CN111206046B - Transgenic expression vector for regulating grain color of brassica napus as well as construction method and application thereof - Google Patents
Transgenic expression vector for regulating grain color of brassica napus as well as construction method and application thereof Download PDFInfo
- Publication number
- CN111206046B CN111206046B CN201811308606.6A CN201811308606A CN111206046B CN 111206046 B CN111206046 B CN 111206046B CN 201811308606 A CN201811308606 A CN 201811308606A CN 111206046 B CN111206046 B CN 111206046B
- Authority
- CN
- China
- Prior art keywords
- rnai
- expression vector
- bnyb
- fragment
- transgenic expression
- Prior art date
- Legal status (The legal status is an assumption and is not a legal conclusion. Google has not performed a legal analysis and makes no representation as to the accuracy of the status listed.)
- Active
Links
- 239000013604 expression vector Substances 0.000 title claims abstract description 30
- 238000012250 transgenic expression Methods 0.000 title claims abstract description 27
- 230000001105 regulatory effect Effects 0.000 title claims abstract description 25
- 238000010276 construction Methods 0.000 title abstract description 9
- 240000002791 Brassica napus Species 0.000 title description 16
- 235000011293 Brassica napus Nutrition 0.000 title description 13
- 239000012634 fragment Substances 0.000 claims abstract description 37
- 240000007124 Brassica oleracea Species 0.000 claims abstract description 32
- 235000003899 Brassica oleracea var acephala Nutrition 0.000 claims abstract description 32
- 235000011301 Brassica oleracea var capitata Nutrition 0.000 claims abstract description 32
- 235000001169 Brassica oleracea var oleracea Nutrition 0.000 claims abstract description 32
- 230000009368 gene silencing by RNA Effects 0.000 claims abstract description 19
- 108091030071 RNAI Proteins 0.000 claims abstract description 18
- 230000001276 controlling effect Effects 0.000 claims abstract description 18
- 239000013612 plasmid Substances 0.000 claims abstract description 17
- 108090000623 proteins and genes Proteins 0.000 claims abstract description 16
- 239000002773 nucleotide Substances 0.000 claims abstract description 12
- 125000003729 nucleotide group Chemical group 0.000 claims abstract description 12
- 238000010367 cloning Methods 0.000 claims abstract description 4
- 101150095412 47 gene Proteins 0.000 claims description 20
- 238000000034 method Methods 0.000 claims description 20
- 238000006243 chemical reaction Methods 0.000 claims description 9
- 238000001514 detection method Methods 0.000 claims description 9
- 239000013598 vector Substances 0.000 claims description 9
- 230000000692 anti-sense effect Effects 0.000 claims description 7
- 230000033228 biological regulation Effects 0.000 claims description 7
- 108091008146 restriction endonucleases Proteins 0.000 claims description 6
- 238000001976 enzyme digestion Methods 0.000 claims description 5
- 241000588724 Escherichia coli Species 0.000 claims description 4
- 239000007788 liquid Substances 0.000 claims description 4
- 241000894006 Bacteria Species 0.000 claims description 3
- 102000012410 DNA Ligases Human genes 0.000 claims description 3
- 108010061982 DNA Ligases Proteins 0.000 claims description 3
- 239000002299 complementary DNA Substances 0.000 claims description 3
- 238000001962 electrophoresis Methods 0.000 claims description 3
- 239000012530 fluid Substances 0.000 claims description 3
- 230000009466 transformation Effects 0.000 claims description 3
- 230000009261 transgenic effect Effects 0.000 abstract description 19
- 230000001488 breeding effect Effects 0.000 abstract description 16
- 241000231392 Gymnosiphon Species 0.000 abstract description 15
- 238000009395 breeding Methods 0.000 abstract description 13
- 238000010353 genetic engineering Methods 0.000 abstract description 8
- 239000000463 material Substances 0.000 abstract description 8
- 230000002068 genetic effect Effects 0.000 abstract description 5
- 230000006872 improvement Effects 0.000 abstract description 5
- 238000012214 genetic breeding Methods 0.000 abstract description 3
- 230000001131 transforming effect Effects 0.000 abstract description 2
- 238000004458 analytical method Methods 0.000 description 15
- 229930003935 flavonoid Natural products 0.000 description 15
- 235000017173 flavonoids Nutrition 0.000 description 15
- 150000002215 flavonoids Chemical class 0.000 description 14
- 241000196324 Embryophyta Species 0.000 description 13
- 238000004895 liquid chromatography mass spectrometry Methods 0.000 description 8
- PFTAWBLQPZVEMU-ZFWWWQNUSA-N (+)-epicatechin Natural products C1([C@@H]2OC3=CC(O)=CC(O)=C3C[C@@H]2O)=CC=C(O)C(O)=C1 PFTAWBLQPZVEMU-ZFWWWQNUSA-N 0.000 description 6
- OKKJLVBELUTLKV-UHFFFAOYSA-N Methanol Chemical compound OC OKKJLVBELUTLKV-UHFFFAOYSA-N 0.000 description 6
- 230000009418 agronomic effect Effects 0.000 description 6
- 238000011161 development Methods 0.000 description 6
- 230000018109 developmental process Effects 0.000 description 6
- LPTRNLNOHUVQMS-UHFFFAOYSA-N epicatechin Natural products Cc1cc(O)cc2OC(C(O)Cc12)c1ccc(O)c(O)c1 LPTRNLNOHUVQMS-UHFFFAOYSA-N 0.000 description 6
- 235000012734 epicatechin Nutrition 0.000 description 6
- IYRMWMYZSQPJKC-UHFFFAOYSA-N kaempferol Chemical compound C1=CC(O)=CC=C1C1=C(O)C(=O)C2=C(O)C=C(O)C=C2O1 IYRMWMYZSQPJKC-UHFFFAOYSA-N 0.000 description 6
- PFTAWBLQPZVEMU-UKRRQHHQSA-N (-)-epicatechin Chemical compound C1([C@H]2OC3=CC(O)=CC(O)=C3C[C@H]2O)=CC=C(O)C(O)=C1 PFTAWBLQPZVEMU-UKRRQHHQSA-N 0.000 description 5
- 230000003321 amplification Effects 0.000 description 5
- 239000007789 gas Substances 0.000 description 5
- MWDZOUNAPSSOEL-UHFFFAOYSA-N kaempferol Natural products OC1=C(C(=O)c2cc(O)cc(O)c2O1)c3ccc(O)cc3 MWDZOUNAPSSOEL-UHFFFAOYSA-N 0.000 description 5
- 238000003199 nucleic acid amplification method Methods 0.000 description 5
- WRIDQFICGBMAFQ-UHFFFAOYSA-N (E)-8-Octadecenoic acid Natural products CCCCCCCCCC=CCCCCCCC(O)=O WRIDQFICGBMAFQ-UHFFFAOYSA-N 0.000 description 4
- LQJBNNIYVWPHFW-UHFFFAOYSA-N 20:1omega9c fatty acid Natural products CCCCCCCCCCC=CCCCCCCCC(O)=O LQJBNNIYVWPHFW-UHFFFAOYSA-N 0.000 description 4
- QSBYPNXLFMSGKH-UHFFFAOYSA-N 9-Heptadecensaeure Natural products CCCCCCCC=CCCCCCCCC(O)=O QSBYPNXLFMSGKH-UHFFFAOYSA-N 0.000 description 4
- CSCPPACGZOOCGX-UHFFFAOYSA-N Acetone Chemical compound CC(C)=O CSCPPACGZOOCGX-UHFFFAOYSA-N 0.000 description 4
