactg 2100
ggtgctcctt gaggatctgg gagcccagct ccttaatgcc ctcctcgatc ctcttcatgc 2160
gctcgcggga gttcttttgg cccttctgtg tggtctggtt ctcgcgggcc atctcgatca 2220
cgatgttctc tggcttgtgc ctgcccatca ccttcaccag ctcgtccacc accttcacgg 2280
tctggagaat gcccttcttg atagccgggg agccggcgag attggcgata tgctcatgga 2340
gggaatcgcc ttggccggac acctgggcct tttggatgtc ctccttgaag gtgagggagt 2400
cgtcgtggat gagctgcatg aagttgcggt tggcgaagcc gtcggacttg aggaagtcga 2460
ggatcgtctt gccggactgc ttgtcgcgga tgccgttgat gagcttccta gagagcctgc 2520
cccagccggt atagcgcctg cgcttcagct gcttcatcac cttgtcgtcg aagaggtggg 2580
cgtatgtctt gaggcgctcc tcgatcatct cgcggtcctc gaagagggtg agggtgagca 2640
cgatgtcctc gaggatgtcc tcgttctcct cgttgtcgag gaagtccttg tccttgataa 2700
tcttgaggag gtcgtggtag gtcccgaggg aggcattgaa cctatcctcg acgccggaga 2760
tctcgacgga gtcgaagcac tcgattttct tgaagtagtc ctccttgagc tgcttcacgg 2820
tcaccttgcg gttggtcttg aacagcaggt cgacgatggc cttcttttgc tcgccgctaa 2880
ggaaagctgg cttcctcatc ccctcggtca cgtacttcac cttggtcagc tcgttgtaca 2940
cggtgaagta ctcgtagagg agtgagtgct tcgggagcac cttctcgttc gggaggttct 3000
tgtcgaagtt ggtcatgcgc tcgatgaaag actgggcaga ggcgccctta tccaccacct 3060
cctcgaagtt ccagggggtg attgtctcct cggactttct ggtcatccag gcgaacctgg 3120
agttgcccct ggcgagcggg cccacgtagt acgggatgcg gaaggtgagg atcttctcaa 3180
tcttctcgcg gttgtccttg aggaacgggt agaagtcctc ttgcctgcgg aggatagcat 3240
gaagctcgcc gaggtggatc tggtgcggga tggagccatt atcgaaggtg cgctgcttgc 3300
ggaggaggtc ctctctattg agcttcacga gcagctcctc ggtgccgtcc atcttctcga 3360
ggatcggctt gatgaacttg tagaactcct cttgagaagc gccgccatcg atgtagccgg 3420
cgtagccgtt cttggactgg tcgaagaaga tctccttgta cttctctggg agctgctgtc 3480
tcacgagggc cttgaggagt gtgaggtcct ggtggtgctc gtcgtacctc ttgatcatgg 3540
aggcggagag tggggccttg gtgatctcgg tgttcaccct gaggatgtcg ctgaggagga 3600
tggcgtcgga gagattcttg gcggcgagga acagatcggc gtactgatcg ccaatctggg 3660
cgaggagatt gtcgaggtcg tcgtcgtagg tgtccttgga aagctggagc ttggcgtcct 3720
cggcgaggtc gaagttggac ttgaagttcg gggtgaggcc aagagagagg gcgatcaggt 3780
tgccgaagag gccattcttc ttctcgcccg gaagttgggc gatcagattc tcgagcctgc 3840
gggacttaga gagcctggca gagagaatag ccttggcgtc aacgccagag gcgttgatcg 3900
ggttctcctc gaacagctgg ttgtaggtct gcacgagctg gatgaacagc ttgtccacat 3960
cggagttgtc cgggttgagg tcgccctcga tgaggaagtg gcccctgaac ttgatcatgt 4020
gggcgagggc gaggtagatg agcctgaggt cggccttatc ggtggagtcg acgagcttct 4080
tgcggaggtg gtagatggtc gggtacttct cgtggtaggc cacctcatcc acgatgttgc 4140
cgaagatcgg atggcgctcg tgcttcttgt cctcctcgac gaggaagctc tcctcgagcc 4200
tgtggaagaa gctgtcgtcc accttggcca tctcgttgga gaagatctct tggaggtagc 4260
agatgcggtt cttgcgcctg gtgtacctgc gtctagcggt cctcttgagc cttgtagcct 4320
cggctgtctc gccagagtcg aacagcaggg cgccgatgag attcttcttg atggagtggc 4380
ggtcggtgtt gccgaggacc ttgaacttct tggacggcac cttgtactcg tcggtgatca 4440
cggcccagcc aacagaattg gtgccgatgt cgaggccgat ggagtacttc ttgtcgacct 4500
tgcgcttctt ctttggggcc atagtattgg ggatcccccg ggctgcagaa gtaacaccaa 4560
acaacagggt gagcatcgac aaaagaaaca gtaccaagca aataaatagc gtatgaaggc 4620
agggctaaaa aaatccacat atagctgctg catatgccat catccaagta tatcaagatc 4680
aaaataatta taaaacatac ttgtttatta taatagatag gtactcaagg ttagagcata 4740
tgaatagatg ctgcatatgc catcatgtat atgcatcagt aaaacccaca tcaacatgta 4800
