CN111778253B - Small interfering nucleic acid, composition and application - Google Patents

Small interfering nucleic acid, composition and application Download PDF

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CN111778253B
CN111778253B CN202010746194.5A CN202010746194A CN111778253B CN 111778253 B CN111778253 B CN 111778253B CN 202010746194 A CN202010746194 A CN 202010746194A CN 111778253 B CN111778253 B CN 111778253B
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胡荣宽
张紫楠
李琴
董长贵
张佩琢
杜永华
杜宏
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Suzhou Genepharma Co ltd
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Abstract

The invention discloses a small interfering RNA, a composition and an application thereof. The invention claims a siRNA, wherein the siRNA is SP-2013, part of nucleotides of a sense strand are 2' -O-methyl ribonucleotides, and part of phosphate groups are phosphorothioate groups. The invention provides novel siRNA and a composition thereof, which can effectively prevent and/or treat novel coronavirus.

Description

Small interfering nucleic acid, composition and application
The invention relates to a small interfering RNA, a composition and a divisional application of the application, wherein the application date is 4/3/2020, the application number is 202010256867.9, and the name of the invention is small interfering RNA.
Technical Field
The invention relates to the technical field of biological medicines, in particular to a small interfering RNA for inhibiting the expression of a novel coronavirus gene and application of the small interfering RNA in preparing a pharmaceutical composition for preventing and/or treating novel coronavirus pneumonia.
Background
At the end of 2019 and early 2020, a novel coronavirus pneumonia (coronas disease2019, COVID-19) is an acute infectious pneumonia, and researchers found that its pathogen is caused by a novel beta coronavirus that was not previously found in humans, which was subsequently named COVID-19 by the World Health Organization (WHO). Patients with COVID-19 mostly have the initial symptoms of fever, hypodynamia and dry cough, and gradually have severe manifestations such as dyspnea and the like. The prognosis is good in most patients and acute respiratory distress syndrome and septic shock can occur in some severe cases and even death. By 1/3 of 2020, COVID-19 has infected 88000 people, causing nearly 3000 deaths. Scientists and clinicians around the world are working rapidly to combat the respiratory disease covi-19 caused by the new coronavirus, but there is still a lack of effective antiviral drugs against the covi-19 virus, and current treatments are mainly isolation treatment and symptomatic support treatment. Therefore, the development of siRNA and pharmaceutical products thereof effective in preventing and/or treating novel coronavirus pneumonia is an urgent problem to be solved.
Disclosure of Invention
The invention aims to provide siRNA targeting a novel coronavirus gene and application thereof in preparation of a novel coronavirus pneumonia medicament.
The invention provides siRNA, which comprises a sense strand and an antisense strand, wherein the sense strand comprises a nucleotide sequence shown as SEQ ID NO: 2, and the antisense strand contains a nucleotide sequence shown as SEQ ID NO: 3; alternatively, the sense strand comprises the sequence set forth as SEQ ID NO: 28, and the antisense strand contains the nucleotide sequence shown as SEQ ID NO: 29; alternatively, the sense strand comprises the sequence set forth as SEQ ID NO: 40, and the antisense strand contains a nucleotide sequence shown as SEQ ID NO: 41; alternatively, the sense strand comprises the sequence set forth as SEQ ID NO: 42, and the antisense strand comprises the nucleotide sequence shown as SEQ ID NO: 43; alternatively, the sense strand comprises the sequence set forth as SEQ ID NO: 52, and the antisense strand comprises the nucleotide sequence shown as SEQ ID NO: 53; alternatively, the sense strand comprises the sequence set forth as SEQ ID NO: 54, and the antisense strand comprises the nucleotide sequence shown as SEQ ID NO: 55; alternatively, the sense strand comprises the sequence set forth as SEQ ID NO: 62, and the antisense strand comprises the nucleotide sequence shown as SEQ ID NO: 63; alternatively, the sense strand comprises the sequence set forth as SEQ ID NO: 64, and the antisense strand comprises the nucleotide sequence shown as SEQ ID NO: 65; alternatively, the sense strand comprises the sequence set forth as SEQ ID NO: 66, and the antisense strand comprises the nucleotide sequence shown as SEQ ID NO: 67; alternatively, the sense strand comprises the sequence set forth as SEQ ID NO: 68, and the antisense strand comprises the nucleotide sequence shown as SEQ ID NO: 69; alternatively, the sense strand comprises the sequence set forth as SEQ ID NO: 84, and the antisense strand comprises the nucleotide sequence shown as SEQ ID NO: 85; alternatively, the sense strand comprises the sequence set forth as SEQ ID NO: 92, and the antisense strand comprises the nucleotide sequence shown as SEQ ID NO: 93; alternatively, the sense strand comprises the sequence set forth as SEQ ID NO: 94, and the antisense strand comprises the nucleotide sequence shown in SEQ ID NO: 95;
wherein the content of the first and second substances,
sense strand 5'-CAUCUGAUUUGGCUACUAACA-3' (SEQ ID NO: 2),
antisense strand 5'-UUAGUAGCCAAAUCAGAUGUG-3' (SEQ ID NO: 3);
sense strand 5'-UCUGCAAUUAACAGGCCACAA-3' (SEQ ID NO: 28),
antisense strand 5'-GUGGCCUGUUAAUUGCAGAUG-3' (SEQ ID NO: 29);
sense strand 5'-AAACAAGCUAGUCUUAAUGGA-3' (SEQ ID NO: 40),
antisense strand 5'-CAUUAAGACUAGCUUGUUUGG-3' (SEQ ID NO: 41);
sense strand 5'-GUUGAUGGUGUUGUCCAACAA-3' (SEQ ID NO: 42),
antisense strand 5'-GUUGGACAACACCAUCAACUU-3' (SEQ ID NO: 43);
sense strand 5'-CUAGUCUCUAGUCAGUGUGUU-3' (SEQ ID NO: 52),
antisense strand 5'-CACACUGACUAGAGACUAGUG-3' (SEQ ID NO: 53);
sense strand 5'-AAUGUUACUUGGUUCCAUGCU-3' (SEQ ID NO: 54),
antisense strand 5'-CAUGGAACCAAGUAACAUUGG-3' (SEQ ID NO: 55);
sense strand 5'-CUAGUUAUCAGACUCAGACUA-3' (SEQ ID NO: 62),
antisense strand 5'-GUCUGAGUCUGAUAACUAGCG-3' (SEQ ID NO: 63);
sense strand 5'-CAAGCUUUAAACACGCUUGUU-3' (SEQ ID NO: 64),
antisense strand 5'-CAAGCGUGUUUAAAGCUUGUG-3' (SEQ ID NO: 65);
sense strand 5'-UCAUGGUGUAGUCUUCUUGCA-3' (SEQ ID NO: 66),
antisense strand 5'-CAAGAAGACUACACCAUGAGG-3' (SEQ ID NO: 67);
sense strand 5'-GCCUCAAUGAGGUUGCCAAGA-3' (SEQ ID NO: 68),
antisense strand 5'-UUGGCAACCUCAUUGAGGCGG-3' (SEQ ID NO: 69);
sense strand 5'-CUUACAUGGAUUUGUCUUCUA-3' (SEQ ID NO: 84),
antisense strand 5'-GAAGACAAAUCCAUGUAAGGA-3' (SEQ ID NO: 85);
sense strand 5'-AGGCGUUCCAAUUAACACCAA-3' (SEQ ID NO: 92),
antisense strand 5'-GGUGUUAAUUGGAACGCCUUG-3' (SEQ ID NO: 93);
sense strand 5'-UGACCAAAUUGGCUACUACCG-3' (SEQ ID NO: 94),
antisense strand 5'-GUAGUAGCCAAUUUGGUCAUC-3' (SEQ ID NO: 95).