- ZQPPMHVWECSIRJ-UHFFFAOYSA-N Oleic acid Natural products CCCCCCCCC=CCCCCCCCC(O)=O ZQPPMHVWECSIRJ-UHFFFAOYSA-N 0.000 description 4
- 239000005642 Oleic acid Substances 0.000 description 4
- REFJWTPEDVJJIY-UHFFFAOYSA-N Quercetin Chemical compound C=1C(O)=CC(O)=C(C(C=2O)=O)C=1OC=2C1=CC=C(O)C(O)=C1 REFJWTPEDVJJIY-UHFFFAOYSA-N 0.000 description 4
- 238000000540 analysis of variance Methods 0.000 description 4
- 230000015572 biosynthetic process Effects 0.000 description 4
- QXJSBBXBKPUZAA-UHFFFAOYSA-N isooleic acid Natural products CCCCCCCC=CCCCCCCCCC(O)=O QXJSBBXBKPUZAA-UHFFFAOYSA-N 0.000 description 4
- ZQPPMHVWECSIRJ-KTKRTIGZSA-N oleic acid Chemical compound CCCCCCCC\C=C/CCCCCCCC(O)=O ZQPPMHVWECSIRJ-KTKRTIGZSA-N 0.000 description 4
- 235000021313 oleic acid Nutrition 0.000 description 4
- 239000000049 pigment Substances 0.000 description 4
- 230000008569 process Effects 0.000 description 4
- PCMORTLOPMLEFB-ONEGZZNKSA-N sinapic acid Chemical compound COC1=CC(\C=C\C(O)=O)=CC(OC)=C1O PCMORTLOPMLEFB-ONEGZZNKSA-N 0.000 description 4
- 239000006228 supernatant Substances 0.000 description 4
- QAIPRVGONGVQAS-DUXPYHPUSA-N trans-caffeic acid Chemical compound OC(=O)\C=C\C1=CC=C(O)C(O)=C1 QAIPRVGONGVQAS-DUXPYHPUSA-N 0.000 description 4
- 108091032973 (ribonucleotides)n+m Proteins 0.000 description 3
- 235000004977 Brassica sinapistrum Nutrition 0.000 description 3
- UBSCDKPKWHYZNX-UHFFFAOYSA-N Demethoxycapillarisin Natural products C1=CC(O)=CC=C1OC1=CC(=O)C2=C(O)C=C(O)C=C2O1 UBSCDKPKWHYZNX-UHFFFAOYSA-N 0.000 description 3
- 230000014509 gene expression Effects 0.000 description 3
- 235000008777 kaempferol Nutrition 0.000 description 3
- UXOUKMQIEVGVLY-UHFFFAOYSA-N morin Natural products OC1=CC(O)=CC(C2=C(C(=O)C3=C(O)C=C(O)C=C3O2)O)=C1 UXOUKMQIEVGVLY-UHFFFAOYSA-N 0.000 description 3
- 150000008442 polyphenolic compounds Chemical class 0.000 description 3
- 235000013824 polyphenols Nutrition 0.000 description 3
- 239000011148 porous material Substances 0.000 description 3
- XLYOFNOQVPJJNP-UHFFFAOYSA-N water Substances O XLYOFNOQVPJJNP-UHFFFAOYSA-N 0.000 description 3
- JPFCOVZKLAXXOE-XBNSMERZSA-N (3r)-2-(3,5-dihydroxy-4-methoxyphenyl)-8-[(2r,3r,4r)-3,5,7-trihydroxy-2-(4-hydroxyphenyl)-3,4-dihydro-2h-chromen-4-yl]-3,4-dihydro-2h-chromene-3,5,7-triol Chemical compound C1=C(O)C(OC)=C(O)C=C1C1[C@H](O)CC(C(O)=CC(O)=C2[C@H]3C4=C(O)C=C(O)C=C4O[C@@H]([C@@H]3O)C=3C=CC(O)=CC=3)=C2O1 JPFCOVZKLAXXOE-XBNSMERZSA-N 0.000 description 2
- ACEAELOMUCBPJP-UHFFFAOYSA-N (E)-3,4,5-trihydroxycinnamic acid Natural products OC(=O)C=CC1=CC(O)=C(O)C(O)=C1 ACEAELOMUCBPJP-UHFFFAOYSA-N 0.000 description 2
- KSEBMYQBYZTDHS-HWKANZROSA-M (E)-Ferulic acid Natural products COC1=CC(\C=C\C([O-])=O)=CC=C1O KSEBMYQBYZTDHS-HWKANZROSA-M 0.000 description 2
- IJGRMHOSHXDMSA-UHFFFAOYSA-N Atomic nitrogen Chemical compound N#N IJGRMHOSHXDMSA-UHFFFAOYSA-N 0.000 description 2
- GQODBWLKUWYOFX-UHFFFAOYSA-N Isorhamnetin Natural products C1=C(O)C(C)=CC(C2=C(C(=O)C3=C(O)C=C(O)C=C3O2)O)=C1 GQODBWLKUWYOFX-UHFFFAOYSA-N 0.000 description 2
- 229920001991 Proanthocyanidin Polymers 0.000 description 2
- ZVOLCUVKHLEPEV-UHFFFAOYSA-N Quercetagetin Natural products C1=C(O)C(O)=CC=C1C1=C(O)C(=O)C2=C(O)C(O)=C(O)C=C2O1 ZVOLCUVKHLEPEV-UHFFFAOYSA-N 0.000 description 2
- HWTZYBCRDDUBJY-UHFFFAOYSA-N Rhynchosin Natural products C1=C(O)C(O)=CC=C1C1=C(O)C(=O)C2=CC(O)=C(O)C=C2O1 HWTZYBCRDDUBJY-UHFFFAOYSA-N 0.000 description 2
- 229930182475 S-glycoside Natural products 0.000 description 2
- 108091023040 Transcription factor Proteins 0.000 description 2
- 102000040945 Transcription factor Human genes 0.000 description 2
- DTOSIQBPPRVQHS-PDBXOOCHSA-N alpha-linolenic acid Chemical compound CC\C=C/C\C=C/C\C=C/CCCCCCCC(O)=O DTOSIQBPPRVQHS-PDBXOOCHSA-N 0.000 description 2
- 235000020661 alpha-linolenic acid Nutrition 0.000 description 2
- YZXBAPSDXZZRGB-DOFZRALJSA-N arachidonic acid Chemical compound CCCCC\C=C/C\C=C/C\C=C/C\C=C/CCCC(O)=O YZXBAPSDXZZRGB-DOFZRALJSA-N 0.000 description 2
- 235000004883 caffeic acid Nutrition 0.000 description 2
- 229940074360 caffeic acid Drugs 0.000 description 2
- 238000011088 calibration curve Methods 0.000 description 2
- QAIPRVGONGVQAS-UHFFFAOYSA-N cis-caffeic acid Natural products OC(=O)C=CC1=CC=C(O)C(O)=C1 QAIPRVGONGVQAS-UHFFFAOYSA-N 0.000 description 2
- -1 epicatechin glucoside Chemical class 0.000 description 2
- KSEBMYQBYZTDHS-HWKANZROSA-N ferulic acid Chemical compound COC1=CC(\C=C\C(O)=O)=CC=C1O KSEBMYQBYZTDHS-HWKANZROSA-N 0.000 description 2
- 235000001785 ferulic acid Nutrition 0.000 description 2
- 229940114124 ferulic acid Drugs 0.000 description 2
- KSEBMYQBYZTDHS-UHFFFAOYSA-N ferulic acid Natural products COC1=CC(C=CC(O)=O)=CC=C1O KSEBMYQBYZTDHS-UHFFFAOYSA-N 0.000 description 2
- 238000003306 harvesting Methods 0.000 description 2
- IPCSVZSSVZVIGE-UHFFFAOYSA-N hexadecanoic acid Chemical compound CCCCCCCCCCCCCCCC(O)=O IPCSVZSSVZVIGE-UHFFFAOYSA-N 0.000 description 2
- VKOBVWXKNCXXDE-UHFFFAOYSA-N icosanoic acid Chemical compound CCCCCCCCCCCCCCCCCCCC(O)=O VKOBVWXKNCXXDE-UHFFFAOYSA-N 0.000 description 2
- 230000005764 inhibitory process Effects 0.000 description 2
- 150000002500 ions Chemical class 0.000 description 2
- IZQSVPBOUDKVDZ-UHFFFAOYSA-N isorhamnetin Chemical compound C1=C(O)C(OC)=CC(C2=C(C(=O)C3=C(O)C=C(O)C=C3O2)O)=C1 IZQSVPBOUDKVDZ-UHFFFAOYSA-N 0.000 description 2
- 235000008800 isorhamnetin Nutrition 0.000 description 2
- 229960004488 linolenic acid Drugs 0.000 description 2
- KQQKGWQCNNTQJW-UHFFFAOYSA-N linolenic acid Natural products CC=CCCC=CCC=CCCCCCCCC(O)=O KQQKGWQCNNTQJW-UHFFFAOYSA-N 0.000 description 2
- 239000012046 mixed solvent Substances 0.000 description 2
- 238000012986 modification Methods 0.000 description 2
- 230000004048 modification Effects 0.000 description 2
- 238000001320 near-infrared absorption spectroscopy Methods 0.000 description 2
- 210000000056 organ Anatomy 0.000 description 2
- 235000005875 quercetin Nutrition 0.000 description 2
- 229960001285 quercetin Drugs 0.000 description 2
- 238000011160 research Methods 0.000 description 2
- 238000004626 scanning electron microscopy Methods 0.000 description 2
- 229930000044 secondary metabolite Natural products 0.000 description 2
- 230000008117 seed development Effects 0.000 description 2
- 238000012163 sequencing technique Methods 0.000 description 2
- PCMORTLOPMLEFB-UHFFFAOYSA-N sinapinic acid Natural products COC1=CC(C=CC(O)=O)=CC(OC)=C1O PCMORTLOPMLEFB-UHFFFAOYSA-N 0.000 description 2