tacctatcct agatcgatat ttccatccat cttaaactcg taactatgaa gatgtatgac 4860
acacacatac agttccaaaa ttaataaata caccaggtag tttgaaacag tattctactc 4920
cgatctagaa cgaatgaacg accgcccaac cacaccacat catcacaacc aagcgaacaa 4980
aaagcatctc tgtatatgca tcagtaaaac ccgcatcaac atgtatacct atcctagatc 5040
gatatttcca tccatcatct tcaattcgta actatgaata tgtatggcac acacatacag 5100
atccaaaatt aataaatcca ccaggtagtt tgaaacagaa ttctactccg atctagaacg 5160
accgcccaac cagaccacat catcacaacc aagacaaaaa aaagcatgaa aagatgaccc 5220
gacaaacaag tgcacggcat atattgaaat aaaggaaaag ggcaaaccaa accctatgca 5280
acgaaacaaa aaaaatcatg aaatcgatcc cgtctgcgga acggctagag ccatcccagg 5340
attccccaaa gagaaacact ggcaagttag caatcagaac gtgtctgacg tacaggtcgc 5400
atccgtgtac gaacgctagc agcacggatc taacacaaac acggatctaa cacaaacatg 5460
aacagaagta gaactaccgg gccctaacca tggaccggaa cgccgatcta gagaaggtag 5520
agaggggggg ggggggagga cgagcggcgt accttgaagc ggaggtgccg acgggtggat 5580
ttgggggaga tctggttgtg tgtgtgtgcg ctccgaacaa cacgaggttg gggaaagagg 5640
gtgtggaggg ggtgtctatt tattacggcg ggcgaggaag ggaaagcgaa ggagcggtgg 5700
gaaaggaatc ccccgtagct gccgtgccgt gagaggagga ggaggccgcc tgccgtgccg 5760
gctcacgtct gccgctccgc cacgcatttc tggatgccga cagcggagca agtccaacgg 5820
tggagcggaa ctctcgagag gggtccagag gcagcgacag agatgccgtg ccgtctgctt 5880
cgcttggccc gacgcgacgc tgctggttcg ctggttggtg tccgttagac tcgtcgacgg 5940
cgtttaacag gctggcatta tctactcgaa acaagaaaaa tgtttcctta gtttttttaa 6000
tttcttaaag ggtatttgtt taatttttag tcactttatt ttattctatt ttatatctaa 6060
attattaaat aaaaaaacta aaatagagtt ttagttttct taatttagag gctaaaatag 6120
aataaaatag atgtactaaa aaaattagtc tataaaaacc attaacccta aaccctaaat 6180
ggatgtacta ataaaatgga tgaagtatta tataggtgaa gctatttgca aaaaaaaagg 6240
agaacacatg cacactaaaa agataaaact gtagagtcct gttgtcaaaa tactcaattg 6300
tcctttagac catgtctaac tgttcattta tatgattctc taaaacactg atattattgt 6360
agtactatag attatattat tcgtagagta aagtttaaat atatgtataa agatagataa 6420
actgcacttc aaacaagtgt gacaaaaaaa atatgtggta attttttata acttagacat 6480
gcaatgctca ttatctctag agaggggcac gaccgggtca cgctgcactg caggaattcg 6540
atatcaagct tgaccaagcc cgttattctg acagttctgg tgctcaacac atttatattt 6600
atcaaggagc acattgttac tcactgctag gagggaatcg aactaggaat attgatcaga 6660
ggaactacga gagagctgaa gataactgcc ctctagctct cactgatctg ggtcgcatag 6720
tgagatgcag cccacgtgag ttcagcaacg gtctagcgct gggcttttag gcccgcatga 6780
tcgggctttt gtcgggtggt cgacgtgttc acgattgggg agagcaacgc agcagttcct 6840
cttagtttag tcccacctcg cctgtccagc agagttctga ccggtttata aactcgcttg 6900
ctgcatcaga cttgcgccgt agatgcccgc ccaggtttta gagctagaaa tagcaagtta 6960
aaataaggct agtccgttat caacttgaaa aagtggcacc gagtcggtgc tttttttggt 7020
accctgcatg ggagaggcgg tttgcgtatt ggtttaaaca tagctaaact atcagtgttt 7080
gacaggatat attggcgggt aaacctaaga gaaaagagcg tttattagaa taacggatat 7140
ttaaaagggc gtgaaaaggt ttatccgttc gtccatttgt atgtgcatgc caaccacagg 7200
gttcccctcg ggatcaaagt actttgatcc aacccctccg ctgctatagt gcagtcggct 7260
tctgacgttc agtgcagccg tcttctgaaa acgacatgtc gcacaagtcc taagttacgc 7320
gacaggctgc cgccctgccc ttttcctggc gttttcttgt cgcgtgtttt agtcgcataa 7380
agtagaatac ttgcgactag aaccggagac attacgccat gaacaagagc gccgccgctg 7440
gcctgctggg ctatgcccgc gtcagcaccg acgaccagga cttgaccaac caacgggccg 7500