Preferably, at least one single strand of the sense strand and the antisense strand of the siRNA is deleted or added with one or several nucleotides, thereby obtaining an siRNA derivative having the same function as the siRNA.
Preferably, at least a portion of the phosphate-sugar backbone of at least one single strand of said sense strand and said antisense strand of said siRNA is a phosphorothioate backbone;
or, at least a portion of the nucleotides of at least one single strand of the sense strand and the antisense strand are substituted or modified with nucleotides;
alternatively, at least one single strand of the sense strand and the antisense strand is linked to a signaling molecule and/or an active molecule and/or a functional group.
Preferably, at least a portion of the phosphate-sugar backbone of at least one single strand of said sense strand and said antisense strand of said siRNA is a phosphorothioate backbone;
or, at least a portion of the nucleotides of at least one single strand of the sense strand and the antisense strand are substituted or modified with nucleotides;
alternatively, at least one single strand of the sense strand and the antisense strand is linked to a signaling molecule and/or an active molecule and/or a functional group.
Preferably, the sense strand of the siRNA is SEQ ID NO: 2, the 1 st, 2 nd, 3 rd, 19 th, 20 th and 21 th nucleotides of the nucleotide sequence are all 2' -O-methyl ribonucleotides;
alternatively, the sense strand of the siRNA SEQ ID NO: the 1 st, 2 nd, 3 rd, 19 th, 20 th and 21 th nucleotides of the 28 th nucleotide sequence are all 2' -O-methyl ribonucleotides;
alternatively, the sense strand of the siRNA SEQ ID NO: the 1 st, 2 nd, 3 rd, 19 th, 20 th and 21 th nucleotides of the 40 th nucleotide sequence are all 2' -O-methyl ribonucleotides;
alternatively, the sense strand of the siRNA SEQ ID NO: the 1 st, 2 nd, 3 rd, 19 th, 20 th and 21 st nucleotides of the 52 nd nucleotide sequence are all 2' -O-methyl ribonucleotides;
alternatively, the sense strand of the siRNA SEQ ID NO: the 1 st, 2 nd, 3 rd, 19 th, 20 th and 21 th nucleotides of the 54 th nucleotide sequence are all 2' -O-methyl ribonucleotides;
alternatively, the sense strand of the siRNA SEQ ID NO: the 1 st, 2 nd, 3 rd, 19 th, 20 th and 21 th nucleotides of the 62 nucleotide sequence are all 2' -O-methyl ribonucleotides;
alternatively, the sense strand of the siRNA SEQ ID NO: the 1 st, 2 nd, 3 rd, 19 th, 20 th and 21 st nucleotides of the 64 th nucleotide sequence are all 2' -O-methyl ribonucleotides;
alternatively, the sense strand of the siRNA SEQ ID NO: the 1 st, 2 nd, 3 rd, 19 th, 20 th and 21 st nucleotides of the 66 nd nucleotide sequence are all 2' -O-methyl ribonucleotides;
alternatively, the sense strand of the siRNA SEQ ID NO: the 1 st, 2 nd, 3 rd, 19 th, 20 th and 21 th nucleotides of the 68 th nucleotide sequence are all 2' -O-methyl ribonucleotides;
alternatively, the sense strand of the siRNA SEQ ID NO: the 1 st, 2 nd, 3 rd, 19 th, 20 th and 21 th nucleotides of the 84 nucleotide sequence are all 2' -O-methyl ribonucleotides;
alternatively, the sense strand of the siRNA SEQ ID NO: the 1 st, 2 nd, 3 rd, 19 th, 20 th and 21 st nucleotides of the 92 nd nucleotide sequence are all 2' -O-methyl ribonucleotides;
alternatively, the sense strand of the siRNA SEQ ID NO: the 1 st, 2 nd, 3 rd, 19 th, 20 th and 21 st nucleotides of the 94 nucleotide sequence are all 2' -O-methyl ribonucleotides.
Preferably, the phosphate groups between the 1 st, 2 nd and 3 rd nucleotides and the phosphate groups between the 19 th, 20 th and 21 st nucleotides of the nucleotide sequence of the sense strand of the siRNA are all phosphorothioate groups.
Preferably, cholesterol is linked to the 5' -end of the sense strand of the siRNA.