- 239000000126 substance Substances 0.000 description 2
- 238000003786 synthesis reaction Methods 0.000 description 2
- 238000012360 testing method Methods 0.000 description 2
- WROMPOXWARCANT-UHFFFAOYSA-N tfa trifluoroacetic acid Chemical compound OC(=O)C(F)(F)F.OC(=O)C(F)(F)F WROMPOXWARCANT-UHFFFAOYSA-N 0.000 description 2
- 150000003569 thioglycosides Chemical class 0.000 description 2
- QURCVMIEKCOAJU-UHFFFAOYSA-N trans-isoferulic acid Natural products COC1=CC=C(C=CC(O)=O)C=C1O QURCVMIEKCOAJU-UHFFFAOYSA-N 0.000 description 2
- XFZJEEAOWLFHDH-UHFFFAOYSA-N (2R,2'R,3R,3'R,4R)-3,3',4',5,7-Pentahydroxyflavan(48)-3,3',4',5,7-pentahydroxyflavan Natural products C=12OC(C=3C=C(O)C(O)=CC=3)C(O)CC2=C(O)C=C(O)C=1C(C1=C(O)C=C(O)C=C1O1)C(O)C1C1=CC=C(O)C(O)=C1 XFZJEEAOWLFHDH-UHFFFAOYSA-N 0.000 description 1
- OYHQOLUKZRVURQ-NTGFUMLPSA-N (9Z,12Z)-9,10,12,13-tetratritiooctadeca-9,12-dienoic acid Chemical compound C(CCCCCCC\C(=C(/C\C(=C(/CCCCC)\[3H])\[3H])\[3H])\[3H])(=O)O OYHQOLUKZRVURQ-NTGFUMLPSA-N 0.000 description 1
- MMOPREBWKCZVPO-FFSXNKAYSA-N (e)-3-(4-hydroxyphenyl)prop-2-enoic acid Chemical compound OC(=O)\C=C\C1=CC=C(O)C=C1.OC(=O)\C=C\C1=CC=C(O)C=C1 MMOPREBWKCZVPO-FFSXNKAYSA-N 0.000 description 1
- HNSDLXPSAYFUHK-UHFFFAOYSA-N 1,4-bis(2-ethylhexyl) sulfosuccinate Chemical compound CCCCC(CC)COC(=O)CC(S(O)(=O)=O)C(=O)OCC(CC)CCCC HNSDLXPSAYFUHK-UHFFFAOYSA-N 0.000 description 1
- 101000662893 Arabidopsis thaliana Telomere repeat-binding factor 1 Proteins 0.000 description 1
- 101000662890 Arabidopsis thaliana Telomere repeat-binding factor 2 Proteins 0.000 description 1
- 101000662891 Arabidopsis thaliana Telomere repeat-binding factor 3 Proteins 0.000 description 1
- 101000662896 Arabidopsis thaliana Telomere repeat-binding factor 4 Proteins 0.000 description 1
- 101000662897 Arabidopsis thaliana Telomere repeat-binding factor 5 Proteins 0.000 description 1
- 235000011331 Brassica Nutrition 0.000 description 1
- 241000219198 Brassica Species 0.000 description 1
- DPUOLQHDNGRHBS-UHFFFAOYSA-N Brassidinsaeure Natural products CCCCCCCCC=CCCCCCCCCCCCC(O)=O DPUOLQHDNGRHBS-UHFFFAOYSA-N 0.000 description 1
- URXZXNYJPAJJOQ-UHFFFAOYSA-N Erucic acid Natural products CCCCCCC=CCCCCCCCCCCCC(O)=O URXZXNYJPAJJOQ-UHFFFAOYSA-N 0.000 description 1
- LFQSCWFLJHTTHZ-UHFFFAOYSA-N Ethanol Chemical compound CCO LFQSCWFLJHTTHZ-UHFFFAOYSA-N 0.000 description 1
- OEIJRRGCTVHYTH-UHFFFAOYSA-N Favan-3-ol Chemical compound OC1CC2=CC=CC=C2OC1C1=CC=CC=C1 OEIJRRGCTVHYTH-UHFFFAOYSA-N 0.000 description 1
- OYHQOLUKZRVURQ-HZJYTTRNSA-N Linoleic acid Chemical compound CCCCC\C=C/C\C=C/CCCCCCCC(O)=O OYHQOLUKZRVURQ-HZJYTTRNSA-N 0.000 description 1
- 239000004677 Nylon Substances 0.000 description 1
- 235000021314 Palmitic acid Nutrition 0.000 description 1
- CWEZAWNPTYBADX-UHFFFAOYSA-N Procyanidin Natural products OC1C(OC2C(O)C(Oc3c2c(O)cc(O)c3C4C(O)C(Oc5cc(O)cc(O)c45)c6ccc(O)c(O)c6)c7ccc(O)c(O)c7)c8c(O)cc(O)cc8OC1c9ccc(O)c(O)c9 CWEZAWNPTYBADX-UHFFFAOYSA-N 0.000 description 1
- MOJZMWJRUKIQGL-FWCKPOPSSA-N Procyanidin C2 Natural products O[C@@H]1[C@@H](c2cc(O)c(O)cc2)Oc2c([C@H]3[C@H](O)[C@@H](c4cc(O)c(O)cc4)Oc4c3c(O)cc(O)c4)c(O)cc(O)c2[C@@H]1c1c(O)cc(O)c2c1O[C@@H]([C@H](O)C2)c1cc(O)c(O)cc1 MOJZMWJRUKIQGL-FWCKPOPSSA-N 0.000 description 1
- 238000012228 RNA interference-mediated gene silencing Methods 0.000 description 1
- 238000009825 accumulation Methods 0.000 description 1
- XBJFCYDKBDVADW-UHFFFAOYSA-N acetonitrile;formic acid Chemical compound CC#N.OC=O XBJFCYDKBDVADW-UHFFFAOYSA-N 0.000 description 1
- 230000006978 adaptation Effects 0.000 description 1
- 238000000246 agarose gel electrophoresis Methods 0.000 description 1
- 238000007605 air drying Methods 0.000 description 1
- 238000000137 annealing Methods 0.000 description 1
- 229930002877 anthocyanin Natural products 0.000 description 1
- 235000010208 anthocyanin Nutrition 0.000 description 1
- 239000004410 anthocyanin Substances 0.000 description 1
- 150000004636 anthocyanins Chemical class 0.000 description 1
- 229940114079 arachidonic acid Drugs 0.000 description 1
- 235000021342 arachidonic acid Nutrition 0.000 description 1
- 230000001580 bacterial effect Effects 0.000 description 1
- 230000009286 beneficial effect Effects 0.000 description 1
- 230000008901 benefit Effects 0.000 description 1
- 230000008827 biological function Effects 0.000 description 1
- 230000031018 biological processes and functions Effects 0.000 description 1
- 229920002678 cellulose Polymers 0.000 description 1
- 239000001913 cellulose Substances 0.000 description 1
- 230000008859 change Effects 0.000 description 1
- 238000012512 characterization method Methods 0.000 description 1
- DKZBBWMURDFHNE-NSCUHMNNSA-N coniferyl aldehyde Chemical compound COC1=CC(\C=C\C=O)=CC=C1O DKZBBWMURDFHNE-NSCUHMNNSA-N 0.000 description 1
- 238000012937 correction Methods 0.000 description 1
- 238000012364 cultivation method Methods 0.000 description 1
- 238000005520 cutting process Methods 0.000 description 1
- 238000007405 data analysis Methods 0.000 description 1
- 238000004925 denaturation Methods 0.000 description 1
- 230000036425 denaturation Effects 0.000 description 1
- 238000001035 drying Methods 0.000 description 1
- 239000003480 eluent Substances 0.000 description 1
- 238000010828 elution Methods 0.000 description 1
- 230000007613 environmental effect Effects 0.000 description 1
- 210000002615 epidermis Anatomy 0.000 description 1
- DPUOLQHDNGRHBS-KTKRTIGZSA-N erucic acid Chemical compound CCCCCCCC\C=C/CCCCCCCCCCCC(O)=O DPUOLQHDNGRHBS-KTKRTIGZSA-N 0.000 description 1
- 238000000605 extraction Methods 0.000 description 1
- 229930182497 flavan-3-ol Natural products 0.000 description 1
- 238000007710 freezing Methods 0.000 description 1
- 230000008014 freezing Effects 0.000 description 1
- 239000011521 glass Substances 0.000 description 1
- 229930182478 glucoside Natural products 0.000 description 1
- 238000000227 grinding Methods 0.000 description 1
- 230000012010 growth Effects 0.000 description 1
- 238000011835 investigation Methods 0.000 description 1
- 150000002539 isorhamnetin derivatives Chemical class 0.000 description 1
- 150000002556 kaempferol derivatives Chemical class 0.000 description 1
- 229920005610 lignin Polymers 0.000 description 1
- 235000020778 linoleic acid Nutrition 0.000 description 1
- OYHQOLUKZRVURQ-IXWMQOLASA-N linoleic acid Natural products CCCCC\C=C/C\C=C\CCCCCCCC(O)=O OYHQOLUKZRVURQ-IXWMQOLASA-N 0.000 description 1