aactgcacgc ggccggctgc accaagctgt tttccgagaa gatcaccggc accaggcgcg 7560
accgcccgga gctggccagg atgcttgacc acctagccct ggcgacgttg tgacagtgac 7620
caggctagac cgcctggccc gcagcacccg cgacctactg gacattgccg agcgcatcca 7680
ggaggccggc gcgggcctgc gtagcctggc agagccgtgg gccgacacca ccacgccggc 7740
cggccgcatg gtgttgaccg tgttcgccgg cattgccgag ttcgagcgtt ccctaatcat 7800
cgaccgcacc cggagcgggc gcgaggccgc caaggcccga ggcgtgaagt ttggcccccg 7860
ccctaccctc accccggcac agatcgcgca cgcccgcgag ctgatcgacc aggaaggccg 7920
caccgtgaaa gaggcggctg cactgcttgg cgtgcatcgc tcgaccctgt accgcgcact 7980
tgagcgcagc gaggaagtga cgcccaccga ggccaggcgg cgcggtgcct tccgtgagga 8040
cgcattgacc gaggccgacg ccctggcggc cgccgagaat gaacgccaag aggaacaagc 8100
atgaaaccgc accaggacgg ccaggacgaa ccgtttttca ttaccgaaga gatcgaggcg 8160
gagatgatcg cggccgggta cgtgttcgag ccgcccgcgc acgtctcaac cgtgcggctg 8220
catgaaatcc tggccggttt gtctgatgcc aagctggcgg cctggccggc cagcttggcc 8280
gctgaagaaa ccgagcgccg ccgtctaaaa aggtgatgtg tatttgagta aaacagcttg 8340
cgtcatgcgg tcgctgcgta tatgatgcga tgagtaaata aacaaatacg caaggggaac 8400
gcatgaaggt tatcgctgta cttaaccaga aaggcgggtc aggcaagacg accatcgcaa 8460
cccatctagc ccgcgccctg caactcgccg gggccgatgt tctgttagtc gattccgatc 8520
cccagggcag tgcccgcgat tgggcggccg tgcgggaaga tcaaccgcta accgttgtcg 8580
gcatcgaccg cccgacgatt gaccgcgacg tgaaggccat cggccggcgc gacttcgtag 8640
tgatcgacgg agcgccccag gcggcggact tggctgtgtc cgcgatcaag gcagccgact 8700
tcgtgctgat tccggtgcag ccaagccctt acgacatatg ggcaaccgcc gacctggtgg 8760
agctggttaa gcagcgcatt gaggtcacgg atggaaggct acaagcggcc tttgtcgtgt 8820
cgcgggcgat caaaggcacg cgcatcggcg gtgaggttgc cgaggcgctg gccgggtacg 8880
agctgcccat tcttgagtcc cgtatcacgc agcgcgtgag ctacccaggc actgccgccg 8940
ccggcacaac cgttcttgaa tcagaacccg agggcgacgc tgcccgcgag gtccaggcgc 9000
tggccgctga aattaaatca aaactcattt gagttaatga ggtaaagaga aaatgagcaa 9060
aagcacaaac acgctaagtg ccggccgtcc gagcgcacgc agcagcaagg ctgcaacgtt 9120
ggccagcctg gcagacacgc cagccatgaa gcgggtcaac tttcagttgc cggcggagga 9180
tcacaccaag ctgaagatgt acgcggtacg ccaaggcaag accattaccg agctgctatc 9240
tgaatacatc gcgcagctac cagagtaaat gagcaaatga ataaatgagt agatgaattt 9300
tagcggctaa aggaggcggc atggaaaatc aagaacaacc aggcaccgac gccgtggaat 9360
gccccatgtg tggaggaacg ggcggttggc caggcgtaag cggctgggtt gtctgccggc 9420
cctgcaatgg cactggaacc cccaagcccg aggaatcggc gtgacggtcg caaaccatcc 9480
ggcccggtac aaatcggcgc ggcgctgggt gatgacctgg tggagaagtt gaaggccgcg 9540
caggccgccc agcggcaacg catcgaggca gaagcacgcc ccggtgaatc gtggcaagcg 9600
gccgctgatc gaatccgcaa agaatcccgg caaccgccgg cagccggtgc gccgtcgatt 9660
aggaagccgc ccaagggcga cgagcaacca gattttttcg ttccgatgct ctatgacgtg 9720
ggcacccgcg atagtcgcag catcatggac gtggccgttt tccgtctgtc gaagcgtgac 9780
cgacgagctg gcgaggtgat ccgctacgag cttccagacg ggcacgtaga ggtttccgca 9840
gggccggccg gcatggccag tgtgtgggat tacgacctgg tactgatggc ggtttcccat 9900
ctaaccgaat ccatgaaccg ataccgggaa gggaagggag acaagcccgg ccgcgtgttc 9960
cgtccacacg ttgcggacgt actcaagttc tgccggcgag ccgatggcgg aaagcagaaa 10020
gacgacctgg tagaaacctg cattcggtta aacaccacgc acgttgccat gcagcgtacg 10080
aagaaggcca agaacggccg cctggtgacg gtatccgagg gtgaagcctt gattagccgc 10140
tacaagatcg taaagagcga aaccgggcgg ccggagtaca tcgagatcga gctagctgat 10200