The invention also provides application of the siRNA in preparation of a medicament for preventing and/or treating viral pneumonia.
Preferably, the viral pneumonia is novel coronavirus pneumonia COVID-19.
The invention also provides a kit, which comprises the siRNA and has the function of treating the novel coronavirus COVID-19.
Experiments prove that the siRNA modified by the invention has obvious inhibition effect on the novel coronavirus gene, lays a foundation for clinically treating the novel coronavirus pneumonia, and has great clinical significance and popularization value.
Drawings
FIG. 1 is a map of the dual luciferase reporter plasmid GP-mirGlo plasmid in example 3 of the present invention;
FIG. 2 is a graph showing the results of a dose-dependent experiment using siRNA numbered SP-26 in example 5 of the present invention;
FIG. 3 is a graph showing the results of a dose-dependent experiment using siRNA numbered SP-3552 in example 5 of the present invention;
FIG. 4 is a graph showing the results of a dose-dependent experiment using siRNA numbered SP-2013 in example 5 of the present invention;
FIG. 5 is a graph showing the results of a dose-dependent experiment using siRNA numbered SP-3169 in example 5 of the present invention;
FIG. 6 is a graph showing the results of a dose-dependent experiment using siRNA numbered SP-2867 in example 5 of the present invention;
FIG. 7 is a graph showing the results of a dose-dependent experiment using siRNA numbered SP-179 in example 5 of the present invention.
Detailed Description
The experimental procedures used in the following examples are all conventional procedures unless otherwise specified.
Materials, reagents and the like used in the following examples are commercially available unless otherwise specified.
The following non-limiting examples will allow those skilled in the art to better understand the present invention.
Any person skilled in the art can substitute or change the technical scheme and concept of the present invention within the careless scope of the present invention.
The 293T cell line used in the examples below was purchased from the classical collection of cells of the Central institute of technology.
Example 1
Synthesis of Small interfering nucleic acids
A novel coronavirus (COVID-19) genome (Genebank accession number; MN908947.3) (SEQ ID NO: 1) with a relatively conserved sequence was selected as a template. Respectively aiming at the conserved regions of the COVID-19 gene, a nucleotide sequence of 21bp is selected to design small interfering nucleic acid (siRNA).
The siRNA designed in this example was synthesized by shanghai gimar pharmaceutical technology ltd, and the sequences of the synthesized siRNA are shown in table 1.
TABLE 1
Figure BDA0002608433190000051
Figure BDA0002608433190000061
Figure BDA0002608433190000071
Figure BDA0002608433190000081
Figure BDA0002608433190000091
As shown in table 1, this example also sets up the sense strand nucleotide sequence as set forth in SEQ ID NO: 102, and the nucleotide sequence of the antisense strand is shown as SEQ ID NO: 103, M-siNC as a negative control, which is an unrelated sequence having no target site corresponding to the novel coronavirus (COVID-19) gene.
Example 2
Synthesis of modified Small interfering nucleic acids
The modified siRNA shown in the table 2 is obtained by chemically modifying the sense strand of the sequence in the table 1, namely, the 2' hydroxyl group of the pentose group in the nucleotide residues of the 1 st, 2 nd, 3 rd, 19 th, 20 th and 21 st bases of the sense strand is modified by methoxy, the phosphate group between the 1 st, 2 nd and 3 rd bases of the sense strand is phosphorothioate group, and the phosphate group between the 19 th, 20 th and 21 st bases of the sense strand is phosphorothioate group; the antisense strand is not modified, the siRNA designed in this example is synthesized by shanghai gimar pharmaceutical technology ltd, and cholesterol is linked to the 5' end of the sense strand of the siRNA for modification.
TABLE 2
Figure BDA0002608433190000101
Figure BDA0002608433190000111
Figure BDA0002608433190000121
Figure BDA0002608433190000131
Figure BDA0002608433190000141
Wherein m represents a 2' -methoxy group as a pentose group in the nucleotide residue on the left side, and s represents a phosphorothioate group between deoxyribonucleotide residues on the left and right sides thereof.
Example 3
Construction of dual-luciferase reporter plasmid
The dual-luciferase reporter plasmid GP-miRGLO vector used in this example (the sequence of this empty vector is shown in the specification), purchased from promega (cat. No. E1330), and the map information is shown in FIG. 1. A dual-luciferase reporter plasmid as shown in Table 3 was prepared by inserting a novel coronavirus (COVID-19) genome sequence into the GP-mirGAL vector.
TABLE 3
Figure BDA0002608433190000142
Figure BDA0002608433190000151
Example 4
Cell transfection
1.293T cells were cultured in 10cm dishes to 80-90% confluency, the culture broth was decanted and the cells were washed twice with 2ml PBS.
2. Adding 2ml of Trypsin-EDTAsolution, mixing uniformly, and standing at 37 ℃ for 1 minute.
3. The pancreatin solution was carefully aspirated, 2ml of DMEM medium containing 10% FBS was added, and the cells were pipetted to form a single cell suspension.
4. Counting with a hemocytometer, diluting the cells to 1X 106Cells/ml. By 5X 105Inoculating 12-well plate with cell/well concentration, mixing well at 37 deg.C with 5% CO2The culture was carried out for 24 hours.
5. Each 1OD260120 μ l DEPC-H for siRNA2O dissolved to a final concentration of about 20. mu.M.
6. Adding 100 μ l serum-free DMEM into 1.5ml EP tube, adding 7ul siRNA, adding 1.2ug of corresponding dual-fluorescence report carrier, and mixing; another 1.5ml EP tube was added with 100. mu.l serum-free DMEM, 4. mu.l Lipofectamine2000, mixed well, left at room temperature for 5 minutes, then mixed and left at room temperature for 20 minutes.
Grouping was performed according to the correspondence between plasmids and siRNA, and the specific correspondence is shown in Table 2.
Each group was done 3 more wells, averaged, and tested at time point 24/48h, once.
The culture medium was aspirated from the 12-well plate, and the transfection mixture was added dropwise to the 12-well plate, mixed well, and incubated in an incubator for 5 hours.