- 230000037356 lipid metabolism Effects 0.000 description 1
- 238000011068 loading method Methods 0.000 description 1
- 239000002932 luster Substances 0.000 description 1
- 238000007726 management method Methods 0.000 description 1
- 238000004519 manufacturing process Methods 0.000 description 1
- 238000004949 mass spectrometry Methods 0.000 description 1
- 230000007246 mechanism Effects 0.000 description 1
- 239000012528 membrane Substances 0.000 description 1
- 230000037353 metabolic pathway Effects 0.000 description 1
- 230000004060 metabolic process Effects 0.000 description 1
- 239000002207 metabolite Substances 0.000 description 1
- 238000002156 mixing Methods 0.000 description 1
- 230000009456 molecular mechanism Effects 0.000 description 1
- 239000000178 monomer Substances 0.000 description 1
- WQEPLUUGTLDZJY-UHFFFAOYSA-N n-Pentadecanoic acid Natural products CCCCCCCCCCCCCCC(O)=O WQEPLUUGTLDZJY-UHFFFAOYSA-N 0.000 description 1
- 229910052757 nitrogen Inorganic materials 0.000 description 1
- 229920001778 nylon Polymers 0.000 description 1
- 230000037361 pathway Effects 0.000 description 1
- 150000002989 phenols Chemical class 0.000 description 1
- 231100000614 poison Toxicity 0.000 description 1
- 239000000843 powder Substances 0.000 description 1
- 238000012257 pre-denaturation Methods 0.000 description 1
- 239000002244 precipitate Substances 0.000 description 1
- 230000019525 primary metabolic process Effects 0.000 description 1
- 238000012545 processing Methods 0.000 description 1
- HGVVOUNEGQIPMS-UHFFFAOYSA-N procyanidin Chemical compound O1C2=CC(O)=CC(O)=C2C(O)C(O)C1(C=1C=C(O)C(O)=CC=1)OC1CC2=C(O)C=C(O)C=C2OC1C1=CC=C(O)C(O)=C1 HGVVOUNEGQIPMS-UHFFFAOYSA-N 0.000 description 1
- 229920002414 procyanidin Polymers 0.000 description 1
- 239000000047 product Substances 0.000 description 1
- 102000004169 proteins and genes Human genes 0.000 description 1
- 150000003244 quercetin derivatives Chemical class 0.000 description 1
- 238000000985 reflectance spectrum Methods 0.000 description 1
- 230000024053 secondary metabolic process Effects 0.000 description 1
- 238000005507 spraying Methods 0.000 description 1
- 229910001220 stainless steel Inorganic materials 0.000 description 1
- 239000010935 stainless steel Substances 0.000 description 1
- 238000012916 structural analysis Methods 0.000 description 1
- 238000006467 substitution reaction Methods 0.000 description 1
- 210000001519 tissue Anatomy 0.000 description 1
- 239000003440 toxic substance Substances 0.000 description 1
- DKZBBWMURDFHNE-UHFFFAOYSA-N trans-coniferylaldehyde Natural products COC1=CC(C=CC=O)=CC=C1O DKZBBWMURDFHNE-UHFFFAOYSA-N 0.000 description 1
- 238000004704 ultra performance liquid chromatography Methods 0.000 description 1
- 230000017260 vegetative to reproductive phase transition of meristem Effects 0.000 description 1
- 238000005406 washing Methods 0.000 description 1
- 239000003643 water by type Substances 0.000 description 1
- 238000005303 weighing Methods 0.000 description 1
Images
Classifications
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/79—Vectors or expression systems specially adapted for eukaryotic hosts
- C12N15/82—Vectors or expression systems specially adapted for eukaryotic hosts for plant cells, e.g. plant artificial chromosomes (PACs)
- C12N15/8241—Phenotypically and genetically modified plants via recombinant DNA technology
- C12N15/8261—Phenotypically and genetically modified plants via recombinant DNA technology with agronomic (input) traits, e.g. crop yield
-
- C—CHEMISTRY; METALLURGY
- C12—BIOCHEMISTRY; BEER; SPIRITS; WINE; VINEGAR; MICROBIOLOGY; ENZYMOLOGY; MUTATION OR GENETIC ENGINEERING
- C12N—MICROORGANISMS OR ENZYMES; COMPOSITIONS THEREOF; PROPAGATING, PRESERVING, OR MAINTAINING MICROORGANISMS; MUTATION OR GENETIC ENGINEERING; CULTURE MEDIA
- C12N15/00—Mutation or genetic engineering; DNA or RNA concerning genetic engineering, vectors, e.g. plasmids, or their isolation, preparation or purification; Use of hosts therefor
- C12N15/09—Recombinant DNA-technology
- C12N15/63—Introduction of foreign genetic material using vectors; Vectors; Use of hosts therefor; Regulation of expression
- C12N15/66—General methods for inserting a gene into a vector to form a recombinant vector using cleavage and ligation; Use of non-functional linkers or adaptors, e.g. linkers containing the sequence for a restriction endonuclease
Landscapes
- Genetics & Genomics (AREA)
- Health & Medical Sciences (AREA)
- Life Sciences & Earth Sciences (AREA)
- Engineering & Computer Science (AREA)
- Zoology (AREA)
- Wood Science & Technology (AREA)
- Organic Chemistry (AREA)
- Biomedical Technology (AREA)
- Chemical & Material Sciences (AREA)
- Biotechnology (AREA)
- General Engineering & Computer Science (AREA)
- Molecular Biology (AREA)
- Bioinformatics & Cheminformatics (AREA)
- Microbiology (AREA)
- Physics & Mathematics (AREA)
- Plant Pathology (AREA)
- Biophysics (AREA)
- Biochemistry (AREA)
- General Health & Medical Sciences (AREA)
- Cell Biology (AREA)
- Measuring Or Testing Involving Enzymes Or Micro-Organisms (AREA)
Abstract
The invention belongs to the field of genetic engineering, and particularly relates to a transgenic expression vector for regulating and controlling the grain color of cabbage type rape, a construction method and application thereof, wherein the transgenic expression vector for regulating and controlling the grain color of the cabbage type rape is an RNAi-BnMYB47 transgenic expression vector, the nucleotide sequence of an RNAi fragment of the RNAi-BnMYB47 transgenic expression vector is shown as SEQ ID NO 1, and the transgenic expression vector is prepared by cloning the RNAi fragment of a BnMYB47 gene, then connecting with pFGC5941M plasmid, transforming and extracting plasmid. The RNAi fragment and the expression vector of the BnMYB47 gene provided by the invention can be applied to regulating and controlling the grain color of the cabbage type rape, overcomes the problems that the grain color character of the cabbage type rape is unstable, and stable yellow-seeded rape breeding is difficult to obtain, creates conditions for obtaining a new germplasm material of the cabbage type rape transgenic yellow seed with stable inheritance, and has important guiding significance for rape yellow seed breeding, genetic improvement of rape quality for genetic engineering and breeding practice.