tggatgtacc gcgagatcac agaaggcaag aacccggacg tgctgacggt tcaccccgat 10260
tactttttga tcgatcccgg catcggccgt tttctctacc gcctggcacg ccgcgccgca 10320
ggcaaggcag aagccagatg gttgttcaag acgatctacg aacgcagtgg cagcgccgga 10380
gagttcaaga agttctgttt caccgtgcgc aagctgatcg ggtcaaatga cctgccggag 10440
tacgatttga aggaggaggc ggggcaggct ggcccgatcc tagtcatgcg ctaccgcaac 10500
ctgatcgagg gcgaagcatc cgccggttcc taatgtacgg agcagatgct agggcaaatt 10560
gccctagcag gggaaaaagg tcgaaaaggt ctctttcctg tggatagcac gtacattggg 10620
aacccaaagc cgtacattgg gaaccggaac ccgtacattg ggaacccaaa gccgtacatt 10680
gggaaccggt cacacatgta agtgactgat ataaaagaga aaaaaggcga tttttccgcc 10740
taaaactctt taaaacttat taaaactctt aaaacccgcc tggcctgtgc ataactgtct 10800
ggccagcgca cagccgaaga gctgcaaaaa gcgcctaccc ttcggtcgct gcgctcccta 10860
cgccccgccg cttcgcgtcg gcctatcgcg gccgctggcc gctcaaaaat ggctggccta 10920
cggccaggca atctaccagg gcgcggacaa gccgcgccgt cgccactcga ccgccggcgc 10980
ccacatcaag gcaccctgcc tcgcgcgttt cggtgatgac ggtgaaaacc tctgacacat 11040
gcagctcccg gagacggtca cagcttgtct gtaagcggat gccgggagca gacaagcccg 11100
tcagggcgcg tcagcgggtg ttggcgggtg tcggggcgca gccatgaccc agtcacgtag 11160
cgatagcgga gtgtatactg gcttaactat gcggcatcag agcagattgt actgagagtg 11220
caccatatgc ggtgtgaaat accgcacaga tgcgtaagga gaaaataccg catcaggcgc 11280
tcttccgctt cctcgctcac tgactcgctg cgctcggtcg ttcggctgcg gcgagcggta 11340
tcagctcact caaaggcggt aatacggtta tccacagaat caggggataa cgcaggaaag 11400
aacatgtgag caaaaggcca gcaaaaggcc aggaaccgta aaaaggccgc gttgctggcg 11460
tttttccata ggctccgccc ccctgacgag catcacaaaa atcgacgctc aagtcagagg 11520
tggcgaaacc cgacaggact ataaagatac caggcgtttc cccctggaag ctccctcgtg 11580
cgctctcctg ttccgaccct gccgcttacc ggatacctgt ccgcctttct cccttcggga 11640
agcgtggcgc tttctcatag ctcacgctgt aggtatctca gttcggtgta ggtcgttcgc 11700
tccaagctgg gctgtgtgca cgaacccccc gttcagcccg accgctgcgc cttatccggt 11760
aactatcgtc ttgagtccaa cccggtaaga cacgacttat cgccactggc agcagccact 11820
ggtaacagga ttagcagagc gaggtatgta ggcggtgcta cagagttctt gaagtggtgg 11880
cctaactacg gctacactag aaggacagta tttggtatct gcgctctgct gaagccagtt 11940
accttcggaa aaagagttgg tagctcttga tccggcaaac aaaccaccgc tggtagcggt 12000
ggtttttttg tttgcaagca gcagattacg cgcagaaaaa aaggatctca agaagatcct 12060
ttgatctttt ctacggggtc tgacgctcag tggaacgaaa actcacgtta agggattttg 12120
gtcatgcatt ctaggtacta aaacaattca tccagtaaaa tataatattt tattttctcc 12180
caatcaggct tgatccccag taagtcaaaa aatagctcga catactgttc ttccccgata 12240
tcctccctga tcgaccggac gcagaaggca atgtcatacc acttgtccgc cctgccgctt 12300
ctcccaagat caataaagcc acttactttg ccatctttca caaagatgtt gctgtctccc 12360
aggtcgccgt gggaaaagac aagttcctct tcgggctttt ccgtctttaa aaaatcatac 12420
agctcgcgcg gatctttaaa tggagtgtct tcttcccagt tttcgcaatc cacatcggcc 12480
agatcgttat tcagtaagta atccaattcg gctaagcggc tgtctaagct attcgtatag 12540
ggacaatccg atatgtcgat ggagtgaaag agcctgatgc actccgcata cagctcgata 12600
atcttttcag ggctttgttc atcttcatac tcttccgagc aaaggacgcc atcggcctca 12660
ctcatgagca gattgctcca gccatcatgc cgttcaaagt gcaggacctt tggaacaggc 12720
agctttcctt ccagccatag catcatgtcc ttttcccgtt caacatcata ggtggtccct 12780
ttataccggc tgtccgtcat ttttaaatat aggttttcat tttctcccac cagcttatat 12840