7. The transfection solution was aspirated off, and 500ul of DMEM medium containing 10% FBS was added. 5% CO at 37 ℃2The culture was continued for 24 and 48 hours, and the samples were collected.
Dual luciferase systemic detection
The Dual-Luciferase assay was performed using the Dual-Luciferase reporter assay kit (promega) (see instructions for specific methods of use).
Preparation of reagents:
1. preparation of passive lysis buffer 1 × PLB: 1 volume of 5XpassiveLysis buffer (PLB) was added to 4 volumes of distilled water. And (4) uniformly mixing. Storing at 4 ℃ for later use.
2. LAR II, dissolving the freeze-dried powder of LuciferaseAssaySubstrate by LuciferaseAssayBuffer II. Store at-20 ℃ until use.
3. Preparation of
Figure BDA0002608433190000161
Reagent (prepared as used): according to the required dosage of the experiment, a certain amount of the medicine is taken
Figure BDA0002608433190000162
Added in corresponding amount
Figure BDA0002608433190000163
In the preparation, the final concentration of the seed is 1 Xconcentration for standby.
A detection step:
1. the culture medium in the 12-well plate was decanted and the cells were washed twice with 500ul PBS.
2. 1 XPLB 300ul was added to the culture wells. Passive lysis of cells: the plate was gently shaken at room temperature for 15 minutes and the lysate was transferred to the assay plate. 100ul per well, 3 wells per experimental design.
3. Turning on a TecanM1000 microplate reader, preheating and selecting a dual-luciferase detection system.
4. Add 10ul LARII reagent to each well, select 1-2 seconds delay, read 5-10, detect firefly luciferase activity on the microplate reader.
5. The test plate is removed and added to each well
Figure BDA0002608433190000164
Reagent, selecting 1-2 seconds delay, reading 5-10, detecting renilla luciferase activity on an enzyme labeling instrument.
6. And (5) counting and analyzing results.
The results of the dual luciferase assay are shown in Table 4,
TABLE 4
Figure BDA0002608433190000165
Figure BDA0002608433190000171
The results show that the siRNAs with the numbers of PP-1758, PP-17660, PP-20091, PP-20163, SP-26, SP-179, SP-2013, SP-2867, SP-3169, SP-3552, MG-83, NP-208 and NP-241 can effectively inhibit the expression of the novel coronavirus genes.
Example 5
Six siRNAs with numbers SP-26, SP-179, SP-2013, SP-2867, SP-3552 and SP-3169 and with better inhibitory effect on the S region of the novel coronavirus gene are selected to carry out concentration-dependent experiments, cell transfection methods and dual-luciferase systematic detection methods, which are shown in example 4, and the concentration ranges of the siRNAs used are 0nmol/L, 0.01nmol/L, 0.1nmol/L, 1nmol/L, 10nmol/L and 100 nmol/L. The results of the dual-luciferase assay are shown in fig. 2-7, and the results show that the concentration of siRNA has a great influence on the inhibition of the expression of the novel coronavirus gene, and the higher the concentration is, the better the inhibition effect is.
The present invention has been described in detail above. It will be apparent to those skilled in the art that the invention can be practiced in a wide range of equivalent parameters, concentrations, and conditions without departing from the spirit and scope of the invention and without undue experimentation. While the invention has been described with reference to specific embodiments, it will be appreciated that the invention can be further modified. In general, the invention is intended to encompass any variations, uses, or adaptations of the invention following, in general, the principles of the invention, including such departures from the present disclosure as come within known or customary practice within the art to which the invention pertains.
Sequence listing
<110> Suzhou Jima Gene GmbH
<120> small interfering RNA, composition and application
<160> 172
<170> SIPOSequenceListing 1.0
<210> 104
<211> 714
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 104
ctcgagaaag ccttgaattt aggtgaaaca tttgtcacgc actcaaaggg attgtacaga 60
aagtgtgtta aatccagaga agaaactggc ctactcatgc ctctaaaagc cccaaaagaa 120
attatcttct tagagggaga aacacttccc acagaagtgt taacagagga agttgtcttg 180
aaaactggtg atttacaacc attagaacaa cctactagtg aagctgttga agctccattg 240
gttggtacac cagtttgtat taacgggctt atgttgctcg aaatcaaaga cacagaaaag 300
tactgtgccc ttgcacctaa tatgatggta acaaacaata ccttcacact caaaggcggt 360
gcaccaacaa aggttacttt tggtgatgac actgtgatag aagtgcaagg ttacaagagt 420