Description
Technical Field
The invention belongs to the field of genetic engineering, and particularly relates to a transgenic expression vector for regulating and controlling the grain color of cabbage type rape as well as a construction method and application thereof.
Background
Rape is one of five oil crops in the world and plays an important role in oil crops in the world. The seeds are used as main harvesting organs of the rape, the seed coat accounts for about 10-20% of the dry weight of the seeds and 20-30% of the dry weight of the cake, and the seed coat is rich in pigments and polyphenol substances and can also seriously affect the oil quality and the feeding value of the cake. Therefore, improving the constitution of brassica napus seeds and increasing the oil content per unit area is one of the main goals of brassica napus breeding. The cabbage type yellow seed rape has the advantages of thin seed coat, high protein and oil content, high cake protein content, low content of toxic substances such as cellulose, pigment and the like, and becomes one of the important targets of rape breeding in recent years.
A large number of researches show that the change of the seed coat color of the cabbage type rape is mainly influenced by important secondary metabolites such as proanthocyanidin, polyphenol, lignin and derivatives thereof, and related genes controlling flavonoid synthetic pathways play an important role in the formation of the seed coat color. Flavonoid substances in seeds of brassica crops mainly comprise kaempferol derivatives, quercetin derivatives, isorhamnetin derivatives and epicatechin glucoside, and the flavonoid is also an important factor influencing the color and luster properties of seed coats. Due to the complexity of these material components, the flavonoid content of different plant seeds is also influenced by genotype and environmental conditions. As one of the largest transcription factors in plants, MYB transcription factor is widely involved in the regulation of various biological processes in plants, and plays a very important role in the growth and development processes of plants. Wherein R2R3-MYB transcription factors play an important role in the formation of the final color of tissues and organs through widely participating in various primary and secondary metabolic processes in the plant phenylpropane-flavonoid metabolic pathway. But the method is lack of natural yellow seed gene resources, has complex grain color inheritance mechanism and unstable characters, causes slow development of inheritance and molecular mechanism research, and is a main difficulty of stable yellow seed rape breeding.
Therefore, aiming at the difficulties, the invention discovers and discloses the biological function of the gene BnMYB47 in the aspect of regulating and controlling the grain color of the cabbage type rape, and determines the flavonoid component in the seed coat of the contrast and the transgenic line in different developmental stages by an LC-MS method, thereby defining the main reason of the color difference of the seed coat; through transcriptome sequencing and gene expression pattern analysis, the correlation that the BnYB 47 participates in regulating and controlling the differences of the brassica napus seed coats is revealed. The BnYB 47 transgenic vector and the construction method thereof provided by the invention have important guiding significance for yellow seed breeding of rape and genetic improvement and breeding practice of rape quality of genetic engineering.
Disclosure of Invention
In view of the above, one of the purposes of the present invention is to provide a RNAi-BnYB 47 transgenic expression vector for regulating the grain color of Brassica napus, which has important guiding significance for yellow seed breeding of Brassica napus, genetic improvement of Brassica napus quality in genetic engineering, and breeding practice.
In order to achieve the purpose, the technical scheme of the invention is as follows:
an RNAi-BnYB 47 transgenic expression vector for regulating grain color of cabbage type rape, wherein the nucleotide sequence of an RNAi fragment of the RNAi-BnYB 47 transgenic expression vector is shown as SEQ ID NO. 1.
Secondly, the second purpose of the invention is to provide a construction method of the RNAi-BnYB 47 transgenic expression vector for regulating and controlling the grain color of the cabbage type rape, and the RNAi-BnYB 47 transgenic expression vector can be accurately obtained through the construction method.
In order to achieve the purpose, the technical scheme of the invention is as follows:
the method for constructing the RNAi-BnYB 47 transgenic expression vector comprises the following steps:
1) Cloning of RNAi fragments of BnYB 47 gene: RNAi primers designed according to BnMYB47 gene and cDNA of oil 821 in cabbage type rape black seed strain are used as templates to carry out PCR reaction to obtain positive clones;
2) And (2) carrying out complete double enzyme digestion on a positive clone of the BnYB 47 gene connected with the interference fragment and a pFGC5941M plasmid by using restriction enzyme, respectively recovering an antisense fragment of the BnYB 47 gene and an open-loop pFGC5941M vector framework after electrophoretic detection, and connecting the recovered fragments overnight by using T4 DNA ligase. The obtained recombinant plasmid is transformed into an escherichia coli competent cell again, and a plasmid of a PCR positive clone bacterium liquid is extracted;
3) Carrying out complete double enzyme digestion on the plasmid obtained in the step 2), respectively recovering a sense fragment and an open-loop antisense fragment after electrophoresis detection and a vector skeleton recombined by pFGC5941M, carrying out connection transformation according to the same method, and carrying out multiple PCR detection on obtained clone germ fluid, wherein a positive clone is an RNAi-BnYB 47 transgenic expression vector.
Further, the forward primer in step 1) contains restriction sites BamHI + AatII, and the reverse primer contains restriction sites XbaI + NcoI.
Further, the nucleotide sequence of the forward primer of the primer in the step 1) is shown as SEQ ID NO. 2.
Further, in the step 1), the nucleotide sequence of the reverse primer is shown as SEQ ID NO. 3.
Further, the temperature for overnight ligation in step 2) was 16 ℃.
The invention also aims to provide application of RNAi fragments of BnMYB47 genes for regulating and controlling the grain color of cabbage type rape.
In order to achieve the purpose, the technical scheme of the invention is as follows:
the RNAi fragment of the BnMY 47 gene is applied to the regulation of the grain color of the brassica napus.
The fourth purpose of the invention provides another application of RNAi fragment of BnYB 47 gene for regulating and controlling grain color of cabbage type rape.
In order to achieve the purpose, the technical scheme of the invention is as follows:
the RNAi fragment of the BnMYB47 gene is applied to rape yellow seed breeding and genetic engineering to improve and breed the rape quality.
The fifth purpose of the invention is to provide the application of the RNAi-BnYB 47 transgenic expression vector for regulating and controlling the grain color of the cabbage type rape.
In order to realize the purpose, the technical scheme of the invention is as follows:
the RNAi-BnYB 47 transgenic expression vector is applied to the regulation of the grain color of the cabbage type rape.
The invention also aims to provide another application of the RNAi-BnYB 47 transgenic expression vector for regulating and controlling the grain color of the cabbage type rape.
In order to achieve the purpose, the technical scheme of the invention is as follows:
the RNAi-BnMYB47 transgenic expression vector is applied to rape yellow seed breeding and genetic improvement and breeding of rape quality in genetic engineering.
The invention has the beneficial effects that: the RNAi-BnYB 47 transgenic expression vector for regulating the grain color of the cabbage type rape can influence the color of the seed coat by regulating lipid metabolism, influencing the accumulation of pigments and polyphenols in the seed coat and regulating flavonoid metabolism. The method for constructing the RNAi-BnMYB47 transgenic expression vector can accurately obtain the expression vector, overcomes the problems that the grain color character of the cabbage type rape is unstable and stable yellow-seeded rape breeding is difficult to obtain by the expression vector, creates conditions for obtaining a new germplasm material of the cabbage type rape transgenic yellow seed with stable inheritance, and has important guiding significance for rape yellow seed breeding, genetic improvement of rape quality in genetic engineering and breeding practice.
Drawings
FIG. 1 control ZY821 and RNAi-BnYB 47 agronomic trait analysis;
FIG. 2 quality trait analysis of control ZY821 and RNAi-BnYB 47;
FIG. 3 phenotypic analysis of control ZY821 and RNAi-BnYB 47 seeds at different stages of development;
FIG. 4 epidermal structural analysis of mature seeds of control ZY821 and RNAi-BnYB 47.