accttagcag gagacattcc ttccgtatct tttacgcagc ggtatttttc gatcagtttt 12900
ttcaattccg gtgatattct cattttagcc atttattatt tccttcctct tttctacagt 12960
atttaaagat accccaagaa gctaattata acaagacgaa ctccaattca ctgttccttg 13020
cattctaaaa ccttaaatac cagaaaacag ctttttcaaa gttgttttca aagttggcgt 13080
ataacatagt atcgacggag ccgattttga aaccgcggtg atcacaggca gcaacgctct 13140
gtcatcgtta caatcaacat gctaccctcc gcgagatcat ccgtgtttca aacccggcag 13200
cttagttgcc gttcttccga atagcatcgg taacatgagc aaagtctgcc gccttacaac 13260
ggctctcccg ctgacgccgt cccggactga tgggctgcct gtatcgagtg gtgattttgt 13320
gccgagctgc cggtcgggga gctgttggct ggctggtggc aggatatatt gtggtgtaaa 13380
caaattgacg cttagacaac ttaataacac attgcggacg tttttaatgt actgaattaa 13440
cgccgaatta attcggggga tctggatttt agtactggat tttggtttta ggaattagaa 13500
attttattga tagaagtatt ttacaaatac aaatacatac taagggtttc ttatatgctc 13560
aacacatgag cgaaacccta taggaaccct aattccctta tctgggaact actcacacat 13620
tattatggag aaactcgagc ttgtcgatcg acagatccgg tcggcatcta ctctatttct 13680
ttgccctcgg acgagtgctg gggcgtcggt ttccactatc ggcgagtact tctacacagc 13740
catcggtcca gacggccgcg cttctgcggg cgatttgtgt acgcccgaca gtcccggctc 13800
cggatcggac gattgcgtcg catcgaccct gcgcccaagc tgcatcatcg aaattgccgt 13860
caaccaagct ctgatagagt tggtcaagac caatgcggag catatacgcc cggagtcgtg 13920
gcgatcctgc aagctccgga tgcctccgct cgaagtagcg cgtctgctgc tccatacaag 13980
ccaaccacgg cctccagaag aagatgttgg cgacctcgta ttgggaatcc ccgaacatcg 14040
cctcgctcca gtcaatgacc gctgttatgc ggccattgtc cgtcaggaca ttgttggagc 14100
cgaaatccgc gtgcacgagg tgccggactt cggggcagtc ctcggcccaa agcatcagct 14160
catcgagagc ctgcgcgacg gacgcactga cggtgtcgtc catcacagtt tgccagtgat 14220
acacatgggg atcagcaatc gcgcatatga aatcacgcca tgtagtgtat tgaccgattc 14280
cttgcggtcc gaatgggccg aacccgctcg tctggctaag atcggccgca gcgatcgcat 14340
ccatagcctc cgcgaccggt tgtagaacag cgggcagttc ggtttcaggc aggtcttgca 14400
acgtgacacc ctgtgcacgg cgggagatgc aataggtcag gctctcgcta aactccccaa 14460
tgtcaagcac ttccggaatc gggagcgcgg ccgatgcaaa gtgccgataa acataacgat 14520
ctttgtagaa accatcggcg cagctattta cccgcaggac atatccacgc cctcctacat 14580
cgaagctgaa agcacgagat tcttcgccct ccgagagctg catcaggtcg gagacgctgt 14640
cgaacttttc gatcagaaac ttctcgacag acgtcgcggt gagttcaggc tttttcatat 14700
ctcattgccc cccggatctg cgaaagctcg agagagatag atttgtagag agagactggt 14760
gatttcagcg tgtcctctcc aaatgaaatg aacttcctta tatagaggaa ggtcttgcga 14820
aggatagtgg gattgtgcgt catcccttac gtcagtggag atatcacatc aatccacttg 14880
ctttgaagac gtggttggaa cgtcttcttt ttccacgatg ctcctcgtgg gtgggggtcc 14940
atctttggga ccactgtcgg cagaggcatc ttgaacgata gcctttcctt tatcgcaatg 15000
atggcatttg taggtgccac cttccttttc tactgtcctt ttgatgaagt gacagatagc 15060
tgggcaatgg aatccgagga ggtttcccga tattaccctt tgttgaaaag tctcaatagc 15120
cctttggtct tctgagactg tatctttgat attcttggag tagacgagag tgtcgtgctc 15180
caccatgtta tcacatcaat ccacttgctt tgaagacgtg gttggaacgt cttctttttc 15240
cacgatgctc ctcgtgggtg ggggtccatc tttgggacca ctgtcggcag aggcatcttg 15300
aacgatagcc tttcctttat cgcaatgatg gcatttgtag gtgccacctt ccttttctac 15360
tgtccttttg atgaagtgac agatagctgg gcaatggaat ccgaggaggt ttcccgatat 15420
taccctttgt tgaaaagtct caatagccct ttggtcttct gagactgtat ctttgatatt 15480