gtgaatatca cttttgaact tgatgaaagg attgataaag tacttaatga gaagtgctct 480
gcctatacag ttgaactcgg tacagaagta aatgagttcg cctgtgttgt ggcagatgct 540
gtcataaaaa ctttgcaacc agtatctgaa ttacttacac cactgggcat tgatttagat 600
gagtggagta tggctacata ctacttattt gatgagtctg gtgagtttaa attggcttca 660
catatgtatt gttctttcta ccctccagat gaggatgaag aagaaggcgg ccgc 714
<210> 105
<211> 714
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 105
ctcgagcaaa agatcgctga gattcctaaa gaggaagtta agccatttat aactgaaagt 60
aaaccttcag ttgaacagag aaaacaagat gataagaaaa tcaaagcttg tgttgaagaa 120
gttacaacaa ctctggaaga aactaagttc ctcacagaaa acttgttact ttatattgac 180
attaatggca atcttcatcc agattctgcc actcttgtta gtgacattga catcactttc 240
ttaaagaaag atgctccata tatagtgggt gatgttgttc aagagggtgt tttaactgct 300
gtggttatac ctactaaaaa ggctggtggc actactgaaa tgctagcgaa agctttgaga 360
aaagtgccaa cagacaatta tataaccact tacccgggtc agggtttaaa tggttacact 420
gtagaggagg caaagacagt gcttaaaaag tgtaaaagtg ccttttacat tctaccatct 480
attatctcta atgagaagca agaaattctt ggaactgttt cttggaattt gcgagaaatg 540
cttgcacatg cagaagaaac acgcaaatta atgcctgtct gtgtggaaac taaagccata 600
gtttcaacta tacagcgtaa atataagggt attaaaatac aagagggtgt ggttgattat 660
ggtgctagat tttactttta caccagtaaa acaactgtag cgtcacgcgg ccgc 714
<210> 106
<211> 714
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 106
ctcgagaact accgaagttg taggagacat tatacttaaa ccagcaaata atagtttaaa 60
aattacagaa gaggttggcc acacagatct aatggctgct tatgtagaca attctagtct 120
tactattaag aaacctaatg aattatctag agtattaggt ttgaaaaccc ttgctactca 180
tggtttagct gctgttaata gtgtcccttg ggatactata gctaattatg ctaagccttt 240
tcttaacaaa gttgttagta caactactaa catagttaca cggtgtttaa accgtgtttg 300
tactaattat atgccttatt tctttacttt attgctacaa ttgtgtactt ttactagaag 360
tacaaattct agaattaaag catctatgcc gactactata gcaaagaata ctgttaagag 420
tgtcggtaaa ttttgtctag aggcttcatt taattatttg aagtcaccta atttttctaa 480
actgataaat attataattt ggtttttact attaagtgtt tgcctaggtt ctttaatcta 540
ctcaaccgct gctttaggtg ttttaatgtc taatttaggc atgccttctt actgtactgg 600
ttacagagaa ggctatttga actctactaa tgtcactatt gcaacctact gtactggttc 660
tataccttgt agtgtttgtc ttagtggttt agattcttta gacaccgcgg ccgc 714
<210> 107
<211> 714
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 107
ctcgagcata agaaagctac atgatgagtt aacaggacac atgttagaca tgtattctgt 60
tatgcttact aatgataaca cttcaaggta ttgggaacct gagttttatg aggctatgta 120
cacaccgcat acagtcttac aggctgttgg ggcttgtgtt ctttgcaatt cacagacttc 180
attaagatgt ggtgcttgca tacgtagacc attcttatgt tgtaaatgct gttacgacca 240
tgtcatatca acatcacata aattagtctt gtctgttaat ccgtatgttt gcaatgctcc 300
aggttgtgat gtcacagatg tgactcaact ttacttagga ggtatgagct attattgtaa 360
atcacataaa ccacccatta gttttccatt gtgtgctaat ggacaagttt ttggtttata 420
taaaaataca tgtgttggta gcgataatgt tactgacttt aatgcaattg caacatgtga 480
ctggacaaat gctggtgatt acattttagc taacacctgt actgaaagac tcaagctttt 540
tgcagcagaa acgctcaaag ctactgagga gacatttaaa ctgtcttatg gtattgctac 600
tgtacgtgaa gtgctgtctg acagagaatt acatctttca tgggaagttg gtaaacctag 660
accaccactt aaccgaaatt atgtctttac tggttatcgt gtaactgcgg ccgc 714
<210> 108
<211> 714
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 108
ctcgagcaga cacttatgcc tgttggcatc attctattgg atttgattac gtctataatc 60
cgtttatgat tgatgttcaa caatggggtt ttacaggtaa cctacaaagc aaccatgatc 120
tgtattgtca agtccatggt aatgcacatg tagctagttg tgatgcaatc atgactaggt 180
gtctagctgt ccacgagtgc tttgttaagc gtgttgactg gactattgaa tatcctataa 240
ttggtgatga actgaagatt aatgcggctt gtagaaaggt tcaacacatg gttgttaaag 300
ctgcattatt agcagacaaa ttcccagttc ttcacgacat tggtaaccct aaagctatta 360
agtgtgtacc tcaagctgat gtagaatgga agttctatga tgcacagcct tgtagtgaca 420
aagcttataa aatagaagaa ttattctatt cttatgccac acattctgac aaattcacag 480
atggtgtatg cctattttgg aattgcaatg tcgatagata tcctgctaat tccattgttt 540
gtagatttga cactagagtg ctatctaacc ttaacttgcc tggttgtgat ggtggcagtt 600
tgtatgtaaa taaacatgca ttccacacac cagcttttga taaaagtgct tttgttaatt 660
taaaacaatt accatttttc tattactctg acagtccatg tgagtcgcgg ccgc 714
<210> 109
<211> 674
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 109
ctcgagatgt ttgtttttct tgttttattg ccactagtct ctagtcagtg tgttaatctt 60
acaaccagaa ctcaattacc ccctgcatac actaattctt tcacacgtgg tgtttattac 120
cctgacaaag ttttcagatc ctcagtttta cattcaactc aggacttgtt cttacctttc 180
ttttccaatg ttacttggtt ccatgctata catgtctctg ggaccaatgg tactaagagg 240
tttgataacc ctgtcctacc atttaatgat ggtgtttatt ttgcttccac tgagaagtct 300