Detailed Description
The examples are given for the purpose of better illustration of the invention, but the invention is not limited to the examples. Therefore, those skilled in the art can make insubstantial modifications and adaptations to the embodiments described above without departing from the scope of the present invention.
EXAMPLE 1 cloning of RNAi fragment of BnMY 47 Gene
RNAi primers are designed according to the result of multiple alignment of the obtained cabbage type rape grain color character BnMY 47 gene sequence (the accession number of ganbank is BnaAnng 36570D), wherein a forward primer contains restriction enzyme sites BamHI + AatII, a nucleotide sequence is shown in SEQ ID NO. 2, a reverse primer contains restriction enzyme sites XbaI + NcoI, and a nucleotide sequence is shown in SEQ ID NO. 3, and cDNA of oil 821 in a black cabbage type rape seed strain is used as a template for amplifying a BnM YB47 gene interference fragment from the cabbage type rape.
The amplification reaction system is shown in table 1, and the PCR reaction amplification procedure is: pre-denaturation at 94 ℃ for 2min → 35 amplification cycles (denaturation at 94 ℃ for 45s → annealing at 58 ℃ for 45s → extension at 72 ℃ for 1 min) → extension at 72 ℃ for 10min. Detecting the reaction amplification product by agarose gel electrophoresis, cutting and recovering the target fragment of the BnMYB47 gene, connecting the cut and recovered target fragment to a pMD19-T vector, transforming escherichia coli JM109 competent cells, delivering a PCR positive clone germ fluid to sample sequencing, and obtaining the nucleotide sequence of the BnYB 47 gene interference fragment shown as SEQ ID NO 1.
TABLE 1BnMYB47 gene interference fragment amplification reaction system
Example 2 construction and characterization of RNAi-BnMY 47 transgenic expression vectors
The plasmid extracted from the positive clone of BnMY 47 gene pMD19-T connected with the interference fragment and the plasmid pFGC5941M are completely double digested by restriction endonuclease NcoI + AatII, the antisense fragment of the BnYB 47 gene and the open-loop pFGC5941M vector framework are respectively recovered after electrophoretic detection, and the recovered fragments are connected at 16 ℃ overnight by T4 DNA ligase. The obtained recombinant plasmid is transformed into competent cells of Escherichia coli JM109 again, and a plasmid of a PCR positive clone bacterium liquid is extracted.
Extracting plasmid of positive clone of BnMY 47 gene pMD19-T connected with interference fragment and plasmid of antisense fragment recombined with pFGC5941 by restriction enzyme BamHI + XbaI, carrying out complete double enzyme digestion on the plasmid, recovering the vector skeleton of sense fragment and open-loop antisense fragment recombined with pFGC5941M after electrophoresis detection, carrying out connection transformation according to the same method, carrying out multiple PCR detection of BAR-sF + BAR-sR, F35S3ND + RNAi-F and RPA3NDR + RNAi-R on obtained clone bacterial liquid, and obtaining the positive clone which is the RNA interference vector of cabbage type rape yellow seed character BnYB 47 gene.
Example 3 regulating action of RNAi-BnMYB47 transgenic plant on cabbage type rape grain color
3.1 investigation of agronomic traits of RNAi-BnYB 47 transgenic plants and control plants and determination of quality traits of RNAi-BnYB 47 transgenic families and control seeds
The RNAi-BnYB 47 transgenic T3 generation family and the black seed strain ZY821 material are sowed at the same time, the seedlings are transplanted, and the cultivation and management method is the same as the field production. After the strains are matured, 10 strains of the strains are selected for testing the seeds according to a rape seed testing method. Respectively recording the character indexes of each plant height (cm), the length (cm) of the main inflorescence, the quantity (number) of siliques of the main inflorescence, the one-time branch height (cm), the one-time branch quantity (number), the length (cm) of the siliques, the thousand seed weight (g) and the like, and carrying out data analysis.
The plant height refers to the length from the cotyledonary node to the highest part of the whole plant and is marked as 'cm'; the length of the main inflorescence is the length from the top end of the main inflorescence to the base of the main inflorescence and is marked as 'cm'; the silique number of the main inflorescence refers to the silique number of more than one full or under-full seed on the main inflorescence, and is marked as 'one'; the length from the first effective branch point to the cotyledonary node is marked as 'cm'; the number of primary branches refers to the number of primary branches with more than one effective silique on the main stem, and is marked as 'one'; the silique length is the average length from the base of the silique to the top of the silique and is reported as "cm"; thousand seeds are the 1000 randomly picked seeds after harvest and after natural air drying (the water content is not higher than 9%), and are marked as 'g'.
Near Infrared Reflectance Spectroscopy (NIRS) scanning is an analytical technique that can rapidly detect seed quality traits without damage to the seeds being tested. Quality traits of RNAi-BnMYB47 transgenic T3 generation and black seed strain ZY821 material seeds, oil content, protein content, high oleic acid, arachidic acid, yellow seed R value, erucic acid, thioglycoside, linolenic acid, linoleic acid, oleic acid and palmitic acid, etc., were measured by using NIR System 6500. 5g of whole rape seed was taken for each sample and placed in a cuvet, and the transgenic RNAi-BnYB 47 was scanned three times, five times (one interval of reflectance spectra 400-2500nm and 2nm) against ZY821, recorded separately, and averaged. The used correction model is developed by rape engineering center in Chongqing city. Finally, the phenotype data obtained from the model are statistically analyzed.
In terms of agronomic traits, except for the length of the silique, the RNAi-BnMYB47 transgenic plants have insignificant difference in agronomic traits such as the number of primary branches, plant height, length of main inflorescence, the number of main inflorescence siliques, thousand kernel weight and primary branch height (figure 1, table 2 and table 3); the near-infrared model is used for analyzing the quality and characters of the transgenic strains RNAi-BnYB 47, and the RNAi-BnYB 47 strains have no significant difference in seed protein content, thioglycoside, arachidonic acid content, linolenic acid content and the like, and have significant difference in yellow seed content, oil content, oleic acid content and linoleic acid content (figure 2, table 4 and table 5). The inhibition of the expression of the BnYB 47 gene is proved to play a certain role in regulating and controlling the oil content, the oleic acid and other quality characters of the brassica napus besides obviously influencing the yellow seed number of the brassica napus.
TABLE 2 analysis of variance of agronomic traits for RNAi-BnMY 47-1
* Correlation at the 0.05 level
TABLE 3 analysis of variance of agronomic traits for RNAi-BnMY 47-2
* Correlation at the 0.05 level
TABLE 4 analysis of variance of seed quality traits for RNAi-BnMY 47-1
* Correlation at 0.01 level
TABLE 5 analysis of variance of seed quality traits for RNAi-BnMY 47-2
* Correlation at 0.01 level
3.2 phenotypic analysis of transgenic lines RNAi-BnMY 47 and control seed development
Seeds of different developmental stages of transgenic pedigrees RNAi-BnYB 47 and black seed ZY821 were observed and photographically recorded by Olympus MVX10 stereoscope.
The seed coat structure of the mature seeds of transgenic inbred RNAi-BnYB 47 and black seed ZY821 was analyzed by SU3500 Scanning Electron microscopy Scanning Electron microscopy.
The RNAi-BnYB 47 seeds and the ZY821 seeds in different development periods are observed by using a stereoscope, and the RNAi-BnYB 47 seeds have similar color in the early stage compared with the control ZY821 seeds, the RNAi-BnYB 47 seeds in the middle and later stages are colored later than the control ZY821 seeds, while the RNAi-BnYB 47 seeds in the later stage have obviously lighter color than the ZY821 seeds, the ZY821 seeds are dark brown black, and the RNAi-BnYB 47 seeds are light yellow (figure 3); meanwhile, the seed coat structures of the mature RNAi-BnMYB47 seeds and the mature ZY821 seeds are analyzed by a scanning electron microscope, and the result shows that a plurality of pores similar to leaf pores are formed in the epidermis of the mature seeds, and compared with the control ZY821 seeds, the diameters of the pores on the surfaces of the mature seeds of RNAi-BnYB 47 are smaller, and the cells are compact (figure 4). The observation result of combining a stereoscope and a scanning electron microscope can show that the BnYB 47 gene can participate in the forming process of regulating and controlling the color of the seed coat of the cabbage type rape, the regulation and control degrees in different periods are inconsistent, the BnYB 47 gene can directly participate in the forming process of regulating and controlling the color of the seed coat of the cabbage type rape, and the BnYB 47 gene can be used as a regulation and control factor to regulate and control the color of the seed coat of the cabbage type rape by regulating and controlling one or more genes in the pigment synthesis process. In addition, the hole diameter of the mature RNAi-BnYB 47 seed surface is reduced, the cells are compact, and the inhibition of the expression of BnYB 47 genes can influence the structure of seed coats.