cttggagtag acgagagtgt cgtgctccac catgttggca agctgctcta gccaatacgc 15540
aaaccgcctc tccccgcgcg ttggccgatt cattaatgca gctggcacga caggtttccc 15600
gactggaaag cgggcagtga gcgcaacgca attaatgtga gttagctcac tcattaggca 15660
ccccaggctt tacactttat gcttccggct cgtatgttgt gtggaattgt gagcggataa 15720
caatttcaca caggaaacag ctatgaccat gattac 15756
<210> 2
<211> 666
<212> DNA
<213> wheat (Triticum aestivum)
<400> 2
atgggcgaca ccggcgcgaa catgggccac tgggcgggca tctacggcgt cggcggcaat 60
ggggccgcgg cggcggaggg cagcgtggtg acggtgtcga gcccgacgtc ggggggctcg 120
ggcggcggga gccccacgag gtcggcgccc ggggtcgagg ggggccgcgt cggcaagccg 180
gcgcggcgga ggtcccgcgc ctcgcggcgg gcgcccgtca cgctgctcaa caccgacacc 240
accaacttcc gcgccatggt gcagcagttc accggcatcc cctccggccc ctacggcccg 300
gccggcgcgg gcggcgggcc cgtgatcagc ttcggcgcgg gcggtggcga ctacggcctc 360
ggcggcggca tgccggtgcg cccgtcgccg agctcggccg tgatgtcgtt cgaccacctc 420
ggccaccacc gcccgtccgc cgccacgtcg tccctgcagc agcagcagca tcagcagagc 480
cagctgttcc ggccgcagca gcagcaacag tacgccgact acggcggcgg cggcgcggac 540
atgtcgttcc tgcacgggtt cgagtcgtcg gcggaggaca gactgctgct gcagagcata 600
caggcggcgc agatgctgcc ccggccggcc tccactaaca cccccaatgg ctacaacttc 660
ggatga 666
<210> 3
<211> 221
<212> PRT
<213> wheat (Triticum aestivum)
<400> 3
Met Gly Asp Thr Gly Ala Asn Met Gly His Trp Ala Gly Ile Tyr Gly
1 5 10 15
Val Gly Gly Asn Gly Ala Ala Ala Ala Glu Gly Ser Val Val Thr Val
20 25 30
Ser Ser Pro Thr Ser Gly Gly Ser Gly Gly Gly Ser Pro Thr Arg Ser
35 40 45
Ala Pro Gly Val Glu Gly Gly Arg Val Gly Lys Pro Ala Arg Arg Arg
50 55 60
Ser Arg Ala Ser Arg Arg Ala Pro Val Thr Leu Leu Asn Thr Asp Thr
65 70 75 80
Thr Asn Phe Arg Ala Met Val Gln Gln Phe Thr Gly Ile Pro Ser Gly
85 90 95
Pro Tyr Gly Pro Ala Gly Ala Gly Gly Gly Pro Val Ile Ser Phe Gly
100 105 110
Ala Gly Gly Gly Asp Tyr Gly Leu Gly Gly Gly Met Pro Val Arg Pro
115 120 125
Ser Pro Ser Ser Ala Val Met Ser Phe Asp His Leu Gly His His Arg
130 135 140
Pro Ser Ala Ala Thr Ser Ser Leu Gln Gln Gln Gln His Gln Gln Ser
145 150 155 160
Gln Leu Phe Arg Pro Gln Gln Gln Gln Gln Tyr Ala Asp Tyr Gly Gly
165 170 175
Gly Gly Ala Asp Met Ser Phe Leu His Gly Phe Glu Ser Ser Ala Glu
180 185 190
Asp Arg Leu Leu Leu Gln Ser Ile Gln Ala Ala Gln Met Leu Pro Arg
195 200 205
Pro Ala Ser Thr Asn Thr Pro Asn Gly Tyr Asn Phe Gly
210 215 220
<210> 4
<211> 681
<212> DNA
<213> wheat (Triticum aestivum)
<400> 4
atgggtgaca ccggcgcgaa catgggccac tgggcgggca tctacggcgt cggcggcaat 60
ggggccgcga cggccgaggg cagcgtggtg acggtgtcta gcccgacgtc cgggggctcg 120
ggcggcggga gccccacgag gtcggcgccc ggggtcgagg gaggccgcgt cggcaagccg 180
gcgcggcgga ggtcccgcgc gtcgcgccgg gcgcccgtca cgctgctcaa caccgacacc 240
accaacttcc gcgccatggt gcagcagttc accggcatcc cctccggccc ctacggcccg 300
gctggcgcgg gcggcgggcc cgtgatcagc ttcggcgcgg gcggcggcga ctacggcctc 360
ggcggcggca tgccggtgcg cccgtcgccg agctcggccg tgatgtcgtt cgaccacctc 420
ggccaccacc gcccgtccgc tgtcacctcg tccctgcagc agcagcagca gcagcagagc 480
cggctgttcc ggccgcagca gcagcagcag cagtacggcg actacggcgg catgcacgga 540
ggcggcggcg cggacatgtc gttcctgcac gggttcgagt cgtcggccga ggacaggctg 600
ctgctgcaga gcatccaggc ggcgcagatg ctgccccgcc cggcctccac taacaccccc 660
aatggctaca acttcggatg a 681
<210> 5
<211> 226
<212> PRT
<213> wheat (Triticum aestivum)
<400> 5