aacataataa gaggctggat ttttggtact actttagatt cgaagaccca gtccctactt 360
attgttaata acgctactaa tgttgttatt aaagtctgtg aatttcaatt ttgtaatgat 420
ccatttttgg gtgtttatta ccacaaaaac aacaaaagtt ggatggaaag tgagttcaga 480
gtttattcta gtgcgaataa ttgcactttt gaatatgtct ctcagccttt tcttatggac 540
cttgaaggaa aacagggtaa tttcaaaaat cttagggaat ttgtgtttaa gaatattgat 600
ggttatttta aaatatattc taagcacacg cctattaatt tagtgcgtga tctccctcag 660
ggttttgcgg ccgc 674
<210> 110
<211> 1500
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 110
tggggaatgt ccaaattttg tatttccctt aaattccata atcaagacta ttcaaccaag 60
ggttgaaaag aaaaagcttg atggctttat gggtagaatt cgatctgtct atccagttgc 120
gtcaccaaat gaatgcaacc aaatgtgcct ttcaactctc atgaagtgtg atcattgtgg 180
tgaaacttca tggcagacgg gcgattttgt taaagccact tgcgaatttt gtggcactga 240
gaatttgact aaagaaggtg ccactacttg tggttactta ccccaaaatg ctgttgttaa 300
aatttattgt ccagcatgtc acaattcaga agtaggacct gagcatagtc ttgccgaata 360
ccataatgaa tctggcttga aaaccattct tcgtaagggt ggtcgcacta ttgcctttgg 420
aggctgtgtg ttctcttatg ttggttgcca taacaagtgt gcctattggg ttccacgtgc 480
tagcgctaac ataggttgta accatacagg tgttgttgga gaaggttccg aaggtcttaa 540
tgacaacctt cttgaaatac tccaaaaaga gaaagtcaac atcaatattg ttggtgactt 600
taaacttaat gaagagatcg ccattatttt ggcatctttt tctgcttcca caagtgcttt 660
tgtggaaact gtgaaaggtt tggattataa agcattcaaa caaattgttg aatcctgtgg 720
taattttaaa gttacaaaag gaaaagctaa aaaaggtgcc tggaatattg gtgaacagaa 780
atcaatactg agtcctcttt atgcatttgc atcagaggct gctcgtgttg tacgatcaat 840
tttctcccgc actcttgaaa ctgctcaaaa ttctgtgcgt gttttacaga aggccgctat 900
aacaatacta gatggaattt cacagtattc actgagactc attgatgcta tgatgttcac 960
atctgatttg gctactaaca atctagttgt aatggcctac attacaggtg gtgttgttca 1020
gttgacttcg cagtggctaa ctaacatctt tggcactgtt tatgaaaaac tcaaacccgt 1080
ccttgattgg cttgaagaga agtttaagga aggtgtagag tttcttagag acggttggga 1140
aattgttaaa tttatctcaa cctgtgcttg tgaaattgtc ggtggacaaa ttgtcacctg 1200
tgcaaaggaa attaaggaga gtgttcagac attctttaag cttgtaaata aatttttggc 1260
tttgtgtgct gactctatca ttattggtgg agctaaactt aaagccttga atttaggtga 1320
aacatttgtc acgcactcaa agggattgta cagaaagtgt gttaaatcca gagaagaaac 1380
tggcctactc atgcctctaa aagccccaaa agaaattatc ttcttagagg gagaaacact 1440
tcccacagaa gtgttaacag aggaagttgt cttgaaaact ggtgatttac aaccattaga 1500
<210> 111
<211> 500
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 111
aaggttacaa gagtgtgaat atcacttttg aacttgatga aaggattgat aaagtactta 60
atgagaagtg ctctgcctat acagttgaac tcggtacaga agtaaatgag ttcgcctgtg 120
ttgtggcaga tgctgtcata aaaactttgc aaccagtatc tgaattactt acaccactgg 180
gcattgattt agatgagtgg agtatggcta catactactt atttgatgag tctggtgagt 240
ttaaattggc ttcacatatg tattgttctt tctaccctcc agatgaggat gaagaagaag 300
gtgattgtga agaagaagag tttgagccat caactcaata tgagtatggt actgaagatg 360
attaccaagg taaacctttg gaatttggtg ccacttctgc tgctcttcaa cctgaagaag 420
agcaagaaga agattggtta gatgatgata gtcaacaaac tgttggtcaa caagacggca 480
gtgaggacaa tcagacaact 500
<210> 112
<211> 500
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 112
atatcaaatt tgctgatgat ttaaaccagt taactggtta taagaaacct gcttcaagag 60
agcttaaagt tacatttttc cctgacttaa atggtgatgt ggtggctatt gattataaac 120
actacacacc ctcttttaag aaaggagcta aattgttaca taaacctatt gtttggcatg 180
ttaacaatgc aactaataaa gccacgtata aaccaaatac ctggtgtata cgttgtcttt 240
ggagcacaaa accagttgaa acatcaaatt cgtttgatgt actgaagtca gaggacgcgc 300
agggaatgga taatcttgcc tgcgaagatc taaaaccagt ctctgaagaa gtagtggaaa 360
atcctaccat acagaaagac gttcttgagt gtaatgtgaa aactaccgaa gttgtaggag 420
acattatact taaaccagca aataatagtt taaaaattac agaagaggtt ggccacacag 480
atctaatggc tgcttatgta 500
<210> 113
<211> 500
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 113
caatggccac aaattatgat ttgagtgttg tcaatgccag attacgtgct aagcactatg 60
tgtacattgg cgaccctgct caattacctg caccacgcac attgctaact aagggcacac 120
tagaaccaga atatttcaat tcagtgtgta gacttatgaa aactataggt ccagacatgt 180
tcctcggaac ttgtcggcgt tgtcctgctg aaattgttga cactgtgagt gctttggttt 240
atgataataa gcttaaagca cataaagaca aatcagctca atgctttaaa atgttttata 300
agggtgttat cacgcatgat gtttcatctg caattaacag gccacaaata ggcgtggtaa 360
gagaattcct tacacgtaac cctgcttgga gaaaagctgt ctttatttca ccttataatt 420
cacagaatgc tgtagcctca aagattttgg gactaccaac tcaaactgtt gattcatcac 480
agggctcaga atatgactat 500
<210> 114
<211> 440
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 114
tactgtgatc tgggactaca aaagagatgc tccagcacat atatctacta ttggtgtttg 60
ttctatgact gacatagcca agaaaccaac tgaaacgatt tgtgcaccac tcactgtctt 120