3.3 transgenic lines RNAi-BnMYB47 and control seed coat flavonoid component LC-MS analysis
3.3.1 extraction of Total Flavonoids from transgenic pedigree RNAi-BnMY 47 and control seed coat
(1) Fully freezing and drying fresh seed coat materials in different development stages, loading into an EP tube containing stainless steel balls, and fully oscillating and grinding on a high-speed oscillator;
(2) Weighing 5mg of the fully ground powder into a 5ml glass tube, adding a 1ml mixed solvent of methanol: acetone: water: trifluoroacetic acid (TFA) (40;
(3) Performing ultrasonic disruption treatment at 4 deg.C for 15min, centrifuging at 19000 Xg for 5min, sucking supernatant to clean 2ml EP tube, and storing the obtained sample supernatant at-80 deg.C;
(4) Adding 1ml of a mixed solvent of methanol, acetone, water, trifluoroacetic acid (TFA) (40;
(5) Centrifuging at 19000 Xg for 5min, sucking supernatant, mixing the two supernatants, storing at-80 deg.C in refrigerator, waiting for LC-MS analysis, and storing the precipitate at-80 deg.C for subsequent determination of proanthocyanidin content.
3.3.2 transgenic pedigree RNAi-BnMYB47 and control seed coat flavonoid component LC-MS analysis
LC-MS analysis in Dionex Ulti Mate TM 3000UHPLC systems (Thermo Fisher Scientific, USA), the method can be referred to (Auger et al, 2010), and the specific method is as follows:
(1) All samples were filtered through nylon membranes (0.22 μm, memberan, GER) before analysis, and then 200 μ l of each sample was pipetted into a clean sample tube;
(2) Each sample was sampled in an amount of 5. Mu.l and was separated on an ACQUITY UPLC BEH C18 column (2.1X 150mm,1.7 μm; waters, USA) before entering the mass spectrometer, eluent A was 0.1% acetonitrile formate. The elution gradient is 5-9% A,5min;9% by weight of A-16% by weight of A,10min;16% by weight of A-50% by weight of A,25min;50% of A to 95% of A,15min;95% A,5min, followed by column washing and rebalancing;
(3) Mass spectrometry in Thermo Scientific TM Q-Exactive TM Performed on a mass spectrometer equipped with a HESI source and operated in negative ion mode. The source working parameters are spraying voltage, 3 kV; sheath gas flow rate, 35 units; flow rate of auxiliary gas, 10 units; capillary temperature, 350 ℃; the temperature of an auxiliary gas heater is 300 ℃; nitrogen is used as sheath gas and auxiliary gas;
(4) The major flavonoids were first identified by full MS mode analysis and then MS2 analysis was performed on the selected m/z ions. Data acquisition and subsequent processing analysis used Thermo Xcalibur 3.0.63 (Thermo Fisher Scientific). The flavan-3-ol and soluble PAs extract (procyanidin monomer consisting of flavan-3 alcohol) content is expressed as epicatechin equivalents, relative to the calibration curve for epicatechin, i.e., equivalent μ g of epicotechin per mg of dry weight (μ g EC equiv/mg DW). The content of other phenolic compounds is finally expressed as relative content to the corresponding calibration curve of available standards including p-coumaric acid (p-coumaric acid), caffeic acid (caffeic acid), ferulic acid (ferulic acid), epicatechin (epicatechin), quercetin (quercetin), kaempferol (kaempferol) and isorhamnetin (purchased from PureChem-Standard co., ltd, chengdu, china), as well as sinapic acid (sinapic acid) and coniferyl aldehyde (purchased from Sigma-Aldrich).
LC-MS is utilized to determine the flavonoid components in the seed coats of the control ZY821 and the transgenic line RNAi-BnMYB47 in different development periods, and 27 main flavonoid components are detected in total, wherein the main flavonoid components mainly comprise secondary metabolites such as epicatechin, kaempferol, isorhamnetin, anthocyanin and derivatives thereof (Table 6). Indicating that BnYB 47 may be involved in the synthesis of these metabolites.
TABLE 6 LC-MS identification of major flavonoid component in seed coat during Brassica napus seed development
Finally, the above embodiments are only for illustrating the technical solutions of the present invention and not for limiting, although the present invention has been described in detail with reference to the preferred embodiments, it should be understood by those skilled in the art that modifications or equivalent substitutions may be made to the technical solutions of the present invention without departing from the spirit and scope of the technical solutions of the present invention, and all of them should be covered in the claims of the present invention.
Sequence listing
<110> university of southwest
<120> transgenic expression vector for regulating and controlling grain color of brassica napus as well as construction method and application thereof
<160> 3
<170> SIPOSequenceListing 1.0
<210> 1
<211> 499
<212> RNA
<213> Artificial sequence (Artificial sequence)
<400> 1
cgacgggatg aagaaaggag agtggacggc ggaggaagat caaaaccttg tcgcttacat 60
caatgagcat ggggtctctg attggcgttc tctccccaaa agagctggtt tgcagagatg 120
tggaaagagc tgcaggttaa ggtggcttaa ttacctaagg cctgggatta aaagaggcaa 180
attcactcct caggaagaag aagagatcat caaacttcat gctgtcctcg gaaacaggtg 240
ggcagctatt gccaaggaga tggataatcg aacagacaac gacatcaaga accattggaa 300
ctcttgtctc aagaaaagac tgtcgaggaa aggaattgac ccgatgaccc acgagcctat 360
catcaataac ctcaccgtca cgatcactaa cgaagaatgt ggtagctctt caataactac 420
attttctcct acctcatcac cttccggctc ggcttgtctc ctgaacaagc tcgccacagg 480
tatctcatct agacaacat 499
<210> 2
<211> 38
<212> RNA
<213> Artificial sequence (Artificial sequence)
<400> 2
ctggatccga cgtccgacgg gatgaagaaa ggagagtg 38
<210> 3
<211> 41
<212> RNA
<213> Artificial sequence (Artificial sequence)
<400> 3
agtctagacc atggatgttg tctagatgag atacctgtgg c 41
Claims (7)
1. The method for constructing the RNAi-BnYB 47 transgenic expression vector for regulating and controlling the grain color of the cabbage type rape is characterized by comprising the following steps of:
1) Cloning of RNAi fragment of BnYB 47 gene: RNAi primers designed according to BnMYB47 genes and cDNA of oil 821 in the cabbage type rape black seed strain are used as templates to carry out PCR reaction to obtain positive clones; the nucleotide sequence of RNAi fragment of BnMY 47 gene is shown in SEQ ID NO 1;
2) Carrying out complete double enzyme digestion on a positive clone of a BnMY 47 gene connected with an interference fragment and a pFGC5941M plasmid by using restriction enzyme, respectively recovering an antisense fragment of the BnYB 47 gene and an open-loop pFGC5941M vector skeleton after electrophoretic detection, connecting the recovered fragments overnight by using T4 DNA ligase, re-transforming escherichia coli competent cells by using the obtained recombinant plasmid, and extracting a PCR positive clone bacterium liquid plasmid;
3) Carrying out complete double enzyme digestion on the plasmid obtained in the step 2), respectively recovering a sense fragment and an open-loop antisense fragment after electrophoresis detection and a vector skeleton recombined by pFGC5941M, carrying out connection transformation according to the same method, and carrying out multiple PCR detection on obtained clone germ fluid, wherein a positive clone is an RNAi-BnYB 47 transgenic expression vector.
2. The method according to claim 1, wherein the PCR reaction in step 1) is carried out using a forward primer containing the restriction sites BamHI + AatII and a reverse primer containing the restriction sites XbaI + NcoI.
3. The method according to claim 2, wherein the nucleotide sequence of the forward primer for performing the PCR reaction in step 1) is shown as SEQ ID NO. 2.
4. The method according to claim 2, wherein the nucleotide sequence of the reverse primer for the PCR reaction in step 1) is shown in SEQ ID NO. 3.
5. The method of claim 1, wherein the overnight ligation temperature in step 2) is 16 ℃.
An application of RNAi fragment of BnMYB47 gene in regulation of cabbage type rape grain color, wherein the nucleotide sequence of the RNAi fragment is shown as SEQ ID NO. 1.
And 7, application of the RNAi-BnYB 47 transgenic expression vector in regulation of the grain color of the cabbage type rape, wherein the nucleotide sequence of an RNAi fragment of the RNAi-BnYB 47 transgenic expression vector is shown as SEQ ID NO. 1.
Priority Applications (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN201811308606.6A CN111206046B (en) | 2018-11-05 | 2018-11-05 | Transgenic expression vector for regulating grain color of brassica napus as well as construction method and application thereof |
Applications Claiming Priority (1)
Application Number | Priority Date | Filing Date | Title |
---|---|---|---|
CN201811308606.6A CN111206046B (en) | 2018-11-05 | 2018-11-05 | Transgenic expression vector for regulating grain color of brassica napus as well as construction method and application thereof |
Publications (2)
Publication Number | Publication Date |
---|---|
CN111206046A CN111206046A (en) | 2020-05-29 |
CN111206046B true CN111206046B (en) | 2023-04-11 |
Family
ID=70781873
Family Applications (1)
Application Number | Title | Priority Date | Filing Date |
---|---|---|---|
CN201811308606.6A Active CN111206046B (en) | 2018-11-05 | 2018-11-05 | Transgenic expression vector for regulating grain color of brassica napus as well as construction method and application thereof |
Country Status (1)
Country | Link |
---|---|
CN (1) | CN111206046B (en) |
Families Citing this family (3)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
CN111235159B (en) * | 2018-11-27 | 2022-10-04 | 西南大学 | Application of MYB61 gene in cabbage type rape grain color breeding |
CN113444741B (en) * | 2021-06-30 | 2022-05-20 | 西南大学 | Application of expression lowering Bna-miR168a in improvement of rape traits |
PL438703A1 (en) * | 2021-08-06 | 2023-02-13 | Uniwersytet Jagielloński | Promoter activated by MYB47 and MYB95 proteins and an expression system containing it |
Citations (5)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP2090662A2 (en) * | 2006-04-05 | 2009-08-19 | Metanomics GmbH | Process for the production of a fine chemical |
CN101942455A (en) * | 2010-09-15 | 2011-01-12 | 西南大学 | TT16 gene families of brassica napus and parental species celery cabbage and cabbage of same as well as application thereof |
CN101942458A (en) * | 2010-09-15 | 2011-01-12 | 西南大学 | Gene families of cabbage type rape, parental species Chinese cabbage and cabbage AHA10 thereof and applications thereof |
CN110777164A (en) * | 2019-11-20 | 2020-02-11 | 扬州大学 | Method for obtaining Brassica napus yellow seed germplasm based on CRISPR/Cas9 technology |
CN111235159A (en) * | 2018-11-27 | 2020-06-05 | 西南大学 | Application of MYB61 gene in cabbage type rape grain color breeding |
Family Cites Families (1)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
US20110099668A1 (en) * | 2007-05-01 | 2011-04-28 | Jasbir Singh | Expressing GLK in plants |
-
2018
- 2018-11-05 CN CN201811308606.6A patent/CN111206046B/en active Active
Patent Citations (5)
Publication number | Priority date | Publication date | Assignee | Title |
---|---|---|---|---|
EP2090662A2 (en) * | 2006-04-05 | 2009-08-19 | Metanomics GmbH | Process for the production of a fine chemical |
CN101942455A (en) * | 2010-09-15 | 2011-01-12 | 西南大学 | TT16 gene families of brassica napus and parental species celery cabbage and cabbage of same as well as application thereof |
CN101942458A (en) * | 2010-09-15 | 2011-01-12 | 西南大学 | Gene families of cabbage type rape, parental species Chinese cabbage and cabbage AHA10 thereof and applications thereof |
CN111235159A (en) * | 2018-11-27 | 2020-06-05 | 西南大学 | Application of MYB61 gene in cabbage type rape grain color breeding |
CN110777164A (en) * | 2019-11-20 | 2020-02-11 | 扬州大学 | Method for obtaining Brassica napus yellow seed germplasm based on CRISPR/Cas9 technology |
Non-Patent Citations (3)
Title |
---|
Physiological and Transcriptional Analyses Reveal Differential Phytohormone Responses to Boron Deficiency in Brassica napus Genotypes;Zhou 等;《frontiers in Plant Science》;20160226;第7卷;第1-16页 * |
甘蓝型油菜转录因子bnmyb47粒色调控机制研究;朱美晨;《中国知网》;20200528;第1-78页 * |
甘蓝型黄籽油菜粒色的遗传分析;王瑞 等;《中国油料作物学报》;20031230;第25卷(第4期);第1-4页 * |
Also Published As
Publication number | Publication date |
---|---|
CN111206046A (en) | 2020-05-29 |
Similar Documents
Publication | Publication Date | Title |
---|---|---|
Singh et al. | Gibberellin promotes sweetpotato root vascular lignification and reduces storage-root formation | |
CN111206046B (en) | Transgenic expression vector for regulating grain color of brassica napus as well as construction method and application thereof | |
Lu et al. | OsPIN5b modulates rice (Oryza sativa) plant architecture and yield by changing auxin homeostasis, transport and distribution | |
Zhao et al. | Studies on the rice LEAF INCLINATION1 (LC1), an IAA–amido synthetase, reveal the effects of auxin in leaf inclination control | |
US7402428B2 (en) | Modification of plant lignin content | |
Yamauchi et al. | Ethylene biosynthesis is promoted by very-long-chain fatty acids during lysigenous aerenchyma formation in rice roots | |
US7807880B2 (en) | Modification of plant lignin content | |
Ma et al. | The pepper MYB transcription factor CaMYB306 accelerates fruit coloration and negatively regulates cold resistance | |
Yin et al. | Two types of cinnamoyl-CoA reductase function divergently in accumulation of lignins, flavonoids and glucosinolates and enhance lodging resistance in Brassica napus | |
Yoshida et al. | Insight into chemical mechanisms of sepal color development and variation in hydrangea | |
CN105441396A (en) | Eggplant constitutively photomorphogenic SmCOP1 protein and coding gene thereof | |
Chen et al. | The bZIP transcription factor MpbZIP9 regulates anthocyanin biosynthesis in Malus ‘Pinkspire’fruit | |
CN110669771A (en) | Cucumber CsLsi2 gene and its coded protein and application | |
CN113583990B (en) | Rice full-fertility half-dwarf phenotype regulatory gene SD38 and application thereof | |
Johnson et al. | Regulation of phytochrome message abundance in root caps of maize: spatial, environmental, and genetic specificity | |
CN113699163B (en) | Rice premature senility dwarf gene ESD1 and application thereof | |
CN116254272A (en) | Application of gene OsPIN10b in plant root elongation | |
CN110923246A (en) | Tobacco NtMYB12 gene and application thereof in regulation and control of fatty acid synthesis | |
CN113969293A (en) | Crop phosphorus high-efficiency and high-yield gene and application thereof | |
CN114807217B (en) | Application of CNR gene and protein encoded by CNR gene in regulation and control of flavonoid compound synthesis in plant fruits | |
CN114605511B (en) | Cloning and application of novel tobacco amine efflux gene | |
Yin et al. | Cinnamoyl-CoA Reductase 1 (CCR1) and CCR2 Function Divergently in Tissue Lignification, Flux Control and Cross-talk with Glucosinolate Pathway in Brassica napus | |
CN117535312B (en) | Application of vacuole membrane anion channel protein in regulation and control of carbon-nitrogen balance of corn | |
Liu et al. | DDG1 and G protein α subunit RGA1 interaction regulates plant height and senescence in rice (Oryza sativa). | |
CN107557370B (en) | Application of rice REL1 gene in improving drought stress resistance of plants |
Legal Events
Date | Code | Title | Description |
---|---|---|---|
PB01 | Publication | ||
PB01 | Publication | ||
SE01 | Entry into force of request for substantive examination | ||
SE01 | Entry into force of request for substantive examination | ||
GR01 | Patent grant | ||
GR01 | Patent grant |