Met Gly Asp Thr Gly Ala Asn Met Gly His Trp Ala Gly Ile Tyr Gly
1 5 10 15
Val Gly Gly Asn Gly Ala Ala Thr Ala Glu Gly Ser Val Val Thr Val
20 25 30
Ser Ser Pro Thr Ser Gly Gly Ser Gly Gly Gly Ser Pro Thr Arg Ser
35 40 45
Ala Pro Gly Val Glu Gly Gly Arg Val Gly Lys Pro Ala Arg Arg Arg
50 55 60
Ser Arg Ala Ser Arg Arg Ala Pro Val Thr Leu Leu Asn Thr Asp Thr
65 70 75 80
Thr Asn Phe Arg Ala Met Val Gln Gln Phe Thr Gly Ile Pro Ser Gly
85 90 95
Pro Tyr Gly Pro Ala Gly Ala Gly Gly Gly Pro Val Ile Ser Phe Gly
100 105 110
Ala Gly Gly Gly Asp Tyr Gly Leu Gly Gly Gly Met Pro Val Arg Pro
115 120 125
Ser Pro Ser Ser Ala Val Met Ser Phe Asp His Leu Gly His His Arg
130 135 140
Pro Ser Ala Val Thr Ser Ser Leu Gln Gln Gln Gln Gln Gln Gln Ser
145 150 155 160
Arg Leu Phe Arg Pro Gln Gln Gln Gln Gln Gln Tyr Gly Asp Tyr Gly
165 170 175
Gly Met His Gly Gly Gly Gly Ala Asp Met Ser Phe Leu His Gly Phe
180 185 190
Glu Ser Ser Ala Glu Asp Arg Leu Leu Leu Gln Ser Ile Gln Ala Ala
195 200 205
Gln Met Leu Pro Arg Pro Ala Ser Thr Asn Thr Pro Asn Gly Tyr Asn
210 215 220
Phe Gly
225
<210> 6
<211> 675
<212> DNA
<213> wheat (Triticum aestivum)
<400> 6
atgggcgaca ccggcgcgaa catgggccac tgggcgggca tctacggcgt cggcggcaat 60
ggggccgcgg cggcggaggg cagcgtggtg acggtgtcga gcccgacgtc cgggggctca 120
ggcggcggga gccccatgag gtcggcgccc ggggtcgagg ggggccgcgt cggcaagccg 180
gcgcggcgaa ggtcccgcgc ctcgcgccgg gcgcccgtca cgctgctcaa caccgacacc 240
accaactttc gcgccatggt gcagcagttc accggcatcc cctccggccc ctacggcccg 300
gccggcgcgg gcggcgggcc cgtgatcagc ttcggcgcgg gcggcggcga ctacggcctc 360
ggcggcggca tgccggtgcg cccgtcgccg acctcggccg tgatgtcgtt cgaccacctc 420
ggccaccacc gcccgtccgc cgccacgtcg tccctgcagc agcagcagca gagccagctc 480
ttccggccgc agcagcagca gcagtacggc gactacggcg gcatgcacgc cgggggcggc 540
ggcgcggaca tgtcgttcct gcacgggttc gagtcgtcgg cggaggacag gctgctgctg 600
cagagcatac aggcggcgca gatgctgccc cggccggcct ccactaacac ccccaatggc 660
tacaacttcg gatga 675
<210> 7
<211> 224
<212> PRT
<213> wheat (Triticum aestivum)
<400> 7
Met Gly Asp Thr Gly Ala Asn Met Gly His Trp Ala Gly Ile Tyr Gly
1 5 10 15
Val Gly Gly Asn Gly Ala Ala Ala Ala Glu Gly Ser Val Val Thr Val
20 25 30
Ser Ser Pro Thr Ser Gly Gly Ser Gly Gly Gly Ser Pro Met Arg Ser
35 40 45
Ala Pro Gly Val Glu Gly Gly Arg Val Gly Lys Pro Ala Arg Arg Arg
50 55 60
Ser Arg Ala Ser Arg Arg Ala Pro Val Thr Leu Leu Asn Thr Asp Thr
65 70 75 80
Thr Asn Phe Arg Ala Met Val Gln Gln Phe Thr Gly Ile Pro Ser Gly
85 90 95
Pro Tyr Gly Pro Ala Gly Ala Gly Gly Gly Pro Val Ile Ser Phe Gly
100 105 110
Ala Gly Gly Gly Asp Tyr Gly Leu Gly Gly Gly Met Pro Val Arg Pro
115 120 125
Ser Pro Thr Ser Ala Val Met Ser Phe Asp His Leu Gly His His Arg
130 135 140
Pro Ser Ala Ala Thr Ser Ser Leu Gln Gln Gln Gln Gln Ser Gln Leu
145 150 155 160
Phe Arg Pro Gln Gln Gln Gln Gln Tyr Gly Asp Tyr Gly Gly Met His
165 170 175
Ala Gly Gly Gly Gly Ala Asp Met Ser Phe Leu His Gly Phe Glu Ser
180 185 190
Ser Ala Glu Asp Arg Leu Leu Leu Gln Ser Ile Gln Ala Ala Gln Met
195 200 205
Leu Pro Arg Pro Ala Ser Thr Asn Thr Pro Asn Gly Tyr Asn Phe Gly
210 215 220
<210> 8
<211> 20
<212> DNA
<213> wheat (Triticum aestivum)
<400> 8
Claims (7)