ttttgatggt agagttgatg gtcaagtaga cttatttaga aatgcccgta atggtgttct 180
tattacagaa ggtagtgtta aaggtttaca accatctgta ggtcccaaac aagctagtct 240
taatggagtc acattaattg gagaagccgt aaaaacacag ttcaattatt ataagaaagt 300
tgatggtgtt gtccaacaat tacctgaaac ttactttact cagagtagaa atttacaaga 360
atttaaaccc aggagtcaaa tggaaattga tttcttagaa ttagctatgg atgaattcat 420
tgaacggtat aaattagaag 440
<210> 115
<211> 960
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 115
atgtttgttt ttcttgtttt attgccacta gtctctagtc agtgtgttaa tcttacaacc 60
agaactcaat taccccctgc atacactaat tctttcacac gtggtgttta ttaccctgac 120
aaagttttca gatcctcagt tttacattca actcaggact tgttcttacc tttcttttcc 180
aatgttactt ggttccatgc tatacatgtc tctgggacca atggtactaa gaggtttgat 240
aaccctgtcc taccatttaa tgatggtgtt tattttgctt ccactgagaa gtctaacata 300
ataagaggct ggatttttgg tactacttta gattcgaaga cccagtccct acttattgtt 360
aataacgcta ctaatgttgt tattaaagtc tgtgaatttc aattttgtaa tgatccattt 420
ttgggtgttt attaccacaa aaacaacaaa agttggatgg aaagtgagtt cagagtttat 480
tctagtgcga ataattgcac ttttgaatat gtctctcagc cttttcttat ggaccttgaa 540
ggaaaacagg gtaatttcaa aaatcttagg gaatttgtgt ttaagaatat tgatggttat 600
tttaaaatat attctaagca cacgcctatt aatttagtgc gtgatctccc tcagggtttt 660
tcggctttag aaccattggt agatttgcca ataggtatta acatcactag gtttcaaact 720
ttacttgctt tacatagaag ttatttgact cctggtgatt cttcttcagg ttggacagct 780
ggtgctgcag cttattatgt gggttatctt caacctagga cttttctatt aaaatataat 840
gaaaatggaa ccattacaga tgctgtagac tgtgcacttg accctctctc agaaacaaag 900
tgtacgttga aatccttcac tgtagaaaaa ggaatctatc aaacttctaa ctttagagtc 960
<210> 116
<211> 940
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 116
caaccaacag aatctattgt tagatttcct aatattacaa acttgtgccc ttttggtgaa 60
gtttttaacg ccaccagatt tgcatctgtt tatgcttgga acaggaagag aatcagcaac 120
tgtgttgctg attattctgt cctatataat tccgcatcat tttccacttt taagtgttat 180
ggagtgtctc ctactaaatt aaatgatctc tgctttacta atgtctatgc agattcattt 240
gtaattagag gtgatgaagt cagacaaatc gctccagggc aaactggaaa gattgctgat 300
tataattata aattaccaga tgattttaca ggctgcgtta tagcttggaa ttctaacaat 360
cttgattcta aggttggtgg taattataat tacctgtata gattgtttag gaagtctaat 420
ctcaaacctt ttgagagaga tatttcaact gaaatctatc aggccggtag cacaccttgt 480
aatggtgttg aaggttttaa ttgttacttt cctttacaat catatggttt ccaacccact 540
aatggtgttg gttaccaacc atacagagta gtagtacttt cttttgaact tctacatgca 600
ccagcaactg tttgtggacc taaaaagtct actaatttgg ttaaaaacaa atgtgtcaat 660
ttcaacttca atggtttaac aggcacaggt gttcttactg agtctaacaa aaagtttctg 720
cctttccaac aatttggcag agacattgct gacactactg atgctgtccg tgatccacag 780
acacttgaga ttcttgacat tacaccatgt tcttttggtg gtgtcagtgt tataacacca 840
ggaacaaata cttctaacca ggttgctgtt ctttatcagg atgttaactg cacagaagtc 900
cctgttgcta ttcatgcaga tcaacttact cctacttggc 940
<210> 117
<211> 960
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 117
gtgtttattc tacaggttct aatgtttttc aaacacgtgc aggctgttta ataggggctg 60
aacatgtcaa caactcatat gagtgtgaca tacccattgg tgcaggtata tgcgctagtt 120
atcagactca gactaattct cctcggcggg cacgtagtgt agctagtcaa tccatcattg 180
cctacactat gtcacttggt gcagaaaatt cagttgctta ctctaataac tctattgcca 240
tacccacaaa ttttactatt agtgttacca cagaaattct accagtgtct atgaccaaga 300
catcagtaga ttgtacaatg tacatttgtg gtgattcaac tgaatgcagc aatcttttgt 360
tgcaatatgg cagtttttgt acacaattaa accgtgcttt aactggaata gctgttgaac 420
aagacaaaaa cacccaagaa gtttttgcac aagtcaaaca aatttacaaa acaccaccaa 480
ttaaagattt tggtggtttt aatttttcac aaatattacc agatccatca aaaccaagca 540
agaggtcatt tattgaagat ctacttttca acaaagtgac acttgcagat gctggcttca 600
tcaaacaata tggtgattgc cttggtgata ttgctgctag agacctcatt tgtgcacaaa 660
agtttaacgg ccttactgtt ttgccacctt tgctcacaga tgaaatgatt gctcaataca 720
cttctgcact gttagcgggt acaatcactt ctggttggac ctttggtgca ggtgctgcat 780
tacaaatacc atttgctatg caaatggctt ataggtttaa tggtattgga gttacacaga 840
atgttctcta tgagaaccaa aaattgattg ccaaccaatt taatagtgct attggcaaaa 900
ttcaagactc actttcttcc acagcaagtg cacttggaaa acttcaagat gtggtcaacc 960
<210> 118
<211> 962
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 118
aaaatgcaca agctttaaac acgcttgtta aacaacttag ctccaatttt ggtgcaattt 60
caagtgtttt aaatgatatc ctttcacgtc ttgacaaagt tgaggctgaa gtgcaaattg 120
ataggttgat cacaggcaga cttcaaagtt tgcagacata tgtgactcaa caattaatta 180
gagctgcaga aatcagagct tctgctaatc ttgctgctac taaaatgtca gagtgtgtac 240
ttggacaatc aaaaagagtt gatttttgtg gaaagggcta tcatcttatg tccttccctc 300
agtcagcacc tcatggtgta gtcttcttgc atgtgactta tgtccctgca caagaaaaga 360
acttcacaac tgctcctgcc atttgtcatg atggaaaagc acactttcct cgtgaaggtg 420