1. A method for improving disease resistance of wheat is characterized by comprising the following steps: inhibiting receptor in wheatTaVQ5Expressing the gene to obtain target wheat with disease resistance higher than that of the receptor wheat; the disease resistance is resistance to powdery mildew and/or banded sclerotial blight; the above-mentionedTaVQ5The gene is a gene for coding TaVQ5 protein; the TaVQ5 protein is the protein of A1) or A2) as follows:
A1) the amino acid sequence is the protein of the amino acid sequence shown in any one of sequence 3, sequence 5 or sequence 7 in the sequence table;
A2) a1) at the N-terminus or/and C-terminus.
2. The method of claim 1, wherein: the above-mentionedTaVQ5The genes are the genes shown as E1 or E2:
e1, the coding sequence of the coding chain is a DNA molecule of any one of sequence 2, sequence 4 and sequence 6 in the sequence table;
e2, the nucleotide sequence is any one DNA molecule of sequence 2, sequence 4 and sequence 6 in the sequence table.
3. The method of claim 2, wherein: said inhibiting recipient wheatTaVQ5The gene expression is carried out in wheatTaVQ5Gene editing is realized.
4. The method of claim 3, wherein: the gene editing is carried out by using a CRISPR/Cas9 system; the CRISPR/Cas9 system comprises a plasmid for expressing sgRNA, wherein the target sequence of the sgRNA is the 1 st-20 th site of the sequence 8 in the sequence table, and the coding DNA of the sgRNA is the 6915 th-7017 th site of the sequence 1 in the sequence table.
5. The method of claim 4, wherein: the target wheat is the wheat which meets the following conditions: one or two or three of the A, B and D genomes are mutated at the target region.
The application of TaVQ5 protein in preparing a reagent for resisting powdery mildew and/or banded sclerotial blight, which is characterized in that: the active ingredient of the agent is a substance that inhibits the expression of a gene encoding the TaVQ5 protein of claim 1, reduces the abundance of the TaVQ5 protein, and/or knockouts the gene encoding the TaVQ5 protein.
7. The use of claim 6, wherein: the substance contains the following F1), F2) or F3):
F1) sgRNA, siRNA, shRNA, miRNA or antisense RNA targeting the gene;
F2) generating a DNA molecule that targets a sgRNA of the gene, a DNA molecule that generates an siRNA that targets the gene, a DNA molecule that generates an shRNA that targets the gene, a DNA molecule that generates an miRNA that targets the gene, or a DNA molecule that generates an antisense RNA that targets the gene;
F3) an expression vector that produces sgRNA targeting the gene, an expression vector that produces siRNA targeting the gene, an expression vector that produces shRNA targeting the gene, an expression vector that produces miRNA targeting the gene, or an expression vector that produces antisense RNA targeting the gene.
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CN1280415C (en) * | 2004-12-02 | 2006-10-18 | 河南农业大学 | Wheat disease-resistant gene Lr-L1 and its use |
US10988775B2 (en) * | 2015-07-17 | 2021-04-27 | Institute Of Genetics And Developmental Biology Chinese Academy Of Sciences | Wheat plants resistant to powdery mildew |
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