tctttgtttc aaatggcaca cactggtttg taacacaaag gaatttttat gaaccacaaa 480
tcattactac agacaacaca tttgtgtctg gtaactgtga tgttgtaata ggaattgtca 540
acaacacagt ttatgatcct ttgcaacctg aattagactc attcaaggag gagttagata 600
aatattttaa gaatcataca tcaccagatg ttgatttagg tgacatctct ggcattaatg 660
cttcagttgt aaacattcaa aaagaaattg accgcctcaa tgaggttgcc aagaatttaa 720
atgaatctct catcgatctc caagaacttg gaaagtatga gcagtatata aaatggccat 780
ggtacatttg gctaggtttt atagctggct tgattgccat agtaatggtg acaattatgc 840
tttgctgtat gaccagttgc tgtagttgtc tcaagggctg ttgttcttgt ggatcctgct 900
gcaaatttga tgaagacgac tctgagccag tgctcaaagg agtcaaatta cattacacat 960
aa 962
<210> 119
<211> 228
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 119
atgtactcat tcgtttcgga agagacaggt acgttaatag ttaatagcgt acttcttttt 60
cttgctttcg tggtattctt gctagttaca ctagccatcc ttactgcgct tcgattgtgt 120
gcgtactgct gcaatattgt taacgtgagt cttgtaaaac cttcttttta cgtttactct 180
cgtgttaaaa atctgaattc ttctagagtt cctgatcttc tggtctaa 228
<210> 120
<211> 669
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 120
atggcagatt ccaacggtac tattaccgtt gaagagctta aaaagctcct tgaacaatgg 60
aacctagtaa taggtttcct attccttaca tggatttgtc ttctacaatt tgcctatgcc 120
aacaggaata ggtttttgta tataattaag ttaattttcc tctggctgtt atggccagta 180
actttagctt gttttgtgct tgctgctgtt tacagaataa attggatcac cggtggaatt 240
gctatcgcaa tggcttgtct tgtaggcttg atgtggctca gctacttcat tgcttctttc 300
agactgtttg cgcgtacgcg ttccatgtgg tcattcaatc cagaaactaa cattcttctc 360
aacgtgccac tccatggcac tattctgacc agaccgcttc tagaaagtga actcgtaatc 420
ggagctgtga tccttcgtgg acatcttcgt attgctggac accatctagg acgctgtgac 480
atcaaggacc tgcctaaaga aatcactgtt gctacatcac gaacgctttc ttattacaaa 540
ttgggagctt cgcagcgtgt agcaggtgac tcaggttttg ctgcatacag tcgctacagg 600
attggcaact ataaattaaa cacagaccat tccagtagca gtgacaatat tgctttgctt 660
gtacagtaa 669
<210> 121
<211> 1069
<212> DNA
<213> Artificial Sequence (Artificial Sequence)
<400> 121
taaattccct cgaggacaag gcgttccaat taacaccaat agcagtccag atgaccaaat 60
tggctactac cgaagagcta ccagacgaat tcgtggtggt gacggtaaaa tgaaagatct 120
cagtccaaga tggtatttct actacctagg aactgggcca gaagctggac ttccctatgg 180
tgctaacaaa gacggcatca tatgggttgc aactgaggga gccttgaata caccaaaaga 240
tcacattggc acccgcaatc ctgctaacaa tgctgcaatc gtgctacaac ttcctcaagg 300
aacaacattg ccaaaaggct tctacgcaga agggagcaga ggcggcagtc aagcctcttc 360
tcgttcctca tcacgtagtc gcaacagttc aagaaattca actccaggca gcagtagggg 420
aacttctcct gctagaatgg ctggcaatgg cggtgatgct gctcttgctt tgctgctgct 480
tgacagattg aaccagcttg agagcaaaat gtctggtaaa ggccaacaac aacaaggcca 540
aactgtcact aagaaatctg ctgctgaggc ttctaagaag cctcggcaaa aacgtactgc 600
cactaaagca tacaatgtaa cacaagcttt cggcagacgt ggtccagaac aaacccaagg 660
aaattttggg gaccaggaac taatcagaca aggaactgat tacaaacatt ggccgcaaat 720
tgcacaattt gcccccagcg cttcagcgtt cttcggaatg tcgcgcattg gcatggaagt 780
cacaccttcg ggaacgtggt tgacctacac agctgccatc aaattggatg acaaagatcc 840
aaatttcaaa gatcaagtca ttttgctgaa taagcatatt gacgcataca aaacattccc 900
accaacagag cctaaaaagg acaaaaagaa gaaggctgat gaaactcaag ccttaccgca 960
gagacagaag aaacagcaaa ctgtgactct tcttcctgct gcagatttgg atgatttctc 1020
caaacaattg caacaatcca tgagcagtgc tgactcaact caggcctaa 1069

Claims (3)

1. An siRNA, which consists of a sense strand and an antisense strand, wherein the sense strand is as shown in SEQ ID NO: 62, and the antisense strand is the nucleotide sequence shown as SEQ ID NO: 63;
wherein the content of the first and second substances,
sense strand 5'-CUAGUUAUCAGACUCAGACUA-3' (SEQ ID NO: 62),
antisense strand 5'-GUCUGAGUCUGAUAACUAGCG-3' (SEQ ID NO: 63);
the sense strand of the siRNA is SEQ ID NO: the 1 st, 2 nd, 3 rd, 19 th, 20 th and 21 th nucleotides of the 62 nucleotide sequence are all 2' -O-methyl ribonucleotides;
the phosphate groups between the 1 st, 2 nd and 3 rd nucleotides and the phosphate groups between the 19 th, 20 th and 21 th nucleotides of the nucleotide sequence of the sense strand of the siRNA are all phosphorothioate groups;
the 5' end of the sense strand of the siRNA is connected with cholesterol.
2. Use of the siRNA of claim 1 for the preparation of a medicament for the prevention and/or treatment of COVID-19.
3. A kit comprising the siRNA of claim 1, wherein said kit is functional for treating COVID-19.
CN202010746194.5A 2020-04-03 2020-04-03 Small interfering nucleic acid, composition and application Active CN111778253B (en)